View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1511_high_4 (Length: 814)

Name: NF1511_high_4
Description: NF1511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1511_high_4
NF1511_high_4
[»] chr5 (36 HSPs)
chr5 (18-386)||(930091-930465)
chr5 (388-716)||(930541-930888)
chr5 (410-533)||(27498808-27498931)
chr5 (426-533)||(19145505-19145611)
chr5 (386-533)||(15931056-15931202)
chr5 (410-535)||(8484738-8484863)
chr5 (439-533)||(32059547-32059640)
chr5 (462-531)||(2499307-2499376)
chr5 (484-533)||(12317301-12317350)
chr5 (484-535)||(4603772-4603823)
chr5 (484-535)||(38631112-38631163)
chr5 (439-533)||(25586929-25587022)
chr5 (439-533)||(31288053-31288146)
chr5 (439-533)||(34310139-34310232)
chr5 (484-533)||(13108600-13108649)
chr5 (484-533)||(22392698-22392747)
chr5 (484-532)||(15971273-15971321)
chr5 (486-533)||(23270675-23270722)
chr5 (484-535)||(25750762-25750813)
chr5 (439-533)||(11926609-11926702)
chr5 (439-533)||(15641212-15641305)
chr5 (484-533)||(7085777-7085826)
chr5 (484-533)||(13038605-13038654)
chr5 (479-532)||(21042671-21042724)
chr5 (484-533)||(36954815-36954864)
chr5 (484-531)||(3715060-3715107)
chr5 (439-533)||(11465014-11465107)
chr5 (484-535)||(22253296-22253347)
chr5 (437-543)||(27487660-27487765)
chr5 (439-526)||(33709608-33709694)
chr5 (483-533)||(30485825-30485875)
chr5 (479-533)||(40330630-40330684)
chr5 (484-533)||(1827681-1827730)
chr5 (741-794)||(15470597-15470650)
chr5 (484-533)||(16616116-16616165)
chr5 (484-533)||(34049819-34049868)
[»] chr2 (19 HSPs)
chr2 (25-387)||(19255817-19256168)
chr2 (439-533)||(8192458-8192551)
chr2 (439-535)||(4567544-4567639)
chr2 (420-528)||(4618773-4618880)
chr2 (386-533)||(15037956-15038103)
chr2 (410-533)||(44946130-44946253)
chr2 (439-533)||(32845088-32845181)
chr2 (439-532)||(17324764-17324856)
chr2 (484-533)||(18976576-18976625)
chr2 (484-533)||(27269501-27269550)
chr2 (443-533)||(33827684-33827773)
chr2 (484-533)||(11941361-11941410)
chr2 (460-533)||(32526212-32526285)
chr2 (439-532)||(44976261-44976353)
chr2 (484-532)||(4852556-4852604)
chr2 (484-531)||(41329842-41329889)
chr2 (439-533)||(41313989-41314082)
chr2 (439-513)||(43374432-43374505)
chr2 (437-533)||(36390673-36390766)
[»] chr1 (30 HSPs)
chr1 (410-533)||(32729542-32729664)
chr1 (439-533)||(168198-168291)
chr1 (439-533)||(4621344-4621437)
chr1 (439-533)||(15059509-15059602)
chr1 (439-533)||(24674390-24674483)
chr1 (439-533)||(46607807-46607900)
chr1 (439-532)||(24122021-24122113)
chr1 (386-533)||(8077644-8077791)
chr1 (426-533)||(24216975-24217081)
chr1 (439-533)||(7197353-7197446)
chr1 (385-533)||(1138576-1138724)
chr1 (484-533)||(34778339-34778388)
chr1 (484-532)||(2272342-2272390)
chr1 (746-794)||(30325024-30325072)
chr1 (438-533)||(20487296-20487390)
chr1 (439-533)||(23734113-23734206)
chr1 (439-533)||(23741305-23741398)
chr1 (443-533)||(29057448-29057537)
chr1 (484-533)||(27455017-27455066)
chr1 (463-532)||(37349521-37349590)
chr1 (410-525)||(1378903-1379018)
chr1 (439-531)||(46113509-46113600)
chr1 (485-533)||(47091687-47091735)
chr1 (463-535)||(52135125-52135197)
chr1 (443-533)||(1486417-1486504)
chr1 (443-533)||(14258538-14258627)
chr1 (439-533)||(7766834-7766927)
chr1 (439-533)||(30677173-30677266)
chr1 (484-533)||(18533875-18533924)
chr1 (439-512)||(45859150-45859222)
[»] scaffold0576 (1 HSPs)
scaffold0576 (439-533)||(5189-5282)
[»] chr8 (32 HSPs)
chr8 (439-533)||(3734730-3734823)
chr8 (439-533)||(4718646-4718739)
chr8 (426-535)||(34694670-34694778)
chr8 (439-535)||(27746442-27746537)
chr8 (439-533)||(34237762-34237855)
chr8 (484-533)||(20305909-20305958)
chr8 (484-533)||(21092542-21092591)
chr8 (439-531)||(28193477-28193568)
chr8 (426-533)||(26168942-26169048)
chr8 (439-533)||(39349257-39349350)
chr8 (484-533)||(2618187-2618236)
chr8 (484-533)||(18532108-18532157)
chr8 (484-533)||(19471610-19471659)
chr8 (484-533)||(19542534-19542583)
chr8 (484-533)||(19590113-19590162)
chr8 (424-528)||(41070767-41070870)
chr8 (410-531)||(264476-264597)
chr8 (410-531)||(651324-651445)
chr8 (410-531)||(837059-837180)
chr8 (439-541)||(15259513-15259614)
chr8 (484-533)||(42643269-42643318)
chr8 (426-534)||(8387538-8387645)
chr8 (439-523)||(21603241-21603324)
chr8 (439-535)||(34639314-34639408)
chr8 (484-535)||(8042653-8042704)
chr8 (484-535)||(21667549-21667600)
chr8 (398-532)||(22200625-22200758)
chr8 (490-533)||(42328006-42328049)
chr8 (439-533)||(28964034-28964127)
chr8 (757-786)||(3311514-3311543)
chr8 (426-535)||(3794790-3794898)
chr8 (484-533)||(7558094-7558143)
[»] chr7 (40 HSPs)
chr7 (439-533)||(2751272-2751365)
chr7 (386-533)||(7275278-7275425)
chr7 (439-533)||(7175969-7176062)
chr7 (439-533)||(40543017-40543110)
chr7 (484-533)||(17212054-17212103)
chr7 (439-532)||(22119890-22119982)
chr7 (439-531)||(42814867-42814958)
chr7 (426-533)||(8435789-8435895)
chr7 (426-533)||(12211629-12211735)
chr7 (426-533)||(21574196-21574303)
chr7 (426-533)||(23330833-23330939)
chr7 (439-533)||(2103056-2103149)
chr7 (439-533)||(18044108-18044201)
chr7 (439-533)||(21217940-21218033)
chr7 (487-533)||(25333420-25333466)
chr7 (479-532)||(577681-577734)
chr7 (484-533)||(2344300-2344349)
chr7 (484-533)||(19421232-19421281)
chr7 (484-533)||(23854397-23854446)
chr7 (441-533)||(11997850-11997941)
chr7 (484-532)||(13332574-13332622)
chr7 (439-535)||(21835150-21835245)
chr7 (439-531)||(28646972-28647063)
chr7 (439-533)||(22638293-22638386)
chr7 (484-531)||(27312155-27312202)
chr7 (484-535)||(28089815-28089866)
chr7 (439-533)||(7799939-7800032)
chr7 (439-533)||(10091189-10091282)
chr7 (420-532)||(3950876-3950988)
chr7 (439-532)||(22696322-22696414)
chr7 (484-533)||(31713046-31713095)
chr7 (486-533)||(27009360-27009407)
chr7 (486-533)||(31197592-31197639)
chr7 (483-533)||(21370598-21370648)
chr7 (463-533)||(40332100-40332170)
chr7 (463-532)||(1469114-1469183)
chr7 (741-786)||(12166156-12166201)
chr7 (460-533)||(22264629-22264702)
chr7 (484-533)||(32849592-32849641)
chr7 (484-525)||(42913664-42913705)
[»] chr6 (19 HSPs)
chr6 (439-533)||(15360205-15360298)
chr6 (426-533)||(9208249-9208355)
chr6 (439-533)||(34147343-34147436)
chr6 (439-533)||(34159959-34160052)
chr6 (439-533)||(9238972-9239065)
chr6 (439-533)||(33499471-33499565)
chr6 (439-533)||(12591634-12591727)
chr6 (484-533)||(22576064-22576113)
chr6 (439-533)||(3222742-3222834)
chr6 (484-535)||(9843933-9843984)
chr6 (439-530)||(11448871-11448961)
chr6 (461-531)||(8260486-8260556)
chr6 (484-533)||(13753237-13753286)
chr6 (484-533)||(21982471-21982520)
chr6 (439-533)||(8479309-8479402)
chr6 (487-533)||(21148664-21148710)
chr6 (484-533)||(11007162-11007211)
chr6 (424-533)||(17420862-17420971)
chr6 (484-533)||(28672064-28672113)
[»] chr4 (23 HSPs)
chr4 (439-533)||(25852211-25852304)
chr4 (441-533)||(13873404-13873495)
chr4 (439-533)||(27528902-27528995)
chr4 (439-533)||(40058959-40059052)
chr4 (439-533)||(46714389-46714483)
chr4 (439-533)||(54127449-54127542)
chr4 (386-535)||(20566344-20566494)
chr4 (439-532)||(34835527-34835619)
chr4 (460-532)||(42245744-42245816)
chr4 (484-531)||(34722169-34722216)
chr4 (439-533)||(32986194-32986287)
chr4 (486-533)||(5609355-5609402)
chr4 (426-533)||(41621690-41621796)
chr4 (439-533)||(33696386-33696479)
chr4 (439-533)||(52983616-52983709)
chr4 (484-533)||(1985833-1985882)
chr4 (484-533)||(19660683-19660732)
chr4 (484-532)||(45787855-45787902)
chr4 (486-533)||(35674894-35674941)
chr4 (439-533)||(22625177-22625270)
chr4 (439-533)||(34844865-34844958)
chr4 (484-526)||(35229172-35229214)
chr4 (484-530)||(55961893-55961939)
[»] chr3 (30 HSPs)
chr3 (483-533)||(55287800-55287850)
chr3 (437-533)||(30257621-30257716)
chr3 (439-533)||(8456257-8456350)
chr3 (439-533)||(30807260-30807353)
chr3 (439-533)||(35492908-35493001)
chr3 (439-533)||(53424283-53424376)
chr3 (437-533)||(40940822-40940917)
chr3 (439-533)||(7485632-7485725)
chr3 (439-533)||(40133556-40133649)
chr3 (439-533)||(46576345-46576438)
chr3 (439-533)||(48977385-48977478)
chr3 (484-533)||(34492726-34492775)
chr3 (484-533)||(45529905-45529954)
chr3 (484-535)||(25344208-25344259)
chr3 (484-531)||(25379760-25379807)
chr3 (439-533)||(45272523-45272616)
chr3 (439-533)||(25289821-25289914)
chr3 (444-533)||(4252508-4252596)
chr3 (484-533)||(21362940-21362989)
chr3 (484-533)||(31537989-31538038)
chr3 (741-786)||(32421422-32421467)
chr3 (484-533)||(50582989-50583038)
chr3 (484-533)||(52455800-52455849)
chr3 (460-532)||(4462631-4462703)
chr3 (428-531)||(55371381-55371483)
chr3 (439-529)||(26174114-26174203)
chr3 (439-533)||(49258369-49258462)
chr3 (435-517)||(51390942-51391023)
chr3 (439-517)||(53234017-53234094)
chr3 (437-535)||(53288817-53288914)
[»] scaffold0070 (1 HSPs)
scaffold0070 (439-533)||(40322-40415)
[»] scaffold0026 (1 HSPs)
scaffold0026 (439-533)||(97473-97566)
[»] scaffold0623 (1 HSPs)
scaffold0623 (439-532)||(1163-1255)
[»] scaffold0366 (2 HSPs)
scaffold0366 (439-532)||(9406-9498)
scaffold0366 (484-532)||(12151-12199)
[»] scaffold0199 (1 HSPs)
scaffold0199 (484-533)||(8558-8607)
[»] scaffold0459 (1 HSPs)
scaffold0459 (484-532)||(10844-10892)
[»] scaffold0460 (1 HSPs)
scaffold0460 (438-533)||(8285-8379)
[»] scaffold0328 (1 HSPs)
scaffold0328 (484-533)||(14988-15037)
[»] scaffold0068 (1 HSPs)
scaffold0068 (484-533)||(41795-41844)
[»] scaffold0051 (1 HSPs)
scaffold0051 (484-533)||(53022-53071)
[»] scaffold0028 (1 HSPs)
scaffold0028 (460-533)||(27773-27846)
[»] scaffold0217 (1 HSPs)
scaffold0217 (439-531)||(7416-7507)
[»] scaffold0049 (1 HSPs)
scaffold0049 (484-533)||(66759-66808)


Alignment Details
Target: chr5 (Bit Score: 320; Significance: 1e-180; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 18 - 386
Target Start/End: Original strand, 930091 - 930465
Alignment:
Q  18 ctataaggtacaattccctttaagttcttgggaatacctgttggcgcaaacccaagaagattattaacttaggaacctgtaattagttcattcaagtcta 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  930091 ctataaggtacaattccctttaagttcttgggaatacctgttggcgcaaacccaagaagattattgacttaggaacccgtaattagttcattcaagtcta 930190  T
Q  118 gattgtcgtcttttaaaggaagattattgtcaattggaggtcgagcgacattgatcagttccgacgtctcatcttcactgcctctttatttcttctcctt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  930191 gattgtcgtcttttaaaggaagattattgtcaattggaggtcgagcgacattgatcagttccgacgtctcatcttcactgcctctttatttcttctcctt 930290  T
Q  218 ctttaaagatcctaagaaagtcatatatttgctaacaaagatgcagagaagattcctatggcaaggagatgaggaaattaggaaaacatcatcggtttgt 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  930291 ctttaaagatcctaagaaagtcatatatttgctaacaaagatgcagagaagattcctatggcaaggagatgaggaaattatgaaaacatcatgggtttgt 930390  T
Q  318 tggaat------tgttaggacaaaaaagggggtgagttaggaataaaaaactttgaattgttcaatctcgcattg 386  Q
    ||||||      |||||||||||||||| ||| || |||||||||||||||||||||||||||||||||| ||||    
T  930391 tggaataaaatctgttaggacaaaaaagagggagatttaggaataaaaaactttgaattgttcaatctcggattg 930465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 388 - 716
Target Start/End: Original strand, 930541 - 930888
Alignment:
Q  388 ccacttacgagggctctgttctaagccatagcaagttatgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaagga 487  Q
    |||||| |||||||| |||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||    
T  930541 ccacttgcgagggct-tgttctaagccggagcaagctatgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaacctgagactttgagagga 930639  T
Q  488 gcaaactctaagattccaagccaaccactaagccaaccccaaatggatctcgtattgatattaaaatggtgttggatgatgcttaatgcaaacaaattct 587  Q
    ||||||||||| ||  |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  930640 gcaaactctaaaatctcaagccaaccactgggccaaccccaaatggatctcgtattgatattaaaatggtgttggatgatgcttaatgcaaacaaattct 930739  T
Q  588 caatttcaggtacgacaagattaaggattgggtaactgctgaacaaataagttttgatac----------ggtttctgaccctgaaacttttactctaac 677  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||          ||||||||||||||||||||||||||||||    
