View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15114_high_12 (Length: 229)

Name: NF15114_high_12
Description: NF15114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15114_high_12
NF15114_high_12
[»] chr4 (32 HSPs)
chr4 (18-154)||(42274511-42274647)
chr4 (18-151)||(4688269-4688402)
chr4 (18-154)||(530688-530823)
chr4 (18-154)||(20435159-20435294)
chr4 (18-154)||(1298929-1299064)
chr4 (18-154)||(18417674-18417809)
chr4 (31-142)||(35360706-35360816)
chr4 (32-150)||(21048728-21048844)
chr4 (41-154)||(24915813-24915930)
chr4 (18-154)||(32318739-32318874)
chr4 (18-150)||(24969564-24969698)
chr4 (18-154)||(55107541-55107676)
chr4 (32-143)||(13204408-13204518)
chr4 (18-154)||(4552802-4552937)
chr4 (42-154)||(27434651-27434762)
chr4 (32-142)||(24294498-24294607)
chr4 (18-142)||(23928598-23928721)
chr4 (53-145)||(2272418-2272509)
chr4 (29-131)||(4895000-4895101)
chr4 (74-154)||(9355572-9355652)
chr4 (66-154)||(55049419-55049507)
chr4 (18-151)||(28809868-28810001)
chr4 (18-102)||(52824256-52824339)
chr4 (68-154)||(56552127-56552212)
chr4 (18-151)||(3422451-3422583)
chr4 (43-135)||(19600978-19601069)
chr4 (55-102)||(36031001-36031048)
chr4 (32-142)||(16995585-16995694)
chr4 (66-102)||(52587386-52587422)
chr4 (41-132)||(23481962-23482052)
chr4 (107-154)||(43486219-43486266)
chr4 (74-138)||(43484483-43484547)
[»] chr1 (50 HSPs)
chr1 (18-154)||(5189486-5189621)
chr1 (18-144)||(6079401-6079526)
chr1 (18-151)||(47940592-47940725)
chr1 (18-154)||(14387034-14387169)
chr1 (18-154)||(42561314-42561449)
chr1 (18-154)||(9978070-9978206)
chr1 (18-154)||(15324643-15324779)
chr1 (18-151)||(21930397-21930527)
chr1 (23-154)||(26208446-26208577)
chr1 (18-154)||(50627148-50627283)
chr1 (18-151)||(3607751-3607883)
chr1 (18-154)||(2854551-2854686)
chr1 (18-143)||(4299422-4299549)
chr1 (18-154)||(19954930-19955065)
chr1 (18-154)||(23698521-23698656)
chr1 (18-154)||(27240943-27241078)
chr1 (18-154)||(27928317-27928452)
chr1 (18-145)||(2125098-2125224)
chr1 (18-151)||(19797003-19797135)
chr1 (18-154)||(27926270-27926406)
chr1 (18-154)||(40647133-40647270)
chr1 (18-154)||(1387796-1387930)
chr1 (18-154)||(48954233-48954368)
chr1 (32-151)||(957619-957738)
chr1 (43-154)||(27670185-27670295)
chr1 (18-154)||(51789616-51789749)
chr1 (18-135)||(50162576-50162693)
chr1 (32-151)||(48645036-48645153)
chr1 (18-145)||(51276723-51276849)
chr1 (31-129)||(29598353-29598450)
chr1 (61-135)||(49284332-49284406)
chr1 (18-135)||(35547738-35547854)
chr1 (75-154)||(36880584-36880663)
chr1 (32-116)||(9895284-9895367)
chr1 (18-154)||(22339003-22339138)
chr1 (46-150)||(50856344-50856450)
chr1 (41-110)||(28243998-28244066)
chr1 (27-131)||(5059604-5059707)
chr1 (31-132)||(2302433-2302533)
chr1 (52-123)||(48958257-48958327)
chr1 (73-154)||(36007839-36007920)
chr1 (73-141)||(39015225-39015293)
chr1 (67-142)||(28431733-28431808)
chr1 (18-151)||(16518320-16518455)
chr1 (42-102)||(18651321-18651380)
chr1 (42-92)||(16755266-16755315)
chr1 (120-154)||(50627150-50627184)
chr1 (105-150)||(362460-362505)
chr1 (18-59)||(36880624-36880665)
chr1 (18-63)||(49285084-49285129)
[»] chr3 (57 HSPs)
chr3 (18-154)||(21969176-21969311)
chr3 (18-154)||(21991612-21991747)
chr3 (18-151)||(4072295-4072428)
chr3 (18-150)||(8831757-8831889)
chr3 (18-154)||(25446267-25446402)
chr3 (32-154)||(3970510-3970631)
chr3 (32-154)||(13078182-13078303)
chr3 (18-154)||(25488360-25488495)
chr3 (18-154)||(25561028-25561163)
chr3 (18-154)||(43639100-43639236)
chr3 (18-154)||(45487816-45487951)
chr3 (18-154)||(10254585-10254721)
chr3 (18-154)||(12789623-12789758)
chr3 (18-154)||(32237413-32237548)
chr3 (18-154)||(36657452-36657587)
chr3 (18-151)||(13724010-13724142)
chr3 (18-154)||(50099449-50099586)
chr3 (18-142)||(12838094-12838217)
chr3 (32-144)||(22101195-22101307)
chr3 (18-154)||(26906471-26906606)
chr3 (18-154)||(36278775-36278910)
chr3 (18-142)||(55340324-55340448)
chr3 (18-145)||(5529908-5530035)
chr3 (32-154)||(22176139-22176261)
chr3 (32-154)||(36822779-36822900)
chr3 (18-150)||(404061-404193)
chr3 (18-154)||(10441277-10441412)
chr3 (18-154)||(44611400-44611535)
chr3 (20-154)||(10117534-10117663)
chr3 (18-131)||(45712945-45713057)
chr3 (18-154)||(1476570-1476705)
chr3 (18-154)||(43150497-43150631)
chr3 (18-154)||(39850363-39850499)
chr3 (18-154)||(10017131-10017261)
chr3 (29-135)||(42105421-42105526)
chr3 (18-135)||(37506165-37506280)
chr3 (66-142)||(35368797-35368873)
chr3 (18-102)||(36329251-36329334)
chr3 (18-104)||(38125248-38125333)
chr3 (42-154)||(44920666-44920776)
chr3 (42-133)||(157008-157099)
chr3 (69-154)||(46679328-46679413)
chr3 (32-151)||(26977721-26977839)
chr3 (20-154)||(37536889-37537022)
chr3 (18-151)||(26976864-26976996)
chr3 (46-142)||(39677305-39677400)
chr3 (18-102)||(46664193-46664276)
chr3 (72-131)||(49984001-49984060)
chr3 (77-151)||(46222050-46222124)
chr3 (66-154)||(297556-297644)
chr3 (20-59)||(20366705-20366744)
chr3 (18-72)||(32362878-32362932)
chr3 (120-154)||(36657551-36657585)
chr3 (66-135)||(32363118-32363187)
chr3 (79-132)||(37542064-37542117)
chr3 (18-58)||(36657450-36657490)
chr3 (19-59)||(39850362-39850402)
[»] chr8 (25 HSPs)
chr8 (24-154)||(40891036-40891165)
chr8 (18-154)||(29780978-29781113)
chr8 (18-150)||(37114255-37114386)
chr8 (18-154)||(15882217-15882353)
chr8 (18-154)||(38629491-38629626)
chr8 (18-154)||(38520035-38520170)
chr8 (18-145)||(23940832-23940959)
chr8 (41-150)||(4261999-4262107)
chr8 (32-151)||(12234497-12234616)
chr8 (32-150)||(17426651-17426770)
chr8 (18-154)||(8210340-8210475)
chr8 (18-150)||(24211301-24211432)
chr8 (41-154)||(35467211-35467322)
chr8 (32-151)||(33100667-33100785)
chr8 (32-154)||(24741842-24741963)
chr8 (32-135)||(38405169-38405272)
chr8 (71-151)||(11828618-11828698)
chr8 (32-154)||(14834691-14834811)
chr8 (29-143)||(5356153-5356267)
chr8 (29-135)||(40393751-40393855)
chr8 (32-98)||(4035772-4035837)
chr8 (46-135)||(7959858-7959948)
chr8 (32-113)||(10778688-10778768)
chr8 (72-123)||(25264277-25264328)
chr8 (120-154)||(29781077-29781111)
[»] chr2 (27 HSPs)
chr2 (18-151)||(1924002-1924135)
chr2 (18-154)||(24101851-24101986)
chr2 (18-154)||(45408642-45408777)
chr2 (18-143)||(23835893-23836018)
chr2 (18-142)||(2818683-2818806)
chr2 (18-154)||(12850561-12850696)
chr2 (18-154)||(22269739-22269874)
chr2 (18-154)||(34490473-34490608)
chr2 (18-154)||(7737081-7737217)
chr2 (18-154)||(16705750-16705885)
chr2 (18-150)||(27920589-27920720)
chr2 (43-154)||(42713796-42713907)
chr2 (32-154)||(3116907-3117028)
chr2 (29-150)||(9850781-9850900)
chr2 (18-154)||(9281366-9281501)
chr2 (18-142)||(34455902-34456025)
chr2 (18-145)||(9933597-9933723)
chr2 (18-154)||(20892901-20893037)
chr2 (18-154)||(43475961-43476098)
chr2 (43-150)||(6605777-6605882)
chr2 (32-142)||(29229394-29229504)
chr2 (32-142)||(29342694-29342804)
chr2 (18-151)||(7116387-7116519)
chr2 (18-98)||(17434755-17434835)
chr2 (66-142)||(40362547-40362622)
chr2 (18-142)||(39243014-39243137)
chr2 (107-154)||(10552986-10553033)
[»] chr6 (25 HSPs)
chr6 (18-151)||(8091079-8091211)
chr6 (18-154)||(15546649-15546784)
chr6 (18-154)||(21379960-21380095)
chr6 (18-151)||(20501723-20501855)
chr6 (18-154)||(11687162-11687297)
chr6 (18-154)||(14393578-14393716)
chr6 (32-142)||(13439726-13439836)
chr6 (18-132)||(18998157-18998271)
chr6 (32-154)||(29609032-29609153)
chr6 (18-151)||(4890502-4890635)
chr6 (16-149)||(13172598-13172729)
chr6 (18-154)||(885402-885537)
chr6 (18-150)||(3369002-3369133)
chr6 (18-154)||(7808626-7808761)
chr6 (32-145)||(4238883-4238997)
chr6 (18-132)||(17279541-17279657)
chr6 (18-135)||(31764363-31764479)
chr6 (18-93)||(4076649-4076723)
chr6 (96-151)||(6433751-6433806)
chr6 (42-104)||(34522329-34522391)
chr6 (72-131)||(2599098-2599156)
chr6 (120-154)||(11687261-11687295)
chr6 (72-113)||(17367117-17367158)
chr6 (18-102)||(4179098-4179180)
chr6 (18-58)||(11687160-11687200)
[»] chr7 (40 HSPs)
chr7 (18-154)||(20184257-20184393)
chr7 (18-154)||(30594710-30594845)
chr7 (32-154)||(35339297-35339418)
chr7 (18-154)||(24836037-24836172)
chr7 (18-154)||(38883238-38883373)
chr7 (20-154)||(34052298-34052431)
chr7 (18-154)||(31231633-31231770)
chr7 (18-154)||(10936489-10936624)
chr7 (18-154)||(30259085-30259220)
chr7 (18-145)||(45997536-45997662)
chr7 (18-151)||(39617863-39617996)
chr7 (32-143)||(3953072-3953182)
chr7 (18-143)||(37093785-37093909)
chr7 (32-153)||(40358146-40358266)
chr7 (32-145)||(9285742-9285854)
chr7 (32-145)||(9289809-9289921)
chr7 (41-142)||(12142232-12142333)
chr7 (32-135)||(24123793-24123897)
chr7 (155-214)||(30594909-30594968)
chr7 (18-150)||(48103385-48103513)
chr7 (42-151)||(31521547-31521655)
chr7 (32-135)||(25742473-25742571)
chr7 (72-147)||(39143738-39143813)
chr7 (18-135)||(33749660-33749777)
chr7 (18-119)||(38528464-38528566)
chr7 (32-128)||(29277869-29277963)
chr7 (18-98)||(35665691-35665770)
chr7 (73-154)||(10398390-10398471)
chr7 (77-132)||(44148722-44148777)
chr7 (79-135)||(21581184-21581240)
chr7 (18-142)||(22723257-22723383)
chr7 (31-142)||(38989102-38989214)
chr7 (32-101)||(47237497-47237568)
chr7 (73-116)||(21595125-21595168)
chr7 (73-115)||(25572883-25572925)
chr7 (69-142)||(16876487-16876560)
chr7 (41-126)||(1072274-1072358)
chr7 (120-154)||(38883240-38883274)
chr7 (18-70)||(38528407-38528459)
chr7 (18-58)||(38883335-38883375)
[»] scaffold0188 (1 HSPs)
scaffold0188 (18-154)||(7103-7238)
[»] scaffold0086 (1 HSPs)
scaffold0086 (32-154)||(48157-48278)
[»] scaffold0122 (1 HSPs)
scaffold0122 (18-154)||(45851-45986)
[»] chr5 (44 HSPs)
chr5 (18-154)||(4265999-4266134)
chr5 (18-154)||(15855860-15855995)
chr5 (18-154)||(16472972-16473107)
chr5 (18-154)||(35420631-35420766)
chr5 (18-135)||(24397284-24397400)
chr5 (25-154)||(20476455-20476583)
chr5 (18-154)||(33629364-33629501)
chr5 (32-154)||(1138590-1138711)
chr5 (32-154)||(21261974-21262095)
chr5 (18-142)||(12807928-12808051)
chr5 (18-142)||(13754322-13754445)
chr5 (18-154)||(43539124-43539259)
chr5 (18-145)||(21259758-21259884)
chr5 (24-154)||(12744849-12744978)
chr5 (18-123)||(1164845-1164950)
chr5 (66-154)||(32623234-32623322)
chr5 (32-154)||(19976292-19976414)
chr5 (32-133)||(37655192-37655291)
chr5 (18-135)||(8364668-8364784)
chr5 (32-133)||(37552348-37552448)
chr5 (31-135)||(1456060-1456163)
chr5 (72-154)||(780813-780895)
chr5 (32-128)||(5144459-5144553)
chr5 (18-142)||(18236483-18236608)
chr5 (18-151)||(35806952-35807084)
chr5 (87-151)||(2529066-2529130)
chr5 (24-127)||(35276338-35276441)
chr5 (43-111)||(735318-735385)
chr5 (86-154)||(21591232-21591300)
chr5 (86-154)||(21595349-21595417)
chr5 (31-102)||(12191422-12191492)
chr5 (43-115)||(30808032-30808105)
chr5 (24-93)||(42522900-42522968)
chr5 (47-93)||(2268668-2268713)
chr5 (120-154)||(15855862-15855896)
chr5 (120-154)||(16472974-16473008)
chr5 (89-135)||(28056179-28056225)
chr5 (76-114)||(34513477-34513515)
chr5 (120-154)||(35420730-35420764)
chr5 (106-151)||(2268709-2268754)
chr5 (73-113)||(2538467-2538507)
chr5 (18-58)||(15855957-15855997)
chr5 (18-58)||(16473069-16473109)
chr5 (18-58)||(35420629-35420669)
[»] scaffold0107 (1 HSPs)
scaffold0107 (18-154)||(51080-51215)
[»] scaffold0163 (1 HSPs)
scaffold0163 (18-150)||(1962-2094)
[»] scaffold0653 (1 HSPs)
scaffold0653 (32-145)||(3421-3533)
[»] scaffold0137 (1 HSPs)
scaffold0137 (18-145)||(10133-10258)
[»] scaffold0118 (1 HSPs)
scaffold0118 (18-154)||(14459-14594)
[»] scaffold0595 (1 HSPs)
scaffold0595 (18-154)||(5718-5857)
[»] scaffold0013 (1 HSPs)
scaffold0013 (68-135)||(94238-94305)
[»] scaffold0018 (1 HSPs)
scaffold0018 (66-154)||(138296-138384)
[»] scaffold0006 (1 HSPs)
scaffold0006 (18-98)||(72346-72425)


Alignment Details
Target: chr4 (Bit Score: 105; Significance: 1e-52; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 42274647 - 42274511
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  42274647 aattccttaggtgtttttcgtatggttcttaactaaaaatatatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtg 42274548  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||||||||||||    
T  42274547 aatttagttaagaaccatacgaaaagcatctaaggaa 42274511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 4688402 - 4688269
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| | |||||||  |||    
T  4688402 aattccttagatgattttcgtatggttcttaattaaaaatacatatttttttggatataacaaactttgagaaaattgtgaatttgaggaaatcacagtg 4688303  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||||||||||||||| ||||||||| |||||    
T  4688302 aatttagttaagaaccatacgaaaagcacctaag 4688269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 530823 - 530688
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  530823 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatgatggtg 530725  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| | ||||||| ||||||||    
T  530724 aatttagttaagaaccatacaaaaagcacctaaggaa 530688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 20435294 - 20435159
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||| |||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| | ||||||||| ||    
T  20435294 aattctttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaacttcgagaaaattatggatttgaggaaatcatgatg 20435196  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||||||||||||    
T  20435195 aatttagttaagaaccatacgaaaagcatctaaggaa 20435159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 1298929 - 1299064
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  1298929 aattccttaggtgctttttgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtg 1299027  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||||||  |||||||| ||||||||    
T  1299028 aatttagttaagaaccataagaaaagcacctaaggaa 1299064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 18417674 - 18417809
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  18417674 aattccttaggtgcttttcgtatggttcttaactaaaaatatatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtg 18417772  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||| ||||||||||| | ||||||| ||||||||    
T  18417773 aatttaattaagaaccatacaaaaagcacctaaggaa 18417809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 35360706 - 35360816
Alignment:
Q  31 tttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaaga 130  Q
    ||||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35360706 tttttcgtatggttcttaactaaaaatacatatt-ttttagatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaaga 35360804  T
Q  131 accatgcgaaaa 142  Q
    ||||| ||||||    
T  35360805 accatacgaaaa 35360816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 150
Target Start/End: Complemental strand, 21048844 - 21048728
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| |||||||||||||| |||  |||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  21048844 ttttcgtatggttcttaactaaaaatacatatttttt--gatataacaaacttcgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 21048747  T
Q  132 ccatgcgaaaagcatctaa 150  Q
    |||| ||||||||||||||    
T  21048746 ccatacgaaaagcatctaa 21048728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 24915930 - 24915813
Alignment:
Q  41 ggttcttaattaaaaatacatattatttt----ggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatg 136  Q
    ||||||||| |||||||||||||||||||    ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||     
T  24915930 ggttcttaactaaaaatacatattattttttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccata 24915831  T
Q  137 cgaaaagcatctaaggaa 154  Q
    ||||||||| ||||||||    
T  24915830 cgaaaagcacctaaggaa 24915813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 32318874 - 32318739
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||| |||| || ||||| || | |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||    
T  32318874 aattctttaggtgcttttcatatgattcttaattaaaaatatatatt-ttttggatataacaaactttgagaaaattatggatctgaggaaatcatggtg 32318776  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| |||||||||  |||||||    
T  32318775 aatttagttaagaaccatacgaaaagcacataaggaa 32318739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 24969698 - 24969564
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattatttt--ggatataacaaactttgagaaaattatggatttaaagaaatcatgg 115  Q
    |||||||||| || ||||||||  |||||||| ||||||||||| || ||||  |||||||||||||||||||||||||||| |||| | ||||||||||    
T  24969698 aattccttaggtgcttttcgtatagttcttaactaaaaatacatttttttttttggatataacaaactttgagaaaattatgaatttgaggaaatcatgg 24969599  T
Q  116 tgaatttagttaagaaccatgcgaaaagcatctaa 150  Q
    |||||||||||||||||||| ||||||||| ||||    
T  24969598 tgaatttagttaagaaccatacgaaaagcacctaa 24969564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 55107541 - 55107676
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||  || ||||| || ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||| | |||||||||||     
T  55107541 aattccttatgtgcttttcatatggttcttaactaaaaatacatattattt-ggatataacaaactttgagaaaattatgcatttgaggaaatcatggta 55107639  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||| ||||||||| | ||||||| ||||||||    
T  55107640 aatttagtaaagaaccatacaaaaagcacctaaggaa 55107676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 13204408 - 13204518
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||    
T  13204408 tttttgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaaaaa 13204506  T
Q  132 ccatgcgaaaag 143  Q
    |||| |||||||    
T  13204507 ccatacgaaaag 13204518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 4552802 - 4552937
