View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1511_high_41 (Length: 436)

Name: NF1511_high_41
Description: NF1511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1511_high_41
NF1511_high_41
[»] chr6 (62 HSPs)
chr6 (20-421)||(32298403-32298811)
chr6 (20-122)||(32299650-32299753)
chr6 (213-287)||(7265589-7265663)
chr6 (198-291)||(19040337-19040430)
chr6 (213-296)||(5732506-5732589)
chr6 (170-296)||(7977783-7977909)
chr6 (217-287)||(9027167-9027237)
chr6 (181-275)||(32511630-32511724)
chr6 (180-287)||(9658868-9658975)
chr6 (217-279)||(7151409-7151471)
chr6 (217-287)||(34073347-34073417)
chr6 (198-278)||(31579208-31579286)
chr6 (207-275)||(7377980-7378048)
chr6 (217-289)||(10294094-10294166)
chr6 (219-270)||(7086801-7086852)
chr6 (196-287)||(17841568-17841659)
chr6 (170-285)||(33001242-33001357)
chr6 (217-287)||(7996378-7996448)
chr6 (217-287)||(8022353-8022423)
chr6 (217-275)||(9025494-9025552)
chr6 (217-319)||(10770674-10770775)
chr6 (217-275)||(10888974-10889032)
chr6 (213-275)||(21924931-21924993)
chr6 (216-285)||(9629374-9629443)
chr6 (225-278)||(30866152-30866205)
chr6 (213-290)||(34172179-34172256)
chr6 (217-269)||(9195754-9195806)
chr6 (213-296)||(7938096-7938179)
chr6 (225-284)||(10842524-10842583)
chr6 (180-255)||(12690437-12690512)
chr6 (217-284)||(21395308-21395374)
chr6 (187-285)||(13364675-13364773)
chr6 (218-296)||(19044444-19044522)
chr6 (217-273)||(9617437-9617493)
chr6 (225-296)||(10339133-10339205)
chr6 (217-285)||(20371110-20371178)
chr6 (215-287)||(21424800-21424872)
chr6 (213-273)||(24614413-24614473)
chr6 (208-287)||(8776964-8777043)
chr6 (231-270)||(8805586-8805625)
chr6 (217-296)||(16766677-16766756)
chr6 (225-284)||(26562681-26562740)
chr6 (181-319)||(28152062-28152193)
chr6 (180-275)||(28715296-28715391)
chr6 (217-287)||(677826-677896)
chr6 (213-275)||(13360368-13360430)
chr6 (219-277)||(13689494-13689552)
chr6 (225-275)||(13851737-13851787)
chr6 (225-287)||(17341672-17341734)
chr6 (225-271)||(24832593-24832639)
chr6 (219-269)||(26178683-26178733)
chr6 (181-251)||(32978863-32978933)
chr6 (226-275)||(1532241-1532290)
chr6 (213-250)||(4864089-4864126)
chr6 (218-275)||(5462687-5462744)
chr6 (221-278)||(7569172-7569229)
chr6 (208-269)||(34595141-34595202)
chr6 (217-253)||(7027265-7027301)
chr6 (225-269)||(17302354-17302398)
chr6 (216-276)||(20518345-20518405)
chr6 (231-287)||(34290091-34290147)
chr6 (233-285)||(34447374-34447426)
[»] chr1 (69 HSPs)
chr1 (196-319)||(36878418-36878541)
chr1 (217-287)||(6427339-6427409)
chr1 (213-284)||(14332638-14332709)
chr1 (213-287)||(9709809-9709883)
chr1 (181-296)||(38078625-38078740)
chr1 (169-287)||(8842666-8842784)
chr1 (213-275)||(39953142-39953204)
chr1 (181-275)||(40181872-40181966)
chr1 (201-287)||(2896105-2896191)
chr1 (181-275)||(5898230-5898324)
chr1 (213-275)||(13436459-13436521)
chr1 (181-275)||(22515851-22515945)
chr1 (213-275)||(41877466-41877528)
chr1 (219-296)||(10572591-10572668)
chr1 (187-284)||(21530681-21530778)
chr1 (222-287)||(36905986-36906051)
chr1 (196-276)||(28674800-28674880)
chr1 (195-287)||(46348361-46348453)
chr1 (213-268)||(1864876-1864931)
chr1 (208-287)||(22881607-22881686)
chr1 (225-284)||(25098563-25098622)
chr1 (218-273)||(27471567-27471622)
chr1 (181-268)||(40258897-40258984)
chr1 (217-272)||(44482234-44482289)
chr1 (225-287)||(398773-398835)
chr1 (201-287)||(5927324-5927410)
chr1 (219-269)||(12713329-12713379)
chr1 (219-269)||(12717420-12717470)
chr1 (181-287)||(13997872-13997978)
chr1 (225-287)||(17831539-17831601)
chr1 (217-275)||(20157350-20157408)
chr1 (217-275)||(34371715-34371772)
chr1 (225-278)||(10233251-10233304)
chr1 (218-287)||(19562622-19562691)
chr1 (231-284)||(25452162-25452215)
chr1 (211-275)||(29229462-29229527)
chr1 (225-270)||(34712391-34712436)
chr1 (160-275)||(38075911-38076028)
chr1 (218-275)||(38503321-38503378)
chr1 (217-289)||(1486709-1486781)
chr1 (181-253)||(1815280-1815352)
chr1 (225-269)||(7918219-7918263)
chr1 (213-253)||(30749863-30749903)
chr1 (213-253)||(30771314-30771354)
chr1 (181-269)||(42359413-42359501)
chr1 (217-284)||(9828036-9828103)
chr1 (226-289)||(12443469-12443532)
chr1 (217-264)||(25272494-25272541)
chr1 (213-248)||(39130763-39130798)
chr1 (181-284)||(43492458-43492561)
chr1 (232-287)||(48450602-48450657)
chr1 (208-250)||(7353484-7353526)
chr1 (217-287)||(18556456-18556526)
chr1 (225-275)||(25361887-25361937)
chr1 (214-292)||(31667409-31667487)
chr1 (213-287)||(35702584-35702658)
chr1 (215-269)||(35999320-35999374)
chr1 (225-287)||(40285662-40285724)
chr1 (218-268)||(41017405-41017455)
chr1 (220-278)||(42325558-42325616)
chr1 (217-286)||(113289-113358)
chr1 (226-275)||(19324563-19324612)
chr1 (230-275)||(34298437-34298482)
chr1 (221-296)||(13011219-13011295)
chr1 (218-270)||(16927186-16927238)
chr1 (219-275)||(23738679-23738735)
chr1 (208-284)||(29163372-29163448)
chr1 (208-319)||(51409982-51410093)
chr1 (213-253)||(52903272-52903312)
[»] chr4 (42 HSPs)
chr4 (181-287)||(21945492-21945598)
chr4 (181-275)||(8423682-8423776)
chr4 (181-269)||(35157949-35158037)
chr4 (219-287)||(36635313-36635381)
chr4 (216-275)||(15029766-15029825)
chr4 (213-279)||(16189706-16189772)
chr4 (194-268)||(48139272-48139346)
chr4 (217-278)||(15659760-15659821)
chr4 (181-285)||(23292950-23293054)
chr4 (213-277)||(33950135-33950199)
chr4 (181-253)||(40179600-40179672)
chr4 (225-285)||(40613441-40613501)
chr4 (211-262)||(42014972-42015024)
chr4 (218-277)||(7214523-7214582)
chr4 (181-268)||(12895238-12895325)
chr4 (195-278)||(29205442-29205525)
chr4 (218-268)||(5775359-5775409)
chr4 (184-285)||(49431016-49431118)
chr4 (226-275)||(22440609-22440658)
chr4 (208-269)||(54580014-54580075)
chr4 (218-266)||(18576038-18576086)
chr4 (227-274)||(903924-903971)
chr4 (160-253)||(4157459-4157553)
chr4 (214-253)||(10499267-10499306)
chr4 (225-287)||(35723392-35723455)
chr4 (217-268)||(40783965-40784016)
chr4 (225-271)||(999356-999402)
chr4 (213-275)||(2361971-2362033)
chr4 (195-253)||(4157172-4157230)
chr4 (181-267)||(9996849-9996935)
chr4 (225-275)||(13134451-13134501)
chr4 (217-275)||(13783282-13783340)
chr4 (229-287)||(21539879-21539937)
chr4 (225-282)||(11931274-11931331)
chr4 (181-270)||(28964212-28964301)
chr4 (202-267)||(30103342-30103406)
chr4 (222-275)||(30522920-30522973)
chr4 (217-274)||(30982878-30982935)
chr4 (211-268)||(36386205-36386262)
chr4 (229-289)||(3731190-3731250)
chr4 (229-289)||(5527174-5527234)
chr4 (217-253)||(46083991-46084027)
[»] chr5 (38 HSPs)
chr5 (217-318)||(11685898-11685998)
chr5 (196-276)||(30502367-30502447)
chr5 (196-276)||(30542710-30542790)
chr5 (208-283)||(16203786-16203861)
chr5 (217-287)||(3966492-3966562)
chr5 (160-285)||(28588616-28588742)
chr5 (225-287)||(27144452-27144514)
chr5 (217-275)||(36838544-36838602)
chr5 (181-253)||(43564904-43564976)
chr5 (180-275)||(27932236-27932331)
chr5 (217-275)||(6471889-6471947)
chr5 (225-287)||(12264837-12264899)
chr5 (181-287)||(21191020-21191126)
chr5 (212-286)||(23220973-23221047)
chr5 (202-270)||(23012393-23012461)
chr5 (208-271)||(12927659-12927722)
chr5 (196-287)||(17123037-17123128)
chr5 (201-275)||(18421825-18421899)
chr5 (217-275)||(39205881-39205939)
chr5 (220-273)||(17593725-17593778)
chr5 (228-269)||(35017044-35017085)
chr5 (218-266)||(14873527-14873575)
chr5 (208-296)||(21576736-21576824)
chr5 (208-296)||(24906292-24906380)
chr5 (160-275)||(42893361-42893477)
chr5 (232-287)||(14674258-14674313)
chr5 (213-296)||(26312749-26312832)
chr5 (217-287)||(6035472-6035541)
chr5 (213-287)||(6247611-6247685)
chr5 (217-275)||(19579702-19579760)
chr5 (217-275)||(32766943-32767001)
chr5 (213-287)||(33178014-33178088)
chr5 (225-275)||(41091265-41091315)
chr5 (181-270)||(21194087-21194176)
chr5 (219-284)||(38749565-38749630)
chr5 (227-275)||(2577190-2577238)
chr5 (219-287)||(15410450-15410518)
chr5 (229-289)||(28262408-28262468)
[»] chr2 (37 HSPs)
chr2 (213-296)||(31018570-31018653)
chr2 (225-286)||(37411252-37411313)
chr2 (181-269)||(5367199-5367287)
chr2 (225-284)||(21616754-21616813)
chr2 (181-275)||(2438683-2438777)
chr2 (181-287)||(30404814-30404920)
chr2 (217-275)||(44860321-44860379)
chr2 (218-287)||(18276510-18276579)
chr2 (215-275)||(23718027-23718087)
chr2 (215-275)||(24105699-24105759)
chr2 (213-273)||(34691801-34691861)
chr2 (213-273)||(34714213-34714273)
chr2 (227-283)||(36281678-36281734)
chr2 (231-319)||(36409641-36409728)
chr2 (219-286)||(39279665-39279732)
chr2 (226-276)||(2665897-2665947)
chr2 (219-289)||(18420436-18420506)
chr2 (225-287)||(35449502-35449564)
chr2 (181-287)||(38117123-38117229)
chr2 (172-277)||(18570971-18571076)
chr2 (213-253)||(20242723-20242763)
chr2 (213-253)||(20922924-20922964)
chr2 (229-289)||(21148439-21148499)
chr2 (231-287)||(21782832-21782888)
chr2 (227-275)||(28677910-28677958)
chr2 (217-253)||(34784982-34785018)
chr2 (208-268)||(40361745-40361805)
chr2 (225-268)||(30527603-30527646)
chr2 (181-319)||(18840977-18841114)
chr2 (218-272)||(18889592-18889646)
chr2 (225-275)||(31808078-31808128)
chr2 (170-279)||(34993935-34994038)
chr2 (181-287)||(37558966-37559072)
chr2 (218-275)||(42832277-42832334)
chr2 (217-253)||(18622629-18622665)
chr2 (213-273)||(23921256-23921316)
chr2 (196-268)||(29176472-29176544)
[»] chr7 (49 HSPs)
chr7 (181-271)||(21880157-21880247)
chr7 (213-275)||(20549792-20549854)
chr7 (181-275)||(27093377-27093471)
chr7 (181-275)||(27184830-27184924)
chr7 (181-275)||(32287427-32287521)
chr7 (213-270)||(3721099-3721156)
chr7 (219-287)||(15902811-15902879)
chr7 (180-275)||(42720853-42720948)
chr7 (221-275)||(8160417-8160471)
chr7 (201-287)||(22484014-22484100)
chr7 (181-275)||(26733305-26733399)
chr7 (225-287)||(32308109-32308171)
chr7 (181-285)||(1433445-1433554)
chr7 (220-289)||(2948670-2948739)
chr7 (219-268)||(5233637-5233686)
chr7 (202-275)||(5835248-5835321)
chr7 (217-270)||(7328691-7328744)
chr7 (172-285)||(25481893-25482006)
chr7 (213-253)||(18213029-18213069)
chr7 (213-268)||(38143231-38143286)
chr7 (195-253)||(15680832-15680890)
chr7 (217-287)||(22602710-22602780)
chr7 (225-287)||(22868031-22868093)
chr7 (214-271)||(9482939-9482996)
chr7 (218-275)||(19206051-19206108)
chr7 (219-275)||(29787373-29787427)
chr7 (225-281)||(5548671-5548727)
chr7 (217-265)||(17307904-17307952)
chr7 (225-273)||(17851434-17851482)
chr7 (219-275)||(33384584-33384640)
chr7 (217-268)||(16341504-16341555)
chr7 (217-268)||(35297672-35297723)
chr7 (181-275)||(598209-598303)
chr7 (225-287)||(6630920-6630982)
chr7 (213-275)||(8090021-8090083)
chr7 (217-275)||(19992002-19992060)
chr7 (217-287)||(27945030-27945100)
chr7 (213-275)||(28155571-28155633)
chr7 (217-275)||(49107822-49107879)
chr7 (220-289)||(2425736-2425805)
chr7 (213-278)||(37870891-37870956)
chr7 (196-253)||(39138467-39138524)
chr7 (207-271)||(1401030-1401094)
chr7 (231-271)||(2424619-2424659)
chr7 (216-289)||(8046030-8046099)
chr7 (227-275)||(23191897-23191945)
chr7 (217-285)||(24339633-24339701)
