View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15112_low_16 (Length: 270)
Name: NF15112_low_16
Description: NF15112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15112_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 10980329 - 10980507
Alignment:
| Q |
19 |
tcaacactgaacaataagtagacgtgaaggatgagaatggaggtagttggaaaaacagcgccagtgaacattaattaataacagtaccacagataacaac |
118 |
Q |
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| T |
10980329 |
tcaacactgaacaataagtagacgtgaaggatgagaatggaggtagttggaaaaacagcgccagtgaacattaattaataacagtaccacagatagcaac |
10980428 |
T |
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| Q |
119 |
agcagagtgaactcaatctatgtcaaatataaataaaaaatatatctatattattttatggtctgtgtgtaaataaatgtaa |
200 |
Q |
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| T |
10980429 |
agcag---gaactcaatctatgtcaaatataaataaaaaatatatctatattattttatggtctgtgtgtaaataaatgtaa |
10980507 |
T |
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