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||  || ||||| || |||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  4552802 aattccttaagtgcttttcatatggtttttaactaaaaataaatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatg 4552900  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| |  ||||||| |||||||    
T  4552901 aatttagttaagaaccatacagaaagcatataaggaa 4552937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 27434651 - 27434762
Alignment:
Q  42 gttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaa 141  Q
    |||||||| ||||||||||| || |||||||||||||||||||||||||||||||| |||| | ||||| ||||| |||||||||||||||||| |||||    
T  27434651 gttcttaactaaaaatacatttt-ttttggatataacaaactttgagaaaattatgaatttgaggaaattatggtaaatttagttaagaaccatacgaaa 27434749  T
Q  142 agcatctaaggaa 154  Q
    |||| ||||||||    
T  27434750 agcacctaaggaa 27434762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 32 - 142
Target Start/End: Original strand, 24294498 - 24294607
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||||| | |||| | ||||| ||||||||||||||||||||    
T  24294498 ttttcgtatgattcttaattaaaaatacatatttttttg-atataacaaactttgagaaaattacgaatttgaggaaattatggtgaatttagttaagaa 24294596  T
Q  132 ccatgcgaaaa 142  Q
    |||| ||||||    
T  24294597 ccatacgaaaa 24294607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 23928721 - 23928598
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || ||| |||| | ||||||| |||||||| || || |||||||||||||||| |||||||||||||||||||| | ||||||||||||    
T  23928721 aattccttaggtgctttgcgtatgattcttaactaaaaatatatttt-ttttggatataacaaattttgagaaaattatggatttgaggaaatcatggtg 23928623  T
Q  118 aatttagttaagaaccatgcgaaaa 142  Q
    |||||||||||||| ||| ||||||    
T  23928622 aatttagttaagaatcatacgaaaa 23928598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 53 - 145
Target Start/End: Original strand, 2272418 - 2272509
Alignment:
Q  53 aaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagca 145  Q
    |||||||| ||| ||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  2272418 aaaataca-atttttttggatagaacaaactttgataaaattatggatttaaggaaatcatggtgaatttagctaagaaccatacgaaaagca 2272509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 4895000 - 4895101
Alignment:
Q  29 tgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaa 128  Q
    ||||||| |||  |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| |||| | ||||||||||| |||||||||||    
T  4895000 tgttttttgtatagttcttaactaaaaatacatatt-ttttgaatataacaaactttgagaaaattatgaatttgaggaaatcatggtaaatttagttaa 4895098  T
Q  129 gaa 131  Q
    |||    
T  4895099 gaa 4895101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 9355652 - 9355572
Alignment:
Q  74 ataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  9355652 ataacaaattctgagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatatgaaaagcacctaaggaa 9355572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 154
Target Start/End: Complemental strand, 55049507 - 55049419
Alignment:
Q  66 ttttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||||||| |||||||||| ||| | |||||||| |||||||||||||||||| || ||||||||| ||||||||    
T  55049507 ttttggatataacaaactttgaaaaaattatgggtttgaggaaatcatagtgaatttagttaagaactatacgaaaagcacctaaggaa 55049419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 28810001 - 28809868
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| || |||| ||| ||||||||| || ||||||||||| |||||||||||||||| |||||||||||||||||||| |  |||||||||||    
T  28810001 aatttcttagctgcttttggtatggttcttaactagaaatacatatt-ttttggatataacaaattttgagaaaattatggatttgagaaaatcatggtg 28809903  T
Q  118 -aatttagttaagaaccatgcgaaaagcatctaag 151  Q
     ||||||||||| ||| || | ||||||| |||||    
T  28809902 aaatttagttaaaaacaataccaaaagcacctaag 28809868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 52824256 - 52824339
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggattt 102  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  52824256 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttagatataataaactttgagaaaattatggattt 52824339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 56552127 - 56552212
Alignment:
Q  68 ttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||||| |||||| ||||||||||| ||| ||||| ||||||||    
T  56552127 ttggttataacaaactttgagaaaattatggatttgaggaaatcatggttaatttatttaagaaccatacgataagca-ctaaggaa 56552212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 3422583 - 3422451
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||| |||| ||||||||||| |||| |||| |||||||| || || |||  |||| || |||||||||||||||||||||||| |  |||||||  |     
T  3422583 aattctttaggtgtttttcgtatggtttttaactaaaaatatatctt-tttacgatacaataaactttgagaaaattatggatttgagaaaatcatacta 3422485  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||| |||||||| || ||||||||| |||||    
T  3422484 aatttaattaagaactatacgaaaagcacctaag 3422451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 135
Target Start/End: Complemental strand, 19601069 - 19600978
Alignment:
Q  43 ttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccat 135  Q
    |||||||||||||||||| ||| ||||  | |||||||||||||| || |||||||||||||  ||||||||| ||||||| |||| ||||||    
T  19601069 ttcttaattaaaaatacacattttttttaa-ataacaaactttgaaaatattatggatttaacaaaatcatggcgaatttaattaaaaaccat 19600978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 36031048 - 36031001
Alignment:
Q  55 aatacatattattttggatataacaaactttgagaaaattatggattt 102  Q
    |||||||||| ||||  |||||||||||||||||||||||||||||||    
T  36031048 aatacatatttttttttatataacaaactttgagaaaattatggattt 36031001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 16995694 - 16995585
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| |||| |||| ||| ||||||| || |||| ||||||||||||| ||| ||||| |||| ||| |  |||||||| |||||||| |||| ||    
T  16995694 ttttcgtatggtttttaactaacaatacatctt-ttttagatataacaaactctgaaaaaatgatgggtttgagaaaatcatgttgaatttaattaaaaa 16995596  T
Q  132 ccatgcgaaaa 142  Q
    |||| ||||||    
T  16995595 ccatacgaaaa 16995585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 52587422 - 52587386
Alignment:
Q  66 ttttggatataacaaactttgagaaaattatggattt 102  Q
    |||| ||||||||||||||||||||||||||||||||    
T  52587422 tttttgatataacaaactttgagaaaattatggattt 52587386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 23482052 - 23481962
Alignment:
Q  41 ggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaac 132  Q
    ||||||||| |||| |||||| || ||||  |||||||||| |||||||||||||| |||||||| | |||||  | |||||| ||||||||    
T  23482052 ggttcttaactaaatatacatctt-ttttatatataacaaattttgagaaaattatagatttaaaaacatcataataaatttaattaagaac 23481962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 43486266 - 43486219
Alignment:
Q  107 aaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||||||||||||||  |||||| | ||||||||    
T  43486266 aaatcatggtgaatttagttaagaaccataggaaaagtacctaaggaa 43486219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 43484547 - 43484483
Alignment:
Q  74 ataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcg 138  Q
    |||| ||||| ||| |||||||||||| || ||||||||||   |||||||||| ||||||||||    
T  43484547 ataataaactatgaaaaaattatggatctacagaaatcatgaataatttagttatgaaccatgcg 43484483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 1e-52; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 5189486 - 5189621
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5189486 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtg 5189584  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||||||||||||    
T  5189585 aatttagttaagaaccatacgaaaagcatctaaggaa 5189621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 6079401 - 6079526
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  6079401 aattccttagatgtttttcgtacggttcttcactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtg 6079499  T
Q  118 aatttagttaagaaccatgcgaaaagc 144  Q
    |||||||||||||||||| ||||||||    
T  6079500 aatttagttaagaaccatacgaaaagc 6079526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 47940725 - 47940592
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  47940725 aattccttaggtgtttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtg 47940626  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||||||||||||||| ||||||||| |||||    
T  47940625 aatttagttaagaaccatacgaaaagcacctaag 47940592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 14387169 - 14387034
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  14387169 aattccttaggtgtttttcgtatggttcttaactaaaaatacatatt-ttttggatataataaactttgagaaaattatggatttgaggaaatcatggtg 14387071  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  14387070 aatttagttaagaaccatacgaaatgcatctaaggaa 14387034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 42561449 - 42561314
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  42561449 aattccttaggtgctttttgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatatgaagaaatcatggtg 42561351  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  42561350 aatttagttaagaaccatacgaaaagcacctaaggaa 42561314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 9978206 - 9978070
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| |||    
T  9978206 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatagtg 9978107  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||| ||| |||||||||  |||||||    
T  9978106 aatttagttaagaatcatacgaaaagcacataaggaa 9978070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 15324643 - 15324779
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| |||    
T  15324643 aatttcttaggtgcttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatagtg 15324742  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| |||||||||  |||||||    
T  15324743 aatttagttaagaaccatacgaaaagcacataaggaa 15324779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 21930397 - 21930527
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||   ||||||    
T  21930397 aattccttagttgtttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttaagaaaattatggatttaaagaa---atggtg 21930493  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||||||||||||||| |||||| || |||||    
T  21930494 aatttagttaagaaccatacgaaaaacacctaag 21930527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 26208446 - 26208577
Alignment:
Q  23 cttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaattt 122  Q
    ||||| || |||||||| |||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  26208446 cttaggtgcttttcgtatggttctcaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaagaaattatggtgaattt 26208545  T
Q  123 agttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||| |||||||| ||||||||| ||||||||    
T  26208546 agttcagaaccatacgaaaagcacctaaggaa 26208577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 50627148 - 50627283
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| |     
T  50627148 aattccttagatgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatgata 50627246  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
      |||||||||||||||| |||||||||| |||||||    
T  50627247 tttttagttaagaaccatacgaaaagcatataaggaa 50627283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 3607883 - 3607751
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  3607883 aatttcttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatg 3607785  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||||||||||||||| | ||||||| |||||    
T  3607784 aatttagttaagaaccatacaaaaagcacctaag 3607751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 2854686 - 2854551
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| |  |||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| |||| | |||||||| |||    
T  2854686 aattccttaggtccttttcgtatggttcttaactaaaaatatatatt-ttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtg 2854588  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  2854587 aatttagttaagaaccatacgaaaagtatctaaggaa 2854551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 4299549 - 4299422
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattatttt--ggatataacaaactttgagaaaattatggatttaaagaaatcatgg 115  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||| ||||  ||||||||||||||||||||||||||||||||| | ||||| ||||    
T  4299549 aattccttaggtgtttttcgtatggttcttaactaaaaatacatatttttttttggatataacaaactttgagaaaattatggatttgaggaaataatgg 4299450  T
Q  116 tgaatttagttaagaaccatgcgaaaag 143  Q
    ||||||||||||||| |||| |||||||    
T  4299449 tgaatttagttaagagccatacgaaaag 4299422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 19955065 - 19954930
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| |  |||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  19955065 aattccttaggtactttttgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtg 19954967  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||| || |||||||||  |||||||    
T  19954966 aatttagttaagaactatacgaaaagcacataaggaa 19954930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 23698656 - 23698521
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| |  |||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| |||| | |||||||| |||    
T  23698656 aattccttaggtccttttcgtatggttcttaactaaaaatatatatt-ttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtg 23698558  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  23698557 aatttagttaagaaccatacgaaaagtatctaaggaa 23698521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 27241078 - 27240943
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||| |||| || ||| |||| ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  27241078 aattcgttaggtgctttgcgtatggttcttaactaaaaatatatatt-ttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtg 27240980  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  27240979 aatttagttaagaaccatacgaaaagcacctaaggaa 27240943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 27928452 - 27928317
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || | |||||||  |||    
T  27928452 aattccttaggtgtttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatgga-ttgaggaaatcacagtg 27928354  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| | |||||||  |||||||    
T  27928353 aatttagttaagaaccatacaaaaagcacataaggaa 27928317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 2125224 - 2125098
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| || ||||||||  |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||  ||||||| |||||||||||    
T  2125224 aatttcttaggtgcttttcgtatagttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattataaatttaaaaaaatcatggtg 2125126  T
Q  118 aatttagttaagaaccatgcgaaaagca 145  Q
    |||||||||||||||||| |||||||||    
T  2125125 aatttagttaagaaccatacgaaaagca 2125098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 19797135 - 19797003
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||| | |||||||||||     
T  19797135 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgaaaaaattatggatttgaggaaatcatggta 19797037  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
      ||||||||| |||||| ||||||||| |||||    
T  19797036 tttttagttaaaaaccatacgaaaagcacctaag 19797003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 27926406 - 27926270
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattatttt-ggatataacaaactttgagaaaattatggatttaaagaaatcatggt 116  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||| || | |||||||  ||    
T  27926406 aattccttaggtgcttttcgtatggttcttaactaaaaatacatattttttttggatataacaaactttgagaaaattatgga-ttgaggaaatcacagt 27926308  T
Q  117 gaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||||||| |||||||||  |||||||    
T  27926307 gaatttagttaagaaccatacgaaaagcacataaggaa 27926270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 40647133 - 40647270
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttgg-atataacaaactttgagaaaattatggatttaaagaaatcatggt 116  Q
    |||||||||| || |||||||  ||||||||| |||||||||||||| ||||   ||||||||||||||||||||||||||||||| | |||||||||||    
T  40647133 aattccttagctgcttttcgtgtggttcttaactaaaaatacatattttttttttatataacaaactttgagaaaattatggatttgaggaaatcatggt 40647232  T
Q  117 gaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||| || ||| ||||||||| ||||||||    
T  40647233 gaatttagttaaaaatcatacgaaaagcacctaaggaa 40647270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 1387796 - 1387930
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||| |||| | |||||||||||     
T  1387796 aattccttag-tgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataataaactttgagaaaattatgaatttgaggaaatcatggta 1387893  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
      |||||||||||||||| ||||||||| ||||||||    
T  1387894 tctttagttaagaaccatacgaaaagcacctaaggaa 1387930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 48954368 - 48954233
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| |  |||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| |||| | |||||||| |||    
T  48954368 aattccttaggtccttttcgtatggttcttaactaaaaatatatatt-ttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtg 48954270  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||||||  |||||| | ||||||||    
T  48954269 aatttagttaagaaccatatgaaaagtacctaaggaa 48954233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 151
Target Start/End: Original strand, 957619 - 957738