chr7 (180-268)||(27732207-27732290)
chr7 (181-253)||(41020519-41020591)
[»] chr3 (40 HSPs)
chr3 (225-285)||(32804548-32804608)
chr3 (181-253)||(40993299-40993371)
chr3 (213-273)||(49505150-49505210)
chr3 (213-275)||(7928451-7928513)
chr3 (217-275)||(11313800-11313858)
chr3 (217-285)||(8039835-8039903)
chr3 (213-285)||(8383248-8383320)
chr3 (217-287)||(25948887-25948957)
chr3 (183-252)||(3631708-3631777)
chr3 (213-278)||(4201394-4201459)
chr3 (195-276)||(45451553-45451634)
chr3 (220-319)||(4987294-4987394)
chr3 (217-285)||(10455781-10455849)
chr3 (217-253)||(15314876-15314912)
chr3 (181-269)||(55401082-55401170)
chr3 (208-275)||(8789541-8789608)
chr3 (203-285)||(8842321-8842402)
chr3 (217-271)||(11665949-11666003)
chr3 (217-275)||(16192750-16192808)
chr3 (208-253)||(35222961-35223006)
chr3 (181-316)||(10954911-10955047)
chr3 (196-268)||(25093510-25093582)
chr3 (231-275)||(27277852-27277896)
chr3 (213-264)||(6780415-6780466)
chr3 (217-275)||(1509540-1509598)
chr3 (229-275)||(10690274-10690320)
chr3 (231-285)||(25064900-25064954)
chr3 (217-287)||(28678292-28678362)
chr3 (225-275)||(34307788-34307838)
chr3 (236-289)||(11610508-11610561)
chr3 (227-284)||(12703999-12704056)
chr3 (219-287)||(21720753-21720822)
chr3 (180-253)||(24633364-24633437)
chr3 (216-273)||(38731221-38731278)
chr3 (181-289)||(7171489-7171596)
chr3 (211-287)||(8587015-8587091)
chr3 (232-296)||(10268501-10268565)
chr3 (225-289)||(13620772-13620836)
chr3 (180-287)||(24205004-24205111)
chr3 (181-287)||(25775497-25775602)
[»] chr8 (44 HSPs)
chr8 (213-284)||(13844592-13844663)
chr8 (181-268)||(33405348-33405435)
chr8 (213-275)||(34897086-34897148)
chr8 (226-284)||(39954288-39954346)
chr8 (225-281)||(20785473-20785529)
chr8 (201-285)||(27101506-27101589)
chr8 (225-284)||(24362210-24362269)
chr8 (225-275)||(14731713-14731763)
chr8 (180-269)||(14134706-14134795)
chr8 (215-287)||(4786336-4786408)
chr8 (213-289)||(31236573-31236649)
chr8 (208-270)||(3025557-3025619)
chr8 (217-287)||(15816129-15816199)
chr8 (181-287)||(31556986-31557091)
chr8 (181-287)||(36450718-36450824)
chr8 (219-268)||(11803267-11803316)
chr8 (218-287)||(20679396-20679465)
chr8 (227-275)||(4611535-4611583)
chr8 (180-284)||(5813584-5813688)
chr8 (219-283)||(7442838-7442902)
chr8 (180-284)||(18407711-18407815)
chr8 (217-253)||(29447467-29447503)
chr8 (211-270)||(8342978-8343037)
chr8 (217-268)||(11927086-11927137)
chr8 (213-268)||(20873077-20873132)
chr8 (213-275)||(12606825-12606887)
chr8 (225-279)||(34222944-34222998)
chr8 (217-275)||(36934671-36934729)
chr8 (181-267)||(40332200-40332286)
chr8 (214-287)||(926785-926858)
chr8 (213-250)||(11833888-11833925)
chr8 (214-287)||(22595983-22596056)
chr8 (215-284)||(30077385-30077454)
chr8 (217-269)||(2572056-2572108)
chr8 (213-269)||(4948659-4948715)
chr8 (219-275)||(7658464-7658520)
chr8 (217-253)||(8847279-8847315)
chr8 (219-275)||(12570736-12570792)
chr8 (229-289)||(24447016-24447076)
chr8 (217-289)||(25172698-25172770)
chr8 (217-253)||(26902175-26902211)
chr8 (225-289)||(27213534-27213598)
chr8 (211-287)||(31109512-31109588)
chr8 (231-287)||(37283824-37283880)
[»] scaffold0697 (1 HSPs)
scaffold0697 (187-284)||(1636-1733)
[»] scaffold0050 (1 HSPs)
scaffold0050 (181-268)||(70286-70373)
[»] scaffold0036 (1 HSPs)
scaffold0036 (217-284)||(9747-9814)
[»] scaffold0123 (1 HSPs)
scaffold0123 (225-275)||(44533-44583)
[»] scaffold0053 (1 HSPs)
scaffold0053 (181-287)||(8787-8893)
[»] scaffold0022 (2 HSPs)
scaffold0022 (181-287)||(90832-90938)
scaffold0022 (217-284)||(99885-99952)
[»] scaffold0020 (1 HSPs)
scaffold0020 (217-275)||(135312-135370)
[»] scaffold0008 (1 HSPs)
scaffold0008 (225-287)||(263380-263442)
[»] scaffold0236 (1 HSPs)
scaffold0236 (217-268)||(25768-25819)
[»] scaffold0103 (1 HSPs)
scaffold0103 (223-318)||(51769-51864)
[»] scaffold0004 (1 HSPs)
scaffold0004 (232-287)||(92796-92851)
[»] scaffold0044 (1 HSPs)
scaffold0044 (220-286)||(53170-53236)
[»] scaffold0003 (1 HSPs)
scaffold0003 (217-287)||(241583-241653)


Alignment Details
Target: chr6 (Bit Score: 330; Significance: 0; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 20 - 421
Target Start/End: Original strand, 32298403 - 32298811
Alignment:
Q  20 aaaaacatatgataaaatgtcacaatattgctttagttagatggccctatcaagtcaaaatatagataatgatattagcaacaaaaagggatagccagat 119  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32298403 aaaaacatatgataaaatgtcacaatattgctttagtttgatggccctatcaagtcaaaatatagataatgatattagcaacaaaaagggatagccagat 32298502  T
Q  120 caaaata------taaatttctaaagcactgcttttagaataggacatgaagcatga-cactctttaaattaggcgtgttctggtgttggacatatgtca 212  Q
    ||| | |      |||||| ||||| || |||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||    
T  32298503 caacaaactgtactaaattactaaaacaatgcttttagaataggacatgaagcatgaacactcatcaaattaggcgtgttctggtgttggacatatgtca 32298602  T
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtctgcgtccatatccgtg 312  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  32298603 tgtctgacaccaacacatataattacactaaattatgtgatgatcttaaattattagcggtgttggcatgtcagtatccatgtctgcgtccgtatccgtg 32298702  T
Q  313 cttcatatgctatgcatattgttacagatttcaggttctatcattcttccctataactacttaccttaatgctttcttatgtaagatagttttatagatg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32298703 cttcatatgctatgcatattgttacagatttcaggttctatcattcttccctataactacttaccttaatgctttcttatgtaagatagttttatagatg 32298802  T
Q  413 tgtgttact 421  Q
    |||||||||    
T  32298803 tgtgttact 32298811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 32299650 - 32299753
Alignment:
Q  20 aaaaacatatgataaaatgtcacaatattgctttagttagatggccctatcaagtcaaaatatagataatgatattagcaac-aaaaagggatagccaga 118  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||  | |||||||||||||||||||||||||||| |||||||||||||||||    
T  32299650 aaaaacatatgataaaatgtcacaatattgctttagtttgatggccctatagattcaaaatatagataatgatattagcaacaaaaaagggatagccaga 32299749  T
Q  119 tcaa 122  Q
    ||||    
T  32299750 tcaa 32299753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 213 - 287
Target Start/End: Original strand, 7265589 - 7265663
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||| ||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||    
T  7265589 tgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagt 7265663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 198 - 291
Target Start/End: Complemental strand, 19040430 - 19040337
Alignment:
Q  198 gttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattc 291  Q
    |||| |||| |||| ||||||||||  ||||||||||||||||| |||||||||||  |||||||||||||||||||| ||| |||||||||||    
T  19040430 gttgaacatgtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtattc 19040337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 213 - 296
Target Start/End: Original strand, 5732506 - 5732589
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtc 296  Q
    ||||||||||| |||||||||||||||||||| ||||||||  ||||||||||||| |||||| ||| ||||||| | ||||||    
T  5732506 tgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtc 5732589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 7977783 - 7977909
Alignment:
Q  170 acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    |||||| ||| ||||||||||||  | ||| ||||||||||  ||||||||||| |||| | |||||||||| |||||||| ||  | ||||||||||||    
T  7977783 acactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattag 7977882  T
Q  270 cggtgttggcatgtcagtattcatgtc 296  Q
    | |||| ||| ||||||||| ||||||    
T  7977883 ctgtgtcggcgtgtcagtatccatgtc 7977909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 9027237 - 9027167
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||| ||| |||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagt 9027167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 32511630 - 32511724
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||| || | |||  |||||||||| | |||||||||||||| |||||||||||| |||||||||||  ||| ||||||||||||||||    
T  32511630 attaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgt 32511724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 287
Target Start/End: Complemental strand, 9658975 - 9658868
Alignment:
Q  180 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 279  Q
    |||||||||||||| |||||  ||||  |||| ||||  ||||| ||| ||||||||||||| |||||||||||  ||| |||||||||||||||| |||    
T  9658975 aattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggc 9658876  T
Q  280 atgtcagt 287  Q
     |||||||    
T  9658875 gtgtcagt 9658868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 7151471 - 7151409
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 279  Q
    ||||||||||||||||||||||||| |||||||||||  | |||||||||||| |||||||||    
T  7151471 cgacaccaacacatataattacacttaattatgtgattttttcaaattattagaggtgttggc 7151409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 34073347 - 34073417
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||| || |||||||||||||| ||||||| |||  |||||||||||||||| |||||||||||||||    
T  34073347 cgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagt 34073417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 31579208 - 31579286
Alignment:
Q  198 gttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 278  Q
    ||||||||| |||| ||||||||||| |||||||  |||||||| |||||||||||  ||||||||||||| |||||||||    
T  31579208 gttggacatgtgtcgtgtccgacaccgacacata--attacactgaattatgtgattttctcaaattattaacggtgttgg 31579286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 275
Target Start/End: Complemental strand, 7378048 - 7377980
Alignment:
Q  207 atgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||| ||||||||||| ||||||||||||||| | |||||||||||  ||||||||| ||||||||||    
T  7378048 atgtcgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgt 7377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 10294166 - 10294094
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    ||||||| ||||||||||||||| | || |||| ||| ||||||||||||||||||| | |||||||||||||    
T  10294166 cgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtat 10294094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 7086852 - 7086801
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagc 270  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 287
Target Start/End: Original strand, 17841568 - 17841659
Alignment:
Q  196 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||| ||||| ||||| |||||||||||  ||| | ||||||||||||||||||||||  | ||||||||||||| |||| ||| |||||||    
T  17841568 gtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 17841659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 285
Target Start/End: Original strand, 33001242 - 33001357
Alignment:
Q  170 acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    |||||||||  ||||||||| ||  |||||  ||||  |||| ||||||||||| ||||||||||||||| | |||||||||||  | ||||||||||||    
T  33001242 acactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattag 33001341  T
