View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15114_low_5 (Length: 287)

Name: NF15114_low_5
Description: NF15114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15114_low_5
NF15114_low_5
[»] chr8 (20 HSPs)
chr8 (1-278)||(2785670-2785946)
chr8 (138-206)||(30253616-30253684)
chr8 (138-193)||(39198872-39198927)
chr8 (138-192)||(17494979-17495033)
chr8 (138-193)||(21660729-21660784)
chr8 (138-193)||(26187384-26187439)
chr8 (138-193)||(27713020-27713075)
chr8 (138-193)||(28828219-28828274)
chr8 (138-193)||(29596405-29596460)
chr8 (138-193)||(33279194-33279249)
chr8 (139-193)||(24419699-24419753)
chr8 (155-193)||(39198618-39198656)
chr8 (155-193)||(42684790-42684828)
chr8 (138-195)||(7672641-7672698)
chr8 (148-193)||(17494767-17494812)
chr8 (138-195)||(30464170-30464227)
chr8 (148-193)||(33278938-33278983)
chr8 (138-195)||(34632481-34632538)
chr8 (199-243)||(5253410-5253454)
chr8 (149-193)||(26938451-26938495)
[»] chr2 (30 HSPs)
chr2 (138-193)||(30488083-30488138)
chr2 (138-195)||(23926647-23926704)
chr2 (139-195)||(3889128-3889184)
chr2 (138-193)||(1479031-1479086)
chr2 (138-193)||(10714264-10714319)
chr2 (155-193)||(9027298-9027336)
chr2 (138-192)||(18508715-18508769)
chr2 (138-195)||(9911910-9911967)
chr2 (148-193)||(10192087-10192132)
chr2 (145-193)||(9912176-9912224)
chr2 (149-193)||(16350590-16350634)
chr2 (138-193)||(10192341-10192396)
chr2 (138-193)||(13421075-13421130)
chr2 (138-193)||(15461258-15461313)
chr2 (138-193)||(15461511-15461566)
chr2 (138-193)||(20663914-20663969)
chr2 (138-193)||(26499667-26499722)
chr2 (138-193)||(28789123-28789178)
chr2 (138-193)||(29154067-29154122)
chr2 (138-193)||(30488336-30488391)
chr2 (138-193)||(33274653-33274708)
chr2 (138-193)||(35412133-35412188)
chr2 (138-193)||(42950765-42950820)
chr2 (155-193)||(1650776-1650814)
chr2 (159-193)||(12937661-12937695)
chr2 (155-193)||(17549342-17549380)
chr2 (139-193)||(19079263-19079317)
chr2 (155-193)||(26499425-26499463)
chr2 (138-194)||(22195926-22195982)
chr2 (138-193)||(31557004-31557060)
[»] chr7 (33 HSPs)
chr7 (138-195)||(7173187-7173244)
chr7 (138-194)||(45867701-45867757)
chr7 (138-195)||(8522568-8522625)
chr7 (141-193)||(31115840-31115892)
chr7 (138-193)||(19124834-19124889)
chr7 (138-193)||(31813733-31813788)
chr7 (138-193)||(45055325-45055380)
chr7 (138-193)||(46426664-46426719)
chr7 (139-193)||(29099431-29099485)
chr7 (138-195)||(7149292-7149349)
chr7 (138-195)||(8806000-8806057)
chr7 (138-195)||(11338148-11338205)
chr7 (138-194)||(12424102-12424158)
chr7 (138-193)||(8522327-8522382)
chr7 (138-193)||(11337895-11337950)
chr7 (138-193)||(12423848-12423903)
chr7 (138-193)||(24331636-24331691)
chr7 (138-193)||(28588320-28588375)
chr7 (138-193)||(38495170-38495225)
chr7 (138-193)||(41922285-41922340)
chr7 (138-193)||(42391299-42391354)
chr7 (138-193)||(43575306-43575361)
chr7 (138-193)||(44458040-44458095)
chr7 (138-193)||(45055578-45055633)
chr7 (138-193)||(45062318-45062373)
chr7 (138-193)||(47221710-47221765)
chr7 (155-193)||(32165228-32165266)
chr7 (155-193)||(49114280-49114318)
chr7 (138-195)||(2699873-2699930)
chr7 (138-195)||(8805745-8805802)
chr7 (138-207)||(9979297-9979366)
chr7 (138-206)||(19125088-19125155)
chr7 (149-193)||(31813985-31814029)
[»] chr5 (24 HSPs)
chr5 (138-195)||(33429534-33429591)
chr5 (138-193)||(16737059-16737114)
chr5 (138-193)||(7601849-7601904)
chr5 (138-209)||(14871991-14872062)
chr5 (138-193)||(18707266-18707321)
chr5 (138-193)||(24858659-24858714)
chr5 (138-193)||(30129478-30129533)
chr5 (138-193)||(37943785-37943840)
chr5 (138-195)||(7610264-7610321)
chr5 (138-193)||(1643542-1643597)
chr5 (138-193)||(3168336-3168390)
chr5 (138-193)||(6541465-6541520)
chr5 (138-193)||(14871737-14871792)
chr5 (138-193)||(16736804-16736859)
chr5 (138-193)||(19131126-19131181)
chr5 (138-193)||(32771994-32772049)
chr5 (138-193)||(33429789-33429844)
chr5 (138-193)||(39589618-39589673)
chr5 (138-193)||(40881609-40881664)
chr5 (138-193)||(40952070-40952125)
chr5 (155-193)||(2426232-2426270)
chr5 (138-195)||(2426486-2426543)
chr5 (138-191)||(13697574-13697627)
chr5 (1-48)||(34159304-34159349)
[»] chr3 (31 HSPs)
chr3 (138-195)||(11221248-11221305)
chr3 (138-195)||(29434302-29434359)
chr3 (138-193)||(31574509-31574564)
chr3 (138-193)||(38674984-38675039)
chr3 (138-191)||(15543255-15543308)
chr3 (138-195)||(29434557-29434614)
chr3 (138-207)||(44919886-44919955)
chr3 (139-195)||(18168757-18168813)
chr3 (149-193)||(44664624-44664668)
chr3 (138-193)||(6954253-6954308)
chr3 (138-193)||(11220995-11221050)
chr3 (138-193)||(11989518-11989573)
chr3 (138-193)||(14202052-14202107)
chr3 (138-193)||(14463379-14463434)
chr3 (138-193)||(18169010-18169065)
chr3 (138-193)||(20209153-20209208)
chr3 (138-193)||(21017181-21017236)
chr3 (138-193)||(25061304-25061359)
chr3 (138-193)||(36546105-36546160)
chr3 (138-193)||(36562154-36562209)
chr3 (138-193)||(50711251-50711306)
chr3 (138-204)||(15542991-15543057)
chr3 (155-193)||(50710895-50710933)
chr3 (155-193)||(50711129-50711167)
chr3 (138-195)||(21016922-21016979)
chr3 (138-195)||(35747948-35748005)
chr3 (138-195)||(44920154-44920211)
chr3 (138-191)||(50710708-50710761)
chr3 (138-195)||(53712252-53712309)
chr3 (138-194)||(27812827-27812883)
chr3 (138-210)||(28843988-28844060)
[»] chr4 (38 HSPs)
chr4 (138-193)||(16530321-16530376)
chr4 (139-193)||(25331818-25331872)
chr4 (143-195)||(17688021-17688073)
chr4 (138-193)||(7067498-7067553)
chr4 (138-193)||(9902912-9902967)
chr4 (138-193)||(10993628-10993683)
chr4 (138-193)||(15516309-15516364)
chr4 (138-193)||(16019960-16020015)
chr4 (138-193)||(32922070-32922125)
chr4 (138-193)||(35130794-35130849)
chr4 (138-193)||(35131052-35131107)
chr4 (138-193)||(39791920-39791975)
chr4 (138-193)||(46648279-46648334)
chr4 (155-193)||(44834982-44835020)
chr4 (138-195)||(26843055-26843112)
chr4 (138-195)||(39792175-39792232)
chr4 (138-195)||(52537880-52537937)
chr4 (1-88)||(23962950-23963034)
chr4 (138-193)||(9902656-9902711)
chr4 (138-193)||(20984170-20984225)
chr4 (138-193)||(32922323-32922378)
chr4 (138-193)||(38555945-38556000)
chr4 (138-193)||(41376587-41376642)
chr4 (138-193)||(44551171-44551226)
chr4 (138-193)||(45655948-45656003)
chr4 (138-193)||(46648072-46648127)
chr4 (138-193)||(52538135-52538190)
chr4 (138-193)||(52653934-52653989)
chr4 (138-193)||(52654188-52654243)
chr4 (138-193)||(54036867-54036922)
chr4 (156-193)||(10993895-10993932)
chr4 (148-208)||(9644740-9644800)
chr4 (149-193)||(15516572-15516616)
chr4 (138-206)||(22539944-22540011)
chr4 (138-194)||(23572857-23572913)
chr4 (155-195)||(26842801-26842841)
chr4 (145-193)||(37068688-37068736)
chr4 (149-193)||(45655696-45655740)
[»] chr1 (34 HSPs)
chr1 (138-193)||(17191201-17191256)
chr1 (138-195)||(40770396-40770453)
chr1 (138-195)||(40934674-40934731)
chr1 (138-193)||(5586743-5586798)
chr1 (138-193)||(6488874-6488929)
chr1 (149-195)||(731066-731112)
chr1 (139-193)||(17504038-17504092)
chr1 (155-193)||(44344297-44344335)
chr1 (138-195)||(8828577-8828634)
chr1 (138-206)||(5618061-5618129)
chr1 (155-195)||(33471417-33471457)
chr1 (138-193)||(4695192-4695247)
chr1 (138-193)||(12649925-12649980)
chr1 (138-193)||(12650178-12650233)
chr1 (138-193)||(28554193-28554248)
chr1 (138-193)||(31289257-31289312)
chr1 (138-193)||(34480187-34480242)
chr1 (138-193)||(44344026-44344081)
chr1 (138-193)||(45286235-45286290)
chr1 (138-193)||(45315260-45315314)
chr1 (138-193)||(49021922-49021977)
chr1 (155-193)||(730802-730840)
chr1 (155-193)||(8853099-8853137)
chr1 (155-193)||(8853368-8853406)
chr1 (155-193)||(25012920-25012958)
chr1 (155-193)||(26095763-26095801)
chr1 (155-193)||(39672839-39672877)
chr1 (138-195)||(8641203-8641260)
chr1 (138-195)||(10296593-10296650)
chr1 (138-194)||(1501521-1501577)
chr1 (155-195)||(16515907-16515947)
chr1 (4-115)||(29570666-29570770)
chr1 (145-193)||(30146322-30146370)
chr1 (155-195)||(48970970-48971010)
[»] scaffold0024 (1 HSPs)
scaffold0024 (138-193)||(107855-107910)
[»] chr6 (18 HSPs)
chr6 (138-193)||(8129789-8129844)
chr6 (138-193)||(9220106-9220161)
chr6 (138-193)||(9546667-9546722)
chr6 (138-193)||(24325249-24325304)
chr6 (138-195)||(684954-685011)
chr6 (148-193)||(24324995-24325040)
