View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1511_high_30 (Length: 456)

Name: NF1511_high_30
Description: NF1511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1511_high_30
NF1511_high_30
[»] chr7 (45 HSPs)
chr7 (65-446)||(38885400-38885782)
chr7 (13-64)||(9698538-9698589)
chr7 (19-64)||(3872187-3872232)
chr7 (19-64)||(3904478-3904523)
chr7 (19-64)||(18217923-18217968)
chr7 (19-64)||(22486488-22486533)
chr7 (19-64)||(23539326-23539371)
chr7 (21-64)||(6849211-6849254)
chr7 (19-64)||(1842988-1843033)
chr7 (19-64)||(1907449-1907494)
chr7 (19-64)||(7733312-7733357)
chr7 (19-64)||(11036601-11036646)
chr7 (19-64)||(21917334-21917379)
chr7 (19-64)||(23232133-23232178)
chr7 (19-64)||(23699825-23699870)
chr7 (19-64)||(23750736-23750781)
chr7 (19-64)||(27806112-27806157)
chr7 (19-64)||(28800972-28801017)
chr7 (19-64)||(31425511-31425556)
chr7 (19-66)||(47523648-47523695)
chr7 (19-64)||(2093362-2093407)
chr7 (19-64)||(15014405-15014450)
chr7 (19-64)||(20174114-20174159)
chr7 (19-64)||(20429559-20429604)
chr7 (19-64)||(21623115-21623159)
chr7 (19-64)||(24605932-24605977)
chr7 (19-64)||(37135285-37135330)
chr7 (19-64)||(48933230-48933275)
chr7 (31-67)||(687972-688008)
chr7 (24-64)||(33427788-33427828)
chr7 (19-64)||(1824200-1824245)
chr7 (19-64)||(2650828-2650873)
chr7 (19-64)||(4514859-4514904)
chr7 (19-64)||(23577189-23577234)
chr7 (19-64)||(42926419-42926464)
chr7 (19-62)||(32267440-32267483)
chr7 (19-65)||(20923957-20924003)
chr7 (19-65)||(38090357-38090403)
chr7 (19-64)||(816191-816236)
chr7 (19-60)||(2457762-2457803)
chr7 (19-64)||(15969879-15969924)
chr7 (19-64)||(21871662-21871707)
chr7 (19-64)||(36993914-36993959)
chr7 (19-64)||(39979624-39979669)
chr7 (19-63)||(27132722-27132766)
[»] chr8 (54 HSPs)
chr8 (19-66)||(24576022-24576069)
chr8 (19-65)||(4331070-4331116)
chr8 (19-65)||(11938836-11938882)
chr8 (19-64)||(8555304-8555349)
chr8 (19-64)||(19240959-19241004)
chr8 (19-64)||(19314143-19314188)
chr8 (19-64)||(19488061-19488106)
chr8 (19-64)||(24193196-24193241)
chr8 (19-64)||(25274689-25274734)
chr8 (19-64)||(27910764-27910809)
chr8 (19-64)||(27957183-27957228)
chr8 (19-64)||(30466954-30466999)
chr8 (19-66)||(25655856-25655903)
chr8 (19-64)||(3823225-3823270)
chr8 (19-64)||(4647755-4647800)
chr8 (19-64)||(8824917-8824962)
chr8 (19-64)||(16061939-16061984)
chr8 (19-64)||(17810390-17810435)
chr8 (19-64)||(19256304-19256349)
chr8 (19-64)||(27869330-27869375)
chr8 (19-64)||(32248001-32248046)
chr8 (19-64)||(33652659-33652704)
chr8 (24-64)||(29351021-29351061)
chr8 (19-62)||(9915043-9915086)
chr8 (19-66)||(25000429-25000476)
chr8 (19-65)||(43431558-43431604)
chr8 (19-64)||(9631496-9631541)
chr8 (19-64)||(10917919-10917964)
chr8 (19-64)||(13060931-13060976)
chr8 (19-64)||(15251693-15251738)
chr8 (19-64)||(17824616-17824661)
chr8 (19-64)||(18010060-18010105)
chr8 (19-64)||(21350570-21350615)
chr8 (19-64)||(22939405-22939450)
chr8 (19-64)||(23752286-23752331)
chr8 (23-64)||(25273328-25273369)
chr8 (19-64)||(29345163-29345208)
chr8 (19-64)||(30688028-30688073)
chr8 (19-57)||(14304321-14304359)
chr8 (19-64)||(24636744-24636790)
chr8 (19-64)||(6817146-6817191)
chr8 (19-64)||(21219240-21219285)
chr8 (19-64)||(32961751-32961796)
chr8 (19-64)||(33412977-33413021)
chr8 (19-64)||(40289421-40289466)
chr8 (19-64)||(42700657-42700702)
chr8 (25-64)||(6816383-6816422)
chr8 (25-64)||(31399508-31399547)
chr8 (19-62)||(37992191-37992234)
chr8 (26-64)||(17003361-17003399)
chr8 (19-64)||(5670169-5670214)
chr8 (19-64)||(6084246-6084291)
chr8 (19-64)||(17103865-17103910)
chr8 (19-64)||(24479813-24479858)
[»] chr4 (47 HSPs)
chr4 (13-64)||(13564915-13564966)
chr4 (19-65)||(22168360-22168406)
chr4 (19-64)||(4586758-4586803)
chr4 (19-64)||(7111946-7111991)
chr4 (19-64)||(19839271-19839316)
chr4 (19-64)||(27040025-27040070)
chr4 (19-64)||(55309212-55309257)
chr4 (22-64)||(5473944-5473986)
chr4 (19-64)||(9238625-9238670)
chr4 (19-64)||(9670479-9670524)
chr4 (19-64)||(30268988-30269033)
chr4 (19-64)||(30283156-30283201)
chr4 (19-64)||(32175737-32175782)
chr4 (19-64)||(38619939-38619984)
chr4 (19-64)||(38645842-38645887)
chr4 (19-64)||(44783575-44783620)
chr4 (19-64)||(45091353-45091398)
chr4 (19-63)||(4627079-4627123)
chr4 (19-65)||(18714994-18715040)
chr4 (19-65)||(30420032-30420078)
chr4 (19-64)||(13028816-13028861)
chr4 (19-64)||(45532579-45532624)
chr4 (19-64)||(46286229-46286274)
chr4 (19-64)||(54539378-54539423)
chr4 (19-64)||(2275677-2275723)
chr4 (19-57)||(18051931-18051969)
chr4 (19-64)||(1638539-1638584)
chr4 (19-64)||(8878975-8879020)
chr4 (19-64)||(19680424-19680469)
chr4 (19-64)||(22128312-22128357)
chr4 (19-64)||(25026649-25026694)
chr4 (19-64)||(29625417-29625462)
chr4 (19-64)||(33914151-33914196)
chr4 (31-64)||(42055501-42055534)
chr4 (19-63)||(24682328-24682372)
chr4 (19-59)||(37378628-37378668)
chr4 (21-64)||(4606829-4606872)
chr4 (25-64)||(12072060-12072099)
chr4 (19-65)||(9913350-9913396)
chr4 (19-57)||(30568006-30568044)
chr4 (19-64)||(9058952-9058997)
chr4 (19-64)||(9239281-9239326)
chr4 (19-64)||(12106074-12106119)
chr4 (19-64)||(16915461-16915506)
chr4 (19-64)||(25225189-25225234)
chr4 (31-64)||(30508091-30508124)
chr4 (19-64)||(36689769-36689814)
[»] chr2 (39 HSPs)
chr2 (19-66)||(12779690-12779737)
chr2 (19-64)||(20065074-20065119)
chr2 (19-64)||(37552317-37552362)
chr2 (19-64)||(41736262-41736307)
chr2 (19-64)||(44476375-44476420)
chr2 (19-65)||(7093658-7093704)
chr2 (22-64)||(23857958-23858000)
chr2 (19-64)||(13788055-13788100)
chr2 (19-64)||(15636735-15636780)
chr2 (19-64)||(21293711-21293756)
chr2 (19-64)||(22140364-22140409)
chr2 (19-64)||(27039908-27039953)
chr2 (19-64)||(32009043-32009088)
chr2 (19-64)||(32185922-32185967)
chr2 (19-64)||(43408511-43408556)
chr2 (19-63)||(28319580-28319624)
chr2 (19-57)||(1141626-1141664)
chr2 (19-57)||(32300541-32300579)
chr2 (19-64)||(8430386-8430431)
chr2 (19-64)||(18551253-18551298)
chr2 (19-64)||(28841342-28841387)
chr2 (19-64)||(41637708-41637753)
chr2 (19-64)||(44723022-44723067)
chr2 (19-63)||(23388379-23388423)
chr2 (26-64)||(26243321-26243359)
chr2 (19-64)||(14757121-14757166)
chr2 (19-64)||(22192269-22192314)
chr2 (19-64)||(29749403-29749448)
chr2 (19-64)||(36550925-36550970)
chr2 (19-64)||(37723992-37724037)
chr2 (19-59)||(38362276-38362316)
chr2 (19-58)||(12860235-12860274)
chr2 (19-61)||(28262454-28262496)
chr2 (23-64)||(13613093-13613134)
chr2 (27-64)||(16098917-16098954)
chr2 (19-64)||(26687690-26687735)
chr2 (19-64)||(27327706-27327751)
chr2 (19-64)||(30783428-30783473)
chr2 (19-64)||(40018892-40018937)
[»] scaffold0001 (3 HSPs)
scaffold0001 (19-69)||(84397-84447)
scaffold0001 (19-64)||(8110-8155)
scaffold0001 (19-64)||(21842-21887)
[»] chr6 (54 HSPs)
chr6 (19-73)||(6598558-6598612)
chr6 (19-65)||(15448479-15448525)
chr6 (19-64)||(6605496-6605541)
chr6 (19-64)||(9893057-9893102)
chr6 (19-64)||(24661009-24661054)
chr6 (19-64)||(26224522-26224567)
chr6 (19-64)||(28365005-28365050)
chr6 (19-64)||(30833960-30834005)
chr6 (19-63)||(5360503-5360547)
chr6 (19-69)||(15961402-15961452)
chr6 (19-64)||(495627-495672)
chr6 (19-64)||(1939242-1939287)
chr6 (19-64)||(15364458-15364503)
chr6 (19-64)||(16250802-16250847)
chr6 (19-64)||(20182239-20182284)
chr6 (19-64)||(21990175-21990220)
chr6 (19-64)||(22153707-22153752)
chr6 (19-64)||(22579349-22579394)
chr6 (23-63)||(27796835-27796875)
chr6 (23-66)||(2669407-2669450)
chr6 (19-65)||(15509250-15509296)
chr6 (19-61)||(21141033-21141075)
chr6 (19-61)||(25398096-25398138)
chr6 (19-64)||(5250233-5250278)
chr6 (19-64)||(9885337-9885382)
chr6 (19-64)||(11049751-11049796)
chr6 (23-64)||(12160847-12160888)
chr6 (19-64)||(12200788-12200833)
chr6 (19-64)||(28668194-28668239)
chr6 (19-63)||(10458858-10458902)
chr6 (25-64)||(33191180-33191219)
chr6 (19-65)||(12951802-12951848)
chr6 (18-64)||(14036705-14036751)
chr6 (19-64)||(2992709-2992754)
chr6 (19-64)||(6978371-6978416)
chr6 (19-64)||(8844168-8844213)
chr6 (19-60)||(12157380-12157421)
chr6 (19-64)||(18033526-18033571)
chr6 (19-64)||(18492463-18492508)
chr6 (19-64)||(22083932-22083977)
chr6 (19-64)||(33250708-33250753)
chr6 (19-58)||(5192195-5192234)
chr6 (19-61)||(11077743-11077785)
chr6 (19-61)||(11350273-11350315)
chr6 (19-64)||(12499310-12499356)
chr6 (19-64)||(12506639-12506685)
chr6 (19-64)||(12509545-12509591)
chr6 (19-64)||(11530319-11530364)
chr6 (19-64)||(12351586-12351631)
chr6 (23-64)||(13251379-13251420)
chr6 (19-64)||(14886655-14886700)
chr6 (19-64)||(17919630-17919675)
chr6 (19-64)||(18048882-18048927)
chr6 (24-64)||(26939686-26939726)
[»] chr5 (41 HSPs)
chr5 (19-65)||(36196488-36196534)
chr5 (19-64)||(12045821-12045866)
chr5 (19-64)||(16121839-16121884)
chr5 (19-64)||(38837671-38837716)
chr5 (19-66)||(7888891-7888938)
chr5 (13-64)||(40484132-40484183)
chr5 (19-65)||(5982740-5982786)
chr5 (19-65)||(16631873-16631919)
chr5 (19-64)||(618388-618433)
chr5 (19-64)||(746868-746913)
chr5 (19-64)||(4125188-4125233)
chr5 (19-64)||(7003730-7003775)
chr5 (19-64)||(8108860-8108905)
chr5 (19-64)||(35620344-35620389)
chr5 (20-64)||(29727895-29727939)
chr5 (19-66)||(36716198-36716245)
chr5 (19-65)||(2472713-2472759)
chr5 (23-65)||(13974077-13974119)
chr5 (19-64)||(10494831-10494876)
chr5 (19-64)||(12328226-12328271)
chr5 (19-64)||(15061067-15061112)
chr5 (19-64)||(17039631-17039676)
chr5 (19-64)||(23409075-23409120)
chr5 (19-64)||(26708585-26708630)
chr5 (19-64)||(26978319-26978364)
chr5 (19-64)||(28265475-28265520)
chr5 (19-63)||(17771969-17772013)
chr5 (19-55)||(23975729-23975765)
chr5 (23-66)||(8886849-8886892)
chr5 (18-65)||(16464722-16464769)
chr5 (25-64)||(19890986-19891025)
chr5 (19-64)||(13620127-13620172)
chr5 (19-64)||(20187941-20187986)
chr5 (19-64)||(24138841-24138886)
chr5 (19-64)||(25397788-25397833)
chr5 (19-64)||(25652583-25652628)
chr5 (19-64)||(33818561-33818606)
chr5 (23-64)||(36831890-36831931)
chr5 (19-64)||(10420252-10420297)
chr5 (19-64)||(17986823-17986868)
chr5 (20-64)||(17036412-17036456)
[»] chr3 (70 HSPs)
chr3 (19-64)||(27449178-27449223)
chr3 (19-64)||(43329763-43329808)
chr3 (19-64)||(48404950-48404995)
chr3 (19-63)||(11915848-11915892)
chr3 (19-65)||(1745487-1745533)
chr3 (19-65)||(21816811-21816857)
chr3 (19-64)||(5261027-5261072)
chr3 (19-64)||(8110429-8110474)
chr3 (19-64)||(9652668-9652713)
chr3 (19-64)||(11219228-11219273)
chr3 (19-64)||(13921415-13921460)
chr3 (19-64)||(18091547-18091592)
chr3 (19-64)||(18104530-18104575)
chr3 (19-64)||(19223539-19223584)
chr3 (19-64)||(19269864-19269909)
chr3 (19-64)||(25882660-25882705)
chr3 (19-64)||(26098903-26098948)
chr3 (19-64)||(26390634-26390679)
chr3 (19-64)||(29236134-29236179)
chr3 (19-65)||(10941664-10941710)
chr3 (19-65)||(17762732-17762778)
chr3 (19-65)||(19064052-19064098)
chr3 (19-64)||(1310959-1311004)
chr3 (19-64)||(3461310-3461355)
chr3 (19-64)||(5565812-5565857)
chr3 (19-64)||(7623531-7623576)
chr3 (19-64)||(8428261-8428306)
chr3 (19-64)||(8546335-8546380)
chr3 (19-64)||(11007683-11007728)
chr3 (21-62)||(11386427-11386468)
chr3 (19-64)||(13905038-13905083)
chr3 (19-64)||(18380114-18380159)
chr3 (19-64)||(20761950-20761995)
chr3 (19-64)||(21020155-21020200)
chr3 (19-64)||(29956462-29956507)
chr3 (19-64)||(30005617-30005662)
chr3 (19-55)||(29704041-29704077)
chr3 (19-66)||(18539894-18539941)
chr3 (20-63)||(27969006-27969049)
chr3 (19-57)||(4393357-4393395)
chr3 (19-65)||(8543558-8543604)
chr3 (19-64)||(6088228-6088273)
chr3 (19-64)||(6447246-6447291)
chr3 (19-64)||(10772053-10772098)
chr3 (19-64)||(10803811-10803856)
chr3 (19-64)||(11837214-11837259)
chr3 (19-64)||(15063992-15064037)
chr3 (19-64)||(19610428-19610473)
chr3 (19-64)||(30219428-30219473)
chr3 (19-64)||(46012728-46012773)
chr3 (19-67)||(16299951-16299999)
chr3 (20-64)||(23773568-23773612)
chr3 (29-64)||(17269604-17269639)
chr3 (19-64)||(29451184-29451230)
chr3 (19-64)||(5744506-5744551)
chr3 (19-64)||(5781465-5781510)
chr3 (19-64)||(11085342-11085387)
chr3 (19-64)||(15501551-15501596)
chr3 (19-64)||(21088840-21088885)
chr3 (19-64)||(21490034-21490079)
chr3 (19-64)||(31250178-31250223)
chr3 (19-64)||(36543839-36543884)
chr3 (19-64)||(36564439-36564484)
chr3 (19-64)||(37283613-37283658)
chr3 (19-64)||(46942577-46942622)
chr3 (19-64)||(47263265-47263310)
chr3 (28-64)||(20088504-20088540)
chr3 (23-59)||(26963254-26963290)
chr3 (24-64)||(27182658-27182698)
chr3 (19-59)||(40287486-40287526)
[»] chr1 (51 HSPs)
chr1 (19-64)||(8940994-8941039)
chr1 (19-64)||(9109975-9110020)
chr1 (19-64)||(12369951-12369996)
chr1 (19-64)||(12720903-12720948)
chr1 (19-64)||(28229455-28229500)
chr1 (19-64)||(46790094-46790139)
chr1 (19-65)||(45839386-45839432)
chr1 (19-64)||(6412053-6412098)
chr1 (19-64)||(6459311-6459356)
chr1 (19-64)||(7181555-7181600)
chr1 (19-64)||(20408160-20408205)
chr1 (23-64)||(29549516-29549557)
chr1 (19-64)||(46339445-46339490)
chr1 (19-64)||(50092298-50092343)
chr1 (19-64)||(51973518-51973563)
chr1 (19-63)||(25787998-25788042)
chr1 (19-58)||(46785964-46786003)
chr1 (19-65)||(22603642-22603688)
chr1 (19-64)||(4340501-4340546)
chr1 (19-64)||(9177194-9177239)
chr1 (19-64)||(9985327-9985372)
chr1 (19-64)||(17200010-17200055)
chr1 (19-64)||(19865338-19865383)
chr1 (19-64)||(20290321-20290366)
chr1 (19-64)||(41120737-41120782)
chr1 (19-64)||(41752527-41752572)
chr1 (19-64)||(48522612-48522657)
chr1 (19-64)||(50845330-50845375)
chr1 (19-64)||(52183772-52183817)
chr1 (19-57)||(18890556-18890594)
chr1 (19-64)||(12161908-12161953)
chr1 (19-64)||(14760961-14761006)
chr1 (19-64)||(15243179-15243224)
chr1 (19-64)||(17661144-17661189)
chr1 (23-64)||(18894900-18894941)
chr1 (19-64)||(22158896-22158941)
chr1 (19-64)||(23457991-23458036)
chr1 (19-64)||(38531170-38531215)
chr1 (19-64)||(46865337-46865382)
chr1 (19-63)||(9259184-9259228)