Q  270 cggtgttggcatgtca 285  Q
    | |||| ||| |||||    
T  33001342 cagtgtcggcgtgtca 33001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 7996378 - 7996448
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||| || |||||||||||||| |||||| ||||  ||||||||||||||| |||| |||||||||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagt 7996448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 8022423 - 8022353
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||| || |||||||||||||| |||||| ||||  ||||||||||||||| |||| |||||||||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagt 8022353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 9025494 - 9025552
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| ||||    
T  9025494 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgt 9025552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 319
Target Start/End: Original strand, 10770674 - 10770775
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtctgcgtccatatccgtgcttc 316  Q
    ||||||| |||| | |||||||||| |||||||||||  | ||||||||||||  |||||||| ||||||| | |||||| | |||| ||||||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtc-gtgtccgtatccgtgcttc 10770772  T
Q  317 ata 319  Q
    |||    
T  10770773 ata 10770775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 10888974 - 10889032
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||| |||||||||||| |||||||||||||||||  | ||||||||||||||||||    
T  10888974 cgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgt 10889032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 21924931 - 21924993
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||| ||||||||||||||||| |||||| ||||  ||||||||||||||| ||||    
T  21924931 tgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgt 21924993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 9629443 - 9629374
Alignment:
Q  216 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 285  Q
    |||||||| ||||||||||||||| | |||||||||||  |||||||||||| ||||||| ||| |||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtca 9629374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 30866152 - 30866205
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 278  Q
    ||||||||||||||| | |||||||||||  |||||||||||||||||||||||    
T  30866152 acacatataattacattgaattatgtgattttctcaaattattagcggtgttgg 30866205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 34172256 - 34172179
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtatt 290  Q
    ||||||||||| ||||||||||||  | | |||||||||||  ||||||||| |||| ||||| ||||||||||||||    
T  34172256 tgtccgacaccgacacatataattttaattaattatgtgattttctcaaattgttagaggtgtcggcatgtcagtatt 34172179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 9195754 - 9195806
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    ||||||| |||||||||||||||||||||||||| ||  ||||||||||||||    
T  9195754 cgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 296
Target Start/End: Complemental strand, 7938179 - 7938096
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtc 296  Q
    |||| |||||| |||| ||||||||||||||||||| ||||  | ||||||||||||| |||| ||| ||||||| | ||||||    
T  7938179 tgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtc 7938096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 10842583 - 10842524
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    |||||||| ||||||||||||||||||||  | |||||||||||||||||| ||| ||||    
T  10842583 acacatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtc 10842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 12690512 - 12690437
Alignment:
Q  180 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatga 255  Q
    |||||||||||||||| |||| |||| ||||  ||||||||| | ||||||||||||||| | |||||||| ||||    
T  12690512 aattaggcgtgttctgatgttagacacatgtagtgtccgacatcgacacatataattacattgaattatgttatga 12690437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 21395308 - 21395374
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||| |||| | ||||||||||||||||||| ||  |||||||||||||||||||||||| ||||    
T  21395308 cgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtc 21395374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 13364675 - 13364773
Alignment:
Q  187 cgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 285  Q
    ||||| |||||||  ||||| | || ||||| ||||| |||||||| |||||||| |||||| ||||  ||||||||||| ||| |||| |||||||||    
T  13364675 cgtgtcctggtgtcagacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgattttctcaaattataagcagtgtcggcatgtca 13364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 296
Target Start/End: Complemental strand, 19044522 - 19044444
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtc 296  Q
    |||||| ||||||||||| ||||| |||||||||||  ||||||||||||||  |||| ||| ||||||| | ||||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtccatgtc 19044444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 9617493 - 9617437
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 273  Q
    ||||||| ||||||||||||||| | |||||||||||  ||||||||||||| ||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 10339133 - 10339205
Alignment:
Q  225 acacatataatta-cactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtc 296  Q
    ||||||||||||| |||| |||||||||||  |||||||||| | ||||||| ||| ||||||| ||||||||    
T  10339133 acacatataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtc 10339205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 20371110 - 20371178
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 285  Q
    ||||||| ||||||||||| ||| | | |||||||||  |||||||||||||||||||| ||| |||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtca 20371178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 21424800 - 21424872
Alignment:
Q  215 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||||||| ||||||||| || | | | |||||||||  | |||||||||||||||||||||| |||||||    
T  21424800 tccgacaccagcacatataaatatattgacttatgtgattttttcaaattattagcggtgttggcgtgtcagt 21424872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 24614473 - 24614413
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 273  Q
    ||||||||||||||||||| |||||||||||||||| | ||  | | ||||||||||||||    
T  24614473 tgtccgacaccaacacatacaattacactaaattatataatttttttaaattattagcggt 24614413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 8776964 - 8777043
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||| |||||||||||||||| | |||||||||| |||| ||||||  | ||||||||||||  |||| ||| |||||||    
T  8776964 tgtcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagt 8777043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 270
Target Start/End: Original strand, 8805586 - 8805625
Alignment:
Q  231 ataattacactaaattatgtgatgatctcaaattattagc 270  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  8805586 ataattacactaaattatgtgattttctcaaattattagc 8805625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 16766756 - 16766677
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtc 296  Q
    ||||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| ||||||| | ||||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtc 16766677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 26562740 - 26562681
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||||||||||||| |||||||||||  ||||||||| ||||| |||| ||| ||||    
T  26562740 acacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtc 26562681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 319
Target Start/End: Complemental strand, 28152193 - 28152062
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    ||||||| ||| | ||||| |||||  |||| ||||||||||| |||| | |||||||||| |||||||||||  | |||||||||||||  ||| |||     
T  28152193 attaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgat-ttttcaaattattagctttgtcggcg 28152095  T
Q  281 tgtcagtattcatgtctgcgtccatatccgtgcttcata 319  Q
    ||||||      |||| | ||||||||||||||||||||    
T  28152094 tgtcag------tgtccgtgtccatatccgtgcttcata 28152062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 28715391 - 28715296
Alignment:
Q  180 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||| | ||||| | |||  |||| ||||||||||| |||| | |||||||||| |||||||| ||  | ||||||||||||| ||||    
T  28715391 aattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgt 28715296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 677896 - 677826
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||||||| ||||||| ||||||| ||||| ||||  ||||||||||||| | |||| ||| |||||||    
T  677896 cgacaccaacgcatataaatacactatattatatgattttctcaaattattaacagtgtcggcgtgtcagt 677826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 13360368 - 13360430
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||| |||||| | ||||||||||||||| |||||||||||  |||||||||| ||| |||||    
T  13360368 tgtctgacaccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgt 13360430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 277
Target Start/End: Original strand, 13689494 - 13689552
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttg 277  Q
    |||||||||| ||||||||||| ||||| | ||||  | ||||||||||||||||||||    
T  13689494 acaccaacacgtataattacacgaaattgtatgattttatcaaattattagcggtgttg 13689552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 13851787 - 13851737
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||||||||| ||||| || ||  ||||||||||||||||||||    
T  13851787 acacatataattacactgaattacgttattttctcaaattattagcggtgt 13851737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 17341672 - 17341734
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||| |||||||||||| |||||||||||  | ||||||||||| |||||| ||| |||||||    
T  17341672 acacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagt 17341734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 24832639 - 24832593
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcg 271  Q
    ||||||||||||||||||||||||  |||  ||||||||||||||||    
T  24832639 acacatataattacactaaattataagattttctcaaattattagcg 24832593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 26178683 - 26178733
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    ||||| |||||||| ||||||||||||||||||||  | ||||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattattag 26178733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 32978863 - 32978933
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtg 251  Q
    ||||| ||||| | ||||| |||||| |||| ||||||||||| |||| | |||||||||| |||||||||    
T  32978863 attagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtg 32978933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 1532290 - 1532241
Alignment:
Q  226 cacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||||||| |||||||| ||  | ||||||||||||||||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 4864126 - 4864089