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| | ||||||| ||||| |||||||| |||| |||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  957619 ttttcgtatgattcttaactaaaattacatattttttttgatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaa 957718  T
Q  132 ccatgcgaaaagcatctaag 151  Q
     ||| |||||| || |||||    
T  957719 tcatacgaaaaacacctaag 957738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 27670185 - 27670295
Alignment:
Q  43 ttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaa 142  Q
    ||||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||| ||||||    
T  27670185 ttcttaactaaaaatacatatt-ttttgaatataaaaaactttgagaaaattatggatttaaggaaatcatgatgaatttagttaaaaaccatacgaaaa 27670283  T
Q  143 gcatctaaggaa 154  Q
    |||  |||||||    
T  27670284 gcacataaggaa 27670295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 51789749 - 51789616
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||||||| ||| |||||||| ||||||||| |||||| |||| ||   || ||||||||| ||||||||||||||||||| || | ||||||||||||    
T  51789749 aattccttaaatgcttttcgtatggttcttaactaaaaacacatttt---ttagatataacatactttgagaaaattatggaattgaggaaatcatggtg 51789653  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||| |||||| |||||| || ||||||||    
T  51789652 aatttagttaaaaaccatacgaaaatcacctaaggaa 51789616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 50162693 - 50162576
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||| ||| ||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||| ||||| |  |||||| ||||    
T  50162693 aattccttaggtgctttttgtatggttcttaactaaaattacatatttttttggatataacaaactttgagaaaattatagatttgagaaaatcacggtg 50162594  T
Q  118 aatttagttaagaaccat 135  Q
    |||||| |||| ||||||    
T  50162593 aatttaattaaaaaccat 50162576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 151
Target Start/End: Complemental strand, 48645153 - 48645036
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||| | ||||||||| |   ||||||||||||    
T  48645153 ttttcgta-ggttcttaactaaaaatacatatt-ttttagatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaa 48645056  T
Q  132 ccatgcgaaaagcatctaag 151  Q
     ||| ||||||||| |||||    
T  48645055 gcatacgaaaagcacctaag 48645036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 51276849 - 51276723
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| || |||||||| ||||||||  ||||||||||| || ||||  |||||| |||||||||||||||||||||||| | ||||||||  ||    
T  51276849 aatttcttaggtgcttttcgtatggttcttagctaaaaatacatttttttttt-atataataaactttgagaaaattatggatttgaggaaatcataatg 51276751  T
Q  118 aatttagttaagaaccatgcgaaaagca 145  Q
    |||||||||||||||||| |||||||||    
T  51276750 aatttagttaagaaccatacgaaaagca 51276723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 29598353 - 29598450
Alignment:
Q  31 tttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaag 129  Q
    ||||||||| |||| | || |||||||||||||| ||||  ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  29598353 tttttcgtatggttatcaactaaaaatacatattttttta-atataacaaactttgagaaaattatggatttaaggaaatcatagtgaatttagttaag 29598450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 49284406 - 49284332
Alignment:
Q  61 tattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccat 135  Q
    |||| |||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||    
T  49284406 tatttttttggatataacaaactttgaaaaaattatggatttaagaaaatcatggtgaatttagttaagaaccat 49284332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 35547854 - 35547738
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||| ||| ||| ||||||||   |||| |||||||||||||| || ||||||||||| |||||||  |||||||||||||||||||||||| ||||||    
T  35547854 aattctttaaatgcttttcgtatcattctaaattaaaaatacatttt-ttttggatatatcaaacttatagaaaattatggatttaaagaaattatggtg 35547756  T
Q  118 aatttagttaagaaccat 135  Q
    | ||||||||||||||||    
T  35547755 attttagttaagaaccat 35547738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 154
Target Start/End: Original strand, 36880584 - 36880663
Alignment:
Q  75 taacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||||||||||||| | |||||||||||   |||||||||||||||| ||||||||||||||||||    
T  36880584 taacaaactttgagaaaattatggatttgaggaaatcatggtatttttagttaagaaccatacgaaaagcatctaaggaa 36880663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 9895284 - 9895367
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggt 116  Q
    |||||||| ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| |||| | |||||||||||    
T  9895284 ttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatgtatttgaggaaatcatggt 9895367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 22339138 - 22339003
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||| |||| || ||||| || ||||||||| ||||||||||  || | ||||||| |||| ||||||||||||| |||||||| | ||||||||||||    
T  22339138 aattctttaggtgcttttcatatggttcttaactaaaaatacacctt-tgttggatagaacagactttgagaaaatgatggatttgatgaaatcatggtg 22339040  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    | |||||||||||||||  ||||||||| || |||||    
T  22339039 agtttagttaagaaccaatcgaaaagcaacttaggaa 22339003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 50856450 - 50856344
Alignment:
Q  46 ttaattaaaaatacatat--tattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaag 143  Q
    |||| |||||||||||||  | |||||||||||||||| ||||||||||||||||| || | ||||| ||||||||||||| |||||| ||| |||||||    
T  50856450 ttaagtaaaaatacatatatttttttggatataacaaattttgagaaaattatggacttgaggaaataatggtgaatttagctaagaatcatacgaaaag 50856351  T
Q  144 catctaa 150  Q
    || ||||    
T  50856350 cacctaa 50856344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 28243998 - 28244066
Alignment:
Q  41 ggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaat 110  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||    
T  28243998 ggttcttaactaaaaatacatctt-ttttggatataacaaactttgagaaaattatggatttaaggaaat 28244066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 5059707 - 5059604
Alignment:
Q  27 gatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagtt 126  Q
    ||||| ||||||| |||| |||  ||||||||||| || || || |||||||||||||||| ||||||||||||||||| |||| ||||| |||||| ||    
T  5059707 gatgtgtttcgtatggttattaggtaaaaatacatttttttatg-atataacaaactttgataaaattatggatttaaaaaaattatggtaaatttaatt 5059609  T
Q  127 aagaa 131  Q
    |||||    
T  5059608 aagaa 5059604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 2302433 - 2302533
Alignment:
Q  31 tttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaaga 130  Q
    |||| |||| ||||||||| ||||| ||||| || | |||||| || | |||||||||||||||||| |||| | ||||||||||||||||| |||||||    
T  2302433 ttttccgtatggttcttaactaaaattacatctt-tcttggatgtagcgaactttgagaaaattatgaatttgaggaaatcatggtgaattttgttaaga 2302531  T
Q  131 ac 132  Q
    ||    
T  2302532 ac 2302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 48958327 - 48958257
Alignment:
Q  52 aaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaattta 123  Q
    ||||||| || || ||||||||||||||||||| |||||||||||| |||||||||||| ||| ||||||||    
T  48958327 aaaaatatatttttttttggatataacaaactt-gagaaaattatgtatttaaagaaattatgatgaattta 48958257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 36007920 - 36007839
Alignment:
Q  73 tataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||||||||||||| |||| | ||||||||||  | |||||||||||||| | | |||| || ||||||||    
T  36007920 tataacaaactttgagaaaattatgtatttgaggaaatcatggatagtttagttaagaaccgtaccaaaaacacctaaggaa 36007839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 39015293 - 39015225
Alignment:
Q  73 tataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaa 141  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| | || | | ||||||||| |||||    
T  39015293 tataacgaactttgagaaaattatggatttgaagaaatcatggttagttaattaaagaaccatacgaaa 39015225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 28431808 - 28431733
Alignment:
Q  67 tttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaa 142  Q
    ||||||||||| ||| ||| | |||||||| ||||| ||||||||||| ||||||||||||| || ||| ||||||    
T  28431808 tttggatataataaattttaaaaaaattatagatttgaagaaatcatgatgaatttagttaaaaatcatacgaaaa 28431733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 16518455 - 16518320
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaa-tacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggt 116  Q
    ||||| ||||||  |||||||| |||||||||| ||||| || || || ||||||||| |||||||| ||||||||||||| | || |  |||| |||||    
T  16518455 aattctttagatacttttcgtatggttcttaataaaaaaatagatctt-ttttggatacaacaaactatgagaaaattatgtaattgagaaaattatggt 16518357  T
Q  117 ga--atttagttaagaaccatgcgaaaagcatctaag 151  Q
    ||  |||||||||| |||||| | ||||||| |||||    
T  16518356 gaatatttagttaaaaaccataccaaaagcacctaag 16518320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 18651380 - 18651321
Alignment:
Q  42 gttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggattt 102  Q
    |||||||| ||||||||||| || |||| | ||||||||| ||||||||||||||||||||    
T  18651380 gttcttaaataaaaatacatttt-ttttagttataacaaattttgagaaaattatggattt 18651321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 16755266 - 16755315
Alignment:
Q  42 gttcttaattaaaaatacatattattttggatataacaaactttgagaaaa 92  Q
    |||||||| |||||||||||||  |||||||||||||||||||||| ||||    
T  16755266 gttcttaactaaaaatacatatg-ttttggatataacaaactttgaaaaaa 16755315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 50627184 - 50627150
Alignment:
Q  120 tttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||| ||||||||||||||||||    
T  50627184 tttagttaagaaccatacgaaaagcatctaaggaa 50627150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 362460 - 362505
Alignment:
Q  105 agaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaa 150  Q
    |||||||||||| |||||||||||||| ||| ||||||||| ||||    
T  362460 agaaatcatggtaaatttagttaagaatcatacgaaaagcacctaa 362505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 36880665 - 36880624
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatac 59  Q
    ||||||||||||| |||||||| ||||||||| |||||||||    
T  36880665 aattccttagatgcttttcgtatggttcttaactaaaaatac 36880624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 49285129 - 49285084
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatat 63  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||    
T  49285129 aattccttaggtgcttttcgtatggttcttaactaaaaatacatat 49285084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 3e-50; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 21969311 - 21969176
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21969311 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtg 21969213  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  21969212 aatttagttaagaaccatacgaaaagcacctaaggaa 21969176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 21991747 - 21991612
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21991747 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtg 21991649  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  21991648 aatttagttaagaaccatacgaaaagcacctaaggaa 21991612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 4072428 - 4072295
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  4072428 aattccttaggtgtttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtg 4072329  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||||||||||||||| ||||||||| |||||    
T  4072328 aatttagttaagaaccatacgaaaagcacctaag 4072295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 8831757 - 8831889
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| |||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8831757 aattccttaggtgcttttcgtatggttctaaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaagaaatcatggtg 8831856  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaa 150  Q
    |||||||||||||||||| ||||||||| ||||    
T  8831857 aatttagttaagaaccatacgaaaagcacctaa 8831889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 25446267 - 25446402
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  25446267 aattccttag-tgcttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtg 25446365  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  25446366 aatttagttaagaaccatacgaaaagcacctaaggaa 25446402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 3970631 - 3970510
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3970631 ttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaa 3970533  T
Q  132 ccatgcgaaaagcatctaaggaa 154  Q
    |||| ||||||||| ||||||||    
T  3970532 ccatacgaaaagcacctaaggaa 3970510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 13078303 - 13078182
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13078303 ttttcgtatgattcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaa 13078205  T
Q  132 ccatgcgaaaagcatctaaggaa 154  Q
    |||| ||||||||| ||||||||    
T  13078204 ccatacgaaaagcacctaaggaa 13078182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 25488495 - 25488360
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  25488495 aattccttaggtgctttttgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatatgaagaaatcatggtg 25488397  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||| || ||||||||| ||||||||    
T  25488396 aatttagttaagaactatacgaaaagcacctaaggaa 25488360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 25561028 - 25561163
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  25561028 aattccttaggtgctttttgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatatgaagaaatcatggtg 25561126  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||| || ||||||||| ||||||||    
T  25561127 aatttagttaagaactatacgaaaagcacctaaggaa 25561163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 43639236 - 43639100
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| | ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43639236 aattccttaggtgcttttcgtatgattcttaactaaaaatatatatttttttggatataacaaactttgagaaaattatggatttgaagaaatcatggtg 43639137  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||| |||||||| ||| ||||||||| ||||||||    
T  43639136 aatttggttaagaatcatacgaaaagcacctaaggaa 43639100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 45487816 - 45487951
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| |||| | ||||||||||||    
T  45487816 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaacattgagaaaattatgaatttgaggaaatcatggtg 45487914  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  45487915 aatttagttaagaaccatacgaaaagcacctaaggaa 45487951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 10254585 - 10254721
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || ||||| || ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||| |  |||||||| ||    
T  10254585 aattccttaggtgcttttcatatggttcttaactaaaaatacatatttttttggatataacaaactttgaaaaaattatggatttgagaaaatcatgatg 10254684  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  10254685 aatttagttaagaaccatacgaaaagcacctaaggaa 10254721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 12789623 - 12789758
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||| |||| | ||||||||||||    
T  12789623 aattccttaggtgtttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgaaaaaattatgaatttgaggaaatcatggtg 12789721  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||| ||||||||||| | ||||||| ||||||||    
T  12789722 aatttaattaagaaccatacaaaaagcacctaaggaa 12789758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 32237548 - 32237413
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |  ||||||||||     
T  32237548 aattccttaggtgcttttcgtatggttcttaattaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatctgagaaaatcatggta 32237450  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| |||||| || ||||||||    
T  32237449 aatttagttaagaaccatacgaaaaacacctaaggaa 32237413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 36657587 - 36657452
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||||||| |     
T  36657587 aattccttagatgcttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgata 36657489  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
      |||||||||||||||| ||||||||||||||||||    
T  36657488 tttttagttaagaaccatacgaaaagcatctaaggaa 36657452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 13724142 - 13724010
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||||||||||||||||||||   || |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  13724142 aattccttagatgtttttcgtataatttttaactaaaaatacatatttttttggatataacaaactttgagaaaattatgaatttgaagaaatcatggtg 13724043  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
    ||||||| |||||||||| | ||||||| |||||    
T  13724042 aatttag-taagaaccatacaaaaagcacctaag 13724010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 50099449 - 50099586
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattatttt-ggatataacaaactttgagaaaattatggatttaaagaaatcatggt 116  Q
    ||||| |||| || |||||||| |||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| | ||||| |||||    
T  50099449 aattcgttaggtgcttttcgtatggtttttaattaaaaatacatattttttttggatataacaaactttgagaaaattatgaatttgaggaaattatggt 50099548  T
Q  117 gaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  50099549 gaatttagttaagaaccatacgaaaagcacctaaggaa 50099586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 12838094 - 12838217
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  12838094 aattccttaggtgctttttgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtg 12838192  T