chr1 (19-54)||(30928388-30928423)
chr1 (19-65)||(19081822-19081868)
chr1 (19-65)||(19129710-19129756)
chr1 (19-65)||(20581004-20581050)
chr1 (19-64)||(12989946-12989991)
chr1 (19-64)||(13102410-13102455)
chr1 (19-64)||(13195677-13195722)
chr1 (19-60)||(16913581-16913622)
chr1 (23-64)||(18787913-18787954)
chr1 (19-64)||(27253855-27253900)
chr1 (19-64)||(39749027-39749072)
[»] scaffold0599 (1 HSPs)
scaffold0599 (19-63)||(7599-7643)
[»] scaffold0009 (3 HSPs)
scaffold0009 (19-70)||(219730-219781)
scaffold0009 (19-63)||(182624-182668)
scaffold0009 (19-64)||(215663-215708)
[»] scaffold0603 (1 HSPs)
scaffold0603 (19-65)||(5978-6024)
[»] scaffold0011 (1 HSPs)
scaffold0011 (19-65)||(17616-17662)
[»] scaffold0717 (1 HSPs)
scaffold0717 (19-64)||(918-963)
[»] scaffold0576 (1 HSPs)
scaffold0576 (19-64)||(9229-9274)
[»] scaffold0240 (1 HSPs)
scaffold0240 (19-64)||(14990-15035)
[»] scaffold0219 (1 HSPs)
scaffold0219 (19-64)||(19697-19742)
[»] scaffold0128 (1 HSPs)
scaffold0128 (19-64)||(10663-10708)
[»] scaffold0108 (1 HSPs)
scaffold0108 (19-64)||(12746-12791)
[»] scaffold0023 (1 HSPs)
scaffold0023 (19-64)||(39703-39748)
[»] scaffold0014 (1 HSPs)
scaffold0014 (23-64)||(22309-22350)
[»] scaffold0007 (3 HSPs)
scaffold0007 (19-64)||(3836-3881)
scaffold0007 (19-64)||(202868-202913)
scaffold0007 (19-64)||(274665-274710)
[»] scaffold0161 (1 HSPs)
scaffold0161 (19-61)||(6889-6931)
[»] scaffold0554 (1 HSPs)
scaffold0554 (19-64)||(9904-9949)
[»] scaffold0076 (1 HSPs)
scaffold0076 (19-64)||(26577-26622)
[»] scaffold0062 (1 HSPs)
scaffold0062 (19-64)||(44011-44056)
[»] scaffold0035 (1 HSPs)
scaffold0035 (19-61)||(74720-74762)
[»] scaffold0655 (1 HSPs)
scaffold0655 (19-64)||(3162-3207)
[»] scaffold0087 (1 HSPs)
scaffold0087 (19-64)||(37787-37832)
[»] scaffold0047 (1 HSPs)
scaffold0047 (19-64)||(58676-58721)
[»] scaffold0019 (1 HSPs)
scaffold0019 (19-64)||(173540-173584)
[»] scaffold0006 (1 HSPs)
scaffold0006 (19-60)||(84678-84719)
[»] scaffold0184 (1 HSPs)
scaffold0184 (19-61)||(7550-7592)
[»] scaffold0069 (1 HSPs)
scaffold0069 (19-64)||(10252-10297)
[»] scaffold0002 (1 HSPs)
scaffold0002 (19-64)||(440057-440102)


Alignment Details
Target: chr7 (Bit Score: 371; Significance: 0; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 65 - 446
Target Start/End: Original strand, 38885400 - 38885782
Alignment:
Q  65 gatttaggttttgtttatgtagtataatgctattgtagtctagtagtagtaccttacatttggtaggggagcacttaagctttttccttcctctcttcaa 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38885400 gatttaggttttgtttatgtagtataatgctattgtagtctagtagtagtaccttacatttggtaggggagcacttaagctttttccttcctctcttcaa 38885499  T
Q  165 atctttctgtcaaattttgcgggaacattatcaaa-gaggaacttaggaaccattagttctgccaataatggcaaatgctttagtgtaaccatttgagtg 263  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38885500 atctttctgtcaaattttgccggaacattatcaaaagaggaacttaggaaccattagttctgccaataatggcaaatgctttagtgtaaccatttgagtg 38885599  T
Q  264 tagagtatttgctatttcaataagcagttttgctaaatgacttaattttttatgcttgctttatttaacttatttactccttgttgtttcaatatttctt 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38885600 tagagtatttgctatttcaataagcagttttgctaaatgacttaattttttatgcttgctttatttaacttatttactccttgttgtttcaatatttctt 38885699  T
Q  364 tttctgaggtctccaaggaaaacactagtgtcagggaatttgtgtgattgaaattgaaatactcaagaaaaaattactctgtg 446  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38885700 tttctgaggtctccaaggaaaacactagtgtcagggaatttgtgtgattgaaattgaaatactcaagaaaaaattactctgtg 38885782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 9698589 - 9698538
Alignment:
Q  13 tcatcatttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9698589 tcattatttccgtcactaatttccctcgctaattttgctttttctagtagtg 9698538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 3872232 - 3872187
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3872232 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 3872187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 3904523 - 3904478
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3904523 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 3904478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 18217923 - 18217968
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18217923 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 18217968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 22486488 - 22486533
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22486488 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 22486533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 23539326 - 23539371
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23539326 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 23539371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 6849254 - 6849211
Alignment:
Q  21 tccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  6849254 tccgtcactaatttccctcgctaattttgctttttctagtagtg 6849211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 1842988 - 1843033
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  1842988 tttccgtcactaatttccctcgttaattttgctttttctagtagtg 1843033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 1907449 - 1907494
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  1907449 tttccgtcactaatttccctcgctaattttgcttttcctagtagtg 1907494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 7733357 - 7733312
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  7733357 tttccgtcactaatttccctcgctaatttcgctttttctagtagtg 7733312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 11036601 - 11036646
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  11036601 tttccgtcactaatttcccttgctaattttgctttttctagtagtg 11036646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 21917379 - 21917334
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  21917379 tttccgtcactaatttccctcactaattttgctttttctagtagtg 21917334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 23232133 - 23232178
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  23232133 tttccgtcactaatttccctctctaattttgctttttctagtagtg 23232178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 23699870 - 23699825
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  23699870 tttccgtcactaatttccctcgctaatttttctttttctagtagtg 23699825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 23750781 - 23750736
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  23750781 tttccgtcactaatttccctcgctaattttgttttttctagtagtg 23750736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 27806112 - 27806157
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  27806112 tttccgtcactaattttcctcgctaattttgctttttctagtagtg 27806157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 28800972 - 28801017
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  28800972 tttctgtcactaatttccctcgctaattttgctttttctagtagtg 28801017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 31425556 - 31425511
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  31425556 tttccgtcactaatttccctcgctaattttgctttttctaatagtg 31425511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 47523695 - 47523648
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgga 66  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  47523695 tttccgtcactaatttccctcgctaattttattttttctagtagtgga 47523648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 2093407 - 2093362
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  2093407 tttccgtcactaatttccctcgctgatttttctttttctagtagtg 2093362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 15014450 - 15014405
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||    
T  15014450 tttccgtcaccaatttccctcgctaattttactttttctagtagtg 15014405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 20174114 - 20174159
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||||| || ||||||    
T  20174114 tttccgtcactaatttccctcgctaattttgcttttcctggtagtg 20174159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 20429559 - 20429604
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||| | |||||||||||||||||||||||    
T  20429559 tttccgtcactaatttcccttgttaattttgctttttctagtagtg 20429604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 21623115 - 21623159
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  21623115 tttccgtcactaatttccctcgct-attttgctttttctagtagtg 21623159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 24605932 - 24605977
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  24605932 tttccgtcactaatttccctcgctgatttttctttttctagtagtg 24605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 37135330 - 37135285
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  37135330 tttccgtcactaatttccctcactaattttgttttttctagtagtg 37135285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 48933230 - 48933275
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||    
T  48933230 tttccgtcactaattttcctcgctaattttgctttttctaatagtg 48933275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 687972 - 688008
Alignment:
Q  31 atttccctcgctaattttgctttttctagtagtggat 67  Q
    |||||||||||||||||||||||||||||||||||||    
T  687972 atttccctcgctaattttgctttttctagtagtggat 688008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 33427788 - 33427828
Alignment:
Q  24 gtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  33427788 gtcactaatttccctcgctaattttgttttttctagtagtg 33427828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 1824245 - 1824200
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||    
T  1824245 tttccgtcacaaatttccctccctaattttgcttttcctagtagtg 1824200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 2650873 - 2650828
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||||    
T  2650873 tttccgtcactaaattccctcactaatttttctttttctagtagtg 2650828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 4514859 - 4514904
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||    
T  4514859 tttccgtcacaaatttccctccctaattttgcttttcctagtagtg 4514904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 23577234 - 23577189
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||    
T  23577234 tttccgtcactaatttctctcgctgatttttctttttctagtagtg 23577189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 42926464 - 42926419
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||    
T  42926464 tttccgtcactaattttcctcgctaattttattttttctagtagtg 42926419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 32267440 - 32267483
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtag 62  Q
    |||||||||||||| |||||| |||||||||| |||||||||||    
T  32267440 tttccgtcactaatctccctccctaattttgcattttctagtag 32267483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 20924003 - 20923957
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    ||||| |||||||||||||||  ||||||| ||||||||||||||||    
T  20924003 tttccatcactaatttccctccataattttactttttctagtagtgg 20923957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 38090357 - 38090403
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||| |||||||||| ||||||||||| || ||||||||||    
T  38090357 tttccgtcacaaatttccctccctaattttgctattcctagtagtgg 38090403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 816236 - 816191
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| |||| |||| |||||| |||||||    
T  816236 tttccgtcactaatttccctccctaaatttgttttttccagtagtg 816191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 2457762 - 2457803
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagt 60  Q
    |||| |||||||||||||||| |||||||||||||| |||||    
T  2457762 tttctgtcactaatttccctccctaattttgcttttcctagt 2457803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 15969879 - 15969924
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||| ||||||  ||||||| |||||||||||||||    
T  15969879 tttccgtcactaatatccctcattaattttactttttctagtagtg 15969924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 21871662 - 21871707
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||| |||| |||| |||||||||||||| ||||||||||||||    
T  21871662 tttccgccactgattttcctcgctaattttgttttttctagtagtg 21871707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 36993914 - 36993959
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| |||| |||||||||| |||||||||||||| |||||||||    
T  36993914 tttccatcacaaatttccctccctaattttgcttttcctagtagtg 36993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 39979669 - 39979624
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| |||||||||||||| ||| |||||    
T  39979669 tttccgtcacaaatttccctccctaattttgcttttcctaatagtg 39979624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 27132766 - 27132722
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    ||||||| || |||||||||| |||||||| ||||||||||||||    
T  27132766 tttccgttaccaatttccctctctaattttactttttctagtagt 27132722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 24576069 - 24576022
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgga 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24576069 tttccgtcactaatttccctcgctaattttgctttttctagtagtgga 24576022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 4331070 - 4331116
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4331070 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 4331116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 11938836 - 11938882
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  11938836 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 11938882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 8555349 - 8555304
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  8555349 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 8555304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 19240959 - 19241004
