View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15115_low_7 (Length: 309)
Name: NF15115_low_7
Description: NF15115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15115_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 4224422 - 4224131
Alignment:
| Q |
1 |
cccctaacccataaacatcattttccttacaaactctaccacccctaattccttcattccaatattcatcatccacataaccaactaaccctctcttttc |
100 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4224422 |
cccctaacccataaacatcattttccttacaaacactaccacccctaattccttcattccaatattcatcatccacataaccaactaaccctctcttttc |
4224323 |
T |
|
| Q |
101 |
tacaccccccaaaaaactaagtccataatcagatattttagcacaaaaattaacatcaataagaacattagaagatttaacacaaccatgtacaatattt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4224322 |
tacaccccccaaaaaactaagtccataatcagatattttagcacaaaaattaacatcaataagaacattagaagatttaacacaaccatgtacaatattt |
4224223 |
T |
|
| Q |
201 |
ggtgctaccacttcatgaagatattgtagccctttagctactccagctgcaatcttaaacctcttgttccaatccaaaagtgaagaagaacc |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4224222 |
ggtgctaccacttcatgaagatattgtagccctttagctactccagctgcaatcttaaacctcttgttccaatccaaaagtgaagaagaacc |
4224131 |
T |
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