Q  118 aatttagttaagaaccatgcgaaaa 142  Q
    ||||||||||| |||||| ||||||    
T  12838193 aatttagttaaaaaccatacgaaaa 12838217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 22101195 - 22101307
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  22101195 ttttcgtatggttcttaactaaaaatacatattttgttggatataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaagaa 22101294  T
Q  132 ccatgcgaaaagc 144  Q
    |||| ||||||||    
T  22101295 ccatacgaaaagc 22101307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 26906471 - 26906606
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| |  |||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| |||| | |||||||| |||    
T  26906471 aattccttaggtccttttcgtatggttcttaactaaaaatatatatt-ttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtg 26906569  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  26906570 aatttagttaagaaccatacgaaaagtatctaaggaa 26906606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 36278910 - 36278775
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| |  |||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| |||| | |||||||| |||    
T  36278910 aattccttaggtccttttcgtatggttcttaactaaaaatatatatt-ttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtg 36278812  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  36278811 aatttagttaagaaccatacgaaaagtatctaaggaa 36278775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 55340448 - 55340324
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| | |||||| || ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  55340448 aattccttaggtatttttcatatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtg 55340349  T
Q  118 aatttagttaagaaccatgcgaaaa 142  Q
    ||| |||||||||| ||| ||||||    
T  55340348 aatatagttaagaatcatacgaaaa 55340324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 5529908 - 5530035
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| || |||||||| ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||     
T  5529908 aatttcttaggtgcttttcgtatggttcttaactaaaaatacatatttttttggatatatcaaactttgagaaaattatagatttaaagaaatcatggta 5530007  T
Q  118 aatttagttaagaaccatgcgaaaagca 145  Q
      ||||||||| |||||| |||||||||    
T  5530008 tttttagttaataaccatacgaaaagca 5530035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 22176139 - 22176261
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| |||||||||||||| | |||||||| |||||||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  22176139 ttttcgtatggttcttaactaaaaatacatattttgttggatattacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaagaa 22176238  T
Q  132 ccatgcgaaaagcatctaaggaa 154  Q
    |||| | |||||||  |||||||    
T  22176239 ccatacaaaaagcacataaggaa 22176261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 36822900 - 36822779
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | | |||||||||||   ||||||||||||    
T  36822900 ttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatctgaggaaatcatggtatttttagttaagaa 36822802  T
Q  132 ccatgcgaaaagcatctaaggaa 154  Q
    |||| ||||||||| ||||||||    
T  36822801 ccatacgaaaagcagctaaggaa 36822779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 404061 - 404193
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| || |||||||| | || |||| |||||||| ||||| ||||||||||||||||||||||||||||||| || || | ||||||||||||    
T  404061 aatttcttaggtgcttttcgtatgatttttaactaaaaataaatatttttttggatataacaaactttgagaaaattatagacttgaggaaatcatggtg 404160  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaa 150  Q
    |||||||||||||||||| || |||||||||||    
T  404161 aatttagttaagaaccatacggaaagcatctaa 404193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 10441412 - 10441277
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| |     
T  10441412 aattccttaggtgcttttggtacggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatgata 10441314  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
      |||||||||||| ||| | ||||||| ||||||||    
T  10441313 tttttagttaagaatcataccaaaagcacctaaggaa 10441277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 44611535 - 44611400
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||| ||| |||| |||| |||||||| ||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||||||    
T  44611535 aattccttaggtgttttttgtatggtttttaactaaaaatatatatttttttg-atataacaaactttgagaaaattatgaatttgaagaaatcatggtg 44611437  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||| || | ||||| | ||||||||    
T  44611436 aatttagttaagaactatacaaaaagtacctaaggaa 44611400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 10117534 - 10117663
Alignment:
Q  20 ttccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaa 119  Q
    |||||||| || ||||| || ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |  ||||     ||||    
T  10117534 ttccttaggtgcttttcatatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgagaaaat-----tgaa 10117628  T
Q  120 tttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||| ||||||||| ||||||||    
T  10117629 tttagttaagaaccatacgaaaagcacctaaggaa 10117663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 45713057 - 45712945
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| |||||| || |||||||||||||| |||||||||||||||||||||| |||||||||| ||| | ||||||||||||    
T  45713057 aattccttaggtgcttttcgtatggttctaaactaaaaatacatatt-ttttggatataacaaactttgataaaattatggctttgaggaaatcatggtg 45712959  T
Q  118 aatttagttaagaa 131  Q
    ||||||||||||||    
T  45712958 aatttagttaagaa 45712945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 1476705 - 1476570
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || ||||| || ||||||||| |||||||||| ||| |||| || |||||||||||||||| |||||||||||||| ||||||||||||    
T  1476705 aattccttaggtgcttttcatatggttcttaactaaaaataca-atttttttagagataacaaactttgagagaattatggatttaaggaaatcatggtg 1476607  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||| | |||||||| | ||||||| ||||||||    
T  1476606 aatttaggttagaaccataccaaaagcacctaaggaa 1476570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 43150497 - 43150631
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||||| || || |||||||| |||| |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| | |||||||| |||    
T  43150497 aattcctcaggtgcttttcgtatggtttttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtg 43150595  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||| ||| || |||||||||| ||||    
T  43150596 aatttagttaagaatcatacg-aaagcatctatggaa 43150631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 39850499 - 39850363
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactt-tgagaaaattatggatttaaagaaatcatggt 116  Q
    |||||||||| || |||||||| | ||||||| |||||||| ||||| ||||||||||||||||||| |||||||||||||||||| | |||||||||||    
T  39850499 aattccttaggtgcttttcgtatgattcttaactaaaaatatatatt-ttttggatataacaaacttgtgagaaaattatggatttgaggaaatcatggt 39850401  T
Q  117 gaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
       |||||||||||||||| |||||| || ||||||||    
T  39850400 atttttagttaagaaccatacgaaaaacacctaaggaa 39850363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 10017131 - 10017261
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || ||||| || ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||| |  |||||||| ||    
T  10017131 aattccttaggtgcttttcatatggttcttaactaaaaatacatatt-ttttggatataacaaactttgaaaaaattatggatttgagaaaatcatgatg 10017229  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||     ||||||||||| ||||||||| ||||||||    
T  10017230 aa-----ttaagaaccatacgaaaagcacctaaggaa 10017261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 42105526 - 42105421
Alignment:
Q  29 tgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaa 128  Q
    ||||||| ||| ||||||||| |||||||||| ||| |||| || |||||||||||||||| ||||||||||||||  |||||| |||||||||||||||    
T  42105526 tgttttttgtatggttcttaactaaaaataca-atttttttagagataacaaactttgagagaattatggatttaagaaaatcacggtgaatttagttaa 42105428  T
Q  129 gaaccat 135  Q
    |||||||    
T  42105427 gaaccat 42105421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 37506280 - 37506165
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||| |||| ||||||||||  ||||||||| ||||||||||| || ||||||| |||||||||||||||||||||||| ||||||  ||||||| ||     
T  37506280 aattctttaggtgtttttcgtgtggttcttaactaaaaatacatttt-ttttggagataacaaactttgagaaaattatgaatttaagaaaatcat-gta 37506183  T
Q  118 aatttagttaagaaccat 135  Q
    ||||||||||||||||||    
T  37506182 aatttagttaagaaccat 37506165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 35368797 - 35368873
Alignment:
Q  66 ttttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaa 142  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| |||||| ||||||    
T  35368797 ttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaaaaccatacgaaaa 35368873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 36329334 - 36329251
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggattt 102  Q
    ||||| |||| || |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36329334 aattctttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggattt 36329251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 38125333 - 38125248
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaa 104  Q
    ||||| |||| ||||||||||| ||||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  38125333 aattcattaggtgtttttcgtatggttcttaactaaaaatacatatt-ttttgtatataacaaactttaagaaaattatggatttaa 38125248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 44920776 - 44920666
Alignment:
Q  42 gttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaa 141  Q
    |||||||| |||||||||||||| |||||||||||| ||||||||||||||||||  |||| |  ||||||| || ||||||||||||||||||  ||||    
T  44920776 gttcttaactaaaaatacatatt-ttttggatataataaactttgagaaaattataaatttgagaaaatcattgtaaatttagttaagaaccataagaaa 44920678  T
Q  142 agcatctaaggaa 154  Q
    |||| ||||||||    
T  44920677 agca-ctaaggaa 44920666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 157099 - 157008
Alignment:
Q  42 gttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaacc 133  Q
    |||||||  |||||||||||||| ||||  ||||||||||||||||||||||||||||||| | ||||| ||| | ||||||||||||||||    
T  157099 gttcttagctaaaaatacatatttttttttatataacaaactttgagaaaattatggatttgaggaaattatgataaatttagttaagaacc 157008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 69 - 154
Target Start/End: Original strand, 46679328 - 46679413
Alignment:
Q  69 tggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||| |||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||| |   ||||||||| ||||||    
T  46679328 tggatttaacaaactttgagaaaattatggatttgaggaaattatggtgaatttagttaagaaccgtataaaaagcatccaaggaa 46679413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 151
Target Start/End: Original strand, 26977721 - 26977839
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| |||| |||| ||||||||||| || || || ||| || |||||||||||||||||||||||| | ||||||||  | ||||||||||||||    
T  26977721 ttttcgtatggtttttaactaaaaatacatctttttatg-atacaataaactttgagaaaattatggatttgaggaaatcatactaaatttagttaagaa 26977819  T
Q  132 ccatgcgaaaagcatctaag 151  Q
    ||||  |||||| |||||||    
T  26977820 ccatatgaaaagtatctaag 26977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 37536889 - 37537022
Alignment:
Q  20 ttccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaa 119  Q
    |||||| |||| ||||| || ||||||||  ||||| |||||||| |||||  |||||||||||||||||||||||||||||  | ||||| ||    ||    
T  37536889 ttcctttgatgcttttcatatggttcttatctaaaattacatatttttttgt-tataacaaactttgagaaaattatggattagaggaaattataaataa 37536987  T
Q  120 tttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||| | ||||| || |||||||    
T  37536988 tttagttaagaaccatacaaaaagtatttaaggaa 37537022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 26976996 - 26976864
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||| |||| ||||||||||| |||| |||| |||||||| || || |||  |||| || |||||||||||||||||||||||| |  |||||||  |     
T  26976996 aattctttaggtgtttttcgtatggtttttaactaaaaatatatctt-tttacgatacaataaactttgagaaaattatggatttgagaaaatcatacta 26976898  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||| |||||||| || ||||||||| |||||    
T  26976897 aatttaattaagaactatacgaaaagcacctaag 26976864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 39677400 - 39677305
Alignment:
Q  46 ttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaa 142  Q
    ||||||||||||| ||||| |||||   |||||||||||||| ||||||||| |||| |  ||||||| ||||||||| ||||||||||||| ||||    
T  39677400 ttaattaaaaatatatatt-ttttgtgcataacaaactttgaaaaaattatgaatttgagaaaatcatagtgaatttaattaagaaccatgcaaaaa 39677305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 46664193 - 46664276
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggattt 102  Q
    |||| ||||| | |||||||||  |||||||| |||||||||||||| ||||  |||||||||||||||||||||||||| ||||    
T  46664193 aatttcttaggtatttttcgtatagttcttaactaaaaatacatattttttta-atataacaaactttgagaaaattatgaattt 46664276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 49984001 - 49984060
Alignment:
Q  72 atataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||| ||| ||||| ||||||||||||||||  |||||||||||||||||||||||||    
T  49984001 atataataaattttgaaaaaattatggatttaagaaaatcatggtgaatttagttaagaa 49984060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 46222124 - 46222050
Alignment:
Q  77 acaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||||  |||||||||||| ||||||  |||||||||||||||||||||| |||||| |||||| || |||||    
T  46222124 acaaactaagagaaaattatgaatttaagaaaatcatggtgaatttagttaaaaaccatacgaaaaacacctaag 46222050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 154
Target Start/End: Complemental strand, 297644 - 297556
Alignment:
Q  66 ttttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||| |||||||||||| |||||||||||||||||| |  ||||  | || ||||||| |||||||||| ||||||||| | ||||||    
T  297644 ttttgaatataacaaactatgagaaaattatggatttcagaaaattgtagtaaatttagctaagaaccatacgaaaagcaccaaaggaa 297556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 20366705 - 20366744
Alignment:
Q  20 ttccttagatgtttttcgtacggttcttaattaaaaatac 59  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  20366705 ttccttagatgtttttcgtatggttcttaactaaaaatac 20366744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 32362878 - 32362932
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttgga 72  Q
    ||||| |||| ||||||||||| ||||||||| |||||||||||||  |||||||    
T  32362878 aattctttaggtgtttttcgtatggttcttaactaaaaatacatatatttttgga 32362932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 36657551 - 36657585
Alignment:
Q  120 tttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||| ||||||||||||||||||    
T  36657551 tttagttaagaaccatacgaaaagcatctaaggaa 36657585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 32363118 - 32363187
Alignment:
Q  66 ttttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccat 135  Q
    |||||||||||||||| ||| | |||||||||||||| |  |||| || || ||||||||||| ||||||    
T  32363118 ttttggatataacaaatttttaaaaaattatggatttgagaaaattattgtaaatttagttaataaccat 32363187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 37542117 - 37542064
Alignment:
Q  79 aaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaac 132  Q
    ||||||||| |||||||| |||||||||||||||||   |||||| ||||||||    
T  37542117 aaactttgaaaaaattattgatttaaagaaatcatgaataatttatttaagaac 37542064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 36657450 - 36657490
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaata 58  Q
    ||||||||||||| |||||||| ||||||||| ||||||||    
T  36657450 aattccttagatgcttttcgtatggttcttaactaaaaata 36657490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 39850362 - 39850402
Alignment:
Q  19 attccttagatgtttttcgtacggttcttaattaaaaatac 59  Q
    ||||||||| ||||||||||| ||||||||| |||||||||    
T  39850362 attccttaggtgtttttcgtatggttcttaactaaaaatac 39850402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 5e-49; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 40891036 - 40891165
Alignment:
Q  24 ttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaattta 123  Q
    |||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40891036 ttaggtgtttttcgtacggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaattta 40891134  T
Q  124 gttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||| ||||||||| ||||||||    
T  40891135 gttaagaaccatacgaaaagcacctaaggaa 40891165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 29781113 - 29780978
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||     
T  29781113 aattccttagatgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaattatggta 29781015  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||| |||||| ||||||||| ||||||||    
T  29781014 aatttagttaaaaaccatacgaaaagcacctaaggaa 29780978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 37114255 - 37114386
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  37114255 aattccttaggtgcttttcgtatggttcttaattaaaaatacatatt-ttttggatataataaactttgagaaaattatggatttaagaaaatcatggtg 37114353  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaa 150  Q
    |||||||||||||||||| | |||| |||||||    
T  37114354 aatttagttaagaaccatacaaaaaacatctaa 37114386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 15882217 - 15882353