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19240959 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 19241004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 19314143 - 19314188
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19314143 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 19314188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 19488106 - 19488061
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19488106 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 19488061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 24193241 - 24193196
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  24193241 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 24193196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 25274689 - 25274734
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25274689 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 25274734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 27910809 - 27910764
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  27910809 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 27910764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 27957228 - 27957183
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  27957228 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 27957183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 30466999 - 30466954
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  30466999 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 30466954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 25655903 - 25655856
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgga 66  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25655903 tttccgtcactaatttccctcactaattttgctttttctagtagtgga 25655856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 3823225 - 3823270
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  3823225 tttccgtcactaatttccctcgctaattttgctttttctaatagtg 3823270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 4647800 - 4647755
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  4647800 tttccgtcactaatttccctcgctaattttgttttttctagtagtg 4647755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 8824917 - 8824962
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  8824917 tttccatcactaatttccctcgctaattttgctttttctagtagtg 8824962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 16061984 - 16061939
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  16061984 tttccgtcactaatttccctcgctaattttactttttctagtagtg 16061939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 17810390 - 17810435
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  17810390 tttccgtcactaattttcctcgctaattttgctttttctagtagtg 17810435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 19256304 - 19256349
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  19256304 tttccgtcactaatttccctcgttaattttgctttttctagtagtg 19256349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 27869330 - 27869375
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  27869330 tttccatcactaatttccctcgctaattttgctttttctagtagtg 27869375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 32248001 - 32248046
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  32248001 tttccgtcactaatttccctcgttaattttgctttttctagtagtg 32248046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 33652659 - 33652704
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  33652659 tttccgtcactaatttccctcgctaattttgctttttctggtagtg 33652704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 29351021 - 29351061
Alignment:
Q  24 gtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29351021 gtcactaatttccctcgctaattttgctttttctagtagtg 29351061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 9915086 - 9915043
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtag 62  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  9915086 tttccgtcactaatttctctcgctaattttgctttttctagtag 9915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 25000476 - 25000429
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgga 66  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  25000476 tttccgtcactaatttccctcactaattttactttttctagtagtgga 25000429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 43431604 - 43431558
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  43431604 tttccgtcactaatttccctcactaatttttctttttctagtagtgg 43431558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 9631496 - 9631541
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  9631496 tttccgtcactaattttccttgctaattttgctttttctagtagtg 9631541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 10917919 - 10917964
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||    
T  10917919 tttccgtcacaaatttccctccctaattttgctttttctagtagtg 10917964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 13060976 - 13060931
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||    
T  13060976 tttccgtcactaatttacctcgctaattttgcttttgctagtagtg 13060931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 15251693 - 15251738
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||    
T  15251693 tttccgtcactaatttccctccctaattttgctttttcaagtagtg 15251738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 17824661 - 17824616
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||    
T  17824661 tttccgtcacaaatttccctctctaattttgctttttctagtagtg 17824616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 18010105 - 18010060
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||    
T  18010105 tttccgtcactaatttctctcgctaattttgctttttctggtagtg 18010060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 21350570 - 21350615
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  21350570 tttccgtcactaatttcccttgcttattttgctttttctagtagtg 21350615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 22939405 - 22939450
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  22939405 tttccgtcactaatttccttcactaattttgctttttctagtagtg 22939450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 23752331 - 23752286
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||    
T  23752331 tttccgtcactaatatccctcgctaattttgctttttctaatagtg 23752286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 25273369 - 25273328
Alignment:
Q  23 cgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  25273369 cgtcactaatttccctcgttaattttgctttttctagtagtg 25273328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 29345163 - 29345208
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||    
T  29345163 tttccgtcactaatttccctccctaatttttctttttctagtagtg 29345208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 30688028 - 30688073
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||    
T  30688028 tttcggtcactgatttccctcgctaattttgctttttctagtagtg 30688073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 14304321 - 14304359
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttct 57  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  14304321 tttccatcactaatttccctcgctaattttgctttttct 14304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 24636744 - 24636790
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgct-ttttctagtagtg 64  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  24636744 tttccgtcactaatttccctcgttaattttgctattttctagtagtg 24636790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 6817146 - 6817191
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||||    
T  6817146 tttccgtcactgattttccttgctaattttgctttttctagtagtg 6817191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 21219285 - 21219240
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||    
T  21219285 tttccgtcactaatttctctcgctgatttttctttttctagtagtg 21219240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 32961751 - 32961796
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||||    
T  32961751 tttctgtcactgatttccctcgctaattttgctttttttagtagtg 32961796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 33413021 - 33412977
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||    
T  33413021 tttccgttactaatttccctcgctaatttt-ctttttctagtagtg 33412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 40289466 - 40289421
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||    
T  40289466 tttccgtcactaattttcctcgctaattttaatttttctagtagtg 40289421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 42700702 - 42700657
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||    
T  42700702 tttccgtcactgattttcctcgctaattttactttttctagtagtg 42700657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 6816422 - 6816383
Alignment:
Q  25 tcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  6816422 tcactaatttccctcgctaattatgcttttcctagtagtg 6816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 31399547 - 31399508
Alignment:
Q  25 tcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  31399547 tcactaatttccctcgttaattttgttttttctagtagtg 31399508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 37992191 - 37992234
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtag 62  Q
    |||||||||||||||| |||| |||||||||||||| |||||||    
T  37992191 tttccgtcactaattttcctccctaattttgcttttcctagtag 37992234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 17003361 - 17003399
Alignment:
Q  26 cactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  17003361 cactaattttcctccctaattttgctttttctagtagtg 17003399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 5670214 - 5670169
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||| | |||||| ||||||||| ||||    
T  5670214 tttccgtcactaatttccctcgttgattttgttttttctagcagtg 5670169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 6084291 - 6084246
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||  ||| |||||||||||||||||| |||||    
T  6084291 tttccgtcactaatttatctccctaattttgctttttctattagtg 6084246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 17103910 - 17103865
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||| ||| ||||||||| ||||||||||||||    
T  17103910 tttccgtcacaaatttctctctctaattttgttttttctagtagtg 17103865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 24479858 - 24479813
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| |||||||||||||||| |||||| |||||||| ||||||||    
T  24479858 tttctgtcactaatttccctctctaattatgctttttttagtagtg 24479813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 13564966 - 13564915
Alignment:
Q  13 tcatcatttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13564966 tcattatttccgtcactaatttccctcgctaattttgctttttctagtagtg 13564915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 22168360 - 22168406
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22168360 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 22168406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 4586803 - 4586758
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4586803 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 4586758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 7111991 - 7111946
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  7111991 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 7111946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 19839271 - 19839316
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19839271 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 19839316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 27040070 - 27040025
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  27040070 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 27040025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 55309257 - 55309212
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  55309257 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 55309212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 5473944 - 5473986
Alignment:
Q  22 ccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5473944 ccgtcactaatttccctcgctaattttgctttttctagtagtg 5473986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 9238670 - 9238625
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  9238670 tttccgtcactaatttccctcgctaattttgctttttttagtagtg 9238625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 9670524 - 9670479
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  9670524 tttccgtcactaatttccctcgctaatttttctttttctagtagtg 9670479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 30269033 - 30268988
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  30269033 tttccgtcactgatttccctcgctaattttgctttttctagtagtg 30268988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 30283156 - 30283201
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  30283156 tttccgtcactgatttccctcgctaattttgctttttctagtagtg 30283201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 32175782 - 32175737
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  32175782 tttccgtcactaatttccctcgttaattttgctttttctagtagtg 32175737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 38619939 - 38619984
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  38619939 tttccgtcattaatttccctcgctaattttgctttttctagtagtg 38619984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 38645842 - 38645887
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  38645842 tttccgtcaataatttccctcgctaattttgctttttctagtagtg 38645887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 44783575 - 44783620
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  44783575 tttccgtcactaatttccctcgctagttttgctttttctagtagtg 44783620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 45091353 - 45091398
