View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15114_high_7 (Length: 262)

Name: NF15114_high_7
Description: NF15114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15114_high_7
NF15114_high_7
[»] chr3 (21 HSPs)
chr3 (12-254)||(12033395-12033636)
chr3 (12-252)||(14865711-14865951)
chr3 (12-254)||(17131595-17131837)
chr3 (12-240)||(19235020-19235245)
chr3 (12-117)||(23370455-23370560)
chr3 (57-194)||(13302235-13302372)
chr3 (56-134)||(51301572-51301650)
chr3 (57-194)||(13323782-13323920)
chr3 (57-194)||(13312891-13313028)
chr3 (52-121)||(10389433-10389502)
chr3 (52-121)||(10414522-10414591)
chr3 (52-121)||(10421192-10421261)
chr3 (63-201)||(17240513-17240652)
chr3 (57-114)||(24933823-24933880)
chr3 (63-117)||(9534328-9534382)
chr3 (63-117)||(18929246-18929300)
chr3 (65-117)||(20247791-20247843)
chr3 (65-117)||(24192957-24193009)
chr3 (62-114)||(41455097-41455149)
chr3 (62-117)||(16801467-16801521)
chr3 (63-117)||(14762758-14762812)
[»] scaffold0053 (1 HSPs)
scaffold0053 (12-252)||(79439-79680)
[»] chr1 (10 HSPs)
chr1 (12-253)||(20851082-20851323)
chr1 (12-253)||(20857709-20857950)
chr1 (12-253)||(21706140-21706381)
chr1 (12-254)||(21710682-21710923)
chr1 (21-115)||(20044910-20045004)
chr1 (63-136)||(18712780-18712854)
chr1 (63-117)||(20437024-20437078)
chr1 (63-117)||(32651573-32651627)
chr1 (62-114)||(41112038-41112090)
chr1 (63-117)||(19663517-19663571)
[»] chr8 (8 HSPs)
chr8 (12-253)||(24320620-24320861)
chr8 (63-240)||(29643386-29643564)
chr8 (57-117)||(44477623-44477683)
chr8 (57-117)||(44492781-44492841)
chr8 (63-148)||(18614240-18614327)
chr8 (63-201)||(23482053-23482192)
chr8 (65-117)||(8727735-8727787)
chr8 (62-114)||(23866618-23866670)
[»] chr7 (26 HSPs)
chr7 (12-254)||(20906411-20906652)
chr7 (12-252)||(16090940-16091181)
chr7 (12-252)||(29181058-29181299)
chr7 (12-162)||(2971209-2971359)
chr7 (156-254)||(2966828-2966926)
chr7 (52-234)||(2465246-2465426)
chr7 (12-121)||(14319579-14319688)
chr7 (54-234)||(3857357-3857536)
chr7 (12-121)||(14230777-14230886)
chr7 (52-115)||(31155396-31155459)
chr7 (12-117)||(14567204-14567309)
chr7 (63-117)||(11382871-11382925)
chr7 (63-117)||(11389348-11389402)
chr7 (55-117)||(21230952-21231014)
chr7 (62-117)||(14422985-14423040)
chr7 (63-117)||(16009577-16009631)
chr7 (62-114)||(12590643-12590695)
chr7 (62-114)||(13007435-13007487)
chr7 (61-117)||(20311050-20311106)
chr7 (63-117)||(13679494-13679548)
chr7 (63-117)||(15168176-15168230)
chr7 (62-114)||(12709843-12709895)
chr7 (62-114)||(13122914-13122966)
chr7 (62-114)||(13743712-13743764)
chr7 (65-117)||(16677296-16677348)
chr7 (65-117)||(17651532-17651584)
[»] chr2 (13 HSPs)
chr2 (13-254)||(25180880-25181121)
chr2 (15-253)||(10441-10679)
chr2 (12-121)||(27207669-27207778)
chr2 (12-121)||(26885179-26885287)
chr2 (12-240)||(23168249-23168480)
chr2 (12-240)||(23579506-23579737)
chr2 (63-201)||(23265058-23265197)
chr2 (63-201)||(23280126-23280265)
chr2 (63-117)||(6483718-6483772)
chr2 (63-117)||(6487185-6487239)
chr2 (63-117)||(21908360-21908414)
chr2 (62-114)||(26583830-26583882)
chr2 (56-114)||(5706017-5706075)
[»] chr5 (21 HSPs)
chr5 (12-253)||(19236765-19237005)
chr5 (12-253)||(22461020-22461261)
chr5 (12-253)||(22467644-22467885)
chr5 (12-234)||(20772854-20773072)
chr5 (12-234)||(20781629-20781847)
chr5 (12-240)||(24929880-24930105)
chr5 (12-240)||(28895992-28896218)
chr5 (12-240)||(28924818-28925044)
chr5 (12-240)||(28909240-28909466)
chr5 (12-240)||(28945635-28945861)
chr5 (54-231)||(20820105-20820279)
chr5 (54-231)||(20827205-20827379)
chr5 (12-240)||(28889288-28889514)
chr5 (55-240)||(34829962-34830146)
chr5 (63-201)||(18407944-18408083)
chr5 (63-201)||(23111200-23111339)
chr5 (61-117)||(22438746-22438802)
chr5 (12-117)||(38144487-38144591)
chr5 (63-117)||(19512387-19512441)
chr5 (63-117)||(28370055-28370109)
chr5 (62-114)||(23528634-23528686)
[»] chr4 (7 HSPs)
chr4 (24-252)||(16146791-16147020)
chr4 (55-240)||(27906142-27906328)
chr4 (65-176)||(14486601-14486713)
chr4 (61-117)||(15408140-15408196)
chr4 (56-114)||(53483708-53483766)
chr4 (62-117)||(11848114-11848169)
chr4 (62-114)||(8045832-8045884)
[»] scaffold0072 (1 HSPs)
scaffold0072 (12-252)||(49919-50161)
[»] chr6 (24 HSPs)
chr6 (12-253)||(20007897-20008138)
chr6 (12-240)||(9099023-9099248)
chr6 (12-234)||(21364433-21364650)
chr6 (12-234)||(23968415-23968632)
chr6 (12-115)||(11288620-11288721)
chr6 (12-240)||(31252300-31252529)
chr6 (52-115)||(15458492-15458555)
chr6 (52-115)||(15465087-15465150)
chr6 (55-117)||(10986173-10986235)
chr6 (56-117)||(34639980-34640041)
chr6 (56-117)||(34646654-34646715)
chr6 (62-117)||(29614146-29614201)
chr6 (63-117)||(4477858-4477912)
chr6 (63-117)||(23839199-23839253)
chr6 (55-117)||(24512836-24512898)
chr6 (62-114)||(12168366-12168418)
chr6 (62-114)||(19287275-19287327)
chr6 (62-114)||(19785869-19785921)
chr6 (62-114)||(19878459-19878511)
chr6 (62-117)||(930095-930150)
chr6 (62-117)||(18800438-18800493)
chr6 (12-90)||(28288461-28288537)
chr6 (63-115)||(9187498-9187550)
chr6 (62-114)||(19884235-19884287)
[»] scaffold0023 (1 HSPs)
scaffold0023 (12-252)||(135304-135543)
[»] scaffold1318 (1 HSPs)
scaffold1318 (12-201)||(1862-2051)
[»] scaffold0348 (1 HSPs)
scaffold0348 (57-252)||(9201-9396)
[»] scaffold0131 (1 HSPs)
scaffold0131 (12-227)||(889-1101)
[»] scaffold1469 (1 HSPs)
scaffold1469 (52-240)||(1234-1420)
[»] scaffold0384 (1 HSPs)
scaffold0384 (21-233)||(16023-16233)
[»] scaffold0127 (1 HSPs)
scaffold0127 (12-201)||(10156-10344)
[»] scaffold0029 (3 HSPs)
scaffold0029 (52-234)||(91192-91374)
scaffold0029 (52-234)||(96918-97100)
scaffold0029 (62-115)||(111885-111938)
[»] scaffold0001 (1 HSPs)
scaffold0001 (12-196)||(492978-493162)
[»] scaffold0553 (2 HSPs)
scaffold0553 (12-117)||(10145-10250)
scaffold0553 (21-90)||(11042-11111)
[»] scaffold0544 (1 HSPs)
scaffold0544 (12-117)||(1475-1580)
[»] scaffold0609 (1 HSPs)
scaffold0609 (52-240)||(5847-6035)
[»] scaffold0720 (1 HSPs)
scaffold0720 (12-121)||(3352-3461)
[»] scaffold0261 (1 HSPs)
scaffold0261 (55-240)||(23562-23748)
[»] scaffold0183 (1 HSPs)
scaffold0183 (12-115)||(6-107)
[»] scaffold0249 (1 HSPs)
scaffold0249 (52-115)||(13884-13947)
[»] scaffold0034 (1 HSPs)
scaffold0034 (55-240)||(73161-73347)
[»] scaffold0107 (1 HSPs)
scaffold0107 (55-240)||(40524-40711)
[»] scaffold0453 (1 HSPs)
scaffold0453 (58-121)||(10546-10609)
[»] scaffold0222 (1 HSPs)
scaffold0222 (63-201)||(16736-16875)
[»] scaffold0019 (1 HSPs)
scaffold0019 (61-240)||(135349-135530)
[»] scaffold2054 (1 HSPs)
scaffold2054 (62-115)||(717-770)
[»] scaffold0099 (1 HSPs)
scaffold0099 (64-240)||(12833-13019)
[»] scaffold0026 (2 HSPs)
scaffold0026 (56-117)||(111686-111747)
scaffold0026 (62-117)||(11850-11905)
[»] scaffold0146 (1 HSPs)
scaffold0146 (63-201)||(13548-13687)
[»] scaffold0004 (1 HSPs)
scaffold0004 (63-136)||(116877-116951)
[»] scaffold0924 (1 HSPs)
scaffold0924 (62-117)||(750-805)
[»] scaffold0461 (1 HSPs)
scaffold0461 (63-201)||(8-147)
[»] scaffold0247 (1 HSPs)
scaffold0247 (62-117)||(11342-11397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (62-117)||(30858-30913)
[»] scaffold0020 (1 HSPs)
scaffold0020 (63-136)||(101928-102002)
[»] scaffold0235 (1 HSPs)
scaffold0235 (55-116)||(22585-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (61-117)||(17644-17700)
[»] scaffold0025 (1 HSPs)
scaffold0025 (65-117)||(14398-14450)
[»] scaffold0456 (2 HSPs)
scaffold0456 (62-117)||(932-987)
scaffold0456 (62-117)||(8077-8132)
[»] scaffold0090 (1 HSPs)
scaffold0090 (62-117)||(18170-18225)
[»] scaffold1461 (1 HSPs)
scaffold1461 (63-121)||(1485-1543)
[»] scaffold0317 (1 HSPs)
scaffold0317 (63-117)||(1387-1441)
[»] scaffold0129 (1 HSPs)
scaffold0129 (56-114)||(45268-45326)
[»] scaffold0124 (1 HSPs)
scaffold0124 (63-117)||(34276-34330)
[»] scaffold1773 (1 HSPs)
scaffold1773 (53-114)||(1181-1242)
[»] scaffold0796 (2 HSPs)
scaffold0796 (21-114)||(1691-1784)
scaffold0796 (21-114)||(5714-5807)
[»] scaffold0117 (2 HSPs)
scaffold0117 (62-115)||(1897-1950)
scaffold0117 (62-115)||(8574-8627)
[»] scaffold0058 (1 HSPs)
scaffold0058 (62-114)||(294-346)
[»] scaffold0006 (1 HSPs)
scaffold0006 (62-114)||(50182-50234)


Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 12 - 254
Target Start/End: Original strand, 12033395 - 12033636
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||||||||||||||| ||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12033395 agagagaagaacttaggaactgatttgatgtgctt-ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 12033493  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12033494 aaaattaatcaattgaactgttcttaaggtaaaattgggaaattaagggttaatgatgattttgaaagaaaaggtataagaatcaggtttataatgttgt 12033593  T
Q  212 actttgatgattagtatgatttcttaatccatgttgatgatgt 254  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||    
T  12033594 actttgatgtttagtatgatttcttaatctatgttgttgatgt 12033636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 14865951 - 14865711
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14865951 agagagaagaacttaggaactgatttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctg 14865852  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||| |||||||||    
T  14865851 aaaattaatcaattaaactgttcttaaggtaaaattgggaaaataatggttaatgatgattttgaaagaaaaggtgtaagaagcaggtttataatgttgt 14865752  T
Q  212 actttgatgattagtatgatttcttaatccatgttgatgat 252  Q
    |||| ||||||||||||||||||||||||||||||| ||||    
T  14865751 acttggatgattagtatgatttcttaatccatgttgttgat 14865711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 12 - 254
Target Start/End: Complemental strand, 17131837 - 17131595
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17131837 agagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 17131738  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||| |||||||||    
T  17131737 aaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttataatgttgt 17131638  T
Q  212 actttgatgattagtatgatttcttaatccatgttgatgatgt 254  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||    
T  17131637 actttgatgtttagtatgatttcttaatctatgttgttgatgt 17131595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 19235020 - 19235245
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||| |||||||| ||||||||||  ||  ||  |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  19235020 agagagaagagcttaggaattgatttgctgcact--ttatctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctg 19235117  T
Q  112 -aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
     |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| || ||||||| || |||||||||||||| ||||||||    