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||| ||| ||||||||| |||||||||||||| ||||||||||||| ||||||||||| ||||||||||| |  |||||||||||    
T  15882217 aattccttaggtgctttttgtatggttcttaactaaaaatacatatttttttggatataactaactttgagaatattatggatttgagaaaatcatggtg 15882316  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  15882317 aatttagttaagaaccatacgaaaagcacctaaggaa 15882353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 38629491 - 38629626
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||| ||| ||| |||||||| ||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||| |||| | ||||||||||||    
T  38629491 aattctttaaatgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataataaactttgagaaaattatgaatttgaggaaatcatggtg 38629589  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| |||||| || ||||||||    
T  38629590 aatttagttaagaaccatacgaaaaacacctaaggaa 38629626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 38520035 - 38520170
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| |||| | ||||||||||||    
T  38520035 aattccttagttgcttttcgtatggttcttaactaaaaatatatatt-ttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtg 38520133  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||| || ||| |||||||||  |||||||    
T  38520134 aatttagttaaaaaacatacgaaaagcacttaaggaa 38520170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 23940959 - 23940832
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| |||| |||| |||||||||||||| ||||  |||||||||||||||||||||||| |||||| | ||||||||||||    
T  23940959 aattccttaggtgcttttcgtatggtttttaactaaaaatacatatttttttaaatataacaaactttgagaaaattacggatttgaggaaatcatggtg 23940860  T
Q  118 aatttagttaagaaccatgcgaaaagca 145  Q
    |||||||||||||| ||| |||||||||    
T  23940859 aatttagttaagaatcatacgaaaagca 23940832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 4262107 - 4261999
Alignment:
Q  41 ggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaa 140  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || | |||||||| ||||||||||||||||||||| ||||    
T  4262107 ggttcttaattaaaaatacatatt-ttttgaatataacaaactttgagaaaattatggacttgaggaaatcatagtgaatttagttaagaaccatacgaa 4262009  T
Q  141 aagcatctaa 150  Q
    ||||| ||||    
T  4262008 aagcacctaa 4261999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 151
Target Start/End: Original strand, 12234497 - 12234616
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaa-ctttgagaaaattatggatttaaagaaatcatggtgaatttagttaaga 130  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||| |||||||||||||| |    
T  12234497 ttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaaactttgagaaaattatgaatttgaggaaatcatcgtgaatttagttaata 12234595  T
Q  131 accatgcgaaaagcatctaag 151  Q
    ||||| |||||||||||||||    
T  12234596 accatacgaaaagcatctaag 12234616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 150
Target Start/End: Complemental strand, 17426770 - 17426651
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattatttt-ggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaaga 130  Q
    |||||||| ||||||||| |||||||  ||||| |||| ||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  17426770 ttttcgtatggttcttaactaaaaatgtatattttttttggatataacaaactttgagaaaattatagatttgaggaaatcatggtgaatttagttaaga 17426671  T
Q  131 accatgcgaaaagcatctaa 150  Q
    ||||| ||||||||| ||||    
T  17426670 accatacgaaaagcacctaa 17426651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 8210340 - 8210475
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| | ||||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  8210340 aattccttaggtgcttttcgtatgattcttaactaaatatatatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatg 8210438  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||| |||||||| ||| | |||| |||||||||||    
T  8210439 aatttggttaagaatcatacaaaaaacatctaaggaa 8210475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 24211432 - 24211301
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| || ||||||||||| |||| ||||||||||||| ||||||||||||||| |||| ||||| | ||||    
T  24211432 aattccttaggtgcttttcgtatggttcttaaatagaaatacatatt-ttttagatataacaaactatgagaaaattatggaattaaggaaattacggtg 24211334  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaa 150  Q
    |||||| ||||||||||| ||||||||| ||||    
T  24211333 aatttaattaagaaccatacgaaaagcacctaa 24211301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 35467211 - 35467322
Alignment:
Q  41 ggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaa 140  Q
    ||||||||| ||||||||||| || |||||||  ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  35467211 ggttcttaactaaaaatacatctt-ttttggag-taacaaactttaagaaaattatggatttaaagaaatcatgatgaatttagttaagaaccatacgaa 35467308  T
Q  141 aagcatctaaggaa 154  Q
    |||||  |||||||    
T  35467309 aagcacataaggaa 35467322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 151
Target Start/End: Complemental strand, 33100785 - 33100667
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||||| | ||||| | |||   ||||||||||||    
T  33100785 ttttcgtacggttcttaactaaaaaaacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaataacggtatttttagttaagaa 33100687  T
Q  132 ccatgcgaaaagcatctaag 151  Q
    |||| ||||||||| |||||    
T  33100686 ccatacgaaaagcacctaag 33100667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 24741963 - 24741842
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| ||||||||||  | || ||| |||||| ||||| ||||||||| |||||||| | ||||||||||||||||||||||||||    
T  24741963 ttttcgtatggttcttaactaaaaatacacct-atgttgcatataataaactctgagaaaatcatggatttgaggaaatcatggtgaatttagttaagaa 24741865  T
Q  132 ccatgcgaaaagcatctaaggaa 154  Q
    |||| ||||||||| ||||||||    
T  24741864 ccatacgaaaagcacctaaggaa 24741842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 38405169 - 38405272
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||| ||| ||||||||| ||||||||||| || |||||||||||||||||||||||||||||| | ||||||  |||||||  ||||||||||||||||    
T  38405169 tttttgtatggttcttaactaaaaatacatctttttttggatataacaaactttgagaaaattacgaatttaagaaaatcattatgaatttagttaagaa 38405268  T
Q  132 ccat 135  Q
    ||||    
T  38405269 ccat 38405272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 11828698 - 11828618
Alignment:
Q  71 gatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaag 151  Q
    ||||||||||||||||||||||| |||||||| | ||||| |||||||||||||||||||||||| |||||| || |||||    
T  11828698 gatataacaaactttgagaaaataatggatttgaggaaattatggtgaatttagttaagaaccatacgaaaaacacctaag 11828618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 14834811 - 14834691
Alignment:
Q  32 ttttcgtacggttctt--aattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaag 129  Q
    ||||||||||||| ||  || ||||||||||| || ||||| ||||||||||||||||   ||||||| ||||||  |||||||||||||||||||||||    
T  14834811 ttttcgtacggtttttttaactaaaaatacatctt-ttttgtatataacaaactttga---aattatgaatttaagaaaatcatggtgaatttagttaag 14834716  T
Q  130 aaccatgcgaaaagcatctaaggaa 154  Q
    |||||| |||||||||  |||||||    
T  14834715 aaccatacgaaaagcacgtaaggaa 14834691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 5356267 - 5356153
Alignment:
Q  29 tgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaatt-atggatttaaagaaatcatggtgaatttagtta 127  Q
    ||||||||||| | |||||||||||||||||||||| ||||   ||||| ||||||| | |||| | ||||||||||  |||| |||||||||||||| |    
T  5356267 tgtttttcgtatgattcttaattaaaaatacatatt-ttttaattataataaactttaaaaaaaatgatggatttaagaaaattatggtgaatttagtca 5356169  T
Q  128 agaaccatgcgaaaag 143  Q
    ||||||||||||||||    
T  5356168 agaaccatgcgaaaag 5356153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 40393751 - 40393855
Alignment:
Q  29 tgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaa 128  Q
    |||||||| || | ||||||| |||||||||||||| ||| |||||||||||| |||||||||||||   |||| | ||||| ||||||||||||| |||    
T  40393751 tgtttttcttatgattcttaactaaaaatacatatt-tttgggatataacaaattttgagaaaatta-aaatttgaggaaattatggtgaatttagctaa 40393848  T
Q  129 gaaccat 135  Q
    |||||||    
T  40393849 gaaccat 40393855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 4035772 - 4035837
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatgg 98  Q
    |||||||| ||| ||||| |||||||| ||||| |||||||||||||||| ||||||||||| ||||    
T  4035772 ttttcgtatggtacttaactaaaaatatatatt-ttttggatataacaaattttgagaaaatcatgg 4035837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 7959948 - 7959858
Alignment:
Q  46 ttaattaaaaatacatattattttggat-ataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccat 135  Q
    |||| |||||||||||||| ||||  || |||||||||||||||| || ||| ||||| | |||||||| |  ||||||||||||||||||    
T  7959948 ttaactaaaaatacatatttttttttattataacaaactttgagacaactatagattttaggaaatcatagcaaatttagttaagaaccat 7959858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 10778688 - 10778768
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcat 113  Q
    |||||||| ||||||||| ||||||||||| || || ||| |||||||||||||||||| ||| || |||| | ||||||||    
T  10778688 ttttcgtatggttcttaactaaaaatacat-tttttgtggctataacaaactttgagaagattgtgaatttgaggaaatcat 10778768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 25264328 - 25264277
Alignment:
Q  72 atataacaaactttgagaaaattatggatttaaagaaatcatggtgaattta 123  Q
    |||||||||||||| ||||||||||| |||| | |||||||| |||||||||    
T  25264328 atataacaaactttaagaaaattatgaatttgaggaaatcattgtgaattta 25264277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 29781077 - 29781111
Alignment:
Q  120 tttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||| ||||||||||||||||||    
T  29781077 tttagttaagaaccatacgaaaagcatctaaggaa 29781111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 1924135 - 1924002
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  1924135 aattccttaggtgtttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtg 1924036  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||||||||||||||| ||||||||| |||||    
T  1924035 aatttagttaagaaccatacgaaaagcacctaag 1924002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 24101986 - 24101851
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||     
T  24101986 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatggta 24101888  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
     ||||||||||||||||| ||||||||| ||||||||    
T  24101887 tatttagttaagaaccatacgaaaagcacctaaggaa 24101851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 45408642 - 45408777
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||     
T  45408642 aattccttaggtgttttttgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatggta 45408740  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||| ||||||||||| ||||||||| ||||||||    
T  45408741 aatttaattaagaaccatacgaaaagcacctaaggaa 45408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 23835893 - 23836018
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||     
T  23835893 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggta 23835992  T
Q  118 aatttagttaagaaccatgcgaaaag 143  Q
    ||||| ||||| |||||| |||||||    
T  23835993 aattttgttaaaaaccatacgaaaag 23836018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 2818683 - 2818806
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| | ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  2818683 aattccttaggtgcttttcgtatgattcttaactaaaaatacatatt-ttttggatatatcaaactttgagaaaattatggatttgaggaaatcatggtg 2818781  T
Q  118 aatttagttaagaaccatgcgaaaa 142  Q
    |||||||||||||||||| ||||||    
T  2818782 aatttagttaagaaccatacgaaaa 2818806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 12850696 - 12850561
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||||| ||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||     
T  12850696 aattcctcagatgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatggta 12850598  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||| |||||| | ||||| | ||||||||    
T  12850597 aatttagttaaaaaccatacaaaaagtacctaaggaa 12850561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 22269739 - 22269874
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||||||| | || |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| |     
T  22269739 aattccttaggtgtttttcgtatgatttttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatgttt 22269837  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
      |||||||||||||||| ||||||||||||||||||    
T  22269838 tttttagttaagaaccatacgaaaagcatctaaggaa 22269874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 34490473 - 34490608
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||| |||| ||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | | |||||||||||     
T  34490473 aattctttaggtgtttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatctgaggaaatcatggta 34490571  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
      |||||||||||||||| ||||||||| ||||||||    
T  34490572 tttttagttaagaaccatacgaaaagcacctaaggaa 34490608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 7737081 - 7737217
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| || |||| ||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||| | |||||||||||     
T  7737081 aatttcttaggtgcttttggtatgattcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggctttgaggaaatcatggta 7737180  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||| ||| ||||||||| ||||||||    
T  7737181 aatttagttaagaatcatacgaaaagcacctaaggaa 7737217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 16705750 - 16705885
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||| ||| |  ||||||| |||    
T  16705750 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgataaaattatggctttgagaaaatcatagtg 16705848  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||| |||||| ||||||||| ||||||||    
T  16705849 aatttagttaaaaaccatacgaaaagcacctaaggaa 16705885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 27920589 - 27920720
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| || |||||||| || |||||| ||||| |||||||| |||||||||||||||||||||| |||||||||||||| | ||||||||||||    
T  27920589 aatttcttaggtgcttttcgtatgggtcttaactaaaactacatatt-ttttggatataacaaactttgaaaaaattatggatttgaggaaatcatggtg 27920687  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaa 150  Q
    |||||||||||||||||| ||||||||| ||||    
T  27920688 aatttagttaagaaccatacgaaaagcagctaa 27920720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 42713907 - 42713796
Alignment:
Q  43 ttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaa 142  Q
    ||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||    
T  42713907 ttcttaactaaaaatacatatttttttggatataataaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccatacgaaaa 42713808  T
Q  143 gcatctaaggaa 154  Q
     || ||||||||    
T  42713807 acacctaaggaa 42713796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 3116907 - 3117028
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||||||  ||||||||||||||||    
T  3116907 ttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgagaaaatcataatgaatttagttaagaa 3117005  T
Q  132 ccatgcgaaaagcatctaaggaa 154  Q
    |||| ||||||||| ||| ||||    
T  3117006 ccatacgaaaagcagctatggaa 3117028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 9850900 - 9850781
Alignment:
Q  29 tgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaa 128  Q
    ||||||||||| ||||||||| |||||||||||||| |||  ||||||||||| ||||||||||||||||||||||  |||||||||| |||||||||||    
T  9850900 tgtttttcgtatggttcttaactaaaaatacatatttttt--gatataacaaattttgagaaaattatggatttaagaaaatcatggtaaatttagttaa 9850803  T
Q  129 gaaccatgcgaaaagcatctaa 150  Q
    ||||||| ||||||||| ||||    
T  9850802 gaaccatacgaaaagcacctaa 9850781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 9281501 - 9281366
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| |  |||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| |||| | |||||||| |||    
T  9281501 aattccttaggtccttttcgtatggttcttaactaaaaatatatatt-ttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtg 9281403  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||||||  |||||| | ||||||||    
T  9281402 aatttagttaagaaccatatgaaaagtacctaaggaa 9281366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 34455902 - 34456025
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| | ||||| ||| ||    
T  34455902 aattccttaggtgcttttcgtatggttcttaattaaaaatacatatt-ttttggatataacaaactttgagaaaattatagatttgaggaaattatgatg 34456000  T
Q  118 aatttagttaagaaccatgcgaaaa 142  Q
    |||||| ||| ||||||| ||||||    
T  34456001 aatttaattaggaaccatacgaaaa 34456025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 9933723 - 9933597
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| || |||||||| ||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||||||| |  |||||||||||    
T  9933723 aatttcttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttagatataataaactttgagaaaattatggatttgagaaaatcatggtg 9933625  T
Q  118 aatttagttaagaaccatgcgaaaagca 145  Q
    ||||||||||||||||||  ||||||||    
T  9933624 aatttagttaagaaccataggaaaagca 9933597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 20892901 - 20893037
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| || |||||||| ||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||| | ||||| || ||     
T  20892901 aatttcttaggtgcttttcgtatggttcttaactaaaaatacatatttttatggatataacaaactttgagaaaattatggatttgatgaaattattgta 20893000  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
      |||||||||||| ||| ||||||||| ||||||||    