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  45091353 tttccgtcactaatttccctcgctaattttgttttttctagtagtg 45091398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 4627123 - 4627079
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  4627123 tttccgtcattaatttccctcgctaattttgctttttctagtagt 4627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 18714994 - 18715040
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  18714994 tttccgtcacttatttccctcgctaatattgctttttctagtagtgg 18715040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 30420078 - 30420032
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||    
T  30420078 tttccgtcactaattttcctccctaattttgctttttctagtagtgg 30420032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 13028861 - 13028816
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||    
T  13028861 tttccgtcactaattttcctcgctaagtttgctttttctagtagtg 13028816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 45532624 - 45532579
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||    
T  45532624 tttccgtcactaatttccctcgttaattttgctttttctaatagtg 45532579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 46286274 - 46286229
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  46286274 tttccgtcactaatttccgtcactaattttgctttttctagtagtg 46286229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 54539378 - 54539423
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  54539378 tttccgtcactaattttccttgctaattttgctttttctagtagtg 54539423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 2275723 - 2275677
Alignment:
Q  19 tttccgtcactaatttccctcgctaa-ttttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  2275723 tttccgtcactaatttccctcgctaatttttgttttttctagtagtg 2275677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 18051931 - 18051969
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttct 57  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  18051931 tttccgtcactaatttccctcactaattttgctttttct 18051969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 1638539 - 1638584
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||||    
T  1638539 tttccgtcactaatttccctccctaattttgtttttcctagtagtg 1638584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 8878975 - 8879020
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||    
T  8878975 tttccgtcactaatttccctctctgattttgctttttcttgtagtg 8879020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 19680469 - 19680424
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||||    
T  19680469 tttccgtcactaaattccctcactaatttttctttttctagtagtg 19680424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 22128357 - 22128312
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| || |||||| ||||||||||||||    
T  22128357 tttccgtcactaatttccctccctgattttgttttttctagtagtg 22128312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 25026649 - 25026694
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||||    
T  25026649 tttccgtcactaatttccctcactaattttactttttctaatagtg 25026694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 29625417 - 29625462
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| ||||||||||||||||||||||||||| || |||||    
T  29625417 tttccgtcattaatttccctcgctaattttgctttttatattagtg 29625462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 33914151 - 33914196
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||    
T  33914151 tttccgtcacaaatttccctccctaattttgcttttcctagtagtg 33914196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 42055501 - 42055534
Alignment:
Q  31 atttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||    
T  42055501 atttccctcgctaattttgctttttctagtagtg 42055534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 24682372 - 24682328
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  24682372 tttccgtcattaatttccctccctaatttttctttttctagtagt 24682328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 37378668 - 37378628
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctag 59  Q
    ||||||||| |||||| ||||||||||||||||||||||||    
T  37378668 tttccgtcaataattttcctcgctaattttgctttttctag 37378628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 4606872 - 4606829
Alignment:
Q  21 tccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||    
T  4606872 tccgtcactaatttccctccctaattttacttttcctagtagtg 4606829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 12072060 - 12072099
Alignment:
Q  25 tcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  12072060 tcactaatttcgctcgctaattttgctttttctaatagtg 12072099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 9913350 - 9913396
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||| |||| ||||||||  |||||||||||||||    
T  9913350 tttccgtcactaattttcctccctaattttaatttttctagtagtgg 9913396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 30568044 - 30568006
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttct 57  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  30568044 tttccgtcactaatttcgctcgctaattttgttttttct 30568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 9058997 - 9058952
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| ||||| |||||||||| |||||||||||||| |||||||||    
T  9058997 tttcagtcacaaatttccctccctaattttgcttttcctagtagtg 9058952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 9239326 - 9239281
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||| ||||||| || ||||| ||||||    
T  9239326 tttccgtcactaatttccctcgttaattttactctttcttgtagtg 9239281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 12106074 - 12106119
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| ||| |||||||||||||||||||| ||||||||| |||||    
T  12106074 tttccatcaataatttccctcgctaattttactttttctaatagtg 12106119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 16915461 - 16915506
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| |||||||||| |||| || |||||||||||||||||||||    
T  16915461 tttccatcactaattttcctccctgattttgctttttctagtagtg 16915506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 25225189 - 25225234
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| | ||||||||| |||||||| |||||||||||||||    
T  25225189 tttccgtcattgatttccctccctaatttttctttttctagtagtg 25225234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 30508091 - 30508124
Alignment:
Q  31 atttccctcgctaattttgctttttctagtagtg 64  Q
    |||| |||||||||||||||||||||||||||||    
T  30508091 attttcctcgctaattttgctttttctagtagtg 30508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 36689769 - 36689814
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| |||||||||||||||| |||||||| ||||||| ||||||    
T  36689769 tttccatcactaatttccctcgttaattttgttttttcttgtagtg 36689814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 12779690 - 12779737
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgga 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12779690 tttccgtcactaatttccctcgctaattttgctttttctagtagtgga 12779737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 20065119 - 20065074
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  20065119 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 20065074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 37552317 - 37552362
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  37552317 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 37552362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 41736262 - 41736307
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  41736262 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 41736307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 44476420 - 44476375
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  44476420 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 44476375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 7093658 - 7093704
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  7093658 tttccgtcactaatttccctcgctaattttgcttttactagtagtgg 7093704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 23858000 - 23857958
Alignment:
Q  22 ccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23858000 ccgtcactaatttccctcgctaattttgctttttctagtagtg 23857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 13788100 - 13788055
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  13788100 tttccgtcactgatttccctcgctaattttgctttttctagtagtg 13788055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 15636780 - 15636735
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  15636780 tttccgtcactaatttccctcgctaattttgctttttctggtagtg 15636735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 21293756 - 21293711
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  21293756 tttccgtcactaatttccctcgctaattttgttttttctagtagtg 21293711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 22140409 - 22140364
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  22140409 tttccgtcactaatttccctcgttaattttgctttttctagtagtg 22140364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 27039953 - 27039908
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  27039953 tttccgtcactaatttccctctctaattttgctttttctagtagtg 27039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 32009043 - 32009088
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  32009043 tttccgtcactaattttcctcgctaattttgctttttctagtagtg 32009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 32185922 - 32185967
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  32185922 tttccgtcactaatttccctcgctaattttgttttttctagtagtg 32185967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 43408556 - 43408511
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  43408556 tttccgtcactaatttccctcactaattttgctttttctagtagtg 43408511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 28319624 - 28319580
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  28319624 tttccgtcactaatttccctcactaattttgctttttctagtagt 28319580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 1141626 - 1141664
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttct 57  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1141626 tttccgtcactaatttccctcgctaattttgctttttct 1141664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 32300541 - 32300579
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttct 57  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32300541 tttccgtcactaatttccctcgctaattttgctttttct 32300579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 8430386 - 8430431
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  8430386 tttccgtcactaatttcccccgctaattttgttttttctagtagtg 8430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 18551298 - 18551253
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||    
T  18551298 tttccgtcactaattttcctcgctaattttgctttttttagtagtg 18551253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 28841387 - 28841342
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||    
T  28841387 tttccgttactaatttccctcgctaattttgcttttcctagtagtg 28841342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 41637708 - 41637753
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||    
T  41637708 tttccgtcacaaatttccctccctaattttgctttttctagtagtg 41637753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 44723022 - 44723067
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  44723022 tttccatcattaatttccctcgctaattttgctttttctagtagtg 44723067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 23388423 - 23388379
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    |||||||||| |||||||||||||||||||| |||||||||||||    
T  23388423 tttccgtcaccaatttccctcgctaattttgttttttctagtagt 23388379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 26243359 - 26243321
Alignment:
Q  26 cactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  26243359 cactaatttccctcgttaattttgctttttctagtagtg 26243321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 14757166 - 14757121
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| |||||| | |||||||||||||||||||||||||||    
T  14757166 tttccgtcattaattttcttcgctaattttgctttttctagtagtg 14757121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 22192269 - 22192314
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||| ||| || |||||||||||||||||||||    
T  22192269 tttccgtcactaatttctctccctgattttgctttttctagtagtg 22192314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 29749448 - 29749403
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||  ||||||||||||||||||||||||    
T  29749448 tttccgtcacaaatttcccttcctaattttgctttttctagtagtg 29749403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 36550925 - 36550970
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  36550925 tttccatcactaatttccctctctaattttgttttttctagtagtg 36550970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 37724037 - 37723992
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||| ||||| |||||||||| ||||    
T  37724037 tttccgtcactaatttccctcgctgatttttctttttctagcagtg 37723992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 38362316 - 38362276
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctag 59  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  38362316 tttccgtcactaatttcccttactaattttgctttttctag 38362276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 12860274 - 12860235
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttcta 58  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  12860274 tttccgtcactaattttcctccctaattttgctttttcta 12860235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 28262454 - 28262496
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagta 61  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||    
T  28262454 tttccatcactaatttcccttgctaattttactttttctagta 28262496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 13613134 - 13613093