chr6 (153-193)||(1925119-1925159)
chr6 (138-193)||(2316745-2316800)
chr6 (138-193)||(9220359-9220414)
chr6 (138-193)||(9899198-9899253)
chr6 (138-193)||(9899451-9899506)
chr6 (138-193)||(13853145-13853200)
chr6 (138-193)||(25121753-25121808)
chr6 (155-193)||(1925424-1925462)
chr6 (155-193)||(21926067-21926105)
chr6 (138-195)||(22569019-22569076)
chr6 (155-195)||(685226-685266)
chr6 (138-206)||(17853899-17853967)
[»] scaffold0005 (1 HSPs)
scaffold0005 (149-193)||(257695-257739)
[»] scaffold0077 (1 HSPs)
scaffold0077 (138-193)||(10175-10230)
[»] scaffold0009 (1 HSPs)
scaffold0009 (155-193)||(258758-258796)


Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 2785946 - 2785670
Alignment:
Q  1 tttattttcttatggcatctcaatcttcataaatctatagtctttcatctttgtttgcacataattattagatttgaaacttgaaattcaaatccatatg 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2785946 tttattttcttatggcctctcaatcttcataaatctatagtctttcatctttgtttgcacataattattagatttgaaacttgaaatccaaatccatatg 2785847  T
Q  101 caaatggactaaaaggacnnnnnnnnnnnnnnnnnnngataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttacttgta 200  Q
    ||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2785846 caaatggactaaaaggacaaaaataaaatgaaaaaa-gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttacctgta 2785748  T
Q  201 ttttttatatttgctacaacaacgtttcttggctttaaatcctacgttttgtatacataaactttattataccctatg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2785747 ttttttatatttgctacaacaacgtttcttggctttaaatcctacgttttgtatacataaactttattataccctatg 2785670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 30253684 - 30253616
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttacttgtatttttt 206  Q
    ||||||||| |||| | ||||||||||||||||||| ||| |||||||||||||||  || ||||||||    
T  30253684 gataaatgaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgtttttatttttt 30253616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 39198872 - 39198927
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| |||||||||||||||||||    
T  39198872 gataaaggaccaaactgttacctgaaattaagttaagggattaaaagtgtaatttt 39198927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 17494979 - 17495033
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattt 192  Q
    ||||||||| |||| | ||||||||||||||||||| ||| ||||||||||||||    
T  17494979 gataaatgaccaaaatgttacctgaaattaagttaagggactaaaagtgtaattt 17495033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 21660784 - 21660729
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  21660784 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 21660729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 26187384 - 26187439
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||||||| ||||| |||||||||    
T  26187384 gataaaggaccaaactgttacctgaaattaagttaacggactaaaattgtaatttt 26187439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 27713020 - 27713075
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  27713020 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 27713075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 28828274 - 28828219
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| |||| |||||||||||||| ||| |||||||||||||||    
T  28828274 gataaaggaccaaattgttacttgaaattaagttaagggactaaaagtgtaatttt 28828219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 29596460 - 29596405
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  29596460 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 29596405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 33279194 - 33279249
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  33279194 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 33279249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 24419699 - 24419753
Alignment:
Q  139 ataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||| ||||||||| |||||| |||||||||||| ||||||||| | |||||||    
T  24419699 ataaaggatcaaattattacctaaaattaagttaagggattaaaaatataatttt 24419753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 39198656 - 39198618
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  39198656 ttacctgaaattaagttaagggactaaaagtgtaatttt 39198618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 42684828 - 42684790
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  42684828 ttacctgaaattaagttaagggactaaaagtgtaatttt 42684790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 7672698 - 7672641
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| ||||||||| |||| | ||||||||||||  || |||||||||||||||||    
T  7672698 gataaaagatcaaattattacataaaattaagttaagagactaaaagtgtaattttac 7672641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 17494812 - 17494767
Alignment:
Q  148 caaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||||||||||||| ||| |||||||||||||||    
T  17494812 caaattgtttcctgaaattaagttaagggactaaaagtgtaatttt 17494767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 30464170 - 30464227
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| ||||||| | |||  |||||||||||||| ||| |||||||||||||||||    
T  30464170 gataaaggatcaaactgttatttgaaattaagttaaaggactaaaagtgtaattttac 30464227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 33278983 - 33278938
Alignment:
Q  148 caaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| |||||||||||||||||||  || |||||||||||||||    
T  33278983 caaattgttacctgaaattaagttaagagactaaaagtgtaatttt 33278938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 34632481 - 34632538
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | ||||||||||||||||||| ||| ||||| |||||||||||    
T  34632481 gataaaggaccaaactgttacctgaaattaagttaagggactaaaaatgtaattttac 34632538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 5253410 - 5253454
Alignment:
Q  199 tattttttatatttgctacaacaacgtttcttggctttaaatcct 243  Q
    |||||||||||||| |||||||||||||| ||| ||||| |||||    
T  5253410 tattttttatatttactacaacaacgtttattgactttatatcct 5253454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 26938451 - 26938495
Alignment:
Q  149 aaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||| |||||| |||||||||||| ||| |||||||||||||||    
T  26938451 aaattgttacctaaaattaagttaagggactaaaagtgtaatttt 26938495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 30488138 - 30488083
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  30488138 gataaatgatcaaattgttacctgaaattaagttaagggattaaaagtgtaatttt 30488083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 23926647 - 23926704
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  23926647 gataaaagatcaaattgttacctgaaattaagttaagggattaaaagtgtaattttac 23926704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 3889128 - 3889184
Alignment:
Q  139 ataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    ||||| ||||||| | ||||||||||||||||||| ||| |||||||||||||||||    
T  3889128 ataaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaattttac 3889184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 1479086 - 1479031
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||||| ||||||||||||||||||| | | |||||||||||||||    
T  1479086 gataaatgaccaaattattacctgaaattaagttaaggaactaaaagtgtaatttt 1479031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 10714264 - 10714319
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  10714264 gataaatgaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 10714319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 9027298 - 9027336
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  9027298 ttacctgaaattaagttaagggattaaaagtgtaatttt 9027336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 18508715 - 18508769
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattt 192  Q
    |||||| || |||||| ||| ||||||||||||||| ||||||||||||||||||    
T  18508715 gataaaagaccaaattgttagctgaaattaagttaagggattaaaagtgtaattt 18508769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 9911967 - 9911910
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||||    
T  9911967 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttac 9911910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 10192132 - 10192087
Alignment:
Q  148 caaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||    