T  19235118 aaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattctg-aagaaaatgtgtaagaatcaggtttataatgttg 19235216  T
Q  211 tactttgatgattagtatgatttcttaatc 240  Q
    || ||||||||||||||||||||| |||||    
T  19235217 ta-tttgatgattagtatgatttcctaatc 19235245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 23370455 - 23370560
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||||||||||| |||||||||||||  ||| || | |||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||    
T  23370455 agagagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctg 23370554  T
Q  112 aaaatt 117  Q
    ||||||    
T  23370555 aaaatt 23370560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 194
Target Start/End: Original strand, 13302235 - 13302372
Alignment:
Q  57 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaat 155  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| || | ||||||| ||| ||||| |||| || |    
T  13302235 caattctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaaatgcattgttcttgaagataaaa-tggggaatt 13302333  T
Q  156 aagggttaatgatgattttgaaagaaaaggtataagaat 194  Q
     |||||| ||||||| || ||||| || ||| |||||||    
T  13302334 tagggttgatgatgacttcgaaaggaatggtgtaagaat 13302372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 51301650 - 51301572
Alignment:
Q  56 gcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttc 134  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||    
T  51301650 gcaattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaattaatcaattgaattgttc 51301572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 194
Target Start/End: Original strand, 13323782 - 13323920
Alignment:
Q  57 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaa 154  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||||  | ||||||| ||| |||||||||| ||     
T  13323782 caattctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaaattagattgttcttgaagataaaattggg-aat 13323880  T
Q  155 taagggttaatgatgattttgaaagaaaaggtataagaat 194  Q
    | |||||| ||||||| || ||||| || ||| |||||||    
T  13323881 ttagggttgatgatgacttcgaaaggaatggtgtaagaat 13323920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 194
Target Start/End: Original strand, 13312891 - 13313028
Alignment:
Q  57 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaat 155  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| |||||| |||||||||||||| || | ||||||| ||| |||||| ||| || |    
T  13312891 caattctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaattaatcaaatggattgttcttgaagataaaataggg-aatt 13312989  T
Q  156 aagggttaatgatgattttgaaagaaaaggtataagaat 194  Q
     |||||| ||||||| || ||||| || ||| |||||||    
T  13312990 tagggttgatgatgacttcgaaaggaatggtgtaagaat 13313028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 10389433 - 10389502
Alignment:
Q  52 ctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 121  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||| |||||    
T  10389433 ctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10389502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 10414522 - 10414591
Alignment:
Q  52 ctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 121  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||| |||||    
T  10414522 ctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10414591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 10421192 - 10421261
Alignment:
Q  52 ctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 121  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||| |||||    
T  10421192 ctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10421261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 17240513 - 17240652
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 159  Q
    ||||||||||||| || ||||| |||||| || ||||| |||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 17240610  T
Q  160 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 201  Q
    ||| ||| |||||||||||| || ||| ||||||||| ||||    
T  17240611 gttgatgctgattttgaaaggaatggtgtaagaatcatgttt 17240652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 24933823 - 24933880
Alignment:
Q  57 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  24933823 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 24933880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 9534382 - 9534328
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 9534328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 18929300 - 18929246
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| |||||| |||| ||||||||||||||||||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaatt 18929246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 20247791 - 20247843
Alignment:
Q  65 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 20247843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 24193009 - 24192957
Alignment:
Q  65 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 24192957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 41455097 - 41455149
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  41455097 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 41455149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 16801467 - 16801521
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||| || ||||| |||||| |||| ||||||||||||||||||||    
T  16801467 ctaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaatt 16801521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 14762758 - 14762812
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 14762812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 79439 - 79680
Alignment:
Q  12 agagagaagaacttaggaactgattt-gctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttct 110  Q
    |||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  79439 agagagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttct 79538  T
Q  111 gaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  79539 gaaaattaatcaattaaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttataatgttg 79638  T
Q  211 tactttgatgattagtatgatttcttaatccatgttgatgat 252  Q
    || ||  |||||||||||||||||||||||||||||| ||||    
T  79639 tatttgaatgattagtatgatttcttaatccatgttgttgat 79680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 20851082 - 20851323
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20851082 agagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 20851181  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||| || ||||||    
T  20851182 aaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttgt 20851281  T
Q  212 actttgatgattagtatgatttcttaatccatgttgatgatg 253  Q
    ||||||||| ||||||||||||||||||| |||||| |||||    
T  20851282 actttgatgtttagtatgatttcttaatctatgttgttgatg 20851323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 20857709 - 20857950
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20857709 agagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 20857808  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||| || ||||||    
T  20857809 aaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttgt 20857908  T
Q  212 actttgatgattagtatgatttcttaatccatgttgatgatg 253  Q
    ||||||||| |||||||| |||||||||| |||||| |||||    
T  20857909 actttgatgtttagtatgttttcttaatctatgttgttgatg 20857950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 21706381 - 21706140
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21706381 agagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 21706282  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||| || ||||||    
T  21706281 aaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttgt 21706182  T
Q  212 actttgatgattagtatgatttcttaatccatgttgatgatg 253  Q
    ||||||||| |||||||| |||||||||| |||||| |||||    
T  21706181 actttgatgtttagtatgttttcttaatctatgttgttgatg 21706140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 12 - 254
Target Start/End: Complemental strand, 21710923 - 21710682
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21710923 agagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 21710824  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||| | |||||||||||||||||| ||||||| ||||||||| ||||||| |    
T  21710823 aaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggtttaagatgattttgaaagaaaaagtataaggatcaggtttataatgttat 21710724  T
Q  212 actttgatgattagtatgatttcttaatccatgttgatgatgt 254  Q
    || |||||| ||||||||||| ||||||| |||||| ||||||    
T  21710723 ac-ttgatgtttagtatgattccttaatctatgttgttgatgt 21710682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 20044910 - 20045004
Alignment:
Q  21 aacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 115  Q
    ||||||||| ||||||||||||| |||||     | ||||||||||||||||||||||||||| ||||||  || |||||||||| |||||||||    
T  20044910 aacttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatccttcaatgatcttaatatataaattctgaaaa 20045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 18712854 - 18712780
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 136  Q
    ||||||| ||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 18712780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 20437024 - 20437078
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 20437078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 32651627 - 32651573
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 32651573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 41112090 - 41112038
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  41112090 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 41112038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 19663517 - 19663571
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| || ||| ||||| |||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaatt 19663571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 24320620 - 24320861
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24320620 agagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 24320719  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| | ||||||||| || ||||||    
T  24320720 aaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtatagggatcaggtttatattgttgt 24320819  T
Q  212 actttgatgattagtatgatttcttaatccatgttgatgatg 253  Q
    ||||||||| ||||||||||||||||||| |||||| |||||    
T  24320820 actttgatgtttagtatgatttcttaatctatgttgttgatg 24320861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 240
Target Start/End: Original strand, 29643386 - 29643564