T  930740 caatttcatgtacgacaagattaagaattgggtaattgctgaacaaataagttttgatacgaagaattaaggtttctgaccctgaaacttttactctaac 930839  T
Q  678 atatgtact----------ggtggtgaccataagatcatcaaggcaaat 716  Q
    |||||||||          ||||||||||||||||||||||||| ||||    
T  930840 atatgtactctctggagggggtggtgaccataagatcatcaaggtaaat 930888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 410 - 533
Target Start/End: Original strand, 27498808 - 27498931
Alignment:
Q  410 aagccatagcaagttatgtatgaattt-gtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagc 508  Q
    |||||| |||||| |||||||| | || | |||||||||||||||||| | |||||||||||| ||||  |  | |||||||||||| ||||||||||||    
T  27498808 aagccagagcaagctatgtatggacttagcccaccgaaattggcacca-gagggaatcgaacctgagacctctagaggagcaaactccaagattccaagc 27498906  T
Q  509 caaccactaagccaaccccaaatgg 533  Q
    ||||||||| | |||||||||||||    
T  27498907 caaccactaggtcaaccccaaatgg 27498931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 426 - 533
Target Start/End: Original strand, 19145505 - 19145611
Alignment:
Q  426 tgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaacc 525  Q
    |||||| | ||| |||||||||||||||||| | |||||||||||| ||||  |||| ||||||| |||| ||||| ||||| ||||||||| |||||||    
T  19145505 tgtatggacttgcccaccgaaattggcacca-gagggaatcgaaccggagaccttgagaggagcatactccaagatcccaagtcaaccactaggccaacc 19145603  T
Q  526 ccaaatgg 533  Q
    ||||||||    
T  19145604 ccaaatgg 19145611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 386 - 533
Target Start/End: Complemental strand, 15931202 - 15931056
Alignment:
Q  386 gcccacttacgagggctctgttctaagccatagcaagttatgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaag 485  Q
    |||||||| |||| || |||||  |||||| |||| | | |||||| | ||  |||||||||||||||||| | |||||||||||| |||| ||   |||    
T  15931202 gcccacttgcgagagccctgtttaaagccagagcaggctctgtatggacttagccaccgaaattggcacca-gagggaatcgaacctgagacttgtgaag 15931104  T
Q  486 gagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
     ||||||||| ||||| |||||| |||||||| |||||||||||||||    
T  15931103 aagcaaactccaagatcccaagctaaccactaggccaaccccaaatgg 15931056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 410 - 535
Target Start/End: Original strand, 8484738 - 8484863
Alignment:
Q  410 aagccatagcaagttatgtatgaattt-gtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagc 508  Q
    |||||| |||||| | |||||||| || | |||||||||||||||||| | ||||||| |||| ||||  |    |||||||||||| ||||| ||||||    
T  8484738 aagccagagcaagctctgtatgaacttagcccaccgaaattggcacca-gagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagc 8484836  T
Q  509 caaccactaagccaaccccaaatggat 535  Q
    ||||||||| |||||||||||||||||    
T  8484837 caaccactaggccaaccccaaatggat 8484863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 32059547 - 32059640
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| |  ||||||||||| ||||  ||   |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  32059547 ccaccgaaattggcacca-gaaggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 32059640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 531
Target Start/End: Original strand, 2499307 - 2499376
Alignment:
Q  462 gaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaat 531  Q
    |||||||||| |||| ||||||||||||||| || ||||| ||||| || ||||||||||||||||||||    
T  2499307 gaatcgaacctgagactttgaaaggagcaaattccaagatcccaagtcagccactaagccaaccccaaat 2499376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 12317301 - 12317350
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  12317301 aggagcaaactccaagattccaagccaaccactaggccaaccccaaatgg 12317350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 535
Target Start/End: Complemental strand, 4603823 - 4603772
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  4603823 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatggat 4603772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 38631112 - 38631163
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  38631112 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatggat 38631163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 25587022 - 25586929
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | || ||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  25587022 ccaccgaaattggcacca-gaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 25586929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 31288053 - 31288146
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||||  |||||||||||  ||||  ||   |||||||||||| ||||| ||||||||||||||| |||||||| ||||||    
T  31288053 ccaccgaaattggcaccaaa-gggaatcgaacatgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacccaaaatgg 31288146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 34310232 - 34310139
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||| |||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||||||||||| ||||||| |||||||||||||||    
T  34310232 ccaccaaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagattccaagccgaccactaggccaaccccaaatgg 34310139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 13108600 - 13108649
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  13108600 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 13108649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 22392747 - 22392698
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  22392747 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 22392698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 532
Target Start/End: Original strand, 15971273 - 15971321
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  15971273 aggagcaaactccaagatcccaagccaaccactaagccaaccctaaatg 15971321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 486 - 533
Target Start/End: Original strand, 23270675 - 23270722
Alignment:
Q  486 gagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  23270675 gagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 23270722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 25750762 - 25750813
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    |||||||||||| ||||| ||||| ||||||||| |||||||||||||||||    
T  25750762 aggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatggat 25750813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 11926609 - 11926702
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | ||||||| |||| ||||  |    |||||||||||| ||||| |||| |||||||||| |||||||||||||||    
T  11926609 ccaccgaaattggcacca-gagggaatctaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 11926702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 15641212 - 15641305
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||| ||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| || ||||||||||||    
T  15641212 ccaccgaaattggctcca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggctaaccccaaatgg 15641305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 7085777 - 7085826
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||| |||||| ||||| |||||||||||||||||||| ||||||||||    
T  7085777 aggagaaaactccaagatcccaagccaaccactaagccagccccaaatgg 7085826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 13038605 - 13038654
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| |||| |||||||||| |||||||||||||||    
T  13038605 aggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 13038654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 532
Target Start/End: Original strand, 21042671 - 21042724
Alignment:
Q  479 ttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    ||||||||||||||||| ||||| |||| |||| |||||| |||||||||||||    
T  21042671 ttgaaaggagcaaactccaagatcccaaaccaatcactaaaccaaccccaaatg 21042724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 36954864 - 36954815
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||| ||||||||| |||||||||||||||    
T  36954864 aggagcaaactccaagatcccaaggcaaccactaggccaaccccaaatgg 36954815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 531
Target Start/End: Original strand, 3715060 - 3715107
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaat 531  Q
    |||||||||||| ||||| |||| |||||||||| |||||||||||||    
T  3715060 aggagcaaactccaagatcccaaaccaaccactaggccaaccccaaat 3715107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 11465014 - 11465107
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagaga-atttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||| |||||||||||| | || ||||||||| |||| ||||| | ||||||||||| |||||| |||||||| ||||| |||||||| ||||||    
T  11465014 ccaccaaaattggcacca-gaggaaatcgaacctgagacatttgga-ggagcaaactccaagatttcaagccaatcactaggccaacccgaaatgg 11465107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 22253296 - 22253347
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    ||||||||| || ||||| |||||||||||||||  ||||||||||||||||    
T  22253296 aggagcaaagtcaaagatcccaagccaaccactagaccaaccccaaatggat 22253347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 543
Target Start/End: Original strand, 27487660 - 27487765
Alignment:
Q  437 gtccaccgaaattggcaccaagtgggaatcgaaccagagaatt-tgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    ||||||||||||||||||||| ||||| || |||| ||||  | || ||| ||||||||| || || ||||  ||||||||| |||||||||||||||||    
T  27487660 gtccaccgaaattggcaccaaatggga-tcaaacctgagacctctggaag-agcaaactccaaaatcccaaatcaaccactaggccaaccccaaatggat 27487757  T
Q  536 ctcgtatt 543  Q
     |||||||    
T  27487758 ttcgtatt 27487765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 439 - 526
Target Start/End: Original strand, 33709608 - 33709694
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccc 526  Q
    |||||||||||||||||| | |||||||||||  ||||  |    |||||||||||| ||||| ||||||||||||||| ||||||||    
T  33709608 ccaccgaaattggcacca-gagggaatcgaacttgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccc 33709694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 483 - 533
Target Start/End: Complemental strand, 30485875 - 30485825
Alignment:
Q  483 aaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||||| ||||| ||||||||||| ||  |||||||||||||||    
T  30485875 aaggagcaaactccaagatcccaagccaaccgctgggccaaccccaaatgg 30485825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 533
Target Start/End: Complemental strand, 40330684 - 40330630
Alignment:
Q  479 ttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||| |||||||||||| |||||  ||||| |||||||||||||||| |||||||    
T  40330684 ttgagaggagcaaactccaagatctcaagctaaccactaagccaacctcaaatgg 40330630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 1827681 - 1827730
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| |||||  |||||||||||||| | |||||||||||||    
T  1827681 aggagcaaactccaagatctcaagccaaccactaggtcaaccccaaatgg 1827730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 741 - 794
Target Start/End: Original strand, 15470597 - 15470650
Alignment:
Q  741 gtcaggtagtttagtagctagaaaaattcatctttaagatgaataaatagggtg 794  Q
    |||| |||||||||| |||||| ||||||| ||| ||||||||||||| |||||    
T  15470597 gtcaagtagtttagtggctagagaaattcaccttaaagatgaataaatggggtg 15470650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 16616165 - 16616116
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| |||||||||| |||||||||| | |||||||    
T  16616165 aggagcaaactccaagatcccaagccaactactaagccaatctcaaatgg 16616116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 34049868 - 34049819
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| |||||||||| ||||  ||||||||||||||    
T  34049868 aggagcaaactccaagatcccaagccaactactagcccaaccccaaatgg 34049819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 1e-31; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 25 - 387
Target Start/End: Original strand, 19255817 - 19256168
Alignment:
Q  25 gtacaattccctttaagttcttgggaatacctgttggcgcaaacccaagaagattattaacttaggaacctgtaat-tagttcattcaagtctagattgt 123  Q
    ||||||| ||||||||||||||||||||| | ||| || |||| ||||||||||| | ||||||||||||||||||  | ||||||||||||||||||||    