Alignment:
Q  23 cgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||| ||||||||||||| ||||||| |||||||    
T  13613134 cgtcactaattttcctcgctaatttttctttttccagtagtg 13613093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 16098954 - 16098917
Alignment:
Q  27 actaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  16098954 actaatttccctccctaattttgatttttctagtagtg 16098917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 26687735 - 26687690
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| |||||||||||  |||||||||||| ||||||||||    
T  26687735 tttccgtcattaatttccctccttaattttgctttatctagtagtg 26687690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 27327706 - 27327751
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| ||||||| || |||||||||||||| |||||||||    
T  27327706 tttccgtcacaaatttccatccctaattttgcttttcctagtagtg 27327751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 30783428 - 30783473
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||  |||||||||||||| |||||||||    
T  30783428 tttccgtcacaaatttcccttcctaattttgcttttcctagtagtg 30783473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 40018892 - 40018937
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||   |||||||| ||||||||||||||    
T  40018892 tttccgtcactaatttccctttttaattttgttttttctagtagtg 40018937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 84397 - 84447
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtggattt 69  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  84397 tttccgtcactaatttcccttgctaattttgctttttctagtagtggattt 84447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 8155 - 8110
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  8155 tttccgtcattaatttccctcgctaattttgctttttctagaagtg 8110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 21887 - 21842
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  21887 tttccgtcattaatttccctcgctaattttgctttttctagaagtg 21842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 6598558 - 6598612
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtggatttaggt 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  6598558 tttccgtcactaatttccctcgctaattttgctttttctagtagtgaagttaggt 6598612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 15448479 - 15448525
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15448479 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 15448525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 6605541 - 6605496
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6605541 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 6605496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 9893057 - 9893102
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  9893057 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 9893102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 24661054 - 24661009
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  24661054 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 24661009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 26224522 - 26224567
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26224522 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 26224567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 28365005 - 28365050
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  28365005 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 28365050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 30834005 - 30833960
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  30834005 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 30833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 5360503 - 5360547
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  5360503 tttccgtcactaatttccctcgctaattttgctttttctagtagt 5360547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 15961452 - 15961402
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtggattt 69  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  15961452 tttccgtcactaatttccctcgttaattttgctttttctagtagtgtattt 15961402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 495672 - 495627
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  495672 tttccgtcactaatttcccttgctaattttgctttttctagtagtg 495627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 1939287 - 1939242
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  1939287 tttcggtcactaatttccctcgctaattttgctttttctagtagtg 1939242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 15364503 - 15364458
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  15364503 tttccgtcactaatttccctcactaattttgctttttctagtagtg 15364458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 16250847 - 16250802
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  16250847 tttccgtcactaatttccctcgttaattttgctttttctagtagtg 16250802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 20182239 - 20182284
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  20182239 tttccgtcactaatttccctcgctaattttactttttctagtagtg 20182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 21990220 - 21990175
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  21990220 tttccgtcattaatttccctcgctaattttgctttttctagtagtg 21990175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 22153752 - 22153707
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  22153752 tttccgtcactaatttccctcgctaattttactttttctagtagtg 22153707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 22579394 - 22579349
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  22579394 tttccgtcactaatttccctcgctaattttgctttttctaatagtg 22579349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 27796875 - 27796835
Alignment:
Q  23 cgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27796875 cgtcactaatttccctcgctaattttgctttttctagtagt 27796835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 2669407 - 2669450
Alignment:
Q  23 cgtcactaatttccctcgctaattttgctttttctagtagtgga 66  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  2669407 cgtcactaatttccctcgttaattttgctttttctagtagtgga 2669450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 15509250 - 15509296
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  15509250 tttccgtcactaatttccctcgctaatttttctttttctggtagtgg 15509296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 21141033 - 21141075
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagta 61  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  21141033 tttccgtcactaatttccctcgttaattttgctttttctagta 21141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 25398096 - 25398138
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagta 61  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  25398096 tttccgtcactaatttccctcgctaatttttctttttctagta 25398138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 5250233 - 5250278
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  5250233 tttccgtcactaatttccctcgctgatttttctttttctagtagtg 5250278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 9885337 - 9885382
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| || |||||||||||||||||||||    
T  9885337 tttccgtcactaatttccctccctgattttgctttttctagtagtg 9885382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 11049796 - 11049751
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||    
T  11049796 tttccgtcactaatttcccttgctaattttgttttttctagtagtg 11049751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 12160888 - 12160847
Alignment:
Q  23 cgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  12160888 cgtcactaatttccctcgctaattttactttttctagtagtg 12160847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 12200788 - 12200833
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  12200788 tttccgtcactaatttccctcactaattttgctttttctagcagtg 12200833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 28668194 - 28668239
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||    
T  28668194 tttccgtcactgatttccctcgctaattttactttttctagtagtg 28668239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 10458858 - 10458902
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||    
T  10458858 tttccgtcactaatttccctcactaattttactttttctagtagt 10458902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 33191180 - 33191219
Alignment:
Q  25 tcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  33191180 tcactaatttccctcgctaattttgctttttctaatagtg 33191219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 12951802 - 12951848
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||||    
T  12951802 tttccgtcacaaatttccctctctaattttgcttttcctagtagtgg 12951848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 14036705 - 14036751
Alignment:
Q  18 atttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  14036705 atttctgtcactaatttccctcgctaattttcctttttttagtagtg 14036751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 2992709 - 2992754
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| |||||||||||||||||||||| ||||||| |||||||||    
T  2992709 tttccatcactaatttccctcgctaattatgcttttcctagtagtg 2992754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 6978371 - 6978416
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||||    
T  6978371 tttccgtaactaatttccctcgctaattttgcttttcctaatagtg 6978416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 8844213 - 8844168
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| || ||||| |||||||||||||||    
T  8844213 tttccgtcactaatttccctccctgatttttctttttctagtagtg 8844168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 12157421 - 12157380
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagt 60  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  12157421 tttccgtcactaatttccctccttaattttgctttttctagt 12157380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 18033571 - 18033526
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||    
T  18033571 tttccgtcacaaatttccctccctaattttgcttttcctagtagtg 18033526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 18492463 - 18492508
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| | |||||||||||||||||||||| ||||    
T  18492463 tttccgtcactaatttgcatcgctaattttgctttttctagcagtg 18492508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 22083932 - 22083977
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||    
T  22083932 tttccgtcacaaatttccctccctaattttgcttttcctagtagtg 22083977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 33250753 - 33250708
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||    
T  33250753 tttccgtcactaatttccctcgttaattttgtcttttctagtagtg 33250708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 5192234 - 5192195
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttcta 58  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  5192234 tttccttcactaattttcctcgctaattttgctttttcta 5192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 11077743 - 11077785
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagta 61  Q
    |||||||||| |||||||||| |||||||| ||||||||||||    
T  11077743 tttccgtcacaaatttccctccctaatttttctttttctagta 11077785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 11350273 - 11350315
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagta 61  Q
    |||||||||| |||||||||| |||||||||||||| ||||||    
T  11350273 tttccgtcacaaatttccctccctaattttgcttttcctagta 11350315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 12499310 - 12499356
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttg-ctttttctagtagtg 64  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||    
T  12499310 tttccgtcactactttccctcgctaattttgtttttttctagtagtg 12499356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 12506639 - 12506685
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttg-ctttttctagtagtg 64  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||    
T  12506639 tttccgtcactactttccctcgctaattttgtttttttctagtagtg 12506685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 12509591 - 12509545
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttg-ctttttctagtagtg 64  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||    
T  12509591 tttccgtcactactttccctcgctaattttgtttttttctagtagtg 12509545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 11530319 - 11530364
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| |||||||||||||| ||| |||||    
T  11530319 tttccgtcacaaatttccctccctaattttgcttttcctaatagtg 11530364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 12351631 - 12351586
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||  ||||| | |||||||||||||||    
T  12351631 tttccgtcactaatttccctccttaattatactttttctagtagtg 12351586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 13251420 - 13251379
Alignment:
Q  23 cgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||| ||| |||||||||||||||||| |||||    
T  13251420 cgtcactaatttctctctctaattttgctttttctattagtg 13251379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 14886655 - 14886700
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| ||||||||||| |||| ||||||||||||||||| ||||||    
T  14886655 tttctgtcactaattttcctccctaattttgctttttctggtagtg 14886700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 17919630 - 17919675
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| | ||||| ||||||||||||| ||||||||||||||    
T  17919630 tttccgtcattgatttctctcgctaattttgttttttctagtagtg 17919675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 18048882 - 18048927
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||| ||||||||| |||| |||||||||    
T  18048882 tttccgtcactaattttcctctctaattttgtttttcctagtagtg 18048927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 26939686 - 26939726