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttc-ttaaggtaaaattgggaaaataaggg 160  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||||||| ||||| | ||| |||||||| | || ||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaaattgaattgttcatgaagataaaattgag-aattaaggg 29643484  T
Q  161 ttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 240  Q
    || |||||||||| | ||| |  ||| |||||||  ||||  |  ||||||| |||| || | |||||||||||||||||    
T  29643485 ttgatgatgatttaggaaggattggtgtaagaattgggttaattgtgttgtaatttggtgttcagtatgatttcttaatc 29643564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 44477683 - 44477623
Alignment:
Q  57 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  44477683 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 44477623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 44492841 - 44492781
Alignment:
Q  57 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  44492841 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 44492781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 18614327 - 18614240
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaat-caattgaactgttctt-aaggtaaaattg 148  Q
    ||||||||||||| || ||||| |||||| |||| |||||||||||||||||||| || |||||||| ||||||| ||| ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattg 18614240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 23482053 - 23482192
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 159  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 23482150  T
Q  160 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 201  Q
    ||| ||| ||||||||||||  | ||| ||||||||| ||||    
T  23482151 gttgatgctgattttgaaagggatggtgtaagaatcatgttt 23482192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 8727735 - 8727787
Alignment:
Q  65 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||| |||||||  |||||| ||||||| |||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaatt 8727787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 23866670 - 23866618
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  23866670 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 23866618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 12 - 254
Target Start/End: Original strand, 20906411 - 20906652
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||||||||||| ||||||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20906411 agagagaagaacttaggaacggatttgctgagctatttgtccttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 20906510  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    ||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  20906511 aaaattaatcaattgaactattcttaaggtaaaattggg-aattaagggttaatgatgattttgaaagaaaaggtataagaatcaagtttataatgttgt 20906609  T
Q  212 actttgatgattagtatgatttcttaatccatgttgatgatgt 254  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||    
T  20906610 actttgatgtttagtatgatttcttaatctatgttgttgatgt 20906652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 16091181 - 16090940
Alignment:
Q  12 agagagaagaacttaggaactgattt-gctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttct 110  Q
    |||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16091181 agagagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttct 16091082  T
Q  111 gaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  16091081 gaaagttaatcaattaaactgttcctaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttataatgttg 16090982  T
Q  211 tactttgatgattagtatgatttcttaatccatgttgatgat 252  Q
    || ||  |||||||||||||||||||||||||||||| ||||    
T  16090981 tatttgaatgattagtatgatttcttaatccatgttgttgat 16090940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 29181058 - 29181299
Alignment:
Q  12 agagagaagaacttaggaactgattt-gctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttct 110  Q
    |||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29181058 agagagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttct 29181157  T
Q  111 gaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  29181158 gaaaattaatcaattaaactattcttaaggtaaaatttggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggcttataatgttg 29181257  T
Q  211 tactttgatgattagtatgatttcttaatccatgttgatgat 252  Q
    || ||  |||||||||||||||||||||||||||||| ||||    
T  29181258 tatttgaatgattagtatgatttcttaatccatgttgttgat 29181299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 12 - 162
Target Start/End: Complemental strand, 2971359 - 2971209
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2971359 agagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatttataatttctg 2971260  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggtt 162  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2971259 aaaattaatcaattgaactgttcttaaggtaaaattgggaagataagggtt 2971209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 2966926 - 2966828
Alignment:
Q  156 aagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgatgatgt 254  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2966926 aagggttaatgatgtttttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatgt 2966828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 234
Target Start/End: Complemental strand, 2465426 - 2465246
Alignment:
Q  52 ctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattggga 151  Q
    |||||||||||||||||||||||||||| ||| ||||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| ||||||| | ||     
T  2465426 ctttgcaattctaaggtaagggtgggatcatccttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaattggg 2465327  T
Q  152 aaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttc 234  Q
    |||| ||||||||||   |||||| ||||||| || ||||| | |||||| ||||||| || ||||||||||| |||||||||    
T  2465326 aaattagggttaatggcaattttg-aagaaaatgtgtaagatttaggtttataatgttata-tttgatgattaatatgatttc 2465246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 14319579 - 14319688
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||||||||||| |||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||  |  |||| |||||||||||    
T  14319579 agagagaagaacttaggaacggatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgattttaatgtataatttctg 14319678  T
Q  112 aaaattaatc 121  Q
    ||||||||||    
T  14319679 aaaattaatc 14319688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 234
Target Start/End: Original strand, 3857357 - 3857536
Alignment:
Q  54 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt---aaaattggg 150  Q
    |||||||||||||||||||||||||| ||||| ||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| |||   |||||||||    
T  3857357 ttgcaattctaaggtaagggtgggatcatctt-caataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaattggg 3857455  T
Q  151 aaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttc 234  Q
     |||| ||||||||||   |||||| ||||||| || ||||| | |||||| |||||||||| ||||||||||| |||||||||    
T  3857456 -aaattagggttaatggcaattttg-aagaaaatgtgtaagatttaggtttataatgttgta-tttgatgattaatatgatttc 3857536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 14230886 - 14230777
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||| ||||||||||||| ||||||  |||||  ||| |||||||||||||||||||||||||||||||||||||||     |||| |||||||||||    
T  14230886 agagaggagaacttaggaacggatttgtcgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgaatttaatgtataatttctg 14230787  T
Q  112 aaaattaatc 121  Q
    ||||||||||    
T  14230786 aaaattaatc 14230777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 31155459 - 31155396
Alignment:
Q  52 ctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  31155459 ctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 31155396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 14567309 - 14567204
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||||||||||| |||||||||||||  ||| || | ||||||||||||||||||| |  || | ||||||  | |||||||||  ||||||    
T  14567309 agagagaagaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgaggctaaccttcaatgattataatatatggtttctg 14567210  T
Q  112 aaaatt 117  Q
    ||||||    
T  14567209 aaaatt 14567204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 11382871 - 11382925
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| |||||| |||||||||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaatt 11382925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 11389348 - 11389402
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| |||||| |||||||||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaatt 11389402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 21230952 - 21231014
Alignment:
Q  55 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||| ||||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  21230952 tgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 21231014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 14423040 - 14422985
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  14423040 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 14422985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 16009631 - 16009577
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 16009577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 12590643 - 12590695
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  12590643 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 12590695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 13007487 - 13007435
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  13007487 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 13007435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 20311050 - 20311106
Alignment:
Q  61 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||||| || ||||| |||||| ||||||  |||||||||||||||||    
T  20311050 tctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaatt 20311106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 13679548 - 13679494
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || |||||||||||  |||| ||||||||||| ||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaatt 13679494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 15168230 - 15168176
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 15168176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 12709843 - 12709895
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  12709843 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 12709895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 13122914 - 13122966
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  13122914 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 13122966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 13743764 - 13743712