T  20893001 tttttagttaagaatcatacgaaaagcacctaaggaa 20893037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 43475961 - 43476098
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattatttt-ggatataacaaactttgagaaaattatggatttaaagaaatcatggt 116  Q
    ||||||| || || |||||||| |||| | || |||||||| ||||| |||| |||||||| ||||||||||||||||||| |||| | |||||||||||    
T  43475961 aattcctcaggtgattttcgtatggttttaaactaaaaatatatattttttttggatataataaactttgagaaaattatgaatttgaggaaatcatggt 43476060  T
Q  117 gaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||||||| |||||| || ||||||||    
T  43476061 gaatttagttaagaaccatacgaaaaacacctaaggaa 43476098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 6605777 - 6605882
Alignment:
Q  43 ttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaa 142  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||| | ||||||||||| ||||||| |||||||||| | ||||    
T  6605777 ttcttaactaaaaatacatattattt-ggatataacaaactttgagaaaattatgcatttgaggaaatcatggtaaatttag-taagaaccatacaaaaa 6605874  T
Q  143 gcatctaa 150  Q
    ||| ||||    
T  6605875 gcacctaa 6605882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 29229504 - 29229394
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaacttt-gagaaaattatggatttaaagaaatcatggtgaatttagttaaga 130  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||||||| | ||||||||| ||||| |||||||||    
T  29229504 ttttcgtatggttcttaactaaaaatacatatt-ttttggatataataaacttttgagaaaattatggatttgaggaaatcatgatgaatatagttaaga 29229406  T
Q  131 accatgcgaaaa 142  Q
    | ||| ||||||    
T  29229405 atcatacgaaaa 29229394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 29342804 - 29342694
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaacttt-gagaaaattatggatttaaagaaatcatggtgaatttagttaaga 130  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||||||| | ||||||||| ||||| |||||||||    
T  29342804 ttttcgtatggttcttaactaaaaatacatatt-ttttggatataataaacttttgagaaaattatggatttgaggaaatcatgatgaatatagttaaga 29342706  T
Q  131 accatgcgaaaa 142  Q
    | ||| ||||||    
T  29342705 atcatacgaaaa 29342694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 7116387 - 7116519
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||| ||||||  |||||||| |||||| || ||||||||||  || | ||||||| ||||| ||||||||||||||||||||| | ||||| |||||     
T  7116387 aattctttagatacttttcgtatggttctcaactaaaaatacacctt-tgttggatagaacaatctttgagaaaattatggatttgatgaaattatggta 7116485  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||| ||||||||||| |||||| ||||||||    
T  7116486 aatttatttaagaaccatacgaaaaacatctaag 7116519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 17434835 - 17434755
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatgg 98  Q
    |||||||||||||||||||||| | ||||||| |||| | | ||||| |||||||||||||||||||||||||||||||||    
T  17434835 aattccttagatgtttttcgtatgattcttaactaaataaatatatttttttggatataacaaactttgagaaaattatgg 17434755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 40362547 - 40362622
Alignment:
Q  66 ttttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaa 142  Q
    ||||| |||||||||||| ||||||||||||| |||| |  ||||||||||||||||||||||||||||| ||||||    
T  40362547 ttttgaatataacaaactatgagaaaattatg-atttgagaaaatcatggtgaatttagttaagaaccatacgaaaa 40362622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 39243137 - 39243014
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||| |||| | ||||| ||| ||||||| | ||||||||||  | || |||||||||||||||||||| ||||| ||  |||| | ||||||| | |     
T  39243137 aattctttaggtattttttgtatggttcttgactaaaaatacacct-atgttggatataacaaactttgataaaatcataaatttgatgaaatcacgata 39243039  T
Q  118 aatttagttaagaaccatgcgaaaa 142  Q
    |||||||||||||| ||| ||||||    
T  39243038 aatttagttaagaatcatacgaaaa 39243014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 10552986 - 10553033
Alignment:
Q  107 aaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||||||||||||| ||| |||||| || ||||||||    
T  10552986 aaatcatggtgaatttagttaagaatcatacgaaaaacacctaaggaa 10553033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 5e-46; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 8091079 - 8091211
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  8091079 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttaaggaaatcacggtg 8091177  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||||||||||||||| ||||||||| |||||    
T  8091178 aatttagttaagaaccatacgaaaagcacctaag 8091211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 15546649 - 15546784
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||     
T  15546649 aattccttagttgttttttgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatggta 15546747  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||| ||||||||||| ||||||||| ||||||||    
T  15546748 aatttaattaagaaccatacgaaaagcacctaaggaa 15546784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 21380095 - 21379960
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| |||| | ||||||||||||    
T  21380095 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaacattgagaaaattatgaatttgaggaaatcatggtg 21379997  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  21379996 aatttagttaagaaccatacgaaaagcacctaaggaa 21379960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 20501723 - 20501855
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||     
T  20501723 aattccttaggtgtttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaacttcgagaaaattatggatttgaagaaatcatggta 20501821  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
      |||||||||||||||| ||||||||| |||||    
T  20501822 tttttagttaagaaccatacgaaaagcacctaag 20501855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 11687297 - 11687162
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||||||| |     
T  11687297 aattccttagatgcttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgata 11687199  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
      |||||||||||||||| ||||||||||||||||||    
T  11687198 tttttagttaagaaccatacgaaaagcatctaaggaa 11687162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 14393578 - 14393716
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatatta--ttttggatataacaaactttgagaaaattatggatttaaagaaatcatgg 115  Q
    |||||||||| || |||||||| | ||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  14393578 aattccttaggtgcttttcgtatgattcttaactaaaaatacatatttctttttggatataacaaactttgagaaaattatggatttgaggaaatcatgg 14393677  T
Q  116 tgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||||| | ||||||| ||||||||    
T  14393678 tgaatttagttaagaaccatacaaaaagcacctaaggaa 14393716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 142
Target Start/End: Original strand, 13439726 - 13439836
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  13439726 ttttcgtatggttcttagctaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 13439825  T
Q  132 ccatgcgaaaa 142  Q
    |||| ||||||    
T  13439826 ccatacgaaaa 13439836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 18998271 - 18998157
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  | ||||||||||||    
T  18998271 aattccttaggtgcttttcgtatggttcttaattaaaaatacatattttttttgatataacaaactttgagaaaattatggattcgaggaaatcatggtg 18998172  T
Q  118 aatttagttaagaac 132  Q
    |||||||||||||||    
T  18998171 aatttagttaagaac 18998157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 29609032 - 29609153
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||  ||||||||| ||||||||||| || ||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||    
T  29609032 ttttcgtgtggttcttaactaaaaatacatctt-ttttggagataacaaactttgagaaaattatggatttaaggaaatcacggtgaatttagttaaaaa 29609130  T
Q  132 ccatgcgaaaagcatctaaggaa 154  Q
    |||| ||||||||||||||||||    
T  29609131 ccatacgaaaagcatctaaggaa 29609153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 4890635 - 4890502
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| ||||||  |||||| |||||||||||||||||||||||||||||||| |||| | |||||||||||     
T  4890635 aattccttaggtgcttttcgtatggttcttaactaaaaacgcatatttttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggta 4890536  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||||||||||||||| |||||| || |||||    
T  4890535 aatttagttaagaaccatacgaaaaacacctaag 4890502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 13172729 - 13172598
Alignment:
Q  16 caaattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatgg 115  Q
    |||||||||||  ||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| ||      
T  13172729 caaattccttaagtgtttttcgtatggttcttaagtaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatgat-a 13172632  T
Q  116 tgaatttagttaagaaccatgcgaaaagcatcta 149  Q
    |||||||||||||||||||| |||||| ||||||    
T  13172631 tgaatttagttaagaaccatacgaaaaacatcta 13172598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 885402 - 885537
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||||||| ||    
T  885402 aattccttaggtgctttttgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgagaaaatcatgatg 885500  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||| |||  |||||||| ||||||||    
T  885501 aatttagttaagaatcataggaaaagcacctaaggaa 885537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 3369002 - 3369133
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| |||| | ||||||||||||    
T  3369002 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttgaatataacaaactttgagaaaattatgaatttgaggaaatcatggtg 3369100  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaa 150  Q
    |||||||||| |||| || ||||||||| ||||    
T  3369101 aatttagttaggaacgatacgaaaagcacctaa 3369133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 7808626 - 7808761
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||||||  |||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||| | |||||||||||     
T  7808626 aattccttaggtgtttttcgtttggtttttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatagatttgaggaaatcatggta 7808724  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
      |||||||||||||||| ||||||||| ||||||||    
T  7808725 tttttagttaagaaccatacgaaaagcacctaaggaa 7808761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 4238883 - 4238997
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattatttt-ggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaaga 130  Q
    |||| ||| |||||| ||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| |  ||||||||||||||||| ||||||    
T  4238883 tttttgtatggttctcaattaaaaatacatattttttttggatataacaaactttgagaaaattaaggatttgagaaaatcatggtgaatttaattaaga 4238982  T
Q  131 accatgcgaaaagca 145  Q
    ||||| | |||||||    
T  4238983 accatacaaaaagca 4238997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 17279541 - 17279657
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataaca---aactttgagaaaattatggatttaaagaaatcatg 114  Q
    |||| ||||| | ||||||||| |||||||||||||||||||||||| ||||| ||||||||   |||||||| ||||||||| |||| |||||||||||    
T  17279541 aatttcttaggtatttttcgtatggttcttaattaaaaatacatatt-ttttgaatataacaacaaactttgataaaattatgaatttgaagaaatcatg 17279639  T
Q  115 gtgaatttagttaagaac 132  Q
     |||||||||||||||||    
T  17279640 atgaatttagttaagaac 17279657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 31764479 - 31764363
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| |||||||  ||||||||  |||||||| |||| ||||||||| ||||||||| |||||||||||||||||||||| |||| |  |||| ||||||    
T  31764479 aatttcttagatacttttcgtatagttcttaactaaagatacatatt-ttttggatacaacaaactttgagaaaattatgaatttgagaaaataatggtg 31764381  T
Q  118 aatttagttaagaaccat 135  Q
    ||||||||||||||||||    
T  31764380 aatttagttaagaaccat 31764363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 4076649 - 4076723
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaat 93  Q
    ||||| ||| |||||||||||| ||||||||||||||| |||||||| ||||||  |||||||||| |||||||||    
T  4076649 aattctttaaatgtttttcgtatggttcttaattaaaactacatatttttttgg-cataacaaactatgagaaaat 4076723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 6433751 - 6433806
Alignment:
Q  96 tggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaag 151  Q
    ||||||| | |||||||| ||||||||||||||||||||| ||||||||| |||||    
T  6433751 tggatttgaggaaatcatagtgaatttagttaagaaccatacgaaaagcacctaag 6433806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 34522391 - 34522329
Alignment:
Q  42 gttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaa 104  Q
    |||||||| ||||| || | ||| |||||||||||||||||||| ||||||||||| ||||||    
T  34522391 gttcttaactaaaattaaagatttttttggatataacaaactttaagaaaattatgaatttaa 34522329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 2599156 - 2599098
Alignment:
Q  72 atataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    ||||||||| |||||| ||||||||| |||| || |||||||||| ||||||||||||||    
T  2599156 atataacaagctttga-aaaattatgaatttgaacaaatcatggttaatttagttaagaa 2599098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 11687261 - 11687295
Alignment:
Q  120 tttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||| ||||||||||||||||||    
T  11687261 tttagttaagaaccatacgaaaagcatctaaggaa 11687295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 17367158 - 17367117
Alignment:
Q  72 atataacaaactttgagaaaattatggatttaaagaaatcat 113  Q
    |||||||||||||||||||||||||| |||| | ||||||||    
T  17367158 atataacaaactttgagaaaattatgaatttgatgaaatcat 17367117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 4179180 - 4179098
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggattt 102  Q
    ||||| ||| |||||||||||| ||||||||| ||||| |||||||| ||||||  |||  ||||| ||||||||||||| ||||    
T  4179180 aattctttaaatgtttttcgtatggttcttaactaaaactacatatt-ttttgg-catactaaactatgagaaaattatgaattt 4179098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 11687160 - 11687200
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaata 58  Q
    ||||||||||||| |||||||| ||||||||| ||||||||    
T  11687160 aattccttagatgcttttcgtatggttcttaactaaaaata 11687200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 20184393 - 20184257
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  20184393 aattccttagctgcttttcgtatgattcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtg 20184294  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||| ||| ||||||||| ||||||||    
T  20184293 aatttagttaagaatcatacgaaaagcacctaaggaa 20184257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 30594710 - 30594845
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||| |  |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  30594710 aattccttaggtgcttttcgcatagttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtg 30594808  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||||||||||||    
T  30594809 aatttagttaagaaccatacgaaaagcatctaaggaa 30594845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 35339418 - 35339297
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  35339418 ttttcgtatggttcttaaataaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaagaaatcatgatgaatttagttaagaa 35339320  T
Q  132 ccatgcgaaaagcatctaaggaa 154  Q
    |||| ||||||||| ||||||||    
T  35339319 ccatacgaaaagcacctaaggaa 35339297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 24836037 - 24836172
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| || |||||||| |||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  24836037 aattgcttaggtgcttttcgtatggttctnaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtg 24836135  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  24836136 aatttagttaagaaccatacgaaaagcacctaaggaa 24836172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 38883238 - 38883373
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| |     
T  38883238 aattccttagatgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaatcatgata 38883336  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
      |||||||||||||||| ||||||||||||||||||    
T  38883337 tttttagttaagaaccatacgaaaagcatctaaggaa 38883373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 34052298 - 34052431
Alignment:
Q  20 ttccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaa 119  Q
    |||||||| || |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||||||||    
T  34052298 ttccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaa 34052396  T
Q  120 tttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||| |||||||||| ||||||||| ||||||||    
T  34052397 tttagctaagaaccatacgaaaagcacctaaggaa 34052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 31231770 - 31231633
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttgga--tataacaaactttgagaaaattatggatttaaagaaatcatgg 115  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| |||||||  |||||||||||||||||||||||||||||| | ||||||||||    
T  31231770 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggacatataacaaactttgagaaaattatggatttgaggaaatcatgg 31231672  T
Q  116 tgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||||| | ||||||| ||||||||    
T  31231671 tgaatttagttaagaaccatacaaaaagcacctaaggaa 31231633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 10936624 - 10936489
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| |||||| |||||||||||||||||||||||| ||||| | ||| ||||||||    
T  10936624 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggttataacaaactttgagaaaattatagatttgaggaagtcatggtg 10936526  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||| | ||||||||| ||||||||    