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgt 250  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  4864126 tgtccgacaccaacacatataattaaattaaattatgt 4864089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 275
Target Start/End: Complemental strand, 5462744 - 5462687
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||| ||||| ||||||||||| | |||||||||||  ||||||||||||| ||||||    
T  5462744 gacatcaacatatataattacaatgaattatgtgattttctcaaattattaacggtgt 5462687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 7569172 - 7569229
Alignment:
Q  221 accaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 278  Q
    |||||||| |||||||||||| |||||||| ||  ||||||||||||| | |||||||    
T  7569172 accaacacctataattacactgaattatgtaattttctcaaattattatctgtgttgg 7569229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 34595202 - 34595141
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    |||| ||||||||||| |||| | |||||||||| |||||||||||  | ||||||||||||    
T  34595202 tgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 34595141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 7027301 - 7027265
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgat 7027265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 17302398 - 17302354
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    |||||||||||||||| ||||||||||||  ||| ||||||||||    
T  17302398 acacatataattacacaaaattatgtgattttcttaaattattag 17302354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 276
Target Start/End: Complemental strand, 20518405 - 20518345
Alignment:
Q  216 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 276  Q
    |||||||||||||||||||||| ||| | |||||| ||  ||||||||| |||| ||||||    
T  20518405 ccgacaccaacacatataattatactgatttatgtaattttctcaaattgttagtggtgtt 20518345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 34290091 - 34290147
Alignment:
Q  231 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||| |||||||||||  || |||||||||||  |||| |||||||||||    
T  34290091 ataattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagt 34290147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 34447374 - 34447426
Alignment:
Q  233 aattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 285  Q
    |||||||||||||||| ||||  | ||||||||||| |||||||||| |||||    
T  34447374 aattacactaaattatatgattttatcaaattattaacggtgttggcgtgtca 34447426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 196 - 319
Target Start/End: Complemental strand, 36878541 - 36878418
Alignment:
Q  196 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgt 295  Q
    |||| |||||| | || |||| |||||| |||| |||||||||||| |||||||||||  |||||||||||||||||||| ||| ||||||| |  ||||    
T  36878541 gtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgt 36878442  T
Q  296 ctgcgtccatatccgtgcttcata 319  Q
    | | |||| |||||||||||||||    
T  36878441 ccgtgtccgtatccgtgcttcata 36878418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 6427409 - 6427339
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||||||||||||||| | |||||||||||  |||||||||||||||||||||||| |||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagt 6427339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 14332638 - 14332709
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||||||| | |||||||||||||||||||||||||||  |||||||||||||| ||||| ||||||||    
T  14332638 tgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattagtggtgtgggcatgtc 14332709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 9709883 - 9709809
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||| |||||||||||||||   |||||||||||  |||||||||||||||||||| |||||||||||    
T  9709883 tgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagt 9709809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 181 - 296
Target Start/End: Original strand, 38078625 - 38078740
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    ||||||||||| ||||||||| |||| |||| ||||||||||| |||| | |||||||| | |||||||||||  | ||||||||||||| |||| | |     
T  38078625 attaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacg 38078724  T
Q  281 tgtcagtattcatgtc 296  Q
    ||||||| ||| ||||    
T  38078725 tgtcagtgttcgtgtc 38078740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 287
Target Start/End: Original strand, 8842666 - 8842784
Alignment:
Q  169 gacactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    |||||||||| |||||||||||| ||| ||| ||| |  |||| ||||||||||||| ||||||||||||| |||||||| || |  |||||||||| ||    
T  8842666 gacactctttgaattaggcgtgtcctgatgtcggatacgtgtcgtgtccgacaccaatacatataattacattaaattatatgtttttctcaaattacta 8842765  T
Q  269 gcggtgttggcatgtcagt 287  Q
    | ||||  ||| |||||||    
T  8842766 gtggtgccggcgtgtcagt 8842784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 39953142 - 39953204
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||| ||||||| |||||||||||||||||||||  ||| ||||||||||||||||    
T  39953142 tgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgt 39953204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 40181966 - 40181872
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||| | ||||| |||||  |||  ||||||||||| | ||||||||||||||| |||||||||||  ||||||||||||||| ||||    
T  40181966 attaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgt 40181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 201 - 287
Target Start/End: Original strand, 2896105 - 2896191
Alignment:
Q  201 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||| ||||| |||| |||||| ||| |||||  |||||| |||||||||||  |||||||||||||||||||| ||| |||||||    
T  2896105 ggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 2896191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 5898230 - 5898324
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||| ||||| | |||||||||||  |||| |||| |||||| || |||||||||||||| |||||||||||  | ||| ||||||||||||||    
T  5898230 attagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgt 5898324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 13436521 - 13436459
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||||||||||||||||||||| |||||||||||   || ||||||||||| ||||    
T  13436521 tgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgt 13436459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 22515851 - 22515945
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||   ||||| ||| || |||| ||||||||||| |||| | ||||||||||||||||||||||  | ||||||||||||| ||||    
T  22515851 attaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 22515945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 41877466 - 41877528
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||| |||| | ||||||||||||||||||| ||  ||||||||||||||||||||    
T  41877466 tgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgt 41877528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 10572591 - 10572668
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtc 296  Q
    ||||| |||||| |||||||||  |||||||||||  |||||||||||||| ||||| ||| ||||||| ||||||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtc 10572668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 284
Target Start/End: Complemental strand, 21530778 - 21530681
Alignment:
Q  187 cgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||| || |||| |||||| |||| ||||||||||| |||| |||||||| || ||||||| ||||  ||||||||||||| |||||| ||| ||||    
T  21530778 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtc 21530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 36906051 - 36905986
Alignment:
Q  222 ccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||||||||| || |||||||||||  ||||| |||||||||||||||||  |||||||    
T  36906051 ccaacacatataattactctgaattatgtgattttctcagattattagcggtgttggtgtgtcagt 36905986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 276
Target Start/End: Complemental strand, 28674880 - 28674800
Alignment:
Q  196 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 276  Q
    ||||||||||  |||| |||| |||||||||| ||||||||| ||| |||||||| ||  ||||||||||||| |||||||    
T  28674880 gtgttggacaagtgtcgtgtctgacaccaacatatataattatactgaattatgtaattttctcaaattattaacggtgtt 28674800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 287
Target Start/End: Original strand, 46348361 - 46348453
Alignment:
Q  195 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||| |||||  |||| ||||||||||| |||| | ||||||||||||||||| ||||  | ||||||||||||| |||| ||| |||||||    
T  46348361 ggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagt 46348453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 1864876 - 1864931
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    ||||| ||||| ||||||||||||||||| |||||||||||  |||||||||||||    
T  1864876 tgtccaacaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 22881607 - 22881686
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||| ||||||||||| |||| | ||||||||||||||||||||||  | ||||||||||||  |||| ||| |||||||    
T  22881607 tgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagt 22881686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 25098563 - 25098622
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||||||||||||| |||||||||||  ||||||||||| |||||||| ||| ||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtcggcttgtc 25098622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 273
Target Start/End: Original strand, 27471567 - 27471622
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 273  Q
    ||||||||||||| |||||||||| ||||||||| |  ||||||||||||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggt 27471622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 40258897 - 40258984
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    ||||||||||| ||||||| |||||  |||| |||| |||||| |||| | |||||||||| |||||||||||  | |||||||||||    
T  40258897 attaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 44482289 - 44482234
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcgg 272  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||||||| |||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgattttctcaaattataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 398773 - 398835
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||| |||||||||||| |||||||||||  | |||||||||||||||||| ||| |||||||    
T  398773 acacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagt 398835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 287
Target Start/End: Original strand, 5927324 - 5927410
Alignment:
Q  201 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||| |||||||||||||||  |||| | |||||||| |||||||| ||||  | ||||||||||||| ||||| || |||||||    
T  5927324 ggacatttgtcatgtccgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagt 5927410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 12713329 - 12713379
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    ||||||| |||||||||||||||||||||||||||  ||| ||||||||||    
T  12713329 acaccaatacatataattacactaaattatgtgattttcttaaattattag 12713379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 12717420 - 12717470