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  13743764 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 13743712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 16677348 - 16677296
Alignment:
Q  65 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||| ||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaatt 16677296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 17651584 - 17651532
Alignment:
Q  65 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||| ||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaatt 17651532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 182; Significance: 2e-98; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 13 - 254
Target Start/End: Original strand, 25180880 - 25181121
Alignment:
Q  13 gagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctga 112  Q
    |||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25180880 gagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctga 25180979  T
Q  113 aaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgta 212  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||   ||||||||| || | |||||    
T  25180980 aaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtatattgatcaggtttatatttttgta 25181079  T
Q  213 ctttgatgattagtatgatttcttaatccatgttgatgatgt 254  Q
    |||||||| ||||||||||||||||||| |||||| ||||||    
T  25181080 ctttgatgtttagtatgatttcttaatctatgttgttgatgt 25181121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 15 - 253
Target Start/End: Complemental strand, 10679 - 10441
Alignment:
Q  15 gagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||| ||||||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10679 gagaaggacttaggaactgatttgctgtgctttttgtctttgaaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 10580  T
Q  115 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 214  Q
    |||||||||||||| |||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| | || |||||| || |||||||||    
T  10579 attaatcaattgaattgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtatagggataaggtttatattgttgtact 10480  T
Q  215 ttgatgattagtatgatttcttaatccatgttgatgatg 253  Q
    |||||| ||||||||||||||||||| |||||| |||||    
T  10479 ttgatgtttagtatgatttcttaatctatgttgttgatg 10441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 27207669 - 27207778
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||||||||||| |||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||  |  |||| |||||||||||    
T  27207669 agagagaagaacttaggaacggatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgattttaatgtataatttctg 27207768  T
Q  112 aaaattaatc 121  Q
    ||||||||||    
T  27207769 aaaattaatc 27207778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 26885287 - 26885179
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||||||||||| |||||| ||||||  ||| || ||||||||||||||||||||||||||||||||||||| || |||| |||||||||||    
T  26885287 agagagaagaacttaggaacggatttgatgtgctttttgtctctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctg 26885189  T
Q  112 aaaattaatc 121  Q
    ||||||||||    
T  26885188 aaaattaatc 26885179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 23168249 - 23168480
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||||| || | |||||||||||  |||  | |||||||||||||||||||||||||||||||||| |  ||||||| |||||||||||    
T  23168249 agagagaagaacttagggacggttttgctgtgctt-ttgtttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctg 23168347  T
Q  112 -aaaattaatc-aattgaactgttcttaaggt---aaaattgggaaaataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaa 205  Q
     |||||||||| ||| |||  ||| | ||| |   ||||||  || ||| ||||| | ||| ||||||||||||||||||| ||||| ||| ||||        
T  23168348 aaaaattaatctaatagaatagttttgaagataaaaaaatt--gagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatg 23168445  T
Q  206 tgttgtactttgatgattagtatgatttcttaatc 240  Q
    ||||||| ||||||| | |||||||||||||||||    
T  23168446 tgttgtaatttgatgttcagtatgatttcttaatc 23168480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 23579506 - 23579737
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||||| || | |||||||||||  |||  | |||||||||||||||||||||||||||||||||| |  ||||||| |||||||||||    
T  23579506 agagagaagaacttagggacggttttgctgtgctt-ttgtttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctg 23579604  T
Q  112 -aaaattaatc-aattgaactgttcttaaggt---aaaattgggaaaataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaa 205  Q
     |||||||||| ||| |||  ||| | ||| |   ||||||  || ||| ||||| | ||| ||||||||||||||||||| ||||| ||| ||||        
T  23579605 aaaaattaatctaatagaatagttttgaagataaaaaaatt--gagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatg 23579702  T
Q  206 tgttgtactttgatgattagtatgatttcttaatc 240  Q
    ||||||| ||||||| | |||||||||||||||||    
T  23579703 tgttgtaatttgatgttcagtatgatttcttaatc 23579737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 23265197 - 23265058
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataaggg 160  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| ||  ||||| |  || ||| ||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaat-tgagaattaggg 23265099  T
Q  161 ttaatgatgattttgaaagaaaaggtataagaatcaggttt 201  Q
    || ||| |||||||||||| || ||| ||||||||| ||||    
T  23265098 ttgatgctgattttgaaaggaatggtgtaagaatcatgttt 23265058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 23280265 - 23280126
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataaggg 160  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| ||  ||||| |  || ||| ||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaat-tgagaattaggg 23280167  T
Q  161 ttaatgatgattttgaaagaaaaggtataagaatcaggttt 201  Q
    || ||| |||||||||||| || ||| ||||||||| ||||    
T  23280166 ttgatgctgattttgaaaggaatggtgtaagaatcatgttt 23280126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 6483772 - 6483718
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 6483718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 6487239 - 6487185
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 6487185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 21908414 - 21908360
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| |||||| |||| ||||||||||||||||||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaatt 21908360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 26583882 - 26583830
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  26583882 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 26583830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 5706017 - 5706075
Alignment:
Q  56 gcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||||||||| || ||||| ||| || ||||||| ||||||| ||||||    
T  5706017 gcaattctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa 5706075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 178; Significance: 4e-96; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 19237005 - 19236765
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19237005 agagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 19236906  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||| || ||||||    
T  19236905 aaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttgt 19236806  T
Q  212 actttgatgattagtatgatttcttaatccatgttgatgatg 253  Q
    ||||||| | ||||||||  ||||||||| |||||| |||||    
T  19236805 actttga-gtttagtatgtgttcttaatctatgttgttgatg 19236765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 22461261 - 22461020
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||| |||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22461261 agagagaagaacttaagaactgatttgctgtgccttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 22461162  T
Q  112 -aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
     |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||| ||||||||| || ||| |    
T  22461161 aaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatga-tttgaaagaaaaggtataaggatcaggtttatattgtcg 22461063  T
Q  211 tactttgatgattagtatgatttcttaatccatgttgatgatg 253  Q
    |||||||||| |||||||| ||||||| || |||||| |||||    
T  22461062 tactttgatgtttagtatgttttcttattctatgttgttgatg 22461020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 22467885 - 22467644
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||| |||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22467885 agagagaagaacttaagaactgatttgctgtgccttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 22467786  T
Q  112 -aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
     |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||| ||||||||| || ||| |    
T  22467785 aaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatga-tttgaaagaaaaggtataaggatcaggtttatattgtcg 22467687  T
Q  211 tactttgatgattagtatgatttcttaatccatgttgatgatg 253  Q
    |||||||||| |||||||| ||||||| || |||||| |||||    
T  22467686 tactttgatgtttagtatgttttcttattctatgttgttgatg 22467644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 12 - 234
Target Start/End: Complemental strand, 20773072 - 20772854
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||| |||||||| ||||||||||| ||  ||  |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  20773072 agagagaagagcttaggaattgatttgctgtact--ttatctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctg 20772975  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    |||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| || |||||||||||||| |||||||||    
T  20772974 aaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattttg-aagaaaatgtgtaagaatcaggtttataatgttgt 20772876  T
Q  212 actttgatgattagtatgatttc 234  Q
    | |||||||||||||||||||||    
T  20772875 a-tttgatgattagtatgatttc 20772854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 12 - 234
Target Start/End: Complemental strand, 20781847 - 20781629
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||| |||||||| ||||||||||| ||  ||  |||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||    
T  20781847 agagagaagagcttaggaattgatttgctgtact--ttatctttgcaattctaaggtaagggtgggattatctttcaataattataatatatgatttctg 20781750  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    |||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| || |||||||||||||| |||||||||    
T  20781749 aaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattttg-aagaaaatgtgtaagaatcaggtttataatgttgt 20781651  T
Q  212 actttgatgattagtatgatttc 234  Q
    | ||||||||||| |||||||||    
T  20781650 a-tttgatgattattatgatttc 20781629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 24929880 - 24930105
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||| |||||||| ||| ||||||  ||  ||  |||| |||||||||||||||||||||||||||||||||||||  |||||||| ||||||     