Alignment:
Q  24 gtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||  ||||||| |||||||||||||||    
T  26939686 gtcactaatttccctcagtaattttactttttctagtagtg 26939726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 36196488 - 36196534
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36196488 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 36196534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 12045821 - 12045866
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12045821 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 12045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 16121884 - 16121839
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16121884 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 16121839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 38837716 - 38837671
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  38837716 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 38837671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 7888891 - 7888938
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgga 66  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7888891 tttccgtcaataatttccctcgctaattttgctttttctagtagtgga 7888938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 40484132 - 40484183
Alignment:
Q  13 tcatcatttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  40484132 tcattatttccgtcactaatttccctcgctaatttttctttttctagtagtg 40484183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 5982740 - 5982786
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  5982740 tttccgtcactaatttccctcgctgattttgctttttctagtagtgg 5982786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 16631919 - 16631873
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  16631919 tttccgtcactaatttccctcgctaatttttctttttctagtagtgg 16631873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 618388 - 618433
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  618388 tttccgtcactaatttccctcgctaattttgctttttctaatagtg 618433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 746913 - 746868
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  746913 tttccgtcactaatttccctcgctaattttgctttttcttgtagtg 746868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 4125233 - 4125188
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  4125233 tttccgtcactaatttccctcgctaattttactttttctagtagtg 4125188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 7003775 - 7003730
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  7003775 tttccgtcactaatttccctcgctaattttgttttttctagtagtg 7003730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 8108905 - 8108860
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  8108905 tttccgtcactaatttccctctctaattttgctttttctagtagtg 8108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 35620389 - 35620344
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  35620389 tttccgtcactaatttccctcgctaattttgctttttctaatagtg 35620344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 29727939 - 29727895
Alignment:
Q  20 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  29727939 ttccgtcactaatttccctcgctaattttactttttctagtagtg 29727895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 36716245 - 36716198
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgga 66  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  36716245 tttccatcactaatttccctcgctaattttgttttttctagtagtgga 36716198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 2472759 - 2472713
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||||| || |||||||||||||||||||||||||    
T  2472759 tttccgtcactaatttccttcactaattttgctttttctagtagtgg 2472713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 13974119 - 13974077
Alignment:
Q  23 cgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  13974119 cgtcgctaatttccctcgctaattttgctttttctagtagtgg 13974077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 10494831 - 10494876
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  10494831 tttccgtcactaatttccctcgctacatttgctttttctagtagtg 10494876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 12328271 - 12328226
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  12328271 tttccgttactaatttccctcactaattttgctttttctagtagtg 12328226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 15061067 - 15061112
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||    
T  15061067 tttcggtcactaatttccctcgctaattttgctttttctggtagtg 15061112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 17039676 - 17039631
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||    
T  17039676 tttccgtcactaattttcctcactaattttgctttttctagtagtg 17039631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 23409075 - 23409120
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  23409075 tttccgtcactaatttttctcgctaattttgctttttctagtagtg 23409120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 26708630 - 26708585
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||    
T  26708630 tttccggcactaatttccctcgctaattttgcattttctagtagtg 26708585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 26978364 - 26978319
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||    
T  26978364 tttccggcactaatttccctcgctaattttgcattttctagtagtg 26978319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 28265520 - 28265475
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||    
T  28265520 tttccgtcactaattttcctcgctaattttactttttctagtagtg 28265475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 17772013 - 17771969
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  17772013 tttccgtcactaatttccctcgctgatttttctttttctagtagt 17771969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 23975729 - 23975765
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgcttttt 55  Q
    |||||||||||||||||||||||||||||||||||||    
T  23975729 tttccgtcactaatttccctcgctaattttgcttttt 23975765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 8886892 - 8886849
Alignment:
Q  23 cgtcactaatttccctcgctaattttgctttttctagtagtgga 66  Q
    |||||| ||||| |||||||||||||||||||||||||||||||    
T  8886892 cgtcacaaattttcctcgctaattttgctttttctagtagtgga 8886849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 16464722 - 16464769
Alignment:
Q  18 atttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||||||    
T  16464722 atttccgtcactaatttccctccctaattttgcctttcctagtagtgg 16464769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 19891025 - 19890986
Alignment:
Q  25 tcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  19891025 tcactaatttccctcgctaattttgctttttctaatagtg 19890986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 13620172 - 13620127
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| || ||||| |||||||||||||||    
T  13620172 tttccgtcactaatttccctccctgatttttctttttctagtagtg 13620127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 20187986 - 20187941
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||    
T  20187986 tttccgtcactaatttccttcgctaattttgcttttgctaatagtg 20187941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 24138886 - 24138841
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||    
T  24138886 tttccgtcaccaattttcctcgctaattttgctttttctaatagtg 24138841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 25397833 - 25397788
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||    
T  25397833 tttccgtcacaaatttccctccctaattttgcttttcctagtagtg 25397788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 25652628 - 25652583
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||    
T  25652628 tttctgtcactgatttccctcgctaattttgctttttctaatagtg 25652583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 33818606 - 33818561
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||    
T  33818606 tttccgtcacaaatttccctccccaattttgctttttctagtagtg 33818561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 36831931 - 36831890
Alignment:
Q  23 cgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  36831931 cgtccctaatttccctcactaattttgctttttctagtagtg 36831890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 10420297 - 10420252
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| ||||||||| ||| | ||||||||    
T  10420297 tttccgtcactaatttccctctctaattttgatttctttagtagtg 10420252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 17986823 - 17986868
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||| ||| |||||||| |||||||||| ||||    
T  17986823 tttccgtcactaatttctctcactaattttactttttctagcagtg 17986868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 17036456 - 17036412
Alignment:
Q  20 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||| || ||| |||||||||| |||||||||||||    
T  17036456 ttccgtcactaatctcgctccctaattttgcattttctagtagtg 17036412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 5e-17; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 27449178 - 27449223
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  27449178 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 27449223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 43329808 - 43329763
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43329808 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 43329763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 48404950 - 48404995
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  48404950 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 48404995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 11915848 - 11915892
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11915848 tttccgtcactaatttccctcgctaattttgctttttctagtagt 11915892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 1745533 - 1745487
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  1745533 tttccgtcactaatttccctcgctaattttgctttttttagtagtgg 1745487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 21816811 - 21816857
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  21816811 tttccgtcactaatttccctcgctaatttttctttttctagtagtgg 21816857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 5261027 - 5261072
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  5261027 tttccgtcactaatttccctcactaattttgctttttctagtagtg 5261072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 8110429 - 8110474
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  8110429 tttccgtcactaatttccctcactaattttgctttttctagtagtg 8110474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 9652668 - 9652713
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  9652668 tttccgtcactaatttccctcgccaattttgctttttctagtagtg 9652713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 11219228 - 11219273
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  11219228 tttccgtcactaatttccctcgctaattttgttttttctagtagtg 11219273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 13921415 - 13921460
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  13921415 tttccgtcactaattttcctcgctaattttgctttttctagtagtg 13921460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 18091592 - 18091547
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  18091592 tttccgtcactaatttccctcgctaattttgctttttttagtagtg 18091547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 18104575 - 18104530
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  18104575 tttccgtcaataatttccctcgctaattttgctttttctagtagtg 18104530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 19223539 - 19223584
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  19223539 tttccgtcaccaatttccctcgctaattttgctttttctagtagtg 19223584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 19269909 - 19269864
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  19269909 tttccgtcactaatttccctcgctaattttgctttttctaatagtg 19269864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 25882660 - 25882705
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  25882660 tttccgtcactaatttccctcgctaattttgctttttctaatagtg 25882705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 26098903 - 26098948
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  26098903 tttccatcactaatttccctcgctaattttgctttttctagtagtg 26098948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 26390679 - 26390634
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  26390679 tttccgtcactaatttctctcgctaattttgctttttctagtagtg 26390634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 29236134 - 29236179
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  29236134 tttccgtcactaatttccctcgctaattttgctttttctaatagtg 29236179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 10941710 - 10941664
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||    
T  10941710 tttccgtcactaatttcccttactaattttgctttttctagtagtgg 10941664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 17762732 - 17762778
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||    
T  17762732 tttccgtcactaatttccctcgctaattttgttctttctagtagtgg 17762778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 19064052 - 19064098
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||    
T  19064052 tttccgtcactaatttccctcgctaattttgttctttctagtagtgg 19064098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 1311004 - 1310959
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  1311004 tttccgtcactaattttccttgctaattttgctttttctagtagtg 1310959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 3461355 - 3461310
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  3461355 tttctgtcactaatttccttcgctaattttgctttttctagtagtg 3461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 5565812 - 5565857
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| || |||||||||||||||||||||    