T  19255817 gtacaatcccctttaagttcttgggaatatccgttcgcacaaatccaagaagattgtcaacttaggaacctgtaatccatttcattcaagtctagattgt 19255916  T
Q  124 cgtcttttaaaggaagattattgtcaattggaggtcgagcgacattgatcagttccgacgtctcatcttcactgcctctttatttcttctccttctttaa 223  Q
    | || |  ||||||||||| ||||||||  ||||| | ||||  |||||||  ||   | ||| ||||||| |||||| |||||||||||| |  |||||    
T  19255917 catcatggaaaggaagattcttgtcaatctgaggtagcgcgatgttgatcaactc---catcttatcttcattgcctccttatttcttctcatattttaa 19256013  T
Q  224 agatcctaagaaagtcatatatttgctaacaaagatgcagagaagattcctatggcaaggagatgaggaaattaggaaaacatcatcggtttgttggaa- 322  Q
    ||  |||| |||               ||| |||||| | ||||| |||||||||  |||||||||||||| |||||||||||||| ||||||||||||     
T  19256014 agcacctatgaa---------------aacgaagatggatagaaggttcctatggggaggagatgaggaaaataggaaaacatcatgggtttgttggaaa 19256098  T
Q  323 -----ttgttaggacaaaaaagggggtgagttaggaataaaaaactttgaattgttcaatctcgcattgc 387  Q
          |||||||| | ||||| | | || |||||| |||||||| |||||||||||||||| |||||||    
T  19256099 gaaatctgttaggatagaaaagagagagatttaggagtaaaaaaccttgaattgttcaatcttgcattgc 19256168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 8192458 - 8192551
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||| |||||||||| | |||||||||||| ||||  |||| ||||||| |||| ||||| ||||||||||||||| |||||||||||||||    
T  8192458 ccaccgacattggcacca-gagggaatcgaacctgagaccttgagaggagcacactccaagatcccaagccaaccactaggccaaccccaaatgg 8192551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 439 - 535
Target Start/End: Original strand, 4567544 - 4567639
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    |||||||||||||||||| | || ||||||||| |||| ||   ||||||||||||  ||||| |||||||||| |||| |||||||||||||||||    
T  4567544 ccaccgaaattggcacca-gaggaaatcgaacctgagacttctgaaggagcaaacttcaagatcccaagccaactactaggccaaccccaaatggat 4567639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 420 - 528
Target Start/End: Original strand, 4618773 - 4618880
Alignment:
Q  420 aagttatgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaag 519  Q
    ||||| |||||| | ||| || ||||||||||||||| | || ||||||||| || |  |||| ||||||| |||| ||||||||||||||||||||| |    
T  4618773 aagttttgtatggacttgcccgccgaaattggcaccagg-ggaaatcgaacctgaaaccttgagaggagcatactccaagattccaagccaaccactagg 4618871  T
Q  520 ccaacccca 528  Q
    |||||||||    
T  4618872 ccaacccca 4618880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 386 - 533
Target Start/End: Complemental strand, 15038103 - 15037956
Alignment:
Q  386 gcccacttacgagggctctgttctaagccatagcaagttatgtatgaattt-gtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaa 484  Q
    |||||||| || |||||| |||  |||||| |||||| | |||||| | || | |||||||||||||||||||  |||||||||||| ||||  ||   |    
T  15038103 gcccacttgcgggggctccgtttaaagccaaagcaagctctgtatggacttagcccaccgaaattggcaccaaa-gggaatcgaacctgagacctttgga 15038005  T
Q  485 ggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||| ||||| || || ||||||||| |||||||||||||||    
T  15038004 ggagcaaactccaagatcccgagtcaaccactaggccaaccccaaatgg 15037956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 410 - 533
Target Start/End: Original strand, 44946130 - 44946253
Alignment:
Q  410 aagccatagcaagttatgtatgaattt-gtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagc 508  Q
    |||||| |||||||| |||||| | || | |||||||||||||||||||  |||||||||||| ||||  |    |||||||||||| ||||| ||||||    
T  44946130 aagccagagcaagttctgtatggacttagcccaccgaaattggcaccaaa-gggaatcgaacctgagacctctggaggagcaaactccaagatcccaagc 44946228  T
Q  509 caaccactaagccaaccccaaatgg 533  Q
    |||||||||  ||||||||||||||    
T  44946229 caaccactagaccaaccccaaatgg 44946253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 32845181 - 32845088
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| || | |||   |||||||||||| ||||| |||||| ||| |||| |||||||||||||||    
T  32845181 ccaccgaaattggcacca-gagggaatcgaacctgaaacttttggaggagcaaactccaagatcccaagctaactactaggccaaccccaaatgg 32845088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 439 - 532
Target Start/End: Complemental strand, 17324856 - 17324764
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| |||| |||||||||| ||||||||||||||    
T  17324856 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagataccaaaccaaccactaggccaaccccaaatg 17324764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 18976576 - 18976625
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  18976576 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 18976625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 27269501 - 27269550
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  27269501 aggagcaaactcgaagatcccaagccaaccactatgccaaccccaaatgg 27269550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 443 - 533
Target Start/End: Original strand, 33827684 - 33827773
Alignment:
Q  443 cgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||| | |||||||||||| ||||  |    |||||||| ||| ||||| ||||||||||||||| |||||||||||||||    
T  33827684 cgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaatctccaagatcccaagccaaccactaggccaaccccaaatgg 33827773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 11941361 - 11941410
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| |||||||||||||||  ||||||||||||||    
T  11941361 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 11941410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 533
Target Start/End: Original strand, 32526212 - 32526285
Alignment:
Q  460 gggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||  |||| |||||||||||  ||||| ||||  |||||||||||||||| ||||||||    
T  32526212 gggaatcgaacctgagaccttgagaggagcaaacttcaagatcccaaatcaaccactaagccaactccaaatgg 32526285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 439 - 532
Target Start/End: Original strand, 44976261 - 44976353
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    ||||| |||||||||||| | |||||||||||| ||||  |    |||||||||| | ||||| ||||||||||||||| ||||||||||||||    
T  44976261 ccaccaaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaggccaaccccaaatg 44976353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 532
Target Start/End: Complemental strand, 4852604 - 4852556
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||||||||| ||||||||||| ||||||||| | ||||||||||||    
T  4852604 aggagcaaactccaagattccaagtcaaccactaggtcaaccccaaatg 4852556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 531
Target Start/End: Complemental strand, 41329889 - 41329842
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaat 531  Q
    |||||||||||||||||| |||| | |||||||| |||||||||||||    
T  41329889 aggagcaaactctaagatcccaaactaaccactaggccaaccccaaat 41329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 41314082 - 41313989
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| | |||||||||||| ||||  |    |||||||||||| ||||| |||| |||||||||| | |||||||||||||    
T  41314082 ccaccgaaattgacacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactacggcaaccccaaatgg 41313989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 513
Target Start/End: Original strand, 43374432 - 43374505
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaacc 513  Q
    |||||||||||||||||| | |||||||||||| ||||  |   ||||||||||||| ||||| |||||||||||    
T  43374432 ccaccgaaattggcacca-gagggaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaacc 43374505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 533
Target Start/End: Original strand, 36390673 - 36390766
Alignment:
Q  437 gtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||||| | || ||||||||| ||||  ||   || |||||||||  |||| |||| |||||||||| |||||||||||||||    
T  36390673 gtccaccgaaattggcacca-gaggaaatcgaacctgagacctttggagaagcaaactc--agatcccaaaccaaccactaggccaaccccaaatgg 36390766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 4e-25; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 410 - 533
Target Start/End: Complemental strand, 32729664 - 32729542
Alignment:
Q  410 aagccatagcaagttatgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagcc 509  Q
    |||||| |||||| | |||||| | ||| ||||||||||||||||||   |||||||||||| |||| ||||| |||||||||||| ||||| |||||||    
T  32729664 aagccagagcaagctctgtatggacttgcccaccgaaattggcaccata-gggaatcgaacctgagactttgagaggagcaaactcgaagatcccaagcc 32729566  T
Q  510 aaccactaagccaaccccaaatgg 533  Q
    |||||||| |||||||||||||||    
T  32729565 aaccactaggccaaccccaaatgg 32729542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 168291 - 168198
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaa-tttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  |||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  168291 ccaccgaaattggcacca-gagggaatcgaacctgagacctttgaaag-agcaaactctaagatcccaagccaaccactaggccaactccaaatgg 168198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 4621344 - 4621437
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  4621344 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 4621437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 15059509 - 15059602
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | | |||||||||| ||||  |    |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  15059509 ccaccgaaattggcacca-gagagaatcgaacctgagacctctggaggagcaaactccaagattccaagccaaccactaggccaaccccaaatgg 15059602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 24674483 - 24674390
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  24674483 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 24674390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 46607900 - 46607807
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  ||   |||||||||||| ||||| ||||| ||||||||| |||||||||||||||    
T  46607900 ccaccgaaattggcacca-gagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgg 46607807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 439 - 532
Target Start/End: Complemental strand, 24122113 - 24122021
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||| | ||||| ||||||||||||||||||||||||||||||    
T  24122113 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaagccaaccccaaatg 24122021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 386 - 533
Target Start/End: Complemental strand, 8077791 - 8077644
Alignment:
Q  386 gcccacttacgagggctctgttctaagccatagcaagttatgtatgaattt-gtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaa 484  Q
    |||||||| || |||| |||||  |||||| |||||| | |||||| | || | |||||||||||||||||| | | |||||||||| ||||  |    |    
T  8077791 gcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcacca-gagagaatcgaacctgagacctctgga 8077693  T
Q  485 ggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  8077692 ggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 8077644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 533
Target Start/End: Complemental strand, 24217081 - 24216975
Alignment:
Q  426 tgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaacc 525  Q
    |||||| ||||  |||||||||||||||||||  || ||||||||| ||||  |||| ||||||| |||| ||||| ||||| ||||||||| | |||||    
T  24217081 tgtatggatttacccaccgaaattggcaccaaa-ggtaatcgaacctgagaccttgagaggagcacactccaagatcccaagtcaaccactaggtcaacc 24216983  T
Q  526 ccaaatgg 533  Q
    ||||||||    
T  24216982 ccaaatgg 24216975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 7197353 - 7197446
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||||||| || | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  7197353 ccaccgaaattggcatca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 7197446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 385 - 533
Target Start/End: Complemental strand, 1138724 - 1138576
Alignment:
Q  385 tgcccacttacgagggctctgttctaagccatagcaa-gttatgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaa 483  Q
    ||||||||| | ||||| |||||||||| || ||||| | | |||||| | |||||||||||||||||||| | | | || |||||||  |||  ||||     