T  10192132 caaattgttacctgaaattaagttaagggactaaaagtgtaatttt 10192087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 9912176 - 9912224
Alignment:
Q  145 gatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||| | |||||| |||||||||||| |||||||||||||||||||    
T  9912176 gatcaaactgttacctaaaattaagttaagggattaaaagtgtaatttt 9912224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 16350634 - 16350590
Alignment:
Q  149 aaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||    
T  16350634 aaattgttacctgaaattaagttaagggattaaaaatgtaatttt 16350590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 10192341 - 10192396
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||||| |||  |||||||||||||| ||||||||||| |||||||    
T  10192341 gataaaggatcaaattgttatttgaaattaagttaagggattaaaagtataatttt 10192396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 13421130 - 13421075
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  13421130 gataaaggaccaaactattacctgaaattaagttaaaggactaaaagtgtaatttt 13421075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 15461313 - 15461258
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||| |  |||||||||||| ||||| |||||||||||||||||||    
T  15461313 gataaaggatcaaactggtacctgaaattacgttaagggattaaaagtgtaatttt 15461258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 15461511 - 15461566
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||||||  ||| | ||||||||||||||||||| ||| |||||||||||||||    
T  15461511 gataaatgactaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 15461566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 20663914 - 20663969
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  20663914 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 20663969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 26499667 - 26499722
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  26499667 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 26499722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 28789123 - 28789178
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  28789123 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 28789178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 29154122 - 29154067
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| ||| ||||||||||||||| ||| |||||||||||||||    
T  29154122 gataaaggaccaaattgttaactgaaattaagttaagggactaaaagtgtaatttt 29154067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 30488336 - 30488391
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  30488336 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 30488391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 33274653 - 33274708
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| |||||| |||||||||||| ||| |||||||||||||||    
T  33274653 gataaaggaccaaattgttacctaaaattaagttaagggactaaaagtgtaatttt 33274708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 35412133 - 35412188
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  35412133 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 35412188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 42950765 - 42950820
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||| | |||||||||||||| |||| ||| |||||||||||||||    
T  42950765 gataaatgaccaaactgttacctgaaattaaattaagggactaaaagtgtaatttt 42950820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 1650776 - 1650814
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  1650776 ttacctgaaattaagttaagggactaaaagtgtaatttt 1650814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 193
Target Start/End: Original strand, 12937661 - 12937695
Alignment:
Q  159 ctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||| |||||||||||||||||||    
T  12937661 ctgaaattaagttaagggattaaaagtgtaatttt 12937695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 17549342 - 17549380
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  17549342 ttacttgaaattaagttaagggattaaaagtgtaatttt 17549380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 19079317 - 19079263
Alignment:
Q  139 ataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||| || |||| |||||||| | |||||||||| |||||||||||||||||||    
T  19079317 ataaaggaccaaacttttacctaatattaagttaagggattaaaagtgtaatttt 19079263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 26499463 - 26499425
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  26499463 ttacctgaaattaagttaagggactaaaagtgtaatttt 26499425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 22195982 - 22195926
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttta 194  Q
    ||||||||| |||| | |||||| |||||||||||| ||| ||||| ||||||||||    
T  22195982 gataaatgaccaaactgttacctaaaattaagttaagggactaaaactgtaatttta 22195926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 31557004 - 31557060
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacgga-ttaaaagtgtaatttt 193  Q
    ||||||||| |||| | ||||||||||||||||||| ||| | ||||||||||||||    
T  31557004 gataaatgaccaaactgttacctgaaattaagttaagggactaaaaagtgtaatttt 31557060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 7173187 - 7173244
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| ||||||| | ||||||||||||||||||| |||||||||||||||||||||    
T  7173187 gataaaggatcaaactgttacctgaaattaagttaagggattaaaagtgtaattttac 7173244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 45867701 - 45867757
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttta 194  Q
    ||||||||| |||| | ||||||||||||||||||| ||||||||||||||||||||    
T  45867701 gataaatgaccaaactgttacctgaaattaagttaagggattaaaagtgtaatttta 45867757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 8522568 - 8522625
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  8522568 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttac 8522625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 31115892 - 31115840
Alignment:
Q  141 aaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| |||||| ||||||||||||||||||| ||| |||||||||||||||    
T  31115892 aaatgaccaaattgttacctgaaattaagttaagggactaaaagtgtaatttt 31115840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 19124889 - 19124834
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||||| |||||| || ||||||||| |||||||||||||||||||    
T  19124889 gataaaggatcaaattgttacctaaacttaagttaagggattaaaagtgtaatttt 19124834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 31813788 - 31813733
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| |||||||||||||||||||    
T  31813788 gataaaggaccaaactgttacctgaaattaagttaagggattaaaagtgtaatttt 31813733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 45055380 - 45055325
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| ||||||||||||||||||| ||| |||||||||||||||    
T  45055380 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaatttt 45055325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 46426719 - 46426664
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| |||||| |||||||||||| |||||||||||||||||||    
T  46426719 gataaaggaccaaattgttacctaaaattaagttaaaggattaaaagtgtaatttt 46426664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 29099431 - 29099485
Alignment:
Q  139 ataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||| ||||||| | ||||||||||||||||||| ||| |||||||||||||||    
T  29099431 ataaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 29099485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 7149349 - 7149292
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||||    
T  7149349 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttac 7149292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 8806000 - 8806057
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||||    
T  8806000 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttac 8806057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 11338148 - 11338205
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||||| ||||||||||||||||||| ||| ||||| |||||||||||    
T  11338148 gataaaggaccaaattgttacctgaaattaagttaagggactaaaaatgtaattttac 11338205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 12424102 - 12424158
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttta 194  Q
