View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1511_high_147 (Length: 248)
Name: NF1511_high_147
Description: NF1511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1511_high_147 |
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Alignment Details
Target: chr5 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 2631594 - 2631402
Alignment:
| Q |
20 |
caacggggccatatttgttacttgtagagtaggacttcacgattttgttcaagatatatcacacttaattagttgtatcagaataagttaatgattttca |
119 |
Q |
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| T |
2631594 |
caacggggccatatttgttacttgtagagttggacttcacgattttgttcaagatatatcacacttaattagttgtatcagaataagttaatgattttga |
2631495 |
T |
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| Q |
120 |
attacaatgatagattagtcgattaagtggttgtgtgaattattaaatttat--------taatgcatatttaatcaattcacataatcgatc |
204 |
Q |
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| T |
2631494 |
attacaatgatagattagtcgattaagtggttgtgtgaattattaaatttattaattgattaatgcatatttaatcaattcacataatcgatc |
2631402 |
T |
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