T  5565812 tttccgtcactaatttccctccctgattttgctttttctagtagtg 5565857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 7623576 - 7623531
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  7623576 tttccgtcactaatttccctcgctgatttttctttttctagtagtg 7623531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 8428261 - 8428306
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||    
T  8428261 tttccgtcactaatttccctcgctaattttattttttctagtagtg 8428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 8546335 - 8546380
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||    
T  8546335 tttccgtcactaattttcctcgctaattttgctttttctggtagtg 8546380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 11007728 - 11007683
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  11007728 tttccgtcactaatttcccttactaattttgctttttctagtagtg 11007683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 11386427 - 11386468
Alignment:
Q  21 tccgtcactaatttccctcgctaattttgctttttctagtag 62  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  11386427 tccgtcactaatttccatcgctaattttgctttttctagtag 11386468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 13905083 - 13905038
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  13905083 tttccgtcactaatttcgctctctaattttgctttttctagtagtg 13905038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 18380114 - 18380159
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||    
T  18380114 tttccgtcactgatttccctcgctaattttactttttctagtagtg 18380159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 20761995 - 20761950
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| || |||||||||||||||||||||    
T  20761995 tttccgtcactaatttccctccctgattttgctttttctagtagtg 20761950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 21020155 - 21020200
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||    
T  21020155 tttccgtcactaatttccctccctaattttgcttttcctagtagtg 21020200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 29956462 - 29956507
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  29956462 tttccatcactaatttccctcgctaattttactttttctagtagtg 29956507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 30005617 - 30005662
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  30005617 tttccatcactaatttccctcgctaattttactttttctagtagtg 30005662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 29704077 - 29704041
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgcttttt 55  Q
    |||||||||||||||||||||||||||||||||||||    
T  29704077 tttccgtcactaatttccctcgctaattttgcttttt 29704041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 18539894 - 18539941
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgga 66  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  18539894 tttccgtcactaatttccctctctaattttgctttttctggtaatgga 18539941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 27969006 - 27969049
Alignment:
Q  20 ttccgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  27969006 ttccgtcactaatttccctccctgattttgctttttctagtagt 27969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 4393395 - 4393357
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttct 57  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  4393395 tttccgtcactaatttccctcactaattttgctttttct 4393357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 8543558 - 8543604
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  8543558 tttccatcactaatttccctcgctaattttgttttttctaatagtgg 8543604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 6088273 - 6088228
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||  || |||||||||||||||||||||    
T  6088273 tttccgtcactaatttcccttacttattttgctttttctagtagtg 6088228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 6447291 - 6447246
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| ||||||||||||||| |||||||||||||| |||||||||    
T  6447291 tttccatcactaatttccctccctaattttgcttttcctagtagtg 6447246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 10772098 - 10772053
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| ||||||||||||||||| ||||||| |||||||||||||||    
T  10772098 tttctgtcactaatttccctcgttaattttactttttctagtagtg 10772053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 10803811 - 10803856
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  10803811 tttccgtcattaatttccctccctaatttggctttttctagtagtg 10803856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 11837259 - 11837214
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||||    
T  11837259 tttccatcacgaatttccctcgctaattttgttttttctagtagtg 11837214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 15064037 - 15063992
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||    
T  15064037 tttccgtcacaaatttccctccctaattttgcttttcctagtagtg 15063992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 19610428 - 19610473
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||    
T  19610428 tttccgtcacaaatttccctccctaattttgcttttcctagtagtg 19610473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 30219428 - 30219473
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||    
T  30219428 tttccgtcacaaatttccctccctaattttgcttttcctagtagtg 30219473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 46012773 - 46012728
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||| || |||||||||||||||||||||    
T  46012773 tttccgtcactaattttcctccctgattttgctttttctagtagtg 46012728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 16299951 - 16299999
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtggat 67  Q
    |||||||||| |||||| ||| |||||||||||||| ||||||||||||    
T  16299951 tttccgtcacaaatttcgctccctaattttgcttttcctagtagtggat 16299999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 23773568 - 23773612
Alignment:
Q  20 ttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||    
T  23773568 ttccgtcactaatttcccttactaattttgttttttctagtagtg 23773612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 17269639 - 17269604
Alignment:
Q  29 taatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||| |||||||||||||||||||||||||||    
T  17269639 taatttccatcgctaattttgctttttctagtagtg 17269604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 29451184 - 29451230
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttg-ctttttctagtagtg 64  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||    
T  29451184 tttccgtcactaatttccctcgttaattttgtttttttctagtagtg 29451230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 5744506 - 5744551
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| ||||| |||| |||||||||||||| |||||||||    
T  5744506 tttccgtcacaaattttcctccctaattttgcttttcctagtagtg 5744551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 5781465 - 5781510
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| ||||| |||| |||||||||||||| |||||||||    
T  5781465 tttccgtcacaaattttcctccctaattttgcttttcctagtagtg 5781510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 11085387 - 11085342
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||| ||| ||||| |||||||||||| |||||||||||||||    
T  11085387 tttccgttactgatttctctcgctaattttactttttctagtagtg 11085342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 15501596 - 15501551
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| ||||||  |||||||||||| |||||||||||||||    
T  15501596 tttccgtcattaatttttctcgctaattttactttttctagtagtg 15501551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 21088840 - 21088885
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| |||| |||||||||  ||||||||    
T  21088840 tttccgtcactaatttccctccctaactttgcttttcttagtagtg 21088885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 21490079 - 21490034
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| | ||||||||| ||||||||| ||||||||||||||    
T  21490079 tttccgtcattgatttccctcactaattttgttttttctagtagtg 21490034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 31250178 - 31250223
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||| | |||| |||||||||| |||||||||||||    
T  31250178 tttccgtcactaatcttcctccctaattttgcattttctagtagtg 31250223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 36543839 - 36543884
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| |||||||||| |||| |||||||| |||||||||||||||    
T  36543839 tttccatcactaattttcctccctaatttttctttttctagtagtg 36543884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 36564484 - 36564439
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| |||||||||| |||| |||||||| |||||||||||||||    
T  36564484 tttccatcactaattttcctccctaatttttctttttctagtagtg 36564439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 37283613 - 37283658
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| |||||||||||||| ||| |||||    
T  37283613 tttccgtcacaaatttccctccctaattttgcttttcctaatagtg 37283658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 46942577 - 46942622
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| ||||||||||||| || ||||||||| ||||||||||||||    
T  46942577 tttctgtcactaatttccttccctaattttgatttttctagtagtg 46942622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 47263310 - 47263265
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| ||||| ||||||| ||| |||||||||||||||||||||||    
T  47263310 tttctgtcaccaatttccttcgttaattttgctttttctagtagtg 47263265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 20088504 - 20088540
Alignment:
Q  28 ctaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||| |||||||| |||||||||||||||    
T  20088504 ctaatttccctctctaattttactttttctagtagtg 20088540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 26963290 - 26963254
Alignment:
Q  23 cgtcactaatttccctcgctaattttgctttttctag 59  Q
    |||||||||||||||||| |||||||| |||||||||    
T  26963290 cgtcactaatttccctcgttaattttgttttttctag 26963254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 27182698 - 27182658
Alignment:
Q  24 gtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| ||||||||| |||| |||||||||    
T  27182698 gtcactaatttccctccctaattttgtttttcctagtagtg 27182658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 40287526 - 40287486
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctag 59  Q
    ||||||||  |||||||||| ||||||||||||||||||||    
T  40287526 tttccgtctataatttcccttgctaattttgctttttctag 40287486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 5e-17; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 8941039 - 8940994
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  8941039 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 8940994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 9110020 - 9109975
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  9110020 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 9109975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 12369996 - 12369951
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12369996 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 12369951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 12720903 - 12720948
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12720903 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 12720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 28229500 - 28229455
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  28229500 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 28229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 46790094 - 46790139
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  46790094 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 46790139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 45839386 - 45839432
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  45839386 tttccgtcactaatttccctcgttaattttgctttttctagtagtgg 45839432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 6412098 - 6412053
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  6412098 tttccgttactaatttccctcgctaattttgctttttctagtagtg 6412053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 6459311 - 6459356
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  6459311 tttccgtcactaatttccctcgctaatttcgctttttctagtagtg 6459356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 7181600 - 7181555
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  7181600 tttccgtcactaatttcccttgctaattttgctttttctagtagtg 7181555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 20408205 - 20408160
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  20408205 tttccgtcactaattttcctcgctaattttgctttttctagtagtg 20408160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 29549516 - 29549557
Alignment:
Q  23 cgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29549516 cgtcactaatttccctcgctaattttgctttttctagtagtg 29549557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 46339490 - 46339445
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  46339490 tttccgtcactaattttcctcgctaattttgctttttctagtagtg 46339445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 50092343 - 50092298
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  50092343 tttccgtcactaatttccctcgctaatttttctttttctagtagtg 50092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 51973518 - 51973563
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  51973518 tttccgttactaatttccctcgctaattttgctttttctagtagtg 51973563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 25788042 - 25787998
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  25788042 tttccgtcactaattttcctcgctaattttgctttttctagtagt 25787998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 46786003 - 46785964
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttcta 58  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  46786003 tttccgtcactaatttccctcgctaattttgctttttcta 46785964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 22603642 - 22603688