T  24929880 agagagaagagcttaggaattgacttgctgcact--ttatctttacaattctaaggtaagggtgggattatctttcaatagttctaatatatgatttcta 24929977  T
Q  112 aaaa-ttaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
    |||| |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| || ||| ||| || |||||||||||||| ||||||||    
T  24929978 aaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattctg-aaggaaatgtgtaagaatcaggtttataatgttg 24930076  T
Q  211 tactttgatgattagtatgatttcttaatc 240  Q
    || ||||||||||||||||||||| |||||    
T  24930077 ta-tttgatgattagtatgatttcctaatc 24930105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 28895992 - 28896218
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||| |||||| ||||||||||||||  ||||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||    
T  28895992 agagagaagaacctaggaattgatttgctgtgctt-ttgccgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctg 28896090  T
Q  112 aaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
    |||||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |  ||| | |||||||| | | ||||    
T  28896091 aaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatgcgtaaaattcaggtttatgacgttg 28896189  T
Q  211 tactttgatgattagtatgatttcttaatc 240  Q
    || ||| ||||||||||||||||| |||||    
T  28896190 ta-tttaatgattagtatgatttcctaatc 28896218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 28924818 - 28925044
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||| |||||| ||||||||||||||  ||||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||    
T  28924818 agagagaagaacctaggaattgatttgctgtgctt-ttgccgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctg 28924916  T
Q  112 aaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
    |||||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |  ||| | |||||||| | | ||||    
T  28924917 aaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatgcgtaaaattcaggtttatgacgttg 28925015  T
Q  211 tactttgatgattagtatgatttcttaatc 240  Q
    || ||| ||||||||||||||||| |||||    
T  28925016 ta-tttaatgattagtatgatttcctaatc 28925044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 28909240 - 28909466
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||| |||||| ||||||||||||||  ||| | |||||||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||    
T  28909240 agagagaagaacctaggaattgatttgctgtgctt-ttgtcgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctg 28909338  T
Q  112 aaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
    |||||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |  ||| | |||||||| | | ||||    
T  28909339 aaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatgcgtaaaattcaggtttatgacgttg 28909437  T
Q  211 tactttgatgattagtatgatttcttaatc 240  Q
    || ||| ||||||||||||||||| |||||    
T  28909438 ta-tttaatgattagtatgatttcctaatc 28909466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 28945635 - 28945861
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||| |||||| ||||||||||||||  ||| | |||||||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||    
T  28945635 agagagaagaacctaggaattgatttgctgtgctt-ttgtcgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctg 28945733  T
Q  112 aaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
    |||||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |  ||| | |||||||| | | ||||    
T  28945734 aaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatgcgtaaaattcaggtttatgacgttg 28945832  T
Q  211 tactttgatgattagtatgatttcttaatc 240  Q
    || ||| ||||||||||||||||| |||||    
T  28945833 ta-tttaatgattagtatgatttcctaatc 28945861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 54 - 231
Target Start/End: Complemental strand, 20820279 - 20820105
Alignment:
Q  54 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaa 153  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||  |||||  |||| ||| ||||||||||||||||| |||||    
T  20820279 ttgcaattctaaggtaagggtgggatcatctttcaatagtgttaatatataatttctgatgattaagtaattcaaccgttcttaaggtaaaatt-ggaaa 20820181  T
Q  154 ataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgat 231  Q
    || ||||||||||||||||||| |||| || | |||||| |||||||| |||||||||| ||||||||| ||||||||    
T  20820180 attagggttaatgatgattttg-aagagaatgcataagattcaggtttataatgttgta-tttgatgatgagtatgat 20820105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 54 - 231
Target Start/End: Complemental strand, 20827379 - 20827205
Alignment:
Q  54 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaa 153  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||  |||||  |||| ||| ||||||||||||||||| |||||    
T  20827379 ttgcaattctaaggtaagggtgggatcatctttcaatagtgttaatatataatttctgatgattaagtaattcaaccgttcttaaggtaaaatt-ggaaa 20827281  T
Q  154 ataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgat 231  Q
    || ||||||||||||||||||| |||| || | |||||| |||||||| |||||||||| ||||||||| ||||||||    
T  20827280 attagggttaatgatgattttg-aagagaatgcataagattcaggtttataatgttgta-tttgatgatgagtatgat 20827205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 28889288 - 28889514
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||| |||||| ||||||||  ||||  ||||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||    
T  28889288 agagagaagaacctaggaattgatttgcattgctt-ttgccgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctg 28889386  T
Q  112 aaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
    |||||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |  ||| | |||||||| | | ||||    
T  28889387 aaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatgcgtaaaattcaggtttatgacgttg 28889485  T
Q  211 tactttgatgattagtatgatttcttaatc 240  Q
    || ||| ||||||||||||||||| |||||    
T  28889486 ta-tttaatgattagtatgatttcctaatc 28889514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 240
Target Start/End: Complemental strand, 34830146 - 34829962
Alignment:
Q  55 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaa 152  Q
    ||||||||||||||||||||||||||||||||||||| |  |||| |||||||||||||||| |||| ||| |||  |||||| ||| |||||||  ||     
T  34830146 tgcaattctaaggtaagggtgggattatctttcaataat-ttaatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaatt--gag 34830050  T
Q  153 aataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 240  Q
    ||| ||||| | ||| |||||||||||| |||| | ||||||||| ||||    ||||||| ||||||||| |||||||||||||||||    
T  34830049 aattagggtatgatgctgattttgaaag-aaagatgtaagaatcatgtttaatgtgttgtaatttgatgatcagtatgatttcttaatc 34829962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 18407944 - 18408083
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 159  Q
    ||||||||||||| || ||||| |||||| ||||||||||||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 18408041  T
Q  160 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 201  Q
    ||| ||| |||||||||||| || ||| ||||||||| ||||    
T  18408042 gttgatgctgattttgaaaggaatggtgtaagaatcatgttt 18408083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 23111200 - 23111339
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 159  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 23111297  T
Q  160 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 201  Q
    ||| ||| ||||||||||||  | ||| ||||||||| ||||    
T  23111298 gttgatgctgattttgaaagggatggtgtaagaatcatgttt 23111339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 22438746 - 22438802
Alignment:
Q  61 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  22438746 tctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaatt 22438802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 38144487 - 38144591
Alignment:
Q  12 agagagaagaacttaggaactgatt-tgctgtgctaattgcctt-tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttc 109  Q
    |||||||||||||||||||| |||| ||||||| ||||  | || |||||  |||||||||||||| || ||||| |||||| ||||||| |||||||||    
T  38144487 agagagaagaacttaggaaccgattgtgctgtg-taat--cattctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttc 38144583  T
Q  110 tgaaaatt 117  Q
    ||||||||    
T  38144584 tgaaaatt 38144591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 19512441 - 19512387
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 19512387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 28370055 - 28370109
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 28370109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 23528686 - 23528634
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  23528686 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 23528634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 178; Significance: 4e-96; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 24 - 252
Target Start/End: Original strand, 16146791 - 16147020
Alignment:
Q  24 ttaggaactgattt-gctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatca 122  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16146791 ttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatca 16146890  T
Q  123 attgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgat 222  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||  |||||    
T  16146891 attaaactgttcttaaggtaaaatttggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttataatgttgtatttgaatgat 16146990  T
Q  223 tagtatgatttcttaatccatgttgatgat 252  Q
    ||||||||||||||||||||||||| ||||    
T  16146991 tagtatgatttcttaatccatgttgttgat 16147020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 55 - 240
Target Start/End: Complemental strand, 27906328 - 27906142
Alignment:
Q  55 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaat-caattgaactgttctt-aaggtaaaattgggaa 152  Q
    |||||||||||| |||||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||| |||  |||||| ||| |||||||  ||     
T  27906328 tgcaattctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttcttgaagataaaatt--gag 27906231  T
Q  153 aataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 240  Q
    ||| ||||| | ||| ||||||||||||||||||| ||||||||| ||||    ||||||| ||||||| |  ||||||||||||||||    
T  27906230 aattagggtgtgatgttgattttgaaagaaaaggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatc 27906142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 176
Target Start/End: Complemental strand, 14486713 - 14486601
Alignment:
Q  65 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataagggtt 162  Q
    ||||||||||| || |||| ||||||  ||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||||||||||| || ||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaaattgggaatat-agggtt 14486615  T
Q  163 aatgatgattttga 176  Q