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    ||||||| |||||||||||||||||||||||||||  ||| ||||||||||    
T  12717420 acaccaatacatataattacactaaattatgtgattttcttaaattattag 12717470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 13997978 - 13997872
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    ||||| |||||  ||||||| ||||| |||| | ||| ||||| ||||||||||||||||| |||||||||||  | | |||| |||| |||||| |||     
T  13997978 attagacgtgtcatggtgtttgacatgtgtcgtctccaacaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcg 13997879  T
Q  281 tgtcagt 287  Q
    |||||||    
T  13997878 tgtcagt 13997872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 17831539 - 17831601
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||||| |||||||| ||| |||||||  |||||||||||||||||||| ||| |||||||    
T  17831539 acacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 20157350 - 20157408
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||| |||||||| |||||||| |||||||||||  ||||| ||||||||||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgt 20157408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 34371772 - 34371715
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||| ||||||||||||||||| |||||||||||  |||| |||||||||||||||    
T  34371772 cgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgt 34371715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 10233304 - 10233251
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 278  Q
    ||||||||||||||||| |||||||||||  |||||| ||||||| ||||||||    
T  10233304 acacatataattacactgaattatgtgattttctcaatttattagtggtgttgg 10233251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 19562622 - 19562691
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||| ||||||||||||||||| || |||| |||  ||||||||||||||| |||| ||| |||||||    
T  19562622 gacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagt 19562691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 25452162 - 25452215
Alignment:
Q  231 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||||||| ||||||| |||  ||||||||||||||| |||||||||||||    
T  25452162 ataattacactgaattatgagattttctcaaattattagcagtgttggcatgtc 25452215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 29229527 - 29229462
Alignment:
Q  211 catgtccgacaccaacacatataattac-actaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||| |||||||| |||||||||||||| ||||||| |||||||  ||||||||||||||| ||||    
T  29229527 catgcccgacaccgacacatataattaccactaaatcatgtgattttctcaaattattagcagtgt 29229462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 34712391 - 34712436
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagc 270  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||    
T  34712391 acacatataattacactaaattatgttattttctcaaattattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 275
Target Start/End: Original strand, 38075911 - 38076028
Alignment:
Q  160 atgaagcatg-acactctttaaattaggcgtgttctggtgttggacatatgtc-atgtccgacaccaacacatataattacactaaattatgtgatgatc 257  Q
    |||||||||| |||||| | ||||||||||||| | ||||| || || |  || |||||||||||| |||||||| |||||||| | |||||||||   |    
T  38075911 atgaagcatgtacactcctcaaattaggcgtgtcccggtgtcggtcacacatcgatgtccgacaccgacacatatgattacactgacttatgtgatttac 38076010  T
Q  258 tcaaattattagcggtgt 275  Q
    ||||||||||||| ||||    
T  38076011 tcaaattattagcagtgt 38076028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 275
Target Start/End: Complemental strand, 38503378 - 38503321
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||| ||||||||||||||||| || ||| ||||  ||||||||||||||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgt 38503321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 1486709 - 1486781
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    ||||||| |||| |||||||||||| |||||||||||  | ||||||||||||| ||||  || |||||||||    
T  1486709 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtat 1486781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 1815352 - 1815280
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||||||| | ||||| |||||| |||| |||| |||||| |||| | |||||||||| |||||||||||    
T  1815352 attaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgat 1815280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 7918219 - 7918263
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||    
T  7918219 acacatataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 30749903 - 30749863
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  30749903 tgtccgacaccgacacatataattacactgaattatgtgat 30749863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 30771354 - 30771314
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  30771354 tgtccgacaccgacacatataattacactgaattatgtgat 30771314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 42359413 - 42359501
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    ||||||||||| | ||||| ||||| | ||| ||||||||||| |||| | |||||||||| |||| ||||||  | ||||||||||||    
T  42359413 attaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattag 42359501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 284
Target Start/End: Complemental strand, 9828103 - 9828036
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||| ||||||| ||||||||| |||||||||||  | |||||||||||| ||||| ||| ||||    
T  9828103 cgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 12443469 - 12443532
Alignment:
Q  226 cacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    |||||| ||||||||| |||||||||||  ||||||||||||||| |||| ||| |||| ||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtat 12443532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 25272541 - 25272494
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaatt 264  Q
    ||||||| |||| ||||||||||||||||||||||||  |||||||||    
T  25272541 cgacaccgacacttataattacactaaattatgtgattttctcaaatt 25272494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 248
Target Start/End: Original strand, 39130763 - 39130798
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattat 248  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39130763 tgtccgacaccgacacatataattacactaaattat 39130798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 284
Target Start/End: Original strand, 43492458 - 43492561
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    ||||||||||| | ||||| |||||| |||  |||| |||||| ||||| ||||||||||  ||||| |||||  |||||||||| ||| ||||| |||     
T  43492458 attaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttctcaaattactagtggtgtcggcg 43492557  T
Q  281 tgtc 284  Q
    ||||    
T  43492558 tgtc 43492561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 48450602 - 48450657
Alignment:
Q  232 taattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||||||||||| ||  | ||||||||||||| |||||||| |||||||    
T  48450602 taattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagt 48450657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 7353484 - 7353526
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgt 250  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||    
T  7353484 tgtcatgttcgacaccgacatatataattacactaaattatgt 7353526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 18556456 - 18556526
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||| || | |||||||| |||||||||||||  | ||||||||||||| |||| ||| |||||||    
T  18556456 cgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagt 18556526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 25361937 - 25361887
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||||||||| |||||||||||  ||||||||||| || |||||    
T  25361937 acacatataattacactgaattatgtgattttctcaaattatcagtggtgt 25361887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 292
Target Start/End: Complemental strand, 31667487 - 31667409
Alignment:
Q  214 gtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattca 292  Q
    |||||||||| |||||| | |||||| | |||||||| ||  ||| ||||||||| | |||||| ||||||||||||||    
T  31667487 gtccgacaccgacacatgtgattacatttaattatgtcattttctaaaattattaccagtgttgacatgtcagtattca 31667409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 287
Target Start/End: Original strand, 35702584 - 35702658
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||  |||| | |||||||||| |||||| ||| | | ||||||||||||| |||| |||||||||||    
T  35702584 tgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtcggcatgtcagt 35702658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 35999320 - 35999374
Alignment:
Q  215 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    ||||||| ||||||||||||||| |||||||||| ||||  ||| ||||||||||    
T  35999320 tccgacatcaacacatataattatactaaattatatgattttcttaaattattag 35999374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 40285662 - 40285724
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||||| | |||||| ||||||| |||  |||||||||||||||||||||||  |||||||    
T  40285662 acacatatgactacactgaattatgcgattttctcaaattattagcggtgttggtgtgtcagt 40285724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 41017405 - 41017455
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    |||||||||| ||||||||||| |||||||||| ||  |||||||||||||    
T  41017405 gacaccaacatatataattacattaaattatgtcattttctcaaattatta 41017455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 42325616 - 42325558
Alignment:
Q  220 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 278  Q
    |||||||||||||  ||||||| |||||||| ||  ||||||||||||| |||||||||    
T  42325616 caccaacacatattgttacactgaattatgtcattttctcaaattattatcggtgttgg 42325558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 286
Target Start/End: Complemental strand, 113358 - 113289
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 286  Q
    ||||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| ||||||    
T  113358 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 19324612 - 19324563
Alignment:
Q  226 cacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||||||| |||||||||||  ||||||||||| ||| ||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattatcagcagtgt 19324563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 34298482 - 34298437
Alignment:
Q  230 tataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||| |||||||||||  |||||||||||||| |||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgt 34298437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 296
Target Start/End: Original strand, 13011219 - 13011295
Alignment:
Q  221 accaacacatataattacactaaattatgtgatgatct-caaattattagcggtgttggcatgtcagtattcatgtc 296  Q
    |||||||| | |||||||||| |||||||||||  | | |||||||||||| |||| ||||||||||| ||| ||||    
T  13011219 accaacacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtgtc 13011295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 16927186 - 16927238
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 270  Q