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||    
T  22603642 tttccatcactaatttcccttgctaattttgctttttctagtagtgg 22603688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 4340501 - 4340546
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||    
T  4340501 tttccgtcactaatttcccttgctaattttgctttttctaatagtg 4340546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 9177194 - 9177239
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  9177194 tttccgttactaatttccctcgctaattttgttttttctagtagtg 9177239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 9985372 - 9985327
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||    
T  9985372 tttccgtcactaatttcccttgctaattttgttttttctagtagtg 9985327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 17200055 - 17200010
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  17200055 tttccgtcactgatttccctcgctaattttgttttttctagtagtg 17200010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 19865338 - 19865383
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||    
T  19865338 tttccgtcactaattttcctcgctaattttactttttctagtagtg 19865383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 20290366 - 20290321
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||    
T  20290366 tttccgtcactaatttccctcgctaattttactttttctagcagtg 20290321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 41120782 - 41120737
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||    
T  41120782 tttccatcactaatttccctcgctaattttgctttttctattagtg 41120737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 41752527 - 41752572
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  41752527 tttccgtcactaatttccgtcactaattttgctttttctagtagtg 41752572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 48522612 - 48522657
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||    
T  48522612 tttctgtcactaattttcctcgctaattttgctttttctagtagtg 48522657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 50845375 - 50845330
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||    
T  50845375 tttccgtcacaaatttccctccctaattttgctttttctagtagtg 50845330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 52183772 - 52183817
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||    
T  52183772 tttccgtcattaatttccctcgttaattttgctttttctagtagtg 52183817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 18890594 - 18890556
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttct 57  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  18890594 tttccatcactaatttccctcgctaattttgctttttct 18890556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 12161908 - 12161953
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||    
T  12161908 tttccgtcaataattttcctcgctaattttactttttctagtagtg 12161953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 14760961 - 14761006
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| ||||||||||  |||||||||||||||||||||||    
T  14760961 tttccgtcacaaatttccctctttaattttgctttttctagtagtg 14761006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 15243179 - 15243224
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||    
T  15243179 tttccgtcactaatttctctcgctgatttttctttttctagtagtg 15243224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 17661144 - 17661189
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||    
T  17661144 tttccgtcactaatttccgtcgttaattttgctttttctaatagtg 17661189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 18894941 - 18894900
Alignment:
Q  23 cgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  18894941 cgtcactaattttcctcgctaattttgcttttcctagtagtg 18894900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 22158896 - 22158941
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||    
T  22158896 tttctgtcactaatttccctcgctaattttactttttctggtagtg 22158941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 23457991 - 23458036
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||    
T  23457991 tttccgtcaataattttcctcgctaattttactttttctagtagtg 23458036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 38531215 - 38531170
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||| ||||||||| |||||||| |||||||||||||||    
T  38531215 tttccgtcacttatttccctccctaattttactttttctagtagtg 38531170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 46865337 - 46865382
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||    
T  46865337 tttccgtcactaatttccctccctagtttttctttttctagtagtg 46865382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 9259228 - 9259184
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||    
T  9259228 tttccgtcactaattttcctcgttaattttgttttttctagtagt 9259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 30928423 - 30928388
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttt 54  Q
    ||||||||||||||||||||| ||||||||||||||    
T  30928423 tttccgtcactaatttccctctctaattttgctttt 30928388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 19081822 - 19081868
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    ||||| ||||||||||||||| |||||||| |||||| |||||||||    
T  19081822 tttccatcactaatttccctctctaattttactttttttagtagtgg 19081868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 19129710 - 19129756
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    ||||| ||||||||||||||| |||||||| |||||| |||||||||    
T  19129710 tttccatcactaatttccctctctaattttactttttttagtagtgg 19129756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 20581004 - 20581050
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    ||||| ||||||||||||||| |||||||| |||||| |||||||||    
T  20581004 tttccatcactaatttccctctctaattttactttttttagtagtgg 20581050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 12989946 - 12989991
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||| ||| ||||||||||||||| ||||||||    
T  12989946 tttccgtcaccaatttctctctctaattttgctttttttagtagtg 12989991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 13102410 - 13102455
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| ||||||||||  ||||||||||||| |||||||||    
T  13102410 tttccgtcacaaatttccctccttaattttgcttttcctagtagtg 13102455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 13195677 - 13195722
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| |||||||| |||||| |||||||||| |||||||||||||    
T  13195677 tttccatcactaatctccctccctaattttgcattttctagtagtg 13195722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 16913622 - 16913581
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagt 60  Q
    ||||||||||||||||||||  |||||||||||||| |||||    
T  16913622 tttccgtcactaatttcccttcctaattttgcttttcctagt 16913581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 18787954 - 18787913
Alignment:
Q  23 cgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||| || |||||||||||||||| |||||||    
T  18787954 cgtcactaatttccatccctaattttgctttttcaagtagtg 18787913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 27253900 - 27253855
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| |||||| |||| |||||||| |||||||||||||||    
T  27253900 tttccgtcattaattttcctccctaatttttctttttctagtagtg 27253855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 39749027 - 39749072
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||| |||  ||||||||||||| |||||||||    
T  39749027 tttccgtcactaatttcgctccttaattttgcttttcctagtagtg 39749072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 7599 - 7643
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7599 tttccgtcactaatttccctcgctaattttgctttttctagtagt 7643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 7e-16; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 219730 - 219781
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtggattta 70  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  219730 tttccgtcactaatttccgtcgctaattttgctttttctagtagtgcattta 219781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 182624 - 182668
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagt 63  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  182624 tttccgtcactaatttccctcgctaattttactttttctagtagt 182668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 215708 - 215663
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||| |||||||| ||||||||||||||||||| ||||||||    
T  215708 tttccgtcgctaatttctctcgctaattttgctttttttagtagtg 215663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 6024 - 5978
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  6024 tttccgtcactaatttccctcgctaattttgttttttctagtagtgg 5978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 17662 - 17616
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtgg 65  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  17662 tttccgtcactaatttccctcgctaattttgttttttctagtagtgg 17616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 963 - 918
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  963 tttccgtcagtaatttccctcgctaattttgctttttctagtagtg 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 9274 - 9229
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9274 tttccgtcactaatttccctcactaattttgctttttctagtagtg 9229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 15035 - 14990
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  15035 tttcggtcactaatttccctcgctaattttgctttttctagtagtg 14990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 19697 - 19742
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  19697 tttccgtcactaatttcccttgctaattttgctttttctagtagtg 19742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 10708 - 10663
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  10708 tttccgtcactaatttccctcgctaattttgctttttctagcagtg 10663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 12746 - 12791
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  12746 tttccgtcactaatttccctcgctaattttgctttttcaagtagtg 12791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 39748 - 39703
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  39748 tttccatcactaatttccctcgctaattttgctttttctagtagtg 39703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 22309 - 22350
Alignment:
Q  23 cgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22309 cgtcactaatttccctcgctaattttgctttttctagtagtg 22350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 3836 - 3881
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  3836 tttccgtcactaattttcctcgctaattttgctttttctagtagtg 3881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 202868 - 202913
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  202868 tttccgtcactaatttccctcgctaatttttctttttctagtagtg 202913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 274710 - 274665
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  274710 tttccgtcactaatttccctcgctaattttgttttttctagtagtg 274665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 6889 - 6931
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagta 61  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  6889 tttccgtcaataatttccctcgctaattttgctttttctagta 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 9904 - 9949
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  9904 tttccttcactaatttcactcgctaattttgctttttctagtagtg 9949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 26577 - 26622
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  26577 tttccgtcactaatttccgtcactaattttgctttttctagtagtg 26622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 44011 - 44056
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  44011 tttccatcactaatttccctcgctaatttttctttttctagtagtg 44056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 74762 - 74720
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagta 61  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  74762 tttccgtcactaatttcccttgctaattttgccttttctagta 74720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 3207 - 3162
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||||    
T  3207 tttccgtcactaatttccctccctaatttttctttttctattagtg 3162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 37832 - 37787
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||    
T  37832 tttccgtcactaatttcccctgctaattttgttttttctagtagtg 37787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 58676 - 58721
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||    
T  58676 tttccgtcacaaatttccctccctaattttgcttttcctagtagtg 58721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 173540 - 173584
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||    
T  173540 tttccgtcactaatttcc-tcgctaattttgctttttctaatagtg 173584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 84719 - 84678
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagt 60  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  84719 tttctgtcactaatttccctcactaattttgctttttctagt 84678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 7550 - 7592
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagta 61  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||    
T  7550 tttccgtcactaattttcctcgttaattttactttttctagta 7592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 10252 - 10297
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||| |||||||||| |||||||||||||| |||| ||||    
T  10252 tttccgtcacaaatttccctccctaattttgcttttcctagcagtg 10297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 440057 - 440102
Alignment:
Q  19 tttccgtcactaatttccctcgctaattttgctttttctagtagtg 64  Q
    |||||||||||||| | ||| ||||||||| |||||||||||||||    
T  440057 tttccgtcactaatattccttgctaattttactttttctagtagtg 440102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University