     |||||||||||||    
T  14486614 gatgatgattttga 14486601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 15408196 - 15408140
Alignment:
Q  61 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  15408196 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 15408140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 53483766 - 53483708
Alignment:
Q  56 gcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  53483766 gcaattctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 53483708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 11848169 - 11848114
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  11848169 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 11848114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 8045832 - 8045884
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| || ||| ||||||| ||||||||||||||    
T  8045832 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa 8045884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 12 - 252
Target Start/End: Original strand, 49919 - 50161
Alignment:
Q  12 agagagaagaacttaggaactgattt-gctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttct 110  Q
    |||||||||||||||||||||||||| | ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49919 agagagaagaacttaggaactgattttgttgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttct 50018  T
Q  111 gaaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgtt 209  Q
     |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  50019 aaaaattaatcaattaaactgttcttaaggtaaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttataatgtt 50118  T
Q  210 gtactttgatgattagtatgatttcttaatccatgttgatgat 252  Q
     || ||  | |||||||||||||||||||||||||||| ||||    
T  50119 atatttgaaagattagtatgatttcttaatccatgttgttgat 50161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 4e-87; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 20007897 - 20008138
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    ||||||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  20007897 agagagaagaacttaggaactcatttgctgtgctt-ttgtctttgcaattctaaggtaagggtgggatcatctttcaatagtcataatatataatttatg 20007995  T
Q  112 aaaa-ttaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
    |||| |||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||| || |||||    
T  20007996 aaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttg 20008095  T
Q  211 tactttgatgattagtatgatttcttaatccatgttgatgatg 253  Q
    |||||||||| |||||||| |||||||||| || ||| |||||    
T  20008096 tactttgatgtttagtatgttttcttaatctatattgttgatg 20008138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 9099023 - 9099248
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||| |||||||| ||||||||||  ||  ||  |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  9099023 agagagaagagcttaggaattgatttgctgcact--ttatctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctg 9099120  T
Q  112 -aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
     |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| || ||||||| || |||||||||||||| ||||||||    
T  9099121 aaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattctg-aagaaaatgtgtaagaatcaggtttataatgttg 9099219  T
Q  211 tactttgatgattagtatgatttcttaatc 240  Q
    || ||||||||||||||||||||| |||||    
T  9099220 ta-tttgatgattagtatgatttcctaatc 9099248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 21364433 - 21364650
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||| |||||| || |||||||||||  ||| ||||||||||| |||||||||||||||||||| |||| || | ||||||||| |||||||    
T  21364433 agagagaagaacctaggaattgttttgctgtgctt-ttgtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatatatgatttctg 21364531  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    |||||||| ||||| ||||||| ||| |||||||||||| |||| ||||||||||   |||||  |||||||  | ||||| | |||||| |||||||||    
T  21364532 aaaattaagcaatttaactgtt-ttatggtaaaattggg-aaattagggttaatg-gcatttttgaagaaaatatgtaagacttaggtttataatgttgt 21364628  T
Q  212 actttgatgattagtatgatttc 234  Q
    | ||||||||||| |||||||||    
T  21364629 a-tttgatgattaatatgatttc 21364650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 23968415 - 23968632
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||| |||||| || |||||||||||  ||| ||||||||||| |||||||||||||||||||| |||| || | ||||||||| |||||||    
T  23968415 agagagaagaacctaggaattgttttgctgtgctt-ttgtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatatatgatttctg 23968513  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    |||||||| ||||| ||||||| ||| |||||||||||| |||| ||||||||||   |||||  |||||||  | ||||| | |||||| |||||||||    
T  23968514 aaaattaagcaatttaactgtt-ttatggtaaaattggg-aaattagggttaatg-gcatttttgaagaaaatatgtaagacttaggtttataatgttgt 23968610  T
Q  212 actttgatgattagtatgatttc 234  Q
    | ||||||||||| |||||||||    
T  23968611 a-tttgatgattaatatgatttc 23968632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 11288620 - 11288721
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||| |||||||||||||| |||||| |  ||| ||| |||||||||||||||||||||||||||||||||||  || ||||||||||||||||    
T  11288620 agagagaagagcttaggaactgatt-gctgtgttt-ttgtcttggcaattctaaggtaagggtgggattatctttcaatgatcttaatatataatttctg 11288717  T
Q  112 aaaa 115  Q
    ||||    
T  11288718 aaaa 11288721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 31252529 - 31252300
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaa--ttgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttc 109  Q
    |||||||||||||||||||| |||| |||||| |    ||| |||||||||||||||||||||||| |||||||||| |||  | |||||||||||||||    
T  31252529 agagagaagaacttaggaaccgatt-gctgtgttttctttgtctttgcaattctaaggtaagggtgagattatcttttaatgattataatatataatttc 31252431  T
Q  110 tgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaat 206  Q
    |||||||||||| |||||||  |||||| ||| |||||||  || ||| ||||| | | | |||||||||||| |||||| ||||||| | ||||    |    
T  31252430 tgaaaattaatctaattgaatagttcttgaagataaaatt--gagaattagggtatgaggctgattttgaaag-aaaggtgtaagaattatgtttaacgt 31252334  T
Q  207 gttgtactttgatgattagtatgatttcttaatc 240  Q
    |||||| ||||||| |  ||||||||||||||||    
T  31252333 gttgtaatttgatgctatgtatgatttcttaatc 31252300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 15458555 - 15458492
Alignment:
Q  52 ctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  15458555 ctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15458492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 15465150 - 15465087
Alignment:
Q  52 ctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  15465150 ctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15465087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 10986173 - 10986235
Alignment:
Q  55 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||||||||||| || |||||||||||| ||||||| |||||||||| ||||||    
T  10986173 tgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaatt 10986235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 34639980 - 34640041
Alignment:
Q  56 gcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||||||||| || ||||| |||||| || |||| |||||||||||||||||    
T  34639980 gcaattctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaatt 34640041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 34646654 - 34646715
Alignment:
Q  56 gcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||||||||| || ||||| |||||| || |||| |||||||||||||||||    
T  34646654 gcaattctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaatt 34646715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 29614146 - 29614201
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  29614146 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 29614201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 4477912 - 4477858
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 4477858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 23839253 - 23839199
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 23839199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 24512836 - 24512898
Alignment:
Q  55 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||| |||||||| |||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  24512836 tgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaatt 24512898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 12168418 - 12168366
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  12168418 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 12168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 19287327 - 19287275
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19287327 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19287275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 19785869 - 19785921
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19785869 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19785921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 19878511 - 19878459
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19878511 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19878459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 930095 - 930150
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||| || ||||| |||||| ||||||| |||| ||||||||||||    
T  930095 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaatt 930150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 18800493 - 18800438
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||| ||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  18800493 ctaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 18800438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 28288461 - 28288537
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaat 90  Q
    |||||||| | |||||||||||||| |||||| |  ||| |||||||||||||||||||||||| || ||||| |||||    
T  28288461 agagagaaaagcttaggaactgatt-gctgtgttt-ttgtctttgcaattctaaggtaagggtgagactatctctcaat 28288537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 115  Q
    ||||||||||||| || ||||| |||||| || ||||| ||||||||||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 19884287 - 19884235
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    ||||||| |||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19884287 ctaaggttagggtgagactatctctcaataatcataatctataatttctgaaa 19884235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 12 - 252
Target Start/End: Complemental strand, 135543 - 135304
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  135543 agagagaagagcttaggaactgatttgctgtgctatttgtctttgcaattctaaggtaagcgtgagattatctttcaatagtcataatatataatttctg 135444  T