    |||||||||| ||||||||||||| |||||| ||||  | |||||||||||||    
T  16927186 gacaccaacatatataattacactgaattatatgattttttcaaattattagc 16927238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 23738735 - 23738679
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||| ||||| |||| |||||||||||  | ||||||||||||| ||||    
T  23738735 acaccaacacatttaattgcactgaattatgtgattttttcaaattattagctgtgt 23738679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 284
Target Start/End: Original strand, 29163372 - 29163448
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    |||| ||||||||||| ||||||||||||| | | |||||||||||  ||  ||||| |||||||||| ||| ||||    
T  29163372 tgtcgtgtccgacaccgacacatataattaaattgaattatgtgattttcctaaatttttagcggtgtcggcgtgtc 29163448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 319
Target Start/End: Complemental strand, 51410093 - 51409982
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgtga-tgatctcaaattattagcggtgttggcatgtcagtattcatgtctgcgtccata 306  Q
    |||| ||||||||||| |||| | |||||||||| |||||||||| |  | ||||||||||||  |||| |||||||| || ||  |||| | |||| ||    
T  51410093 tgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcggcatgtccgt-tttgtgtccgtgtccgta 51409995  T
Q  307 tccgtgcttcata 319  Q
    |||||||||||||    
T  51409994 tccgtgcttcata 51409982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 52903312 - 52903272
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||||||| ||||||||||||||||| |||||| ||||    
T  52903312 tgtccgacaccgacacatataattacactgaattatatgat 52903272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 21945598 - 21945492
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    ||||||||||||  ||||| |||||| |||||||||||||||| |||| | |||||||||| |||||||| ||  | ||||||||||||| |||| ||||    
T  21945598 attaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggca 21945499  T
Q  281 tgtcagt 287  Q
    |||||||    
T  21945498 tgtcagt 21945492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 8423682 - 8423776
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||| | ||||| |||||  |||| ||||||||||| |||  |||||||||||| |||||||||||  ||||||||||||||||||||    
T  8423682 attaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgt 8423776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 35157949 - 35158037
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    |||| |||||||| |||||||||||| |||| |||| |||||| |||| ||||||||||||||||||||||||  |  |||||||||||    
T  35157949 attaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttttccaaattattag 35158037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 36635381 - 36635313
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||| |||||||||||||||||| |||||||||||  |||||||||||||| ||||||||| |||||||    
T  36635381 acacgaacacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagt 36635313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 15029825 - 15029766
Alignment:
Q  216 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||||||||||||||||| |||||||||||  | ||||||||||||| ||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgt 15029766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 279
Target Start/End: Complemental strand, 16189772 - 16189706
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 279  Q
    |||||| |||| ||||| ||||||||||| |||||||||||  ||||||||| ||||||||||||||    
T  16189772 tgtccgtcaccgacacacataattacactgaattatgtgattttctcaaatttttagcggtgttggc 16189706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 48139346 - 48139272
Alignment:
Q  194 tggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    |||||| | |||| |||| |||| |||| ||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  48139346 tggtgtcgaacatgtgtcgtgtctgacatcaacacatataattacattaaattatgagattatctcaaattatta 48139272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 15659760 - 15659821
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 278  Q
    ||||||||||||||||||||||||  ||||||| |||  ||||||||||||||| |||||||    
T  15659760 cgacaccaacacatataattacaccgaattatgagattttctcaaattattagcagtgttgg 15659821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 285
Target Start/End: Original strand, 23292950 - 23293054
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    ||||||||||| | ||||| |||||  |||| ||||||||||| |||| | |||||| ||| |||||||||||  | ||||||||||||| |||| |||     
T  23292950 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcg 23293049  T
Q  281 tgtca 285  Q
    |||||    
T  23293050 tgtca 23293054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 33950199 - 33950135
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttg 277  Q
    |||| |||||| |||||||| |||||| |||||||||||||  ||||||||||||||||| ||||    
T  33950199 tgtctgacaccgacacatatgattacattaaattatgtgattttctcaaattattagcggcgttg 33950135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 40179600 - 40179672
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    |||||||||||  |||||| | |||| |||| ||||||||||| || |||||||||||||| |||||||||||    
T  40179600 attaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgat 40179672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 40613501 - 40613441
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 285  Q
    ||||||||||||||||| |||||||||||  ||||||| |||||||||||| ||| |||||    
T  40613501 acacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 42015024 - 42014972
Alignment:
Q  211 catgtccgacaccaacacatataattacact-aaattatgtgatgatctcaaa 262  Q
    ||||||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  42015024 catgtccgacaccaacacatataattacactgaatttatgtgattatctcaaa 42014972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 277
Target Start/End: Original strand, 7214523 - 7214582
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttg 277  Q
    |||||| || |||||||||||| |||||||||||||  |||||||||||||| |||||||    
T  7214523 gacaccgacgcatataattacattaaattatgtgattttctcaaattattagtggtgttg 7214582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 12895238 - 12895325
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    ||||||||||| | | ||| ||| | ||||| ||||||||||| |||| ||||||||||| ||||||||||||  | |||||||||||    
T  12895238 attaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattatta 12895325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 278
Target Start/End: Complemental strand, 29205525 - 29205442
Alignment:
Q  195 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 278  Q
    ||||| |||||| |||| ||||| ||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||||||    
T  29205525 ggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgttgg 29205442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 5775359 - 5775409
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    |||||| ||||||||||||||||| |||||||||||  |||||||||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 49431118 - 49431016
Alignment:
Q  184 aggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtga-tgatctcaaattattagcggtgttggcatg 282  Q
    |||||||| | |||||||||||  |||| ||||||||||| |||| | |||||||||| |||||||||| |  | ||||||||||||| |||| ||| ||    
T  49431118 aggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtg 49431019  T
Q  283 tca 285  Q
    |||    
T  49431018 tca 49431016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 22440609 - 22440658
Alignment:
Q  226 cacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||||||| |||||||||||  ||||||||||||| ||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgt 22440658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 269
Target Start/End: Original strand, 54580014 - 54580075
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    |||| ||||||||||| |||| |||||||||||| |||||||||||  | ||||||||||||    
T  54580014 tgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 18576038 - 18576086
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattat 266  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||||    
T  18576038 gacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 903971 - 903924
Alignment:
Q  227 acatataattacactaaattatgtgatgatctcaaattattagcggtg 274  Q
    ||||||||||||||| |||||||||||  ||||||||||||| |||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtg 903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 253
Target Start/End: Complemental strand, 4157553 - 4157459
Alignment:
Q  160 atgaagcat-gacactctttaaattaggcgtgttct-ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||||| ||||||| |  |||||||||| |||| ||||| |||||| |||| ||||||||||| |||| | ||||| ||||||||||||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgt-ttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgat 4157459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 10499267 - 10499306
Alignment:
Q  214 gtccgacaccaacacatataattacactaaattatgtgat 253  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  10499267 gtccgacactgacacatataattacactaaattatgtgat 10499306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 35723392 - 35723455
Alignment:
Q  225 acacatataattacactaaattatgtg-atgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||||||| | ||||||||| ||  |||||||||||||||||||| ||| |||||||    
T  35723392 acacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 40784016 - 40783965
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    |||||||||||||||| ||||| || |||||||| || ||||||||||||||    
T  40784016 cgacaccaacacatatgattacgctgaattatgttattatctcaaattatta 40783965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 271
Target Start/End: Original strand, 999356 - 999402
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcg 271  Q
    |||||||||||||||||||||||| ||||   |||||||||||||||    
T  999356 acacatataattacactaaattatatgatttactcaaattattagcg 999402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 2361971 - 2362033
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||| |||| | ||||||||||||||||||| ||  | ||||||||||||| ||||    
T  2361971 tgtccgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgt 2362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 4157230 - 4157172
Alignment:
Q  195 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||| |||||| |||| ||||||||||| |||| | ||||| ||||||||||||||||    
T  4157230 ggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgat 4157172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 9996935 - 9996849
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatt 267  Q
    |||||| ||||||  |||| |||||  ||| ||||| |||||| | ||||||||||| ||| |||||||||||  ||||||||||||    
T  9996935 attaggtgtgttccagtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 13134501 - 13134451
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||||||||||||||||||||  ||| ||||||| ||| ||||    
T  13134501 acacatataattacactaaattatgtgattttcttaaattataagcagtgt 13134451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 13783340 - 13783282