T  10936525 aatttagttaagaaccgtacgaaaagcacctaaggaa 10936489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 30259220 - 30259085
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||| | || |||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  30259220 aattccttgggtgctttttgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtg 30259122  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||||||  |||||||| ||||||||    
T  30259121 aatttagttaagaaccataggaaaagcacctaaggaa 30259085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 45997662 - 45997536
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||  ||| ||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  45997662 aattccttaggtgttttaggtatggttcttaactaaaaatacatatt-ttttggatataataaactttgagaaaattatggatttgaggaaatcatggtg 45997564  T
Q  118 aatttagttaagaaccatgcgaaaagca 145  Q
    |||||||||||||||||| | |||||||    
T  45997563 aatttagttaagaaccatacaaaaagca 45997536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 39617996 - 39617863
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||| |||| || ||||||||  |||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  39617996 aattctttaggtgcttttcgtatagttcttaactaaaaataaatatttttttggatataacaaactttgagaaaattatggattggaggaaatcatggtg 39617897  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||||||||||||||| |||| | ||||||||    
T  39617896 aatttagttaagaaccatacgaagaacatctaag 39617863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 143
Target Start/End: Complemental strand, 3953182 - 3953072
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||    
T  3953182 tttttgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaaaaa 3953084  T
Q  132 ccatgcgaaaag 143  Q
    |||| |||||||    
T  3953083 ccatacgaaaag 3953072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 37093785 - 37093909
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| | ||||||||| | |||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||| | ||||||||||||    
T  37093785 aatttcttaggtatttttcgtatgattcttaattaaaaatatatatt-ttttggatataacaaactttgagaaaattataaatttgaggaaatcatggtg 37093883  T
Q  118 aatttagttaagaaccatgcgaaaag 143  Q
    ||||||||||| |||||| |||||||    
T  37093884 aatttagttaaaaaccatacgaaaag 37093909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 153
Target Start/End: Original strand, 40358146 - 40358266
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| ||||||| |||||| ||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  40358146 ttttcgtatggttcttaactaaaaatgcatatttttttg-atataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaa 40358244  T
Q  132 ccatgcgaaaagcatctaagga 153  Q
     |||  |||||||| |||||||    
T  40358245 tcataggaaaagcacctaagga 40358266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 145
Target Start/End: Complemental strand, 9285854 - 9285742
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||  |||| | |||||||||||||||||| |||||||    
T  9285854 ttttcgtatggttcttaaataaaaatacatatt-ttttggatataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaagaa 9285756  T
Q  132 ccatgcgaaaagca 145  Q
    |||| | |||||||    
T  9285755 ccatacaaaaagca 9285742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 145
Target Start/End: Complemental strand, 9289921 - 9289809
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||  |||| | |||||||||||||||||| |||||||    
T  9289921 ttttcgtatggttcttaaataaaaatacatatt-ttttggatataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaagaa 9289823  T
Q  132 ccatgcgaaaagca 145  Q
    |||| | |||||||    
T  9289822 ccatacaaaaagca 9289809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 41 - 142
Target Start/End: Original strand, 12142232 - 12142333
Alignment:
Q  41 ggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaa 140  Q
    ||||||||| |||||||| ||||  ||||||||||||||| ||||||||||||||||||||| |  |||||||||||||||||||||||||| || ||||    
T  12142232 ggttcttaactaaaaatatatatatttttggatataacaatctttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaactatacgaa 12142331  T
Q  141 aa 142  Q
    ||    
T  12142332 aa 12142333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 24123897 - 24123793
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattatttt-ggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaaga 130  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| | |||||||| ||   |||||||| ||    
T  24123897 ttttcgtatggttcttaattaaaaatacatattttttttggatataacaaactttgagaaaattatggatttgaggaaatcatagtatttttagttagga 24123798  T
Q  131 accat 135  Q
    |||||    
T  24123797 accat 24123793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 30594909 - 30594968
Alignment:
Q  155 ccataagttgtgcttagagaactaaaagccataattgataattaaaatcataatattcat 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30594909 ccataagttgtgcttagagaactaaaagccataattgataattaaaatcataatattcat 30594968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 48103385 - 48103513
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| ||||||||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||  ||||||||||| | |||||||    |    
T  48103385 aatttcttaggtgtttttcgtatgattcttaactaaaaatacatatt-ttttggatataacaaactttgagattattatggatttgaggaaatca---cg 48103480  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaa 150  Q
    |||||||||||||||||| | ||||||| ||||    
T  48103481 aatttagttaagaaccatacaaaaagcacctaa 48103513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 151
Target Start/End: Complemental strand, 31521655 - 31521547
Alignment:
Q  42 gttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaa 141  Q
    |||||||| |||||||  ||||| |||||||||||| ||||||||| ||||||||| |||| |  |||||||||| |||||||||||||||||| |||||    
T  31521655 gttcttaactaaaaatgaatatt-ttttggatataataaactttgaaaaaattatgaatttgagaaaatcatggtaaatttagttaagaaccatacgaaa 31521557  T
Q  142 agcatctaag 151  Q
    ||||||||||    
T  31521556 agcatctaag 31521547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 25742571 - 25742473
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||     ||||||||||||||||    
T  25742571 ttttcgtatggttgttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgaggaaat----atgaatttagttaagaa 25742477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 147
Target Start/End: Complemental strand, 39143813 - 39143738
Alignment:
Q  72 atataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatc 147  Q
    ||||||||||||||||||| ||||||||||| | ||||| |||||||||||||| ||||||||| |||||||||||    
T  39143813 atataacaaactttgagaatattatggatttgaggaaattatggtgaatttagtcaagaaccatacgaaaagcatc 39143738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 33749660 - 33749777
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttg-gatataacaaactttgagaaaattatggatttaaagaaatcatggt 116  Q
    ||||| |||| | ||||||||| | ||||||| ||||||||   ||||||||  ||||||| ||||||||||||||||||| |||||| ||||||||| |    
T  33749660 aattctttaggtatttttcgtatgattcttaactaaaaatatc-attatttttagatataataaactttgagaaaattatgaatttaaggaaatcatgat 33749758  T
Q  117 gaatttagttaagaaccat 135  Q
    |||||||||||||||||||    
T  33749759 gaatttagttaagaaccat 33749777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 38528566 - 38528464
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttgg-atataacaaactttgagaaaattatggatttaaagaaatcatggt 116  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| ||||   ||||||||||||||||||||||||||||||  | ||| |||||||    
T  38528566 aattccttaggtgcttttcgtatggttcttaactaaaaatacatattttttttttatataacaaactttgagaaaattatggattcgaggaattcatggt 38528467  T
Q  117 gaa 119  Q
    |||    
T  38528466 gaa 38528464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 29277869 - 29277963
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaa 128  Q
    |||| ||| ||||||||| ||||||||||   | ||||||||| |||||| |||||||||||| ||||||||| |||||||||||||||||||||||    
T  29277869 tttttgtatggttcttaactaaaaatacac--tgttttggatacaacaaagtttgagaaaattttggatttaaggaaatcatggtgaatttagttaa 29277963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 35665770 - 35665691
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatgg 98  Q
    |||||||||| || |||||||| |||| |||| |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  35665770 aattccttaggtgcttttcgtatggtttttaactaaaaatacatatt-ttttggatataacaaactttgagaaaatcatgg 35665691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 10398390 - 10398471
Alignment:
Q  73 tataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| |||||| |||| | ||||||||||  |||||||||||||||||| | |||||||| |||||||    
T  10398390 tataacaaactttgagaagattatgtatttgaggaaatcatggataatttagttaagaaccatacaaaaagcatataaggaa 10398471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 44148722 - 44148777
Alignment:
Q  77 acaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaac 132  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||| ||||||||    
T  44148722 acaaactttgagaaaattatggatttaaggaaatcacagtgaatttaattaagaac 44148777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 21581240 - 21581184
Alignment:
Q  79 aaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccat 135  Q
    ||||||||  ||||| ||||||||||| |||||||| ||||||||||||||||||||    
T  21581240 aaactttgcaaaaatcatggatttaaaaaaatcatgatgaatttagttaagaaccat 21581184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 22723383 - 22723257
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaa-tacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggt 116  Q
    ||||| ||||||| ||||| || |||| ||||||||||| ||||| || |||||  |||||||||||||||||||||||   |||||| ||||||| | |    
T  22723383 aattctttagatgcttttcctatggtttttaattaaaaaatacatctt-ttttgagtataacaaactttgagaaaattaaaaatttaaggaaatcacgat 22723285  T
Q  117 ga--atttagttaagaaccatgcgaaaa 142  Q
    ||  ||||||||||||| ||| ||||||    
T  22723284 gaatatttagttaagaatcatacgaaaa 22723257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 38989214 - 38989102
Alignment:
Q  31 tttttcgtacggttcttaattaaaaatacatat-tattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaag 129  Q
    ||||||||| |||| |||| | |||||||| |  ||| || |||||||||||||||||||||||||| |||||||  |||| ||| | |||||||||||     
T  38989214 tttttcgtatggttattaactgaaaatacacacctatattagatataacaaactttgagaaaattatagatttaagaaaattatgataaatttagttaaa 38989115  T
Q  130 aaccatgcgaaaa 142  Q
    ||| || ||||||    
T  38989114 aactatacgaaaa 38989102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 47237568 - 47237497
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttgg--atataacaaactttgagaaaattatggatt 101  Q
    |||||||| ||||||||| ||||||||||| || ||||    ||||||||||||||||||||||||||||||    
T  47237568 ttttcgtatggttcttaactaaaaatacatttttttttttttatataacaaactttgagaaaattatggatt 47237497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 116
Target Start/End: Original strand, 21595125 - 21595168
Alignment:
Q  73 tataacaaactttgagaaaattatggatttaaagaaatcatggt 116  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  21595125 tataacaaactttgaaaaaattatgaatttaaagaaatcatggt 21595168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 115
Target Start/End: Original strand, 25572883 - 25572925
Alignment:
Q  73 tataacaaactttgagaaaattatggatttaaagaaatcatgg 115  Q
    |||||||||||||||||||||||||| ||| ||||||||||||    
T  25572883 tataacaaactttgagaaaattatggttttgaagaaatcatgg 25572925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 16876560 - 16876487
Alignment:
Q  69 tggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaa 142  Q
    ||||||||||||||| | ||||||||| |||||| |  |||||||||| ||||||  |||||||||| ||||||    
T  16876560 tggatataacaaactctaagaaaattacggatttgagaaaatcatggtaaatttaagtaagaaccatacgaaaa 16876487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 1072274 - 1072358
Alignment:
Q  41 ggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaat--catggtgaatttagtt 126  Q
    ||||||||||||||||||||| || |||   ||||||||||||  ||| ||||||| ||||| | |||||  ||||||||||||||||    
T  1072274 ggttcttaattaaaaatacatttttttt---atataacaaactcagaggaaattatagatttgaggaaatcacatggtgaatttagtt 1072358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 38883274 - 38883240
Alignment:
Q  120 tttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||| ||||||||||||||||||    
T  38883274 tttagttaagaaccatacgaaaagcatctaaggaa 38883240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 38528407 - 38528459
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttg 70  Q
    ||||||||| ||| |||| ||| ||||||||| |||||||||||||| |||||    
T  38528407 aattccttaaatgctttttgtatggttcttaactaaaaatacatatttttttg 38528459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 38883375 - 38883335
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaata 58  Q
    ||||||||||||| |||||||| ||||||||| ||||||||    
T  38883375 aattccttagatgcttttcgtatggttcttaactaaaaata 38883335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 7103 - 7238
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| ||||||||||| | ||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  7103 aattccttaggtgtttttcgtatgattcttaactaaaaatatatat-attttggatataacaaactttgagaaaattatggatttgaggaaatcatgatg 7201  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  7202 aatttagttaagaaccatacgaaaagcacctaaggaa 7238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 48157 - 48278
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  48157 ttttcgtatggtttttaattaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaa 48255  T
Q  132 ccatgcgaaaagcatctaaggaa 154  Q
    | || ||||||||||||||||||    
T  48256 ctatacgaaaagcatctaaggaa 48278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 45851 - 45986
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  45851 aattccttaggtgctttttgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtg 45949  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||||||  |||||||| ||||||||    
T  45950 aatttagttaagaaccataagaaaagcacctaaggaa 45986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 4265999 - 4266134
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| ||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||||||||| ||||||||| ||||    
T  4265999 aatttcttaggtgtttttcgtatggttcttaactaaaaatacatatt-ttttggatgtaacaaactttaagaaaattatggatttgaagaaatcacggtg 4266097  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||| |||||| || ||||||||    
T  4266098 aatttagttaagaaccatacgaaaaacacctaaggaa 4266134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 15855860 - 15855995
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||||||| |     
T  15855860 aattccttagatgcttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgata 15855958  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
      |||||||||||||||| ||||||||||||||||||    
T  15855959 tttttagttaagaaccatacgaaaagcatctaaggaa 15855995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 16472972 - 16473107
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||||||| |     
T  16472972 aattccttagatgcttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgata 16473070  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
      |||||||||||||||| ||||||||||||||||||    
T  16473071 tttttagttaagaaccatacgaaaagcatctaaggaa 16473107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 35420766 - 35420631
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||||||| |     
T  35420766 aattccttagatgcttttcgtatggttcttaactaaaaatacatatttttttg-atataacaaactttgagaaaattatggatttgaggaaatcatgata 35420668  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
      |||||||||||||||| ||||||||||||||||||    
T  35420667 tttttagttaagaaccatacgaaaagcatctaaggaa 35420631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 24397400 - 24397284
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| |||    
T  24397400 aattccttaggtgcttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcat-gtg 24397302  T
Q  118 aatttagttaagaaccat 135  Q
    ||||||||||||||||||    
T  24397301 aatttagttaagaaccat 24397284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 20476455 - 20476583
Alignment:
Q  25 tagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttag 124  Q
    |||||| |||||||| ||||||||| |||||||||||||| || || |||||||||| |||||||||||||||||||| | ||||||||| |||||||||    
T  20476455 tagatgcttttcgtatggttcttaactaaaaatacatatttttgtg-atataacaaattttgagaaaattatggatttgaggaaatcatgatgaatttag 20476553  T
Q  125 ttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||| ||||||||| ||||||||    
T  20476554 ttaagaaccatacgaaaagcacctaaggaa 20476583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 33629501 - 33629364
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatat-tattttggatataacaaactttgagaaaattatggatttaaagaaatcatggt 116  Q
    |||||||||||||||||||||| | ||||||| |||||||| |||| | ||||||||||||||||||||||||||||||||||||| |  ||||||| ||    
T  33629501 aattccttagatgtttttcgtatgattcttaactaaaaatatatatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatagt 33629402  T
Q  117 gaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||||||| | |||||||  |||||||    
T  33629401 gaatttagttaagaaccataccaaaagcacataaggaa 33629364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 1138590 - 1138711
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||||||  ||||||||||||||||    
T  1138590 ttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgagaaaatcataatgaatttagttaagaa 1138688  T
Q  132 ccatgcgaaaagcatctaaggaa 154  Q
    |||| ||||||||| ||| ||||    
