View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15115_low_12 (Length: 244)
Name: NF15115_low_12
Description: NF15115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15115_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 37071726 - 37071963
Alignment:
| Q |
1 |
gtcaactatacatttgacataactatcaacattgctacatttggtaattatttgaccaattcaagaacctgtttgtctgatcttatgatctcacaacatt |
100 |
Q |
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| T |
37071726 |
gtcaactatacatttgacataactatcaacattgctacatttggtaattatttgaccaattcaagaaccggtttgtctgatcttatgatctcacaacatt |
37071825 |
T |
|
| Q |
101 |
gatactattggtaattattttgccattcaatcaagtaataacttaacatagaaggttgtttgagtcttgctttacaacaccaatgctcctcctttccatg |
200 |
Q |
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| T |
37071826 |
gatactattggtaattattttgccattcaat----taataacttaacatagaaggttgtttgagtcttgctttacaacaccaatgctcctcctttccatg |
37071921 |
T |
|
| Q |
201 |
gtttacagcaaaatccgacctgtctatgatgaaatcctatga |
242 |
Q |
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| T |
37071922 |
gtttacagcaaaatccgacctgtctataatgaaagcctatga |
37071963 |
T |
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