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||  |||||||||||||||| |||| ||||||  |||||||| |||||||||||    
T  13783340 cgacaccggcacatataattacactgaattttgtgatcttctcaaataattagcggtgt 13783282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 21539879 - 21539937
Alignment:
Q  229 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||||||||||||||||| ||||  ||| |||||||||  ||||| |||||||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtcggcatgtcagt 21539937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 11931331 - 11931274
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatg 282  Q
    ||||||||| |||||||||||||||||||  | ||| ||||||| |||||| ||||||    
T  11931331 acacatatatttacactaaattatgtgattttttcatattattaacggtgtcggcatg 11931274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 28964212 - 28964301
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 270  Q
    ||||||||||| |  |||| ||| || |||| ||||||||||  |||| | |||||||||| |||||||||||  | |||||||||||||    
T  28964212 attaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattattagc 28964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 30103342 - 30103406
Alignment:
Q  202 gacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatt 267  Q
    |||||||||| |||  |||||| |||||||| |||||||||| |||||||||  ||||||||||||    
T  30103342 gacatatgtcgtgtttgacaccgacacatatgattacactaa-ttatgtgattttctcaaattatt 30103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 30522920 - 30522973
Alignment:
Q  222 ccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||| ||||| ||||||| |||||||||||  |||||||| |||||||||||    
T  30522920 ccaacatatatagttacactgaattatgtgattttctcaaataattagcggtgt 30522973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 30982878 - 30982935
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtg 274  Q
    ||||||| |||| |||||||||||| || ||||||||  |||||||| ||||||||||    
T  30982878 cgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 36386205 - 36386262
Alignment:
Q  211 catgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    |||||||||||||||||| | |||||||||| ||||||||  |  |||||||||||||    
T  36386205 catgtccgacaccaacacctttaattacactgaattatgtccttttctcaaattatta 36386262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 3731250 - 3731190
Alignment:
Q  229 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    |||||||||| ||||||||||||||  ||||||||||| | || | ||||| |||||||||    
T  3731250 atataattaccctaaattatgtgattttctcaaattatcaacgttattggcgtgtcagtat 3731190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 5527234 - 5527174
Alignment:
Q  229 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    |||||||||| ||||||||||||||  ||||||||||| | || | ||||| |||||||||    
T  5527234 atataattaccctaaattatgtgattctctcaaattatcaacgttattggcgtgtcagtat 5527174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 46083991 - 46084027
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  46083991 cgacaccgacacatataattacactagattatgtgat 46084027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 318
Target Start/End: Complemental strand, 11685998 - 11685898
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtctgcgtccatatccgtgcttc 316  Q
    ||||||| ||||||||||||||||||||||||| ||   |||||||||||||||||||| |||||||||||  || |||| | |||| ||||||||||||    
T  11685998 cgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagt-gtcgtgtccgtgtccgtatccgtgcttc 11685900  T
Q  317 at 318  Q
    ||    
T  11685899 at 11685898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 196 - 276
Target Start/End: Original strand, 30502367 - 30502447
Alignment:
Q  196 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 276  Q
    |||| |||||| |||| ||||||||||| ||||||||||||||||| ||||| |||||  |||||||||||||||||||||    
T  30502367 gtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtt 30502447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 196 - 276
Target Start/End: Original strand, 30542710 - 30542790
Alignment:
Q  196 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 276  Q
    |||| |||||| |||| ||||||||||| ||||||||||||||||| ||||| |||||  |||||||||||||||||||||    
T  30542710 gtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtt 30542790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 16203786 - 16203861
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgt 283  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||  ||||||||||||||| |||| |||||||    
T  16203786 tgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgt 16203861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 3966562 - 3966492
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||| ||||||||||||||||| |||| ||||||  |||||||||||||||||||| |||||||||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagt 3966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 285
Target Start/End: Original strand, 28588616 - 28588742
Alignment:
Q  160 atgaagcatg-acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatct 258  Q
    |||||||||| ||||||||   |||| |||||| |||||||  || || |||| ||||||||||| |||| |||||||||||| |||||||||||  |||    
T  28588616 atgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttct 28588715  T
Q  259 caaattattagcggtgttggcatgtca 285  Q
    |||||||||| |||||| ||| |||||    
T  28588716 caaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 27144514 - 27144452
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||| ||| |||||||    
T  27144514 acacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagt 27144452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 36838602 - 36838544
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  36838602 cgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 43564976 - 43564904
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||||||| | || || ||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||    
T  43564976 attaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgat 43564904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 27932331 - 27932236
Alignment:
Q  180 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||| |||||||  ||||  |||| ||||||||||||| |  | |||||||||| |||||||| ||  ||||||||||||||||||||    
T  27932331 aattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaattttctcaaattattagcggtgt 27932236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 6471889 - 6471947
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| ||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgt 6471947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 12264837 - 12264899
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||||||||| ||| |||| ||  |||||||| |||||||||||||||||||||||    
T  12264837 acacatataattacactgaatcatgtaattttctcaaataattagcggtgttggcatgtcagt 12264899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 21191020 - 21191126
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    ||||||||||| | || || |||||  |||  ||||||||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||||    
T  21191020 attaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggca 21191119  T
Q  281 tgtcagt 287  Q
    |||||||    
T  21191120 tgtcagt 21191126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 23221047 - 23220973
Alignment:
Q  212 atgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 286  Q
    |||||| ||||| |||||||| || |||||||||||||||||  | |||||||||||||||||| | ||||||||    
T  23221047 atgtccaacaccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtcgacatgtcag 23220973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 23012393 - 23012461
Alignment:
Q  202 gacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 270  Q
    ||||| |||| ||||| ||||| ||||||||||||||| |||||||| ||||  |||||||||||||||    
T  23012393 gacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 12927722 - 12927659
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 271  Q
    ||||||||| |||||  ||| |||||||||||||||||||| ||||  ||||||||||||||||    
T  12927722 tgtcatgtctgacactgacatatataattacactaaattatatgattttctcaaattattagcg 12927659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 287
Target Start/End: Complemental strand, 17123128 - 17123037
Alignment:
Q  196 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||| |||||| | || ||||| ||||| ||| ||||||||  |||  ||||||||||  |||||||||||||||||||||||| |||||||    
T  17123128 gtgtcggacatgtttcgtgtccaacaccgacatatataattgtacttgattatgtgattttctcaaattattagcggtgttggcgtgtcagt 17123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 275
Target Start/End: Original strand, 18421825 - 18421899
Alignment:
Q  201 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||| |||| |||||||| || |||||||||||||||||  ||||||||||  ||||||||||| ||| ||||    
T  18421825 ggacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattatcagcagtgt 18421899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 39205939 - 39205881
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||||||||||||||||  |||||| ||||  ||||||||||||||| ||||    
T  39205939 cgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgt 39205881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 17593725 - 17593778
Alignment:
Q  220 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 273  Q
    |||||||| ||||||||||||| ||||| |||||  ||||||||||||||||||    
T  17593725 caccaacatatataattacactgaattacgtgattttctcaaattattagcggt 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 35017085 - 35017044
Alignment:
Q  228 catataattacactaaattatgtgatgatctcaaattattag 269  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattattag 35017044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 14873575 - 14873527
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattat 266  Q
    |||||| ||||||||||||||||||||||||||| |  |||||||||||    
T  14873575 gacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 296
Target Start/End: Original strand, 21576736 - 21576824
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtc 296  Q
    |||| ||||||||| | |||| | |||||||||| |||||||||||  | ||||||||||||| |||||||| | ||||| ||| ||||    
T  21576736 tgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgttcgtgtc 21576824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 296
Target Start/End: Original strand, 24906292 - 24906380
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtc 296  Q
    |||||||||||| ||| |||| | |||||||||| |||||||| ||  | ||||||||||| | |||||||| ||||||| ||| ||||    
T  24906292 tgtcatgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtc 24906380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 275
Target Start/End: Complemental strand, 42893477 - 42893361
Alignment:
Q  160 atgaagcatg-acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatct 258  Q
    |||||||||| |||||| | | ||||||||||| ||||||| |||||  |||  |||| |||||| |||| | ||||||||||  ||||||||||  | |    
T  42893477 atgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgatttttt 42893378  T
Q  259 caaattattagcggtgt 275  Q