T  1138724 tgcccacttgcaagggccctgttctaagtcagagcaaagctctgtatggacttgtccaccgaaattggcacta-gagagattcgaacctaagaccttgag 1138626  T
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||| |||| |||||  |||||||||||||| | |||||||||||||    
T  1138625 aggagcacactccaagatctcaagccaaccactaggtcaaccccaaatgg 1138576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 34778388 - 34778339
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  34778388 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 34778339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 532
Target Start/End: Complemental strand, 2272390 - 2272342
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  2272390 aggagcaaactctaagatcccaagtcaaccactaggccaaccccaaatg 2272342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 746 - 794
Target Start/End: Original strand, 30325024 - 30325072
Alignment:
Q  746 gtagtttagtagctagaaaaattcatctttaagatgaataaatagggtg 794  Q
    |||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  30325024 gtagtttagtggctagagaaattcatcttaaagatgaataaatagggtg 30325072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 438 - 533
Target Start/End: Original strand, 20487296 - 20487390
Alignment:
Q  438 tccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||||||||||| | |||||||||||  ||||  |    |||||||||||| ||||| || ||||||||||||| ||||||||||||||    
T  20487296 tccaccgaaattggcacca-gagggaatcgaacttgagacctctggaggagcaaactccaagatcccgagccaaccactaaaccaaccccaaatgg 20487390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 23734206 - 23734113
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||||||| || | |||||||||||| ||||  |    ||||||||| |||||||| |||||||||| ||||| ||||||||||||||    
T  23734206 ccaccgaaattggcatca-gagggaatcgaacctgagacctctggaggagcaaattctaagatcccaagccaactactaaaccaaccccaaatgg 23734113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 23741398 - 23741305
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||||||| || | |||||||||||| ||||  |    ||||||||| |||||||| |||||||||| ||||| ||||||||||||||    
T  23741398 ccaccgaaattggcatca-gagggaatcgaacctgagacctctggaggagcaaattctaagatcccaagccaactactaaaccaaccccaaatgg 23741305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 443 - 533
Target Start/End: Original strand, 29057448 - 29057537
Alignment:
Q  443 cgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||| |||||||||||| ||||  ||   || ||||||||| ||||| |||| |||||||||| |||||||||||||||    
T  29057448 cgaaattggcac-aagagggaatcgaacctgagacctttggagcagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 29057537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 27455017 - 27455066
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| |||||||||||||||  ||||||||||||||    
T  27455017 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 27455066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 37349590 - 37349521
Alignment:
Q  463 aatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    ||||||||| ||||   ||| ||||||||||||||||||  |||| |||||||||| |||||||||||||    
T  37349590 aatcgaacctgagatcatgagaggagcaaactctaagatctcaagtcaaccactaaaccaaccccaaatg 37349521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 410 - 525
Target Start/End: Complemental strand, 1379018 - 1378903
Alignment:
Q  410 aagccatagcaagttatgtatgaattt-gtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagc 508  Q
    |||||| |||||||| |||||| | || | |||||||||||| ||||| | || ||||||||  |||| |||   |||||||||||| ||||| |||||     
T  1379018 aagccagagcaagttctgtatggacttagcccaccgaaattgacacca-gaggaaatcgaacatgagacttttggaggagcaaactccaagatcccaagt 1378920  T
Q  509 caaccactaagccaacc 525  Q
    |||||||||||||||||    
T  1378919 caaccactaagccaacc 1378903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 439 - 531
Target Start/End: Original strand, 46113509 - 46113600
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaat 531  Q
    ||||||||||||| |||| | |||||||||||| ||||  |    |||||||||||| ||||| |||| |||||||||| |||||||||||||    
T  46113509 ccaccgaaattggtacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaat 46113600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 485 - 533
Target Start/End: Complemental strand, 47091735 - 47091687
Alignment:
Q  485 ggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||| |||||  |||||||||||||| |||||||||||||||    
T  47091735 ggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgg 47091687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 535
Target Start/End: Complemental strand, 52135197 - 52135125
Alignment:
Q  463 aatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    ||||||||| ||||  |||| | |||||||||| ||||| ||||| |||||||||  ||||||||||||||||    
T  52135197 aatcgaacctgagacattgagatgagcaaactccaagatcccaagtcaaccactagaccaaccccaaatggat 52135125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 533
Target Start/End: Complemental strand, 1486504 - 1486417
Alignment:
Q  443 cgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||  |||||||||||| ||||  |||| || ||||  ||| ||||| ||||||||||||||| | |||||||||||||    
T  1486504 cgaaattggcaccaaa-gggaatcgaacctgagaccttgagagtagca--ctccaagatcccaagccaaccactaggtcaaccccaaatgg 1486417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 443 - 533
Target Start/End: Original strand, 14258538 - 14258627
Alignment:
Q  443 cgaaattggcaccaagtgggaatcgaaccagaga-atttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||| |||| | ||||||||||||||||| || ||  |||| ||||||| ||||| ||||||||||||||| ||||| |||||||||    
T  14258538 cgaaattggtacca-gagggaatcgaaccagagacatctg-gaggaacaaactccaagatcccaagccaaccactaggccaagcccaaatgg 14258627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 7766834 - 7766927
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||| |||||| | |||||||||||| ||||  |    |||||||||||| ||||| |||||| |||||||| ||||||||| |||||    
T  7766834 ccaccgaaattagcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagctaaccactaggccaaccccgaatgg 7766927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 30677266 - 30677173
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | ||||||| |||| ||||  ||   ||||||||||||  |||| |||| |||||||||| | |||||||||||||    
T  30677266 ccaccgaaattggcacca-gagggaatcaaacctgagacctttggaggagcaaactcctagatcccaaaccaaccactaggtcaaccccaaatgg 30677173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 18533875 - 18533924
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||||||||||  |||| ||||||||| | |||||||||||||    
T  18533875 aggagcaaactctaagatctcaagtcaaccactatgtcaaccccaaatgg 18533924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 512
Target Start/End: Original strand, 45859150 - 45859222
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaac 512  Q
    |||||||||||||||||| | |||||||||||| ||||  |  | |||||||||||| ||||| ||||||||||    
T  45859150 ccaccgaaattggcacca-gagggaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaac 45859222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 5189 - 5282
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  ||   |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  5189 ccaccgaaattggcacca-gagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 5282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 3734730 - 3734823
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  ||   |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  3734730 ccaccgaaattggcacca-gagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 3734823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 4718739 - 4718646
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  |   ||||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  4718739 ccaccgaaattggcacca-gagggaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 4718646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 426 - 535
Target Start/End: Original strand, 34694670 - 34694778
Alignment:
Q  426 tgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaacc 525  Q
    |||||||||||| ||||||||||||||||||  ||| |||||||||  |||  |||| |||||||||||| |||||  |||| |||||||||  ||||||    
T  34694670 tgtatgaatttgcccaccgaaattggcaccagatgg-aatcgaacctaagaccttgagaggagcaaactccaagatcacaagtcaaccactagaccaacc 34694768  T
Q  526 ccaaatggat 535  Q
    ||||||||||    
T  34694769 ccaaatggat 34694778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 439 - 535
Target Start/End: Original strand, 27746442 - 27746537
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    |||||||||||||||||||  |||||||||||| ||||  ||   |||||||||||| ||||| |||| |||||||||| |||||||||||||||||    
T  27746442 ccaccgaaattggcaccaaa-gggaatcgaacctgagacctttggaggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatggat 27746537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 34237762 - 34237855
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  34237762 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 34237855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 20305958 - 20305909
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  20305958 aggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgg 20305909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 21092591 - 21092542
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  21092591 aggagcaaactctaagatcccaagccaaccactaggccaaccccaaatgg 21092542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 439 - 531
Target Start/End: Complemental strand, 28193568 - 28193477
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaat 531  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  28193568 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 28193477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 533
Target Start/End: Original strand, 26168942 - 26169048
Alignment:
Q  426 tgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaacc 525  Q
    |||||||| ||| ||||||||||||||| || | || |||| |||| ||||  |||| |||||||||||| ||||| |||||| |||||||| |||||||    
T  26168942 tgtatgaacttgcccaccgaaattggcatcaggagg-aatcaaacctgagaccttgagaggagcaaactccaagatcccaagcaaaccactaggccaacc 26169040  T
Q  526 ccaaatgg 533  Q
    | ||||||    
T  26169041 ctaaatgg 26169048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 39349350 - 39349257
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||  |||||||||||||||    
T  39349350 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactgggccaaccccaaatgg 39349257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 2618236 - 2618187
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  2618236 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 2618187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 18532157 - 18532108
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  18532157 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 18532108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 19471659 - 19471610
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  19471659 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 19471610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 19542583 - 19542534
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  19542583 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 19542534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 19590113 - 19590162
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  19590113 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 19590162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 424 - 528
Target Start/End: Complemental strand, 41070870 - 41070767
Alignment:
Q  424 tatgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaa 523  Q
    |||||||||| ||| |||||||||||| ||||||  |||||||||||  ||||  |||| || |||| |||| ||||| ||||| ||||||||| |||||    
T  41070870 tatgtatgaacttgcccaccgaaattgacaccaaa-gggaatcgaacttgagaccttgagagtagcacactccaagatcccaagtcaaccactaggccaa 41070772  T
Q  524 cccca 528  Q
    |||||    
T  41070771 cccca 41070767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 410 - 531
Target Start/End: Original strand, 264476 - 264597