T  1138689 ccatacgaaaagcagctatggaa 1138711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 21261974 - 21262095
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||    
T  21261974 ttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattgtggatttgaggaaatcatgatgaatttagttaagaa 21262072  T
Q  132 ccatgcgaaaagcatctaaggaa 154  Q
    |||| | ||||||  ||||||||    
T  21262073 ccatacaaaaagctgctaaggaa 21262095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 12807928 - 12808051
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| ||||||||||| |||| |||| |||||||||||||| |||| ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  12807928 aatttcttaggtgtttttcgtatggtttttaactaaaaatacatatt-ttttagatataacaaactttgaaaaaattatggatttaaggaaatcatggtg 12808026  T
Q  118 aatttagttaagaaccatgcgaaaa 142  Q
    |||||||| ||||| ||| ||||||    
T  12808027 aatttagtcaagaatcatacgaaaa 12808051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 13754445 - 13754322
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| ||||||||||| ||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||| |||| | ||||| ||||||    
T  13754445 aattacttaggtgtttttcgtatggttcttaactaaaaatacatatttttttg-atatagcaaactttgagaaaattatgaatttgaggaaattatggtg 13754347  T
Q  118 aatttagttaagaaccatgcgaaaa 142  Q
    |||||||||||||| ||| ||||||    
T  13754346 aatttagttaagaatcatacgaaaa 13754322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 43539124 - 43539259
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| | ||||||||| |||||| || || ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||| | ||    
T  43539124 aatttcttaggtatttttcgtatggttctgaactataaatacatatt-ttttggatataacaaactttgagaaaattatggatttaagaaaatcacgatg 43539222  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||| ||||| |||||| || ||||||||    
T  43539223 aatttagttaaggaccatacgaaaaacacctaaggaa 43539259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 21259884 - 21259758
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| |  ||||| || ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||  ||| | ||||||||||||    
T  21259884 aattccttaggtacttttcttatggttcttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatgattttgaggaaatcatggtg 21259786  T
Q  118 aatttagttaagaaccatgcgaaaagca 145  Q
    ||||||  |||||||||| |||||||||    
T  21259785 aatttaactaagaaccatacgaaaagca 21259758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 12744849 - 12744978
Alignment:
Q  24 ttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaattta 123  Q
    |||| ||||||| ||| |||| |||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||    
T  12744849 ttaggtgttttttgtatggtttttaactaaaaatacatatt-ttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaattta 12744947  T
Q  124 gttaagaaccatgcgaaaagcatctaaggaa 154  Q
    || || || ||| |||||| || ||||||||    
T  12744948 gtcaaaaatcatacgaaaaacacctaaggaa 12744978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 1164950 - 1164845
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||||||| |||||||||||||||||| ||||| |||||||||||| ||||||| | ||||||||||||||||| ||||||||||     
T  1164950 aattccttagctgcttttcgtatggttcttaattaaaaataaatatttttttggatataataaacttttaaaaaattatggatttaaaaaaatcatggta 1164851  T
Q  118 aattta 123  Q
    ||||||    
T  1164850 aattta 1164845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 154
Target Start/End: Complemental strand, 32623322 - 32623234
Alignment:
Q  66 ttttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| || ||||||||    
T  32623322 ttttagatataacaaactttgagaaaattatggatttacagaaatcatagtgaatttagttaagaaccatacgaaaaacacctaaggaa 32623234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 19976292 - 19976414
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| ||||||||| |||| |||||||||| | |||||||||||||||||||||||| | ||||||||||| |||||| | || ||    
T  19976292 ttttcgtatggttcttaactaaaaatacgtatttttttggatatgataaactttgagaaaattatggatttgaggaaatcatggtaaatttaatcaataa 19976391  T
Q  132 ccatgcgaaaagcatctaaggaa 154  Q
    | || ||||||||| ||||||||    
T  19976392 ctatacgaaaagcacctaaggaa 19976414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 37655291 - 37655192
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||| ||| ||||||||| |||||||||||||| |||  | ||||||||||||||||||||||||| |||| | ||| ||||||||||||||||||||||    
T  37655291 tttttgtatggttcttaactaaaaatacatatttttt--gttataacaaactttgagaaaattatgaatttgaggaagtcatggtgaatttagttaagaa 37655194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 8364784 - 8364668
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || |||| ||| ||||||||| |||||||| | ||| |||| || |||||||||||||||| ||||||  ||||||  |||||||||||    
T  8364784 aattccttaggtgctttttgtatggttcttaactaaaaatata-atttttttagacataacaaactttgagagaattataaatttaagaaaatcatggtg 8364686  T
Q  118 aatttagttaagaaccat 135  Q
    ||||||||||||||||||    
T  8364685 aatttagttaagaaccat 8364668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 37552448 - 37552348
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||| ||| ||||||| | |||||||||||||| |||||  ||||||||||||||||||||||||| |||| | ||| ||||||||||||||||||||||    
T  37552448 tttttgtatggttcttgactaaaaatacatatttttttgt-tataacaaactttgagaaaattatgaatttgaggaagtcatggtgaatttagttaagaa 37552350  T
Q  132 cc 133  Q
    ||    
T  37552349 cc 37552348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 1456163 - 1456060
Alignment:
Q  31 tttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaaga 130  Q
    |||| |||| ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||| |  |||| |  ||||||||||||| ||    
T  1456163 ttttccgtatggttcttgactaaaaatacatatt-ttttggatataacaaactttgagaaaattatggatttgagaaaattacagtgaatttagttatga 1456065  T
Q  131 accat 135  Q
    |||||    
T  1456064 accat 1456060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 154
Target Start/End: Complemental strand, 780895 - 780813
Alignment:
Q  72 atataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||| | ||||  ||| ||||||| ||||||||||    
T  780895 atataacaaactttaagaaaattatggatttaaggaaatcatggtgaatttaatcaagagtcatacgaaaagaatctaaggaa 780813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 5144459 - 5144553
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaa 128  Q
    |||| ||||| || |||| |||||||||| |||  ||||||||||| || ||| |||||||||||| |||||||||||||||| |||||||||||||    
T  5144459 tttttgtacgttttttaactaaaaatacacatt--tttggatataataaccttagagaaaattatgaatttaaagaaatcatgatgaatttagttaa 5144553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 18236483 - 18236608
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaataca-tattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggt 116  Q
    |||| ||||| || ||||| || | ||||||  |||||||||| | || |||||||||||||||||||||| ||||||||| ||||||  |||||| |      
T  18236483 aatttcttagctgcttttcctatgattcttagctaaaaatacaatttttttttggatataacaaactttgaaaaaattatgtatttaagaaaatcacgac 18236582  T
Q  117 gaatttagttaagaaccatgcgaaaa 142  Q
    ||||||||||||||||||| ||||||    
T  18236583 gaatttagttaagaaccatacgaaaa 18236608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 35806952 - 35807084
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    ||||| |||| || ||||| || ||||||||| ||||||||||| || ||||| |||||||||||||| | |||||||  ||||| |  |||||||||||    
T  35806952 aattctttaggtgcttttcatatggttcttaactaaaaatacatctt-ttttgaatataacaaactttaaaaaaattaaagatttgagaaaatcatggtg 35807050  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaag 151  Q
    ||||||| | |||||||| | |||| ||||||||    
T  35807051 aatttaggttagaaccatacaaaaatcatctaag 35807084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 2529066 - 2529130
Alignment:
Q  87 agaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||  ||||||||| |||||    
T  2529066 agaaaattatggatttaaggaaatcacggtgaatttagttaagaaccacacgaaaagcacctaag 2529130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 35276441 - 35276338
Alignment:
Q  24 ttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaattta 123  Q
    ||||||| |||| |||  |||||||  |||||||||| ||| |||| ||||||| ||||||| |||||||||||||||| |  |||||||||| ||||||    
T  35276441 ttagatgctttttgtatagttcttacctaaaaatacacatttttttagatataataaactttaagaaaattatggatttgataaaatcatggtaaattta 35276342  T
Q  124 gtta 127  Q
    ||||    
T  35276341 gtta 35276338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 735318 - 735385
Alignment:
Q  43 ttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatc 111  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||||||||||| |||| | ||||||    
T  735318 ttcttaattaaaaatacatatt-tcttgaatataacaaactttgagaaaattatgaatttgatgaaatc 735385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 21591300 - 21591232
Alignment:
Q  86 gagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||||| | ||||||||||||||||||||| | |||||| |||||||||  |||||||    
T  21591300 gagaaaattatggatttgaggaaatcatggtgaatttagttcacaaccatacgaaaagcacttaaggaa 21591232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 21595417 - 21595349
Alignment:
Q  86 gagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||||| | ||||||||||||||||||||| | |||||| |||||||||  |||||||    
T  21595417 gagaaaattatggatttgaggaaatcatggtgaatttagttcacaaccatacgaaaagcacttaaggaa 21595349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 12191422 - 12191492
Alignment:
Q  31 tttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggattt 102  Q
    ||||| ||| ||||||||| ||||| |||||||| |||||||||||||||||||| |||||| ||| |||||    
T  12191422 ttttttgtatggttcttaaataaaattacatatt-ttttggatataacaaactttaagaaaactatagattt 12191492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 30808032 - 30808105
Alignment:
Q  43 ttcttaattaaaaatacatattattttggatataacaaa-ctttgagaaaattatggatttaaagaaatcatgg 115  Q
    ||||||||| |||||||||||| || |||||||||||||  ||| | |||||||||||||| || |||||||||    
T  30808032 ttcttaattcaaaatacatatttttatggatataacaaagttttaaaaaaattatggatttgaaaaaatcatgg 30808105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 42522968 - 42522900
Alignment:
Q  24 ttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaat 93  Q
    |||| ||||||| ||  ||||||||| ||||||||||| |||||| | ||||||||||||||||||||||    
T  42522968 ttaggtgttttttgtttggttcttaactaaaaatacatcttatttag-atataacaaactttgagaaaat 42522900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 2268668 - 2268713
Alignment:
Q  47 taattaaaaatacatattattttggatataacaaactttgagaaaat 93  Q
    |||||||||||||||||| ||||| ||||||||||||||||| ||||    
T  2268668 taattaaaaatacatatt-ttttgaatataacaaactttgaggaaat 2268713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 15855896 - 15855862
Alignment:
Q  120 tttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||| ||||||||||||||||||    
T  15855896 tttagttaagaaccatacgaaaagcatctaaggaa 15855862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 16473008 - 16472974
Alignment:
Q  120 tttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||| ||||||||||||||||||    
T  16473008 tttagttaagaaccatacgaaaagcatctaaggaa 16472974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 28056179 - 28056225
Alignment:
Q  89 aaaattatggatttaaagaaatcatggtgaatttagttaagaaccat 135  Q
    ||||||||||||||||  |||||||| | ||||||||||||||||||    
T  28056179 aaaattatggatttaagaaaatcatgataaatttagttaagaaccat 28056225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 34513515 - 34513477
Alignment:
Q  76 aacaaactttgagaaaattatggatttaaagaaatcatg 114  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  34513515 aacaaactttgagaaaattatgggtttgaagaaatcatg 34513477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 35420730 - 35420764
Alignment:
Q  120 tttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||| ||||||||||||||||||    
T  35420730 tttagttaagaaccatacgaaaagcatctaaggaa 35420764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 2268709 - 2268754
Alignment:
Q  106 gaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaag 151  Q
    |||||||  ||||||||||||||||||||| | |||||||||||||    
T  2268709 gaaatcacagtgaatttagttaagaaccatacaaaaagcatctaag 2268754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 2538467 - 2538507
Alignment:
Q  73 tataacaaactttgagaaaattatggatttaaagaaatcat 113  Q
    ||||||||||| |||||||||||||||||| || |||||||    
T  2538467 tataacaaactctgagaaaattatggatttgaaaaaatcat 2538507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 15855997 - 15855957
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaata 58  Q
    ||||||||||||| |||||||| ||||||||| ||||||||    
T  15855997 aattccttagatgcttttcgtatggttcttaactaaaaata 15855957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 16473109 - 16473069
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaata 58  Q
    ||||||||||||| |||||||| ||||||||| ||||||||    
T  16473109 aattccttagatgcttttcgtatggttcttaactaaaaata 16473069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 35420629 - 35420669
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaata 58  Q
    ||||||||||||| |||||||| ||||||||| ||||||||    
T  35420629 aattccttagatgcttttcgtatggttcttaactaaaaata 35420669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 51080 - 51215
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| |  |||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||    
T  51080 aattccttaggtccttttcgtatggttcttaactaaaaatatatatt-ttttggatataacaaactttgagaaaattatgaatttaaggaaatcatagtg 51178  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||||||  |||||| | ||||||||    
T  51179 aatttagttaagaaccatatgaaaagtacctaaggaa 51215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 2094 - 1962
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| || ||||  || ||||||||| ||||||||| |||| |||| |||||||||||||||| ||||||||||||||| | ||||||||||||    
T  2094 aattccttaggtgctttttatatggttcttaactaaaaatacgtatttttttagatataacaaactttgtgaaaattatggatttgaggaaatcatggtg 1995  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaa 150  Q
    |||||||||||||||||| | ||||||| ||||    
T  1994 aatttagttaagaaccatacaaaaagcacctaa 1962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 145
Target Start/End: Complemental strand, 3533 - 3421
Alignment:
Q  32 ttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaa 131  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||  |||| | |||||||||||||||||| |||||||    
T  3533 ttttcgtatggttcttaaataaaaatacatatt-ttttggatataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaagaa 3435  T
Q  132 ccatgcgaaaagca 145  Q
    |||| | |||||||    
T  3434 ccatacaaaaagca 3421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 10133 - 10258
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||||||||| |||||| |||| ||||||||| |||||||| |||||  |||||||||||||||||||||||||||||||||| | |  |||||||||||    
T  10133 aattccttaggtgttttgcgtatggttcttaactaaaaatatatatt--tttggatataacaaactttgagaaaattatggatgtgagaaaatcatggtg 10230  T
Q  118 aatttagttaagaaccatgcgaaaagca 145  Q
    |||||| |||||||  || |||||||||    
T  10231 aatttacttaagaattatacgaaaagca 10258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 14459 - 14594
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatggatttaaagaaatcatggtg 117  Q
    |||| ||||| |||||||| || ||| ||||| |||||||||||||||||| |||||||||| |||||||||||||||||||| | | ||| | ||||||    
T  14459 aatttcttaggtgtttttcctatggtacttaactaaaaatacatattattt-ggatataacagactttgagaaaattatggatatgacgaagtaatggtg 14557  T
Q  118 aatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    ||||||||||||||| || ||||||||| | ||||||    
T  14558 aatttagttaagaacgatacgaaaagcacccaaggaa 14594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 5718 - 5857
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaa-at---tatggatttaaagaaatcat 113  Q
    ||||| |||| || |||||||| ||||||||| |||||||||||||| |||||||||||||||| |||   ||  ||   ||||||||| | ||||||||    
T  5718 aattctttaggtgcttttcgtatggttcttaactaaaaatacatatt-ttttggatataacaaattttctaaattatggatatggatttgaggaaatcat 5816  T
Q  114 ggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  5817 ggtgaatttagttaagaaccatacgaaaagcacctaaggaa 5857  T

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Target: scaffold0013 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 94238 - 94305
Alignment:
Q  68 ttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccat 135  Q
    |||||||||||||||| |||||||||| ||||||| |  |||||||||||||||||||||||||||||    
T  94238 ttggatataacaaactatgagaaaattttggatttgataaaatcatggtgaatttagttaagaaccat 94305  T

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Target: scaffold0018 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 154
Target Start/End: Complemental strand, 138384 - 138296
Alignment:
Q  66 ttttggatataacaaactttgagaaaattatggatttaaagaaatcatggtgaatttagttaagaaccatgcgaaaagcatctaaggaa 154  Q
    |||||||||||| ||||||| | |||| |||||||||||  |||||||| |||||||||||||||| ||| ||||||||  ||||||||    
T  138384 ttttggatataataaactttaaaaaaaatatggatttaagaaaatcatgatgaatttagttaagaatcatacgaaaagctcctaaggaa 138296  T

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Target: scaffold0006 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 72425 - 72346
Alignment:
Q  18 aattccttagatgtttttcgtacggttcttaattaaaaatacatattattttggatataacaaactttgagaaaattatgg 98  Q
    |||||||||  || |||||||| |||| |||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  72425 aattccttaagtgcttttcgtatggtttttaactaaaaatacatatt-ttttggatataacaaactctgagaaaattatgg 72346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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