View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15115_high_8 (Length: 302)
Name: NF15115_high_8
Description: NF15115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15115_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 17 - 286
Target Start/End: Complemental strand, 45743649 - 45743380
Alignment:
| Q |
17 |
aatatgaatacaactaaaaccaggaatctttgtttttgcaggctgttaatgcgaatgatagcagcatgttgattctgcaagaaacttggatggatacatc |
116 |
Q |
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| T |
45743649 |
aatatgaatacaactaaaaccaggaatctttgtttttgcaggctgttaatgcgaatgatagcagcatgttgattctgcaagaaacttggatggatacatc |
45743550 |
T |
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| Q |
117 |
ttgctcagtggtggtgtatgcaccagttgacgggcaatcattgaatgtggtgatgagtggtggagattctgcatatgttgcactcctgccttcaggcttt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45743549 |
ttgctcagtggtggtgtatgcaccagttgacgggcaatcattgaatgtggtgatgagtggtggagattctgcatatgttgcactcctgccttcaggcttt |
45743450 |
T |
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| Q |
217 |
gccattgttcctgatggcaatgatccctctggctatggcatgtcaaatggtacattacagaaaggtggtg |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45743449 |
gccattgttcctgatggcaatgatccctctggctatggcatgtcaaatggtacattacagaaaggtggtg |
45743380 |
T |
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