Alignment:
Q  410 aagccatagcaagttatgtat-gaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagc 508  Q
    |||||| |||||| ||||||| || || | |||||||||||||||| | | |||||||||||| ||||  |    |||||||||||| ||||| ||||||    
T  264476 aagccagagcaagctatgtatagacttagcccaccgaaattggcacta-gagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagc 264574  T
Q  509 caaccactaagccaaccccaaat 531  Q
    ||||||||| |||||| ||||||    
T  264575 caaccactaggccaacgccaaat 264597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 410 - 531
Target Start/End: Complemental strand, 651445 - 651324
Alignment:
Q  410 aagccatagcaagttatgtat-gaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagc 508  Q
    |||||| |||||| ||||||| || || | |||||||||||||||| | | |||||||||||| ||||  |    |||||||||||| ||||| ||||||    
T  651445 aagccagagcaagctatgtatagacttagcccaccgaaattggcacta-gagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagc 651347  T
Q  509 caaccactaagccaaccccaaat 531  Q
    ||||||||| |||||| ||||||    
T  651346 caaccactaggccaacgccaaat 651324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 410 - 531
Target Start/End: Complemental strand, 837180 - 837059
Alignment:
Q  410 aagccatagcaagttatgtat-gaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagc 508  Q
    |||||| |||||| ||||||| || || | |||||||||||||||| | | |||||||||||| ||||  |    |||||||||||| ||||| ||||||    
T  837180 aagccagagcaagctatgtatagacttagcccaccgaaattggcacta-gagggaatcgaacctgagatctctggaggagcaaactcgaagatcccaagc 837082  T
Q  509 caaccactaagccaaccccaaat 531  Q
    ||||||||| |||||| ||||||    
T  837081 caaccactaggccaacgccaaat 837059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 541
Target Start/End: Original strand, 15259513 - 15259614
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatggatctc 538  Q
    |||||||||||||||||| | |||||||||||| ||||  |    ||||||||| || ||||| |||| ||||||||||  |||||||||||||||| ||    
T  15259513 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaaatccaagatcccaaaccaaccactagaccaaccccaaatggatttc 15259611  T
Q  539 gta 541  Q
    |||    
T  15259612 gta 15259614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 42643269 - 42643318
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||| ||||||||| |||||||||||||||    
T  42643269 aggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgg 42643318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 426 - 534
Target Start/End: Original strand, 8387538 - 8387645
Alignment:
Q  426 tgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaacc 525  Q
    |||||| | ||| ||||| |||||||||||| | || ||||||||  ||||   ||| || |||||||||||||||  |||| ||||||||| |||||||    
T  8387538 tgtatggacttgcccaccaaaattggcacca-gaggaaatcgaacttgagaccctgagagaagcaaactctaagatctcaagacaaccactaggccaacc 8387636  T
Q  526 ccaaatgga 534  Q
    |||||||||    
T  8387637 ccaaatgga 8387645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 439 - 523
Target Start/End: Complemental strand, 21603324 - 21603241
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaa 523  Q
    ||||||||||||||||||   |||||||||||| ||||  |    |||||||||||||||||| ||||||||||||||| |||||    
T  21603324 ccaccgaaattggcaccata-gggaatcgaacctgagacctctggaggagcaaactctaagatcccaagccaaccactaggccaa 21603241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 439 - 535
Target Start/End: Original strand, 34639314 - 34639408
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    |||||||||||||||||| | |||| |||| || ||||  |||| ||||||| |||| ||||| |||||||||||||||  | ||||||||||||||    
T  34639314 ccaccgaaattggcacca-gaggga-tcgagcctgagaccttgagaggagcacactccaagatcccaagccaaccactagactaaccccaaatggat 34639408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 535
Target Start/End: Complemental strand, 8042704 - 8042653
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    |||||||||||| ||||| ||||||||| ||||| | |||||||||||||||    
T  8042704 aggagcaaactccaagatcccaagccaagcactaggtcaaccccaaatggat 8042653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 535
Target Start/End: Complemental strand, 21667600 - 21667549
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    |||||||| ||| |||||||||||||||||||||  |||||| |||||||||    
T  21667600 aggagcaacctccaagattccaagccaaccactagaccaacctcaaatggat 21667549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 532
Target Start/End: Original strand, 22200625 - 22200758
Alignment:
Q  398 gggctctgttctaagccatagcaa-gttatgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactct 496  Q
    |||||| ||||||||||| ||||| | | |||||||| || |||  |||||||||||| | | |||||||||||| |||| ||||| || || ||||||     
T  22200625 gggctccgttctaagccagagcaaagctctgtatgaacttttccctcgaaattggcacta-gagggaatcgaacctgagactttgagagaagtaaactcc 22200723  T
Q  497 aagattccaagccaaccactaagccaaccccaaatg 532  Q
    ||||| |||| |||||||| | ||||||| ||||||    
T  22200724 aagatcccaaaccaaccac-aggccaacctcaaatg 22200758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 490 - 533
Target Start/End: Complemental strand, 42328049 - 42328006
Alignment:
Q  490 aaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||    
T  42328049 aaactccaagatcccaagccaaccactaggccaaccccaaatgg 42328006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 28964127 - 28964034
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||||||||||  ||| ||||||||  || |  || | ||||||||||||||||||  ||| ||||||||||  ||||||||||||||    
T  28964127 ccaccgaaattggcaccagatgg-aatcgaacatgaaaccttaagaggagcaaactctaagatctcaaaccaaccactagaccaaccccaaatgg 28964034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 786
Target Start/End: Complemental strand, 3311543 - 3311514
Alignment:
Q  757 gctagaaaaattcatctttaagatgaataa 786  Q
    ||||||||||||||||||||||||||||||    
T  3311543 gctagaaaaattcatctttaagatgaataa 3311514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 426 - 535
Target Start/End: Complemental strand, 3794898 - 3794790
Alignment:
Q  426 tgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaacc 525  Q
    |||||||| ||| || ||||||||||||||| | ||||| |||||  ||||  |||| |||||||||||  ||||| | |||||||||| || | |||||    
T  3794898 tgtatgaacttgcccgccgaaattggcacca-gagggaaccgaacatgagaccttgagaggagcaaacttcaagatcctaagccaaccattaggtcaacc 3794800  T
Q  526 ccaaatggat 535  Q
     |||||||||    
T  3794799 acaaatggat 3794790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 7558094 - 7558143
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| |||||| ||| |||| |||||||||||||||    
T  7558094 aggagcaaactccaagatcccaagctaactactaggccaaccccaaatgg 7558143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 2751365 - 2751272
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  ||   |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  2751365 ccaccgaaattggcacca-gagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 2751272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 386 - 533
Target Start/End: Complemental strand, 7275425 - 7275278
Alignment:
Q  386 gcccacttacgagggctctgttctaagccatagcaagttatgtatgaattt-gtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaa 484  Q
    |||||||| || |||| |||||  |||||| |||||| | |||||| | || | |||||||||||||||||| | |||||||||||| ||||  |    |    
T  7275425 gcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcacca-gagggaatcgaacctgagacctctgga 7275327  T
Q  485 ggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  7275326 ggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 7275278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 7175969 - 7176062
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  7175969 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 7176062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 40543017 - 40543110
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  40543017 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 40543110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 17212103 - 17212054
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  17212103 aggagcaaactccaagatcccaagccaaccactaagccaaccccaaatgg 17212054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 439 - 532
Target Start/End: Complemental strand, 22119982 - 22119890
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  22119982 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 22119890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 439 - 531
Target Start/End: Complemental strand, 42814958 - 42814867
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaat 531  Q
    |||||||||||| ||||| | |||||||||||| |||| ||  | |||||||||||| ||||| ||||| |||||||||||||||| ||||||    
T  42814958 ccaccgaaattgacacca-gagggaatcgaacctgagacttcaagaggagcaaactccaagatcccaagtcaaccactaagccaactccaaat 42814867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 533
Target Start/End: Original strand, 8435789 - 8435895
Alignment:
Q  426 tgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaacc 525  Q
    |||||| | ||| |||||||||||||||||| | || |||||||||  |||  || |||||||||||||| ||||| ||||| |||||||||  ||||||    
T  8435789 tgtatggacttgcccaccgaaattggcacca-gaggaaatcgaacctaagatcttcaaaggagcaaactccaagatcccaagtcaaccactagaccaacc 8435887  T
Q  526 ccaaatgg 533  Q
    ||||||||    
T  8435888 ccaaatgg 8435895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 533
Target Start/End: Original strand, 12211629 - 12211735
Alignment:
Q  426 tgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaacc 525  Q
    |||||| | ||||||| |||||||||||||| | || |||| |||| ||||  |||| ||||||| |||| ||||| | ||||||||||||| |||||||    
T  12211629 tgtatggacttgtccatcgaaattggcacca-gaggaaatcaaacctgagatcttgagaggagcacactccaagatcctaagccaaccactaggccaacc 12211727  T
Q  526 ccaaatgg 533  Q
    ||||||||    
T  12211728 ccaaatgg 12211735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 533
Target Start/End: Original strand, 21574196 - 21574303
Alignment:
Q  426 tgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaacc 525  Q
    |||||| | ||| |||||||| ||||||||||  |||||||||||| | ||  |||| ||||||| |||| || || |||| |||||||||| |||||||    
T  21574196 tgtatggacttgcccaccgaagttggcaccaaaggggaatcgaacctgtgaccttgagaggagcacactccaaaatcccaaaccaaccactaggccaacc 21574295  T
Q  526 ccaaatgg 533  Q
    ||||||||    
T  21574296 ccaaatgg 21574303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 533
Target Start/End: Original strand, 23330833 - 23330939
Alignment:
Q  426 tgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaacc 525  Q
    |||||| | ||| |||||||||||||||||  | |||| ||||||| ||||  |||| ||||||| ||||||| || ||||||||||||||| || ||||    
T  23330833 tgtatggacttgcccaccgaaattggcaccg-gagggagtcgaacctgagaccttgagaggagcacactctaaaatcccaagccaaccactaggctaacc 23330931  T
Q  526 ccaaatgg 533  Q
    ||||||||    
T  23330932 ccaaatgg 23330939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 2103149 - 2103056
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||| ||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  2103149 ccaccgaaattggctcca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 2103056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 18044201 - 18044108
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||| ||| |||||||||||| | ||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  18044201 ccaccgaaattggcac-aagagggaatcgaacctgggacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 18044108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 21217940 - 21218033
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||||||| || | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  21217940 ccaccgaaattggcatca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 21218033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 533
Target Start/End: Complemental strand, 25333466 - 25333420
Alignment:
Q  487 agcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  25333466 agcaaactccaagatcccaagccaaccactaagccaaccccaaatgg 25333420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 479 - 532
