View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15113_low_10 (Length: 300)
Name: NF15113_low_10
Description: NF15113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15113_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 31352003 - 31351722
Alignment:
| Q |
1 |
tttttcaagatttaagttgcagtgatcactgcttctccctataattcacgtggcaacttcttctgctttaacatacttgtttccatgtctagctcacttc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31352003 |
tttttcaagatttaagttgcagtgatcactgcttctccctataattcacgtggcaacttcttctgctttaacatacttgtttccatgtctagctcacttc |
31351904 |
T |
|
| Q |
101 |
tatttctcctctaaacaagaccatgtgttgagcgtgcagtaagtttgatttcacgtattattctcagtcttgcacaatatgcttcaaacttttttgaagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31351903 |
tatttctcctctaaacaagaccatgtgttgagcgtgtagtaagtttgacttcacgtattattctcagtcttgcacaatatgcttcaaacttttttgaagt |
31351804 |
T |
|
| Q |
201 |
gcattaatgaagataataatgaagacctcaccaacactgaagttgtgagtggatagtcaaactcatatgaggatcacgatgt |
282 |
Q |
| |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31351803 |
gcattaatgaagataataatgaagacctcactaacactgaagttgtgagtggatagtcaaactcatatgaggatcacgatgt |
31351722 |
T |
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