Q  112 aaaattaatcaattgaactgttctt-aaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttg 210  Q
    ||||||||||||||||||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||| |  |||||    
T  135443 aaaattaatcaattgaactgttcttaaaggtaaaattgag-aattaagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttattgtgttg 135345  T
Q  211 tactttgatgattagtatgatttcttaatccatgttgatgat 252  Q
    || ||||||| ||||||||||||||||||| |||||| ||||    
T  135344 taatttgatg-ttagtatgatttcttaatctatgttgttgat 135304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 1862 - 2051
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||||||||||| |||||||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1862 agagagaagaacttaggaacggatttgctgtgctttttgtctttgcaattgtaaggtaagggtgggattatctttcaatagtcataatatataatttctg 1961  T
Q  112 aaaattaatcaattgaactgttctt-aaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggttt 201  Q
    ||||||||||||||||||||||||| || ||||||||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  1962 aaaattaatcaattgaactgttcttgaaagtaaaattggg-aattaagggttaatgatgattttgaaagaaaaggtgtaagaattaggttt 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 57 - 252
Target Start/End: Complemental strand, 9396 - 9201
Alignment:
Q  57 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaat 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || |    
T  9396 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaaagtaaaattggg-aatt 9298  T
Q  156 aagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgatgat 252  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||| |  ||||||| ||||||| |||||||||||||| |||| |||||| ||||    
T  9297 aagggttaatgatgattttgaaagaaaaggtgtaagaattaggtttattgtgttgtaatttgatgtttagtatgatttctcaatctatgttgttgat 9201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 12 - 227
Target Start/End: Complemental strand, 1101 - 889
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||| |||||| ||||||||||||||  ||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||| |||||||    
T  1101 agagagaagaacctaggaattgatttgctgtgctt-ttgtctttgcaattctaaggtaagggtgggatcatctctcaatagtgataatatatgatttctg 1003  T
Q  112 aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgt 211  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||  ||||||| ||||||| || ||||| | |||||| ||| |||||    
T  1002 aaaattaagcaatttaactgttcttatggtaaaattgggaaaattagggttaatggcgattttg-aagaaaatgtgtaagatttaggtttataaagttgt 904  T
Q  212 actttgatgattagta 227  Q
      ||||||||||||||    
T  903 -gtttgatgattagta 889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 240
Target Start/End: Complemental strand, 1420 - 1234
Alignment:
Q  52 ctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattggga 151  Q
    |||||||||||||||||||||||||||||  |||||||||||  ||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||    
T  1420 ctttgcaattctaaggtaagggtgggatttcctttcaatagtgttaatatatgctttctgaaaattaaacaatttaactgttcttaaggtaaaattggga 1321  T
Q  152 aaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 240  Q
    |||| |||  |||||||||||||| ||||||| |  ||||| ||||||||  |||||| ||  |||||||||||||||||||| |||||    
T  1320 aaattaggtctaatgatgattttg-aagaaaatgcgtaagattcaggtttacaatgttata-attgatgattagtatgatttcctaatc 1234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 233
Target Start/End: Original strand, 16023 - 16233
Alignment:
Q  21 aacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aaaattaa 119  Q
    ||||||||| ||||||||||||| |||||     | ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  16023 aacttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaaattaa 16122  T
Q  120 tcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgat 219  Q
    |||||| ||||||| ||||| ||||| | || || | ||||||||||||||||||| ||||||| ||  ||||||||||||  | |||||||| ||||||    
T  16123 tcaatttaactgtttttaagataaaaattgg-aatttagggttaatgatgattttg-aagaaaatgtgcaagaatcaggttcatgatgttgta-tttgat 16219  T
Q  220 gattagtatgattt 233  Q
    ||||||||||||||    
T  16220 gattagtatgattt 16233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 10344 - 10156
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||||||||||| |||||||||||||  ||| || | ||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||    
T  10344 agagagaagaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctg 10245  T
Q  112 aaaattaatcaattgaactgttcttaag-gtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggttt 201  Q
    ||||||||||||||||| ||||| | ||  ||||||||||  ||| |||||| ||| | ||||||||||  | ||| ||||||||| ||||    
T  10244 aaaattaatcaattgaattgttcatgagaataaaattggg--aattagggttgatgctaattttgaaagggatggtgtaagaatcatgttt 10156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 234
Target Start/End: Original strand, 91192 - 91374
Alignment:
Q  52 ctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt---aaaattg 148  Q
    |||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| |||   |||||||    
T  91192 ctttgcaattctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaattg 91291  T
Q  149 ggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttc 234  Q
    || |||| ||||||||||   |||||| ||||||| || ||||| | |||||| |||||||||| ||||||||||| |||||||||    
T  91292 gg-aaattagggttaatggcaattttg-aagaaaatgtgtaagatttaggtttataatgttgta-tttgatgattaatatgatttc 91374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 234
Target Start/End: Original strand, 96918 - 97100
Alignment:
Q  52 ctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt---aaaattg 148  Q
    |||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| |||   |||||||    
T  96918 ctttgcaattctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaattg 97017  T
Q  149 ggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttc 234  Q
    || |||| ||||||||||   |||||| ||||||| || ||||| | |||||| |||||||||| ||||||||||| |||||||||    
T  97018 gg-aaattagggttaatggcaattttg-aagaaaatgtgtaagatttaggtttataatgttgta-tttgatgattaatatgatttc 97100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 111938 - 111885
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 115  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  111938 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 111885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 492978 - 493162
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||||||||||| |||||||||||||  ||| || ||||||||||||||||||||| ||||||||||||||| || |||| |||||||||||    
T  492978 agagagaagaacttaggaacggatttgctgtgctttttgtctctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctg 493076  T
Q  112 aaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataagggt-taatgatgattttgaaagaaaaggtataagaatca 196  Q
    |||||||||| ||| |||  ||||||  || ||||||   || ||| ||||| ||||| ||||||||||||||||||| |||||||||    
T  493077 aaaattaatctaatggaatagttcttggagataaaat--agagaattagggtataatgctgattttgaaagaaaaggtgtaagaatca 493162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 10145 - 10250
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||||||||||| |||||||||||||  ||| || | |||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||    
T  10145 agagagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctg 10244  T
Q  112 aaaatt 117  Q
    ||||||    
T  10245 aaaatt 10250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 11042 - 11111
Alignment:
Q  21 aacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaat 90  Q
    ||||||||| ||||||||||||| |||||     |  |||||||||||||||||||||||||| ||||||    
T  11042 aacttaggagctgatttgctgtgttaattcttcctaaaattctaaggtaagggtgggattatccttcaat 11111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 1475 - 1580
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||||||||||||| |||||||||||||  ||| || | |||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||    
T  1475 agagagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctg 1574  T
Q  112 aaaatt 117  Q
    ||||||    
T  1575 aaaatt 1580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 240
Target Start/End: Original strand, 5847 - 6035
Alignment:
Q  52 ctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgg 149  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||| |||||||  |||||| ||| |||||||      
T  5847 ctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaaatt-- 5944  T
Q  150 gaaaataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 240  Q
    || ||| ||||| | | | |||||||||||| |||||| ||||||| | ||||   |||||||| ||||||| |  ||||||||||||||||    
T  5945 gagaattagggtatgaggctgattttgaaag-aaaggtgtaagaattatgtttaacatgttgtaatttgatgttatgtatgatttcttaatc 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 3352 - 3461
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||| ||||||||||||| ||||||| |||||  ||| ||||||||||||||||||||||||  |||||||||||||     ||||||||||||||||    
T  3352 agagaggagaacttaggaacggatttgccgtgctttttgtctttgcaattctaaggtaagggtgatattatctttcaatgaatttaatatataatttctg 3451  T
Q  112 aaaattaatc 121  Q
    ||||||||||    
T  3452 aaaattaatc 3461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 240
Target Start/End: Original strand, 23562 - 23748
Alignment:
Q  55 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaa 152  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||| ||  |||  |||||| |||  ||||||  ||     
T  23562 tgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatctaaaagaatagttcttgaagacaaaatt--gag 23659  T
Q  153 aataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 240  Q
    ||| ||||| | ||| ||||||||||||||||| | ||||||||| ||||    ||||||| ||||||| | |||||||||||||||||    
T  23660 aattagggtgtgatgctgattttgaaagaaaagatgtaagaatcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatc 23748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 107 - 6
Alignment:
Q  12 agagagaagaacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg 111  Q
    |||||||||| |||||||| ||| ||||||  ||  ||  ||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||    
T  107 agagagaagagcttaggaattgacttgctgcact--ttatctttgcaattctaaggtaagggtgggattatctttcaatagttctaatatatgatttctg 10  T
Q  112 aaaa 115  Q
    ||||    
T  9 aaaa 6  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 13884 - 13947
Alignment:
Q  52 ctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  13884 ctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 13947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 240
Target Start/End: Complemental strand, 73347 - 73161
Alignment:
Q  55 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaa 152  Q
    ||||||| | ||||||||||||||||||||||||||  ||||||| |||||||| |||||||||||| ||| | |  | |||| ||| |||||||  ||     