Target Start/End: Complemental strand, 577734 - 577681
Alignment:
Q  479 ttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||| |||||||||||||||| |||||| |||||||| ||||||||||||||    
T  577734 ttgaaatgagcaaactctaagatcccaagcaaaccactaggccaaccccaaatg 577681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 2344349 - 2344300
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  2344349 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 2344300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 19421281 - 19421232
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  19421281 aggagcaaactccaagatcccaagccaaccactaagtcaaccccaaatgg 19421232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 23854446 - 23854397
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  23854446 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 23854397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 441 - 533
Target Start/End: Complemental strand, 11997941 - 11997850
Alignment:
Q  441 accgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||| | |||||||||||| ||||  |  | |||||||||||| ||||| |||||||||||||||  |||||| |||||||    
T  11997941 accgaaattggcacca-gagggaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagcccaaccacaaatgg 11997850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 532
Target Start/End: Original strand, 13332574 - 13332622
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  13332574 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 13332622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 439 - 535
Target Start/End: Complemental strand, 21835245 - 21835150
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| | |||||| ||||||||    
T  21835245 ccaccgaaattggcacca-gagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactaggtcaaccctaaatggat 21835150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 439 - 531
Target Start/End: Complemental strand, 28647063 - 28646972
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaat 531  Q
    |||||||||||||||||| | |||||||||||| ||||  |||| || |||| |||| ||||| ||||| ||| ||||| |||||||||||||    
T  28647063 ccaccgaaattggcacca-gagggaatcgaacctgagaccttgagagaagcacactccaagatcccaagtcaatcactaggccaaccccaaat 28646972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 22638386 - 22638293
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaa-tttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||| |||||| | |||||||||||| ||||  |||||||| |||||||||||||||  |||| |||||||||  ||||||||||||||    
T  22638386 ccaccgaaattagcacca-gagggaatcgaacctgagacctttgaaag-agcaaactctaagatctcaagtcaaccactagaccaaccccaaatgg 22638293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 484 - 531
Target Start/End: Complemental strand, 27312202 - 27312155
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaat 531  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  27312202 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 27312155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 484 - 535
Target Start/End: Complemental strand, 28089866 - 28089815
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    |||||||||||| |||||  |||||||||||||| |||||||||||||||||    
T  28089866 aggagcaaactccaagatctcaagccaaccactaggccaaccccaaatggat 28089815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 7799939 - 7800032
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||| ||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| | |||||||||||||    
T  7799939 ccactgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggtcaaccccaaatgg 7800032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 10091282 - 10091189
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||| ||| | |||||||||||| ||||  |    |||||||||||| ||||| |||||||||||||||  ||||||||||||||    
T  10091282 ccaccgaaattggctcca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 10091189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 532
Target Start/End: Original strand, 3950876 - 3950988
Alignment:
Q  420 aagttatgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattc-caagccaaccactaa 518  Q
    |||||||| ||| | ||||||||| ||||| |||||||  |||||||||||  ||||  |||| |||||||  ||| ||||||| ||||||||||||||     
T  3950876 aagttatgcatggacttgtccaccaaaattagcaccaaa-gggaatcgaacatgagacattgagaggagcacgctccaagattctcaagccaaccactag 3950974  T
Q  519 gccaaccccaaatg 532  Q
     |||||||||||||    
T  3950975 accaaccccaaatg 3950988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 439 - 532
Target Start/End: Complemental strand, 22696414 - 22696322
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    ||||||||||||||||| || ||||||| |||| ||||  |||| ||||||| |||| ||||| ||||  ||||||||| ||||||||| ||||    
T  22696414 ccaccgaaattggcacc-agagggaatcaaacctgagaccttgagaggagcacactccaagatcccaaatcaaccactaggccaacccctaatg 22696322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 31713046 - 31713095
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| |||| |||||||||| |||||||||||||||    
T  31713046 aggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 31713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 533
Target Start/End: Complemental strand, 27009407 - 27009360
Alignment:
Q  486 gagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||| ||||| | ||||||||||||| |||||||||||||||    
T  27009407 gagcaaactccaagatccgaagccaaccactaggccaaccccaaatgg 27009360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 533
Target Start/End: Complemental strand, 31197639 - 31197592
Alignment:
Q  486 gagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||| ||||| |||||||||||||||  ||||||||||||||    
T  31197639 gagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 31197592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 483 - 533
Target Start/End: Complemental strand, 21370648 - 21370598
Alignment:
Q  483 aaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||| |||||| ||||| |||| |||||||||| |||||||||||||||    
T  21370648 aaggagtaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 21370598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 463 - 533
Target Start/End: Complemental strand, 40332170 - 40332100
Alignment:
Q  463 aatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||| ||||  || | |||||||||||| |||||| ||||||||||||||  ||||| ||||||||    
T  40332170 aatcgaacctgagacctttagaggagcaaactccaagatttcaagccaaccactagaccaactccaaatgg 40332100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 463 - 532
Target Start/End: Complemental strand, 1469183 - 1469114
Alignment:
Q  463 aatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    ||||||||| ||||  |||| | || ||||||| |||||| |||| ||||||||| ||||||||||||||    
T  1469183 aatcgaacctgagaccttgagatgaacaaactccaagatttcaagtcaaccactaggccaaccccaaatg 1469114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 741 - 786
Target Start/End: Complemental strand, 12166201 - 12166156
Alignment:
Q  741 gtcaggtagtttagtagctagaaaaattcatctttaagatgaataa 786  Q
    |||| ||||||||||||||||| ||||||| ||| |||||||||||    
T  12166201 gtcaagtagtttagtagctagagaaattcaccttaaagatgaataa 12166156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 533
Target Start/End: Original strand, 22264629 - 22264702
Alignment:
Q  460 gggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||| | ||||  |||| |||||||||||| |||||||||| ||||||  |  |||||||||||||||    
T  22264629 gggaatcgaatctgagaccttgagaggagcaaactccaagattccaaaccaacccttcggccaaccccaaatgg 22264702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 32849641 - 32849592
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||| ||||||||| || ||||||||||||    
T  32849641 aggagcaaactccaagatcccaagtcaaccactaggctaaccccaaatgg 32849592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Original strand, 42913664 - 42913705
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaacc 525  Q
    |||||||||||| ||||| ||||||||||||||| |||||||    
T  42913664 aggagcaaactccaagatcccaagccaaccactaggccaacc 42913705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 2e-17; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 15360205 - 15360298
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  ||   |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  15360205 ccaccgaaattggcacca-gagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 15360298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 426 - 533
Target Start/End: Complemental strand, 9208355 - 9208249
Alignment:
Q  426 tgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaacc 525  Q
    |||||| | ||| |||||||||||||||||| | |||||||||||| ||||  |||| |||||||||||| ||||| |||| ||||||||||   |||||    
T  9208355 tgtatggacttgcccaccgaaattggcaccagg-gggaatcgaacctgagaccttgagaggagcaaactccaagatcccaatccaaccactagaacaacc 9208257  T
Q  526 ccaaatgg 533  Q
    ||||||||    
T  9208256 ccaaatgg 9208249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 34147436 - 34147343
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatt-tgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| |||| || || ||| ||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  34147436 ccaccgaaattggcacca-gagggaatcgaacctgagacttctggaag-agcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 34147343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 34160052 - 34159959
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatt-tgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| |||| || || ||| ||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  34160052 ccaccgaaattggcacca-gagggaatcgaacctgagacttctggaag-agcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 34159959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 9239065 - 9238972
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  9239065 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 9238972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 33499565 - 33499471
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatc-gaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| | ||||||| ||||| ||||  |||| |||||||||||| ||||| ||||||||||||| | |||||||||||||||    
T  33499565 ccaccgaaattgacacca-gagggaatctgaacctgagaccttgagaggagcaaactccaagatcccaagccaaccaccaggccaaccccaaatgg 33499471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 12591727 - 12591634
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||| ||||||||||| | | |||||||||||| ||||  ||   |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  12591727 ccactgaaattggcacga-gagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 12591634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 22576113 - 22576064
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  22576113 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 22576064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 3222742 - 3222834
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatt-tgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  | |||  ||||||||||  ||||| ||||||||||||||| |||||||||||||||    
T  3222742 ccaccgaaattggcacca-gagggaatcgaacctgagacctctga--ggagcaaactgcaagatcccaagccaaccactaggccaaccccaaatgg 3222834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 484 - 535
Target Start/End: Complemental strand, 9843984 - 9843933
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    |||||||||||| ||||| |||||||||||||||  ||||||||||||||||    
T  9843984 aggagcaaactccaagatcccaagccaaccactagaccaaccccaaatggat 9843933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 439 - 530
Target Start/End: Complemental strand, 11448961 - 11448871
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaa 530  Q
    |||||||||||||||||| | | |||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  11448961 ccaccgaaattggcacca-gagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaa 11448871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 461 - 531
Target Start/End: Original strand, 8260486 - 8260556