    |||||| || |||| | ||||||||||||||||||| ||| ||||||||||||||||    
T  12424102 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttta 12424158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 8522382 - 8522327
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  8522382 gataaaggaccaaaatgttacctgaaattaagttaagggactaaaagtgtaatttt 8522327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 11337950 - 11337895
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| |||| |||||||||||||| ||| |||||||||||||||    
T  11337950 gataaaggaccaaattgttacatgaaattaagttaaaggactaaaagtgtaatttt 11337895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 12423903 - 12423848
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  12423903 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 12423848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 24331636 - 24331691
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| ||| ||||||||||||||| ||| |||||||||||||||    
T  24331636 gataaaggaccaaattattatctgaaattaagttaagggactaaaagtgtaatttt 24331691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 28588375 - 28588320
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  28588375 gataaaagaccaaactgttacctgaaattaagttaaaggactaaaagtgtaatttt 28588320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 38495170 - 38495225
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  38495170 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 38495225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 41922340 - 41922285
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  41922340 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 41922285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 42391354 - 42391299
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  42391354 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 42391299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 43575306 - 43575361
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  43575306 gataaaggaccaaaatgttacctgaaattaagttaagggactaaaagtgtaatttt 43575361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 44458040 - 44458095
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  44458040 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 44458095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 45055578 - 45055633
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  45055578 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 45055633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 45062318 - 45062373
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  45062318 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 45062373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 47221765 - 47221710
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||| | ||||||||||||||||||| ||| ||||| |||||||||    
T  47221765 gataaatgaccaaactgttacctgaaattaagttaagggactaaaaatgtaatttt 47221710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 32165266 - 32165228
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  32165266 ttacctgaaattaagttaatggactaaaagtgtaatttt 32165228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 49114318 - 49114280
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  49114318 ttacctgaaattaagttaaatgattaaaagtgtaatttt 49114280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 2699873 - 2699930
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | |||||||||||||||||||  || |||||||||||||||||    
T  2699873 gataaaggaccaaactgttacctgaaattaagttaagagactaaaagtgtaattttac 2699930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 8805802 - 8805745
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | ||||||||||||||||||| ||| ||||| |||||||||||    
T  8805802 gataaaggaccaaactgttacctgaaattaagttaagggactaaaaatgtaattttac 8805745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 9979366 - 9979297
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttacttgtatttttta 207  Q
    |||||| ||||| | | ||||||||||||||||||| ||| | ||||||||||||| | | |||||||||    
T  9979366 gataaaggatcagactgttacctgaaattaagttaagggacttaaagtgtaatttttcctatatttttta 9979297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 19125088 - 19125155
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttacttgtatttttt 206  Q
    |||||| || |||| | ||||||||||||||||||| ||| | ||||||||||||||| | ||||||||    
T  19125088 gataaaggaccaaactgttacctgaaattaagttaagggact-aaagtgtaattttacctttatttttt 19125155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 31813985 - 31814029
Alignment:
Q  149 aaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||| ||| ||||||||||||||| ||| |||||||||||||||    
T  31813985 aaattgttatctgaaattaagttaagggactaaaagtgtaatttt 31814029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 33429591 - 33429534
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  33429591 gataaaggaccaaattgttacctgaaattaagttaaaggattaaaagtgtaattttac 33429534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 16737059 - 16737114
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||||| ||||||||||||||||||| ||| |||||||||||||||    
T  16737059 gataaatgaccaaattattacctgaaattaagttaagggactaaaagtgtaatttt 16737114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 7601849 - 7601904
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  7601849 gataaatgaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 7601904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 14871991 - 14872062
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttacttgtattttttata 209  Q
    |||||| || |||| | ||||||||||||||||||| ||||||||| ||||||||||| | |||| ||||||    
T  14871991 gataaaggaccaaactgttacctgaaattaagttaagggattaaaaatgtaattttacctttattatttata 14872062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 18707321 - 18707266
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| |||||||||||||||||||    
T  18707321 gataaaagaccaaactgttacctgaaattaagttaaaggattaaaagtgtaatttt 18707266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 24858659 - 24858714
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||| | |||||||| |||||||||| |||||||||||||||||||    
T  24858659 gataaaggatcaaactgttacctgacattaagttaagggattaaaagtgtaatttt 24858714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 30129533 - 30129478
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| ||||||||||||||||||| ||| |||||||||||||||    
T  30129533 gataaaagaccaaattgttacctgaaattaagttaaaggactaaaagtgtaatttt 30129478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 37943785 - 37943840
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||||| ||| ||||||||||||||| ||| |||||||||||||||    
T  37943785 gataaatgaccaaattattatctgaaattaagttaagggactaaaagtgtaatttt 37943840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 7610321 - 7610264
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||||    
T  7610321 gataaaggaccaaactattacctgaaattaagttaagggactaaaagtgtaattttac 7610264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 1643597 - 1643542
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  1643597 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 1643542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 3168336 - 3168390
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||| | |||||| ||||||||||||||||||| |||| ||||||||||||||    
T  3168336 gataaataaccaaattgttacctgaaattaagttaa-ggatcaaaagtgtaatttt 3168390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 6541465 - 6541520
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||| | |||||| |||||||||||| ||| |||||||||||||||    
T  6541465 gataaaggatcaaactgttacctaaaattaagttaaaggactaaaagtgtaatttt 6541520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 14871792 - 14871737
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  14871792 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 14871737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 16736859 - 16736804
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  16736859 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 16736804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 19131126 - 19131181