T  73347 tgcaattatgaggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctcttgaagataaaatt--gag 73250  T
Q  153 aataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 240  Q
    ||| ||||| | ||| ||||||||||||||| ||| ||||||||| ||||    ||||||| ||||||| |  ||||||||||||||||    
T  73249 aattagggtgtgatgttgattttgaaagaaacggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatc 73161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 240
Target Start/End: Original strand, 40524 - 40711
Alignment:
Q  55 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaat--taatcaattgaactgttcttaaggtaaaattgggaa 152  Q
    ||||| ||||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||  |  | |  |||| ||||||| || ||||| | || |    
T  40524 tgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgttttaacatgaattgttcttgagataaaaattggga 40623  T
Q  153 aataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 240  Q
    ||| |||||| ||| |||||||||||| || ||| |||| |||| ||||    ||||||| ||||||| | || ||||||||||||||    
T  40624 aattagggttgatgctgattttgaaaggaatggtgtaaggatcatgtttaacgtgttgtaatttgatgttcagaatgatttcttaatc 40711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 10546 - 10609
Alignment:
Q  58 aattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 121  Q
    |||||||||||||| ||||||||||||||||||  || |||| |||||||||||||||||||||    
T  10546 aattctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatc 10609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 16875 - 16736
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 159  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 16778  T
Q  160 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 201  Q
    ||| ||| |||||||||||| || ||| ||||||||| ||||    
T  16777 gttgatgctgattttgaaaggaatggtttaagaatcatgttt 16736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 240
Target Start/End: Complemental strand, 135530 - 135349
Alignment:
Q  61 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaat--taatcaattgaactgttcttaaggtaaaattgggaaaataag 158  Q
    ||||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||  |  | |  |||| ||||||| || ||||| | || |||| ||    
T  135530 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgttttaacatgaattgttcttgagataaaaattgggaaattag 135431  T
Q  159 ggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 240  Q
    |||| ||| |||||||||||| || ||| |||| |||| ||||    ||||||| ||||||| | || ||||||||||||||    
T  135430 ggttgatgctgattttgaaaggaatggtgtaaggatcatgtttaatgtgttgtaatttgatgttcagaatgatttcttaatc 135349  T

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Target: scaffold2054 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 770 - 717
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 115  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  770 ctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa 717  T

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Target: scaffold0099 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 240
Target Start/End: Complemental strand, 13019 - 12833
Alignment:
Q  64 aaggtaagggtgggattatcttt-caatagtcataatatataatttctgaaaa-ttaatcaa---ttgaactgttcttaa-ggtaaaatt--gggaaaat 155  Q
    ||||||||||||||||||||||| |||||||  |||||||| |||||| |||| |||||| |   || |||||||||||| ||||||| |  |||||| |    
T  13019 aaggtaagggtgggattatctttacaatagttctaatatatgatttctaaaaaattaatctaaattttaactgttcttaaaggtaaaaattggggaaatt 12920  T
Q  156 aagggttaatg-atgattttgaaagaaaaggtataagaatc-aggtttttaatgttgtactttgatgattagtatgatttcttaatc 240  Q
     |||||||||| |||||| |||| |||| |   |||||||| |||||| |||||||||| ||  ||||||||||||||||| |||||    
T  12919 tagggttaatgtatgattctgaaggaaatgtgttaagaatctaggtttataatgttgtatttgtatgattagtatgatttcctaatc 12833  T

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Target: scaffold0026 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 111747 - 111686
Alignment:
Q  56 gcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  111747 gcaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111686  T

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Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 11850 - 11905
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  11850 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 11905  T

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Target: scaffold0146 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 13687 - 13548
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 159  Q
    ||||||||||||| || ||||| |||||| || ||||| |||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 13590  T
Q  160 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 201  Q
    ||| ||| |||||||||||| || ||| ||||||||| ||||    
T  13589 gttgatgctgattttgaaaggaatggtgtaagaatcatgttt 13548  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 116951 - 116877
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 136  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 116877  T

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Target: scaffold0924 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 750 - 805
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  750 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 8 - 147
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 159  Q
    ||||||||||||| || ||||| |||||| || ||||| |||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 105  T
Q  160 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 201  Q
    |||  || |||||||||||| || ||| ||||||||| ||||    
T  106 gttgttgctgattttgaaaggaatggtgtaagaatcatgttt 147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 11397 - 11342
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  11397 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 11342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 30913 - 30858
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  30913 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 30858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 101928 - 102002
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 136  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||| ||||||||| ||| ||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattgaattgttctt 102002  T

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Target: scaffold0235 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 22585 - 22646
Alignment:
Q  55 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaat 116  Q
    ||||| || |||||||||||| || ||||| |||||| ||||| ||||||||||||||||||    
T  22585 tgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 17700 - 17644
Alignment:
Q  61 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||||| || ||||| ||||||  |||||| |||||||||||||||||    
T  17700 tctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaatt 17644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 14398 - 14450
Alignment:
Q  65 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 14450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 987 - 932
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||| || ||||| |||||| ||||||| |||| ||||||||||||    
T  987 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaatt 932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 8132 - 8077
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||| || ||||| |||||| ||||||| |||| ||||||||||||    
T  8132 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaatt 8077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 18225 - 18170
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||| ||||||||    
T  18225 ctaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaatt 18170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 1485 - 1543
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 121  Q
    ||||||||||||| ||||||||| ||||  || ||||||  ||||||||||||||||||    
T  1485 taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc 1543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 1441 - 1387
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || |||||||||||  |||| ||||||||||| ||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaatt 1387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 45268 - 45326
Alignment:
Q  56 gcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||| ||||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  45268 gcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 45326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 34276 - 34330
Alignment:
Q  63 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 117  Q
    ||||||||||||| || ||||| || ||| ||||| |||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaatt 34330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 1242 - 1181
Alignment:
Q  53 tttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||  |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  1242 tttgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 1181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 1691 - 1784
Alignment:
Q  21 aacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    ||||||||| ||||||||||||| |||||     | |||  |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  1691 aacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 5714 - 5807
Alignment:
Q  21 aacttaggaactgatttgctgtgctaattgcctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    ||||||||| ||||||||||||| |||||     | |||  |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  5714 aacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 5807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 1897 - 1950
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 115  Q
    |||||||||||||| || ||| | |||||| ||||||| |||||||||||||||    
T  1897 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaa 1950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 8574 - 8627
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 115  Q
    |||||||||||||| || ||| | |||||| ||||||| |||||||||||||||    
T  8574 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaa 8627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 346 - 294
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| ||||||  |||||| ||||||||||||||    
T  346 ctaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa 294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 50234 - 50182
Alignment:
Q  62 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  50234 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 50182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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