View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15119_low_2 (Length: 206)
Name: NF15119_low_2
Description: NF15119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15119_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 19 - 196
Target Start/End: Complemental strand, 505528 - 505351
Alignment:
| Q |
19 |
cattcagcataccttaatttccctgaattggtacaacaacttccaaagccaataagtacttctacaaaagacattcaagctgctgctgcaaaagctgcaa |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
505528 |
cattcagcataccttaatttccctgaattggtacaacaacttccaaagccaataagtacttctacaaaagacattcaagctgctgctgcaaaagctgcaa |
505429 |
T |
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| Q |
119 |
acactgtatttgtagctgaaccaagacaagaagaacatttctcatcttcaacttcaacatttaccactaatgatgatg |
196 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||| |
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| T |
505428 |
acactgtatttgtagctgaaccaatacaagaagaacatttctcatcttcaagttcaacatttaccaataatgatgatg |
505351 |
T |
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