Alignment:
Q  461 ggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaat 531  Q
    ||||||||| | ||||  || ||||| |||||||||||||||| ||  |||||||||||||||||||||||    
T  8260486 ggaatcgaagctgagaccttaaaaggggcaaactctaagattcaaactcaaccactaagccaaccccaaat 8260556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 13753286 - 13753237
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| | ||||||||||||| |||||||||||||||    
T  13753286 aggagcaaactccaagatccaaagccaaccactaggccaaccccaaatgg 13753237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 21982471 - 21982520
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||  ||||| ||||||||||||||| |||||||||||||||    
T  21982471 aggagcaaacttcaagatcccaagccaaccactaggccaaccccaaatgg 21982520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 8479402 - 8479309
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| | || ||||||||| || |  || | ||||||| |||| ||||| ||||| ||||||||| |||||||||||||||    
T  8479402 ccaccgaaattgacacca-gaggaaatcgaacctgaaatcttaagaggagcacactccaagatcccaagtcaaccactaggccaaccccaaatgg 8479309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 487 - 533
Target Start/End: Original strand, 21148664 - 21148710
Alignment:
Q  487 agcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||| ||||| ||||||||||||||| |||||| ||||||||    
T  21148664 agcaaactccaagatcccaagccaaccactaggccaactccaaatgg 21148710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 11007211 - 11007162
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| |||||||||||||||   |||||||||||||    
T  11007211 aggagcaaactccaagatcccaagccaaccactagatcaaccccaaatgg 11007162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 424 - 533
Target Start/End: Complemental strand, 17420971 - 17420862
Alignment:
Q  424 tatgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaa 523  Q
    |||||||||| ||  |||||||||||||||| |   ||||||| ||||| |||  |||||||||| | |||| ||||| ||||| |||||| ||  ||||    
T  17420971 tatgtatgaacttacccaccgaaattggcacaagaggggaatcaaaccaaagaccttgaaaggagtacactccaagatcccaagtcaaccattagaccaa 17420872  T
Q  524 ccccaaatgg 533  Q
    |||| |||||    
T  17420871 ccccgaatgg 17420862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 28672113 - 28672064
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| |||||  |||| ||||||||| |||||||||||||||    
T  28672113 aggagcaaactccaagatctcaagtcaaccactaggccaaccccaaatgg 28672064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 25852304 - 25852211
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  ||   |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  25852304 ccaccgaaattggcacca-gagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 25852211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 441 - 533
Target Start/End: Original strand, 13873404 - 13873495
Alignment:
Q  441 accgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||| | |||||||||||| ||||  ||  ||||||||||||| ||||| |||||| |||||||| |||||||||||||||    
T  13873404 accgaaattggcacca-gagggaatcgaacctgagacctttgaaggagcaaactccaagatcccaagcaaaccactaggccaaccccaaatgg 13873495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 27528902 - 27528995
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  27528902 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaaccccagatgg 27528995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 40058959 - 40059052
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | | |||||||||| ||||  |  | |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  40058959 ccaccgaaattggcacca-gagagaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 40059052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 46714483 - 46714389
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||||  || ||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  46714483 ccaccgaaattggcaccaaagggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 46714389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 54127449 - 54127542
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||| ||| |||||| ||||| ||||  ||   |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  54127449 ccaccgaaattggcac-aagagggaattgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 54127542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 535
Target Start/End: Complemental strand, 20566494 - 20566344
Alignment:
Q  386 gcccacttacgagggctctgttctaagccatagcaagttatgtatgaa-tttgtccaccgaaattggcaccaagtgggaatcgaaccagagaa--tttga 482  Q
    |||||||| || |||||| |||  |||||| |||||| | |||||| | |||| |||||||||||||||||| | |||||||||||| ||  |  | ||     
T  20566494 gcccacttgcgggggctccgtttaaagccagagcaagctctgtatggactttgcccaccgaaattggcacca-gagggaatcgaacctgatcacctctgg 20566396  T
Q  483 aaggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    | ||||||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  20566395 a-ggagcaaactccaagatcccaagccaaccactaggccaaccccaaatggat 20566344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 439 - 532
Target Start/End: Complemental strand, 34835619 - 34835527
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||||||||| ||||| | |||||||||||  ||||  || | |||||||||||||||||| |||||||||||||||  |||||||||||||    
T  34835619 ccaccgaaattgacacca-gagggaatcgaacatgagaccttaagaggagcaaactctaagatcccaagccaaccactagaccaaccccaaatg 34835527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 460 - 532
Target Start/End: Complemental strand, 42245816 - 42245744
Alignment:
Q  460 gggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||||||||| ||||  || | |||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  42245816 gggaatcgaacccgagacctttagaggagcaaactctaagatcccaagtcaaccactaggccaaccccaaatg 42245744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 531
Target Start/End: Complemental strand, 34722216 - 34722169
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaat 531  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  34722216 aggagcaaactccaagatcccaagccaaccactaagccaaccccaaat 34722169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 32986287 - 32986194
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||| ||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  32986287 ccaccgaaattggcacca-gagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 32986194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 486 - 533
Target Start/End: Original strand, 5609355 - 5609402
Alignment:
Q  486 gagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  5609355 gagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 5609402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 426 - 533
Target Start/End: Original strand, 41621690 - 41621796
Alignment:
Q  426 tgtatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaacc 525  Q
    |||||| ||||| ||||| |||||||||||| | || |||| |||  ||||  |||| |||||||||||| |||||  ||||||||||| || |||||||    
T  41621690 tgtatggatttgcccaccaaaattggcacca-gaggaaatcaaacatgagaccttgagaggagcaaactccaagatctcaagccaaccattaggccaacc 41621788  T
Q  526 ccaaatgg 533  Q
    ||||||||    
T  41621789 ccaaatgg 41621796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 33696386 - 33696479
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||| ||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||| ||||||    
T  33696386 ccaccgaaattggcacca-gagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccctaaatgg 33696479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 52983709 - 52983616
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||| ||||||||||||| | |||||||||||| ||||  |    |||||||||||| |||||  |||||||||||||| |||||||||||||||    
T  52983709 ccactgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaaccccaaatgg 52983616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 1985882 - 1985833
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| ||||| |||||||||    
T  1985882 aggagcaaactccaagatcccaagccaaccactaggccaatcccaaatgg 1985833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 19660683 - 19660732
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||| ||||||||    
T  19660683 aggagcaaactccaagatcccaagccaaccactaggccaactccaaatgg 19660732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 532
Target Start/End: Original strand, 45787855 - 45787902
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    ||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  45787855 aggagcaaa-tccaagattccaagccaaccactaggccaaccccaaatg 45787902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 533
Target Start/End: Original strand, 35674894 - 35674941
Alignment:
Q  486 gagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||| ||||| ||||||||||||||  |||||||||||||||    
T  35674894 gagcaaactccaagatcccaagccaaccacttggccaaccccaaatgg 35674941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 22625177 - 22625270
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||| ||| | |||||||||||| ||||  |    ||||| |||||| ||||| ||||||||||||||| ||||||| |||||||    
T  22625177 ccaccgaaattggctcca-gagggaatcgaacctgagacctctggaggagtaaactccaagatcccaagccaaccactaggccaacctcaaatgg 22625270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 34844865 - 34844958
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | | |||||||||| ||||  |    |||||||||||| |||||  ||||| |||||||| |||||||||||||||    
T  34844865 ccaccgaaattggcacca-gagagaatcgaacctgagacctctggaggagcaaactccaagatctcaagcaaaccactaggccaaccccaaatgg 34844958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 484 - 526
Target Start/End: Complemental strand, 35229214 - 35229172
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccc 526  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||    
T  35229214 aggagcaaactccaagatcccaagccaaccactaggccaaccc 35229172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 484 - 530
Target Start/End: Original strand, 55961893 - 55961939
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaa 530  Q
    |||||||||||| ||||| ||||||||||||||| ||||| ||||||    
T  55961893 aggagcaaactccaagatcccaagccaaccactaggccaatcccaaa 55961939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 533
Target Start/End: Complemental strand, 55287850 - 55287800
Alignment:
Q  483 aaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  55287850 aaggagcaaactctaagattccaagccaaccactatgccaaccccaaatgg 55287800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 437 - 533
Target Start/End: Complemental strand, 30257716 - 30257621
Alignment:
Q  437 gtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||| |||||||||||||||  |||||||||||| ||||  ||   |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  30257716 gtccatcgaaattggcaccaaa-gggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 30257621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 8456257 - 8456350
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  8456257 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactcgaagatcccaagccaaccactaggccaaccccaaatgg 8456350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 30807260 - 30807353
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  30807260 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 30807353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 35493001 - 35492908
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  35493001 ccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 35492908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 53424283 - 53424376
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||||  |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  53424283 ccaccgaaattggcaccaaa-gggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 53424376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 437 - 533
Target Start/End: Complemental strand, 40940917 - 40940822
Alignment:
Q  437 gtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| |||||||||||||||  ||||||||||||||    