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  19131126 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 19131181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 32772049 - 32771994
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  32772049 gataaaggaccaaactgttacctgaaattaagttaaaggactaaaagtgtaatttt 32771994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 33429789 - 33429844
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  33429789 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 33429844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 39589673 - 39589618
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  39589673 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 39589618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 40881609 - 40881664
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||| | |||| | |||||||||||| |||||||||||||||||||    
T  40881609 gataaaggatcaaactattacttaaaattaagttaagggattaaaagtgtaatttt 40881664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 40952125 - 40952070
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  40952125 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 40952070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 2426270 - 2426232
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  2426270 ttacctgaaattaagttaagggactaaaagtgtaatttt 2426232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 2426486 - 2426543
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | ||| ||||||||||||||| ||| |||||||||||||||||    
T  2426486 gataaaagaccaaactgttatctgaaattaagttaagggactaaaagtgtaattttac 2426543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 13697574 - 13697627
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatt 191  Q
    ||||||||| |||  | ||| ||||||||||||||| |||||||||||||||||    
T  13697574 gataaatgaccaatctgttatctgaaattaagttaagggattaaaagtgtaatt 13697627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 34159304 - 34159349
Alignment:
Q  1 tttattttcttatggcatctcaatcttcataaatctatagtctttcat 48  Q
    |||||||||||||||| ||||||||||  |||||||||| ||||||||    
T  34159304 tttattttcttatggcctctcaatctt--taaatctataatctttcat 34159349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 11221248 - 11221305
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  11221248 gataaaggaccaaattgttacctgaaattaagttaagggattaaaagtgtaattttac 11221305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 29434359 - 29434302
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| ||||||||| ||||||||||||||||||| ||| ||||||| |||||||||    
T  29434359 gataaaggatcaaattgttacctgaaattaagttaagggactaaaagtataattttac 29434302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 31574509 - 31574564
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| ||||||||||||||||||| ||| |||||||||||||||    
T  31574509 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaatttt 31574564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 38675039 - 38674984
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| |||||||||||||||||||    
T  38675039 gataaaggaccaaactgttacctgaaattaagttaagggattaaaagtgtaatttt 38674984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 15543255 - 15543308
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatt 191  Q
    |||||| ||||||| | ||||||||||||||||||| ||| |||||||||||||    
T  15543255 gataaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaatt 15543308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 29434557 - 29434614
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||||    
T  29434557 gataaaggaccaaactgttacctgaaattaagttaaaggactaaaagtgtaattttac 29434614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 44919955 - 44919886
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttacttgtatttttta 207  Q
    ||||||||| |||| | ||||||||||||||||||| ||| ||||| ||||||||| |||  ||||||||    
T  44919955 gataaatgaccaaactattacctgaaattaagttaagggactaaaaatgtaattttgcttaaatttttta 44919886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 18168813 - 18168757
Alignment:
Q  139 ataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    ||||| || |||||| ||||| |||||||| |||| |||||||||||||||||||||    
T  18168813 ataaaggaccaaattattaccggaaattaaattaagggattaaaagtgtaattttac 18168757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 44664668 - 44664624
Alignment:
Q  149 aaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||    
T  44664668 aaattgttacctgaaattaagttaagggactaaaagtgtaatttt 44664624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 6954253 - 6954308
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||||| ||| || |||||||||||| ||| |||||||||||||||    
T  6954253 gataaatgaccaaattgttatctaaaattaagttaagggactaaaagtgtaatttt 6954308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 11221050 - 11220995
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||| | |||||| |||||||||||| ||| |||||||||||||||    
T  11221050 gataaaggatcaaactgttacctaaaattaagttaagggactaaaagtgtaatttt 11220995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 11989573 - 11989518
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| |||||| |||||||||||| ||| |||||||||||||||    
T  11989573 gataaaggaccaaattattacctaaaattaagttaagggactaaaagtgtaatttt 11989518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 14202052 - 14202107
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||| | ||| ||||||||||||||| ||| |||||||||||||||    
T  14202052 gataaaggatcaaactgttatctgaaattaagttaagggactaaaagtgtaatttt 14202107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 14463379 - 14463434
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  14463379 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 14463434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 18169010 - 18169065
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||| | ||| ||||||||||||||| ||| |||||||||||||||    
T  18169010 gataaatgaccaaactgttatctgaaattaagttaagggactaaaagtgtaatttt 18169065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 20209208 - 20209153
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  20209208 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 20209153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 21017181 - 21017236
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||| | ||||||||||||||||||| | | |||||||||||||||    
T  21017181 gataaatgaccaaactgttacctgaaattaagttaaggaactaaaagtgtaatttt 21017236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 25061359 - 25061304
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| ||||||||||||||||||| |||  ||||||||||||||    
T  25061359 gataaaggaccaaattgttacctgaaattaagttaagggaccaaaagtgtaatttt 25061304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 36546160 - 36546105
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| ||||||||||||||||||| ||| ||||| |||||||||    
T  36546160 gataaaggaccaaattgttacctgaaattaagttaaaggactaaaaatgtaatttt 36546105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 36562154 - 36562209
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| ||||||||||||||||||| ||| ||||| |||||||||    
T  36562154 gataaaggaccaaattgttacctgaaattaagttaaaggactaaaaatgtaatttt 36562209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 50711251 - 50711306
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  50711251 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 50711306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 15543057 - 15542991
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttacttgtatttt 204  Q
    |||||| || |||| | |||| |||||||||||||| | ||||||||||||||||||| | ||||||    
T  15543057 gataaaggaccaaactgttacatgaaattaagttaaggaattaaaagtgtaattttacctatatttt 15542991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 50710933 - 50710895
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  50710933 ttacctgaaattaagttaagggactaaaagtgtaatttt 50710895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 50711129 - 50711167
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  50711129 ttacctgaaattaagttaagggactaaaagtgtaatttt 50711167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 21016979 - 21016922