T  40940917 gtccaccgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 40940822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 7485632 - 7485725
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||||||| || | |||||||||||| ||||  ||   |||||||||||| ||||| ||||| ||||||||| |||||||||||||||    
T  7485632 ccaccgaaattggcatca-gagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactatgccaaccccaaatgg 7485725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 40133556 - 40133649
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| | |||||||||||| ||||  ||   |||||||||||| || || ||||||||||||||| |||||||||||||||    
T  40133556 ccaccgaaattgacacca-gagggaatcgaacctgagacctttggaggagcaaactccaaaatcccaagccaaccactaggccaaccccaaatgg 40133649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 46576438 - 46576345
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||| ||||||||||||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  46576438 ccactgaaattggcacca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 46576345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 48977478 - 48977385
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| |  ||||||||||| ||||  ||   |||||||||||| ||||| ||||| ||||||||| |||||||||||||||    
T  48977478 ccaccgaaattggcacca-gaaggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgg 48977385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 34492726 - 34492775
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  34492726 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 34492775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 45529905 - 45529954
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  45529905 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 45529954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 484 - 535
Target Start/End: Original strand, 25344208 - 25344259
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    |||||||||||| ||||| ||||| ||||||||| |||||||||||||||||    
T  25344208 aggagcaaactcgaagatcccaagtcaaccactaggccaaccccaaatggat 25344259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 484 - 531
Target Start/End: Complemental strand, 25379807 - 25379760
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaat 531  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  25379807 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaat 25379760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 45272523 - 45272616
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagaga-atttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||| | |||| || || | ||||||||||| ||||| |||||||||| |||| |||||||||||||||    
T  45272523 ccaccgaaattggcacca-gagggaatcgaaactgagacatctgga-ggagcaaactccaagatcccaagccaacgactaggccaaccccaaatgg 45272616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 25289821 - 25289914
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||| | | |||||||||||| ||||  |    |||||||||||| ||||| |||||||||||||||  ||||||||||||||    
T  25289821 ccaccgaaattggcacta-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaaccccaaatgg 25289914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 444 - 533
Target Start/End: Original strand, 4252508 - 4252596
Alignment:
Q  444 gaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||||| | ||||||| |||  ||||  |||| ||||||| |||| |||||  |||||||||||||| |||||||||||||||    
T  4252508 gaaattggcacca-gagggaatcaaacttgagaccttgagaggagcacactccaagatctcaagccaaccactaggccaaccccaaatgg 4252596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 21362989 - 21362940
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||| ||||||||| |||||||||||||||    
T  21362989 aggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgg 21362940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 31537989 - 31538038
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| | ||||||||||||| |||||||||||||||    
T  31537989 aggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgg 31538038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 741 - 786
Target Start/End: Complemental strand, 32421467 - 32421422
Alignment:
Q  741 gtcaggtagtttagtagctagaaaaattcatctttaagatgaataa 786  Q
    |||| |||||||||| |||||||||||||||||| |||||||||||    
T  32421467 gtcaagtagtttagtggctagaaaaattcatcttaaagatgaataa 32421422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 50583038 - 50582989
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| |||| |||||||||| |||||||||||||||    
T  50583038 aggagcaaactccaagatcccaaaccaaccactaggccaaccccaaatgg 50582989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 52455800 - 52455849
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| || |||||||||||| |||||||||||||||    
T  52455800 aggagcaaactccaagatccctagccaaccactaggccaaccccaaatgg 52455849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 460 - 532
Target Start/End: Complemental strand, 4462703 - 4462631
Alignment:
Q  460 gggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||||||||  |||| |||  ||| ||||||||| |||||  |||||||||||||| ||||||||||||||    
T  4462703 gggaatcgaacatgagacttttgaagtagcaaactccaagatctcaagccaaccactaggccaaccccaaatg 4462631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 428 - 531
Target Start/End: Original strand, 55371381 - 55371483
Alignment:
Q  428 tatgaatttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaacccc 527  Q
    |||||| |||||| ||||||||||||||||  |||||||||||  ||||  |||| || |||| |||| || ||  |||||||||||||| ||||||| |    
T  55371381 tatgaacttgtccgccgaaattggcaccaa-agggaatcgaacatgagaccttgagagaagcatactccaaaatcgcaagccaaccactaggccaacctc 55371479  T
Q  528 aaat 531  Q
    ||||    
T  55371480 aaat 55371483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 529
Target Start/End: Complemental strand, 26174203 - 26174114
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaa 529  Q
    |||||||||||||||||| | || ||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| |||||| ||||    
T  26174203 ccaccgaaattggcacca-gaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaactccaa 26174114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 49258369 - 49258462
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||| | | |||||||||||| ||||  |    |||||||||||  ||||| ||||||||||||||| || ||||||||||||    
T  49258369 ccaccgaaattggcacta-gagggaatcgaacctgagacctctggaggagcaaactgcaagatcccaagccaaccactaggcaaaccccaaatgg 49258462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 435 - 517
Target Start/End: Original strand, 51390942 - 51391023
Alignment:
Q  435 ttgtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccacta 517  Q
    ||||| |||||||||||||| ||| |||||| |||   ||||  |||| ||||||||||||||||||  ||||||||||||||    
T  51390942 ttgtctaccgaaattggcac-aagagggaattgaaattgagatcttgagaggagcaaactctaagatctcaagccaaccacta 51391023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 517
Target Start/End: Original strand, 53234017 - 53234094
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccacta 517  Q
    |||||||||||||||||| | | |||||||||| |||| ||    |||||||||||| ||||| |||||||||||||||    
T  53234017 ccaccgaaattggcacca-gagagaatcgaacctgagacttctggaggagcaaactccaagatcccaagccaaccacta 53234094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 437 - 535
Target Start/End: Original strand, 53288817 - 53288914
Alignment:
Q  437 gtccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatggat 535  Q
    |||||||||||||||||||| | ||||||||| || ||||  ||   ||||||||||||||| || |||| |||||||||  |||||| | ||||||||    
T  53288817 gtccaccgaaattggcacca-gagggaatcgagcctgagacctttggaggagcaaactctaatatcccaaaccaaccacttggccaacgcaaaatggat 53288914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Complemental strand, 40415 - 40322
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  |   ||||||||||||| ||||| | ||||||||||||| |||||||||||||||    
T  40415 ccaccgaaattggcacca-gagggaatcgaacctgagacctctgaaggagcaaactccaagatcctaagccaaccactaggccaaccccaaatgg 40322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 439 - 533
Target Start/End: Original strand, 97473 - 97566
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||||||||| | |||||||||||| ||||  ||   |||||||||||  ||||| ||||||||||||||| |||||||||||||||    
T  97473 ccaccgaaattggcacca-gagggaatcgaacctgagacctttggaggagcaaactacaagatcccaagccaaccactaggccaaccccaaatgg 97566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 439 - 532
Target Start/End: Original strand, 1163 - 1255
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||||||||||| ||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  1163 ccaccgaaattggctcca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 1255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 439 - 532
Target Start/End: Original strand, 9406 - 9498
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||||||||||| ||| | |||||||||||| ||||  |    |||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  9406 ccaccgaaattggctcca-gagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 9498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 532
Target Start/End: Original strand, 12151 - 12199
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  12151 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 12199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 8558 - 8607
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  8558 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatgg 8607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 532
Target Start/End: Original strand, 10844 - 10892
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatg 532  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  10844 aggagcaaactccaagatcccaagccaaccactaggccaaccccaaatg 10892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 438 - 533
Target Start/End: Original strand, 8285 - 8379
Alignment:
Q  438 tccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    ||||||||||||||||||| | |||||||||||  ||||  |    |||||||||||| ||||| || ||||||||||||| ||||||||||||||    
T  8285 tccaccgaaattggcacca-gagggaatcgaacttgagacctctggaggagcaaactccaagatcccgagccaaccactaaaccaaccccaaatgg 8379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 15037 - 14988
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||| ||||||||||| |||||||||||||||    
T  15037 aggagcaaactccaagatcccaggccaaccactaggccaaccccaaatgg 14988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 41795 - 41844
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||| ||||||||| |||||||||||||||    
T  41795 aggagcaaactccaagatcccaagtcaaccactaggccaaccccaaatgg 41844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 533
Target Start/End: Original strand, 53022 - 53071
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| ||||||||||||||| ||||| |||||||||    
T  53022 aggagcaaactccaagatcccaagccaaccactaggccaatcccaaatgg 53071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 533
Target Start/End: Complemental strand, 27846 - 27773
Alignment:
Q  460 gggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||  |||| |||||||||||| || || |||| ||||||||||  ||||||||||||||    
T  27846 gggaatcgaacccgagaccttgagaggagcaaactccaaaatcccaaaccaaccactagaccaaccccaaatgg 27773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 439 - 531
Target Start/End: Original strand, 7416 - 7507
Alignment:
Q  439 ccaccgaaattggcaccaagtgggaatcgaaccagagaatttgaaaggagcaaactctaagattccaagccaaccactaagccaaccccaaat 531  Q
    |||||||||||||||||  | |||||||||||| ||||  |    |||||||||||| ||||| |||||||||| |||| |||||||||||||    
T  7416 ccaccgaaattggcaccg-gagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaactactaggccaaccccaaat 7507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 66808 - 66759
Alignment:
Q  484 aggagcaaactctaagattccaagccaaccactaagccaaccccaaatgg 533  Q
    |||||||||||| ||||| |||||||||||||||  |||| |||||||||    
T  66808 aggagcaaactccaagatcccaagccaaccactagaccaatcccaaatgg 66759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University