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    ||||||||| |||  | |||||||||||||| |||| ||||||||||| |||||||||    
T  21016979 gataaatgaccaatctgttacctgaaattaaattaagggattaaaagtataattttac 21016922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 35747948 - 35748005
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | ||||||||||||||||||| | | |||||||||||||||||    
T  35747948 gataaaggaccaaactgttacctgaaattaagttaaggaactaaaagtgtaattttac 35748005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 44920154 - 44920211
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||||| || |||||||||||||||| ||| ||||| |||||||||||    
T  44920154 gataaaggaccaaattgttgcctgaaattaagttaagggactaaaaatgtaattttac 44920211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 50710761 - 50710708
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatt 191  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||    
T  50710761 gataaaagaccaaactgttacctgaaattaagttaagggactaaaagtgtaatt 50710708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 53712309 - 53712252
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| ||||||| | |||||| |||||||||||| ||| ||||| |||||||||||    
T  53712309 gataaaggatcaaactgttacctaaaattaagttaagggactaaaactgtaattttac 53712252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 27812827 - 27812883
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttta 194  Q
    |||||| || |||| | ||| ||||||||||||||| ||| ||||||||||||||||    
T  27812827 gataaaggaccaaactgttatctgaaattaagttaagggactaaaagtgtaatttta 27812883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 28843988 - 28844060
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttacttgtattttttatat 210  Q
    |||||| || |||||| ||  ||||||||||||||| ||| ||||||||||||||| | |  |||||||||||    
T  28843988 gataaaggaccaaattgttgtctgaaattaagttaagggactaaaagtgtaattttgccttaattttttatat 28844060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 16530376 - 16530321
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||||| ||||||||||||||||||| ||| |||||||||||||||    
T  16530376 gataaatgaccaaattgttacctgaaattaagttaagggactaaaagtgtaatttt 16530321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 25331872 - 25331818
Alignment:
Q  139 ataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||| ||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  25331872 ataaaggatcaaattgttacctgaaattaagttaagggactaaaagtgtaatttt 25331818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 17688073 - 17688021
Alignment:
Q  143 atgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    ||||||||||| ||||||||||||||||||| | | |||||||||||||||||    
T  17688073 atgatcaaattgttacctgaaattaagttaaggaactaaaagtgtaattttac 17688021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 7067498 - 7067553
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||| | ||||||||||||||||||| ||| |||||||||||||||    
T  7067498 gataaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 7067553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 9902912 - 9902967
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| |||||||||||||||||||    
T  9902912 gataaaggaccaaactgttacctgaaattaagttaagggattaaaagtgtaatttt 9902967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 10993683 - 10993628
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| ||||||||||||||||||| ||| |||||||||||||||    
T  10993683 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaatttt 10993628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 15516364 - 15516309
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||||||| |||||||||||||||    
T  15516364 gataaaggaccaaactattacctgaaattaagttaacggactaaaagtgtaatttt 15516309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 16020015 - 16019960
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||| | ||||||||||||||||||| ||| |||||||||||||||    
T  16020015 gataaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 16019960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 32922125 - 32922070
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  32922125 gataaatgaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 32922070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 35130849 - 35130794
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| |||||||||||||||||||    
T  35130849 gataaaggaccaaactgttacctgaaattaagttaagggattaaaagtgtaatttt 35130794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 35131052 - 35131107
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| |||||||||||||||||||    
T  35131052 gataaaggaccaaactgttacctgaaattaagttaagggattaaaagtgtaatttt 35131107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 39791975 - 39791920
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| ||||||||||||||||||| ||| |||||||||||||||    
T  39791975 gataaaggaccaaattgttacctgaaattaagttaaaggactaaaagtgtaatttt 39791920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 46648279 - 46648334
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||||||||||| | ||||||||||||||||||| ||| ||||| |||||||||    
T  46648279 gataaatgatcaaactgttacctgaaattaagttaagggactaaaaatgtaatttt 46648334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 44835020 - 44834982
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  44835020 ttacctgaaattaagttaagggattaaaagtgtaatttt 44834982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 26843055 - 26843112
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||||    
T  26843055 gataaaggaccaaactgttacctgaaattaagttaaaggactaaaagtgtaattttac 26843112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 39792175 - 39792232
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||||| ||||||||||||||||||| ||| ||||| |||||||||||    
T  39792175 gataaaggaccaaattgttacctgaaattaagttaagggactaaaaatgtaattttac 39792232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 52537937 - 52537880
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||||    
T  52537937 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttac 52537880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 23963034 - 23962950
Alignment:
Q  1 tttattttcttatggcatctcaatcttcataaatctatagtctttcatctttgtttgcacataattattagatttgaaacttgaaatt 88  Q
    |||||||||||||| ||| ||||||||||  ||||||| || |||||||| |||||||| |  | |||||||| ||||||||||||||    
T  23963034 tttattttcttatgacatttcaatcttca--aatctatggt-tttcatctatgtttgcataacaatattagatctgaaacttgaaatt 23962950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 9902711 - 9902656
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  9902711 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 9902656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 20984170 - 20984225
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  20984170 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 20984225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 32922323 - 32922378
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  32922323 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 32922378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 38556000 - 38555945
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||| | ||| ||||||||||||||| ||| |||||||||||||||    
T  38556000 gataaaggatcaaactgttatctgaaattaagttaagggactaaaagtgtaatttt 38555945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 41376642 - 41376587
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  41376642 gataaaggaccaaactattacctgaaattaagttaagggactaaaagtgtaatttt 41376587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 44551171 - 44551226
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  44551171 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 44551226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 45655948 - 45656003
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||| | |||||| |||||||||||| ||| |||||||||||||||    
T  45655948 gataaatgaccaaactgttacctaaaattaagttaagggactaaaagtgtaatttt 45656003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 46648127 - 46648072
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| ||||||||||||||||||| || ||||| ||||||||||    
T  46648127 gataaaggaccaaattgttacctgaaattaagttaaggggttaaaggtgtaatttt 46648072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 52538135 - 52538190
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  52538135 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 52538190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 52653989 - 52653934
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  52653989 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 52653934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 52654188 - 52654243
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  52654188 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 52654243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 54036922 - 54036867
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  54036922 gataaaggaccaaactattacctgaaattaagttaagggactaaaagtgtaatttt 54036867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 10993895 - 10993932
Alignment:
Q  156 tacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  10993895 tacctgaaattaagttaagggattaaaaatgtaatttt 10993932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 9644800 - 9644740
Alignment:
Q  148 caaatttttacctgaaattaagttaacggattaaaagtgtaattttacttgtattttttat 208  Q
    |||||| |||||| |||||||||||| ||| ||||| |||||||||| || | ||||||||    
T  9644800 caaattgttacctaaaattaagttaagggactaaaaatgtaattttaatttttttttttat 9644740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 15516572 - 15516616
Alignment:
Q  149 aaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||| ||||||||||||||||||| |||  ||||||||||||||    
T  15516572 aaattgttacctgaaattaagttaagggacaaaaagtgtaatttt 15516616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 22539944 - 22540011
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttacttgtatttttt 206  Q
    |||||| ||| ||||| |||| |||||||||||||| ||| ||||||||||||||| | | ||||||||    
T  22539944 gataaaggattaaattgttac-tgaaattaagttaagggactaaaagtgtaattttgcctatatttttt 22540011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 23572857 - 23572913
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttta 194  Q
    ||||||||| |||| | || ||| |||||||||||| ||| ||||||||||||||||    
T  23572857 gataaatgaccaaactattgcctaaaattaagttaagggactaaaagtgtaatttta 23572913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 26842841 - 26842801
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    ||||||||||||||||||| | | |||||||||||||||||    
T  26842841 ttacctgaaattaagttaaggaactaaaagtgtaattttac 26842801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 37068736 - 37068688
Alignment:
Q  145 gatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||| | |||||| |||||||||||| ||| |||||||||||||||    
T  37068736 gatcaaactgttacctaaaattaagttaagggactaaaagtgtaatttt 37068688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 45655740 - 45655696
Alignment:
Q  149 aaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||| |||||||||||||||||||  || |||||||||||||||    
T  45655740 aaattgttacctgaaattaagttaagagactaaaagtgtaatttt 45655696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 17191256 - 17191201
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||||| ||||||||||||||||||| ||| |||||||||||||||    
T  17191256 gataaatgaccaaattgttacctgaaattaagttaagggactaaaagtgtaatttt 17191201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 40770396 - 40770453
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  40770396 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttac 40770453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 40934674 - 40934731
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  40934674 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttac 40934731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 5586743 - 5586798
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  5586743 gataaatgaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 5586798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 6488929 - 6488874
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  6488929 gataaatgaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 6488874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 731066 - 731112
Alignment:
Q  149 aaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  731066 aaattattacctgaaattaagttaagggactaaaagtgtaattttac 731112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 17504092 - 17504038
Alignment:
Q  139 ataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||| ||||||| | ||||||||||||||||||| ||| |||||||||||||||    
T  17504092 ataaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 17504038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 44344297 - 44344335
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  44344297 ttacctgaaattaagttaacggactaaaagtgtaatttt 44344335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 8828634 - 8828577
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| ||| ||| | ||||||||||||||||||| ||| |||||||||||||||||    
T  8828634 gataaaggattaaactgttacctgaaattaagttaagggactaaaagtgtaattttac 8828577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 5618129 - 5618061
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttacttgtatttttt 206  Q
    |||||| || |||| | ||||||||||||||||||| ||| ||||||||||||||| | | ||||||||    
T  5618129 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcctatatttttt 5618061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 33471457 - 33471417
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  33471457 ttacctgaaattaagttaagggactaaaagtgtaattttac 33471417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 4695192 - 4695247
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  4695192 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 4695247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 12649980 - 12649925
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  12649980 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 12649925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 12650178 - 12650233
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  12650178 gataaaggaccaaactgttacctgaaattaagttaaaggactaaaagtgtaatttt 12650233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 28554248 - 28554193
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  28554248 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 28554193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 31289312 - 31289257
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  31289312 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 31289257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 34480242 - 34480187
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  34480242 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 34480187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 44344081 - 44344026
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || ||| || ||||||||||||||||||| ||| |||||||||||||||    
T  44344081 gataaaggaccaatttgttacctgaaattaagttaagggactaaaagtgtaatttt 44344026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 45286290 - 45286235
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| |||||||||||||||||||  || |||||||||||||||    
T  45286290 gataaaggaccaaattgttacctgaaattaagttaagagactaaaagtgtaatttt 45286235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 45315314 - 45315260
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| ||||||||||||||||||| ||| |||||||||||||||    
T  45315314 gataaaggaccaaattattacctgaaattaagttaaggga-taaaagtgtaatttt 45315260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 49021922 - 49021977
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||| | ||||||||||||||||||| |||  ||||||||||||||    
T  49021922 gataaatgaccaaactgttacctgaaattaagttaagggacaaaaagtgtaatttt 49021977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 730840 - 730802
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  730840 ttacctgaaattaagttaagggactaaaagtgtaatttt 730802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 8853137 - 8853099
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  8853137 ttacctgaaattaagttaagggactaaaagtgtaatttt 8853099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 8853368 - 8853406
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  8853368 ttacctgaaattaagttaagggactaaaagtgtaatttt 8853406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 25012920 - 25012958
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  25012920 ttacctgaaattaagttaagggactaaaagtgtaatttt 25012958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 26095763 - 26095801
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  26095763 ttacctgaaattaagttaagggactaaaagtgtaatttt 26095801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 39672877 - 39672839
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  39672877 ttacctgaaattaagttaagggactaaaagtgtaatttt 39672839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 8641203 - 8641260
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | |||| |||||||||||||| ||| |||||||||||||||||    
T  8641203 gataaaggaccaaactgttacttgaaattaagttaagggactaaaagtgtaattttac 8641260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 10296650 - 10296593
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | ||||||||||||||||||| ||| ||||||||| |||||||    
T  10296650 gataaaagaccaaactgttacctgaaattaagttaagggactaaaagtgttattttac 10296593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 1501577 - 1501521
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttta 194  Q
    |||||| || |||| | |||| |||||||||||||| ||| ||||||||||||||||    
T  1501577 gataaaggaccaaactgttacttgaaattaagttaagggactaaaagtgtaatttta 1501521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 16515907 - 16515947
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    ||||||||||||||||||| ||| ||||| |||||||||||    
T  16515907 ttacctgaaattaagttaagggactaaaaatgtaattttac 16515947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 29570666 - 29570770
Alignment:
Q  4 attttcttatggcatctcaatcttcataaatctatagtctttcatctttgtttgcacataattattagatttgaaacttgaaattcaaatccatatgcaa 103  Q
    |||||||||| || ||||||||||||  ||||||| |||||||| || |||||||| || | | || |||||||| |||||||     || |||||||||    
T  29570666 attttcttatagcctctcaatcttca--aatctatggtctttcacctatgtttgcatatgaatctttgatttgaagcttgaaa-----atacatatgcaa 29570758  T
Q  104 atggactaaaag 115  Q
    |||||| |||||    
T  29570759 atggaccaaaag 29570770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 30146322 - 30146370
Alignment:
Q  145 gatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||| | ||||||||||||||| ||| ||| |||||||||||||||    
T  30146322 gatcaaactgttacctgaaattaagctaagggactaaaagtgtaatttt 30146370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 48970970 - 48971010
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    ||||||||||||||||||| ||| ||||| |||||||||||    
T  48970970 ttacctgaaattaagttaagggactaaaaatgtaattttac 48971010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 107910 - 107855
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| |||||||||||||||||||    
T  107910 gataaaggaccaaactgttacctgaaattaagttaagggattaaaagtgtaatttt 107855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 8129789 - 8129844
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||| | ||||||||||||||||||| |||||||| ||||||||||    
T  8129789 gataaatgaccaaactgttacctgaaattaagttaagggattaaatgtgtaatttt 8129844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 9220161 - 9220106
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||| | ||||||||||||||||||| ||| |||||||||||||||    
T  9220161 gataaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 9220106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 9546667 - 9546722
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||| | ||||||||||||||||||| ||| |||||||||||||||    
T  9546667 gataaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 9546722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 24325249 - 24325304
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| |||||||||||||||||||    
T  24325249 gataaaggaccaaactgttacctgaaattaagttaagggattaaaagtgtaatttt 24325304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 685011 - 684954
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||||| ||| ||||||||||||||| ||| |||||||||||||||||    
T  685011 gataaaggaccaaattgttatctgaaattaagttaagggactaaaagtgtaattttac 684954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 24325040 - 24324995
Alignment:
Q  148 caaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||    
T  24325040 caaattgttacctgaaattaagttaaaggactaaaagtgtaatttt 24324995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 1925159 - 1925119
Alignment:
Q  153 ttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  1925159 ttttacctgaaattaagttaagggactaaaagtgtaatttt 1925119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 2316745 - 2316800
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  2316745 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 2316800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 9220359 - 9220414
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | |||||||||||||||||||  ||||||||||||||||||    
T  9220359 gataaaagaccaaactcttacctgaaattaagttaagagattaaaagtgtaatttt 9220414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 9899253 - 9899198
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  9899253 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 9899198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 9899451 - 9899506
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  9899451 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 9899506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 13853200 - 13853145
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||| |||||| ||||||||||||||||||| ||| ||||| | |||||||    
T  13853200 gataaatgaccaaattgttacctgaaattaagttaagggactaaaaatataatttt 13853145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 25121753 - 25121808
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||| | ||||||||||||||||||| ||| |||||||||||||||    
T  25121753 gataaaggaccaaactgttacctgaaattaagttaaaggactaaaagtgtaatttt 25121808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 1925424 - 1925462
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  1925424 ttacctgaaattaagttaagggactaaaagtgtaatttt 1925462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 21926105 - 21926067
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  21926105 ttacctgaaattaagttaagggactaaaagtgtaatttt 21926067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 22569019 - 22569076
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||| || |||| | |||||| |||||||||||| ||| |||||||||||||||||    
T  22569019 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttac 22569076  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 685226 - 685266
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaattttac 195  Q
    |||||||||||||||||||  || |||||||||||||||||    
T  685226 ttacctgaaattaagttaagagactaaaagtgtaattttac 685266  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 17853899 - 17853967
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaattttacttgtatttttt 206  Q
    |||||| || |||| | ||| ||||||||||||||| ||| ||||||||||||||| | | ||||||||    
T  17853899 gataaaggaccaaactgttatctgaaattaagttaagggactaaaagtgtaattttgcctatatttttt 17853967  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 257739 - 257695
Alignment:
Q  149 aaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||| |||||||||||||||| || |||||||||||||||||||    
T  257739 aaattgttacctgaaattaagtcaatggattaaaagtgtaatttt 257695  T

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Target: scaffold0077 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 10175 - 10230
Alignment:
Q  138 gataaatgatcaaatttttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    |||||| || |||||| ||| ||||||||||||||| ||||||||||| |||||||    
T  10175 gataaaggaccaaattgttatctgaaattaagttaagggattaaaagtataatttt 10230  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 258796 - 258758
Alignment:
Q  155 ttacctgaaattaagttaacggattaaaagtgtaatttt 193  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  258796 ttacctgaaattaagttaagggattaaaagtataatttt 258758  T

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