    |||||||||||| ||||    
T  42893377 caaattattagctgtgt 42893361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 14674313 - 14674258
Alignment:
Q  232 taattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||||||||||||||  | ||||||||||||| |||| ||| |||||||    
T  14674313 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 14674258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 296
Target Start/End: Complemental strand, 26312832 - 26312749
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtc 296  Q
    ||||||||||| | ||||||||||||||| |||||  ||||  |||||||||||| ||||| | ||||| ||||| | ||||||    
T  26312832 tgtccgacaccgatacatataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagtgtccatgtc 26312749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 6035541 - 6035472
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||| ||| ||||||||||||| |||||| | ||  |||||||||||||||||||| ||| |||||||    
T  6035541 cgacaccgacaaatataattacactgaattatattatt-tctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 6247685 - 6247611
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||| |||| | |||||||||| |||||||||||  | ||||||||||||  |||| ||| |||||||    
T  6247685 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagt 6247611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 19579760 - 19579702
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||| |||| | ||||| ||||||||||||||||  ||||||||||||||| ||||    
T  19579760 cgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgt 19579702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 32766943 - 32767001
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||| |||||||||||||||| | |||| || |||  ||||||||||||||||||||    
T  32766943 cgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgt 32767001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 33178088 - 33178014
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||| |||| | ||||||||||||||||||||||  | | ||||||||||  |||| ||| |||||||    
T  33178088 tgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 41091265 - 41091315
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||||||||| |||||||||||  |||||||| |||||| ||||    
T  41091265 acacatataattacactgaattatgtgattttctcaaatcattagcagtgt 41091315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 21194087 - 21194176
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 270  Q
    ||||||||||  | |||||  ||||| |||| ||||| ||||||| || |||||||||||| ||| |||||||  |||||||||| ||||    
T  21194087 attaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgattttctcaaattactagc 21194176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 38749565 - 38749630
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||||||||||||||||| | |||||||| ||  | ||||||||||| |||||| | ||||||    
T  38749565 acaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtcgacatgtc 38749630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 2577190 - 2577238
Alignment:
Q  227 acatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||| ||||||||||||||||| ||  ||||||||||||| ||||||    
T  2577190 acatatgattacactaaattatgtcattttctcaaattattatcggtgt 2577238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 15410450 - 15410518
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||||||||||| |||||||| ||| || | ||  ||| |||||||||||||||| ||| |||||||    
T  15410450 acaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagt 15410518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 28262408 - 28262468
Alignment:
Q  229 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    |||||||||| ||||||||||||||  ||||||||||| | || | ||||| |||||||||    
T  28262408 atataattaccctaaattatgtgattttctcaaattatcaacgttattggcgtgtcagtat 28262468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 213 - 296
Target Start/End: Complemental strand, 31018653 - 31018570
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtc 296  Q
    ||||||||||| |||| |||||||||||||||| |||||||  ||| |||||||||||||||||||| ||||||| | ||||||    
T  31018653 tgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtccatgtc 31018570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 37411252 - 37411313
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 286  Q
    ||||||||||| ||||| |||||||||||  |||||||||||||||||||| ||||||||||    
T  37411252 acacatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcag 37411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 269
Target Start/End: Complemental strand, 5367287 - 5367199
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    ||||||||||| | || || ||| || |||| ||||||||||| ||||||||||||||||| |||||||||||   |||||||||||||    
T  5367287 attaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 21616813 - 21616754
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||| ||| ||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtc 21616754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 2438683 - 2438777
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||| | ||||| |||||| |||| ||||||||||| |||| | |||||||||| |||||||||||  | | ||||||||||| ||||    
T  2438683 attaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgt 2438777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 30404814 - 30404920
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    ||||||| ||| ||||||| |||||| |||| |||||||| || |||| | |||||||||| |||||||||||  | ||||||||||| | |||| |||     
T  30404814 attaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcg 30404913  T
Q  281 tgtcagt 287  Q
    |||||||    
T  30404914 tgtcagt 30404920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 44860379 - 44860321
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||| ||||||||||||||||| ||||||| |||  ||||||||||||||||||||    
T  44860379 cgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgt 44860321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 18276579 - 18276510
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||| ||||| ||||||||||| ||||| |||||  |||||||||||||||||||| ||||| |||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagt 18276510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 23718087 - 23718027
Alignment:
Q  215 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||| |||| ||||||||||||||||| ||||||||||   ||||||||||||||||||||    
T  23718087 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgt 23718027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 24105759 - 24105699
Alignment:
Q  215 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||| |||| ||||||||||||||||| ||||||||||   ||||||||||||||||||||    
T  24105759 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgt 24105699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 34691801 - 34691861
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 273  Q
    ||||||||||| ||||||||||||||||| |||||| ||||  | ||||||||||||||||    
T  34691801 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 34714213 - 34714273
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 273  Q
    ||||||||||| ||||||||||||||||| |||||| ||||  | ||||||||||||||||    
T  34714213 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 36281734 - 36281678
Alignment:
Q  227 acatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgt 283  Q
    |||||| ||||||||||||||||||||  ||||||||||||| |||| |||||||||    
T  36281734 acatatgattacactaaattatgtgattttctcaaattattaacggtattggcatgt 36281678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 36409641 - 36409728
Alignment:
Q  231 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtctgcgtccatatccgtgcttcata 319  Q
    |||||||||||||||||||||||  | ||||||||| |||||||| ||||||| ||||| | |||| | |||  |||||||||||||||    
T  36409641 ataattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtc-gtgtctgtatccgtgcttcata 36409728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 39279732 - 39279665
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 286  Q
    ||||| ||||||||||||||||| |||||| ||||  ||||| ||||||| |||||||||| ||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattattaacggtgttggcgtgtcag 39279665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 2665897 - 2665947
Alignment:
Q  226 cacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 276  Q
    ||||||||||||||||||||||||||||  ||| |||||||||| ||||||    
T  2665897 cacatataattacactaaattatgtgattttctaaaattattagtggtgtt 2665947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 18420436 - 18420506
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    ||||| |||| ||||||| || | |||||||||||  ||||||||||||||| |||||||| |||||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagtat 18420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 35449564 - 35449502
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||||||||| |||| ||||||  ||||||||||||| | |||||||| |||||||    
T  35449564 acacatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagt 35449502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 38117123 - 38117229
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    ||||||||||| | ||||| |||||  |||  |||||||||||||||| | |||||||||  || ||||||||  | ||||||||||||| |||| |||     
T  38117123 attaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcg 38117222  T
Q  281 tgtcagt 287  Q
    |||||||    
T  38117223 tgtcagt 38117229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 277
Target Start/End: Complemental strand, 18571076 - 18570971
Alignment:
Q  172 actctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 271  Q
    |||||| | ||||||||||| ||||||| ||| || | || ||| ||||||  |||||||| |||||| | |||||||| ||  ||||||||||||| ||    
T  18571076 actcttcagattaggcgtgtcctggtgtcggatatgtatcgtgttcgacactgacacatatgattacattgaattatgtcattttctcaaattattatcg 18570977  T
Q  272 gtgttg 277  Q
    ||||||    
T  18570976 gtgttg 18570971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 20242723 - 20242763
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  20242723 tgtccgacaccgacacatataattacactgaattatgtgat 20242763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 20922924 - 20922964
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  20922924 tgtccgacacagacacatataattacactaaattatgtgat 20922964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 21148499 - 21148439
Alignment:
Q  229 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    ||||||||||  |||||||||||||  ||||||||||| | || |||||||||||||||||    
T  21148499 atataattaccataaattatgtgattttctcaaattatcaacgttgttggcatgtcagtat 21148439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 21782832 - 21782888
Alignment:
Q  231 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||| |||||||||||  ||||||||||||||| |||| ||| |||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagt 21782888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 28677958 - 28677910
Alignment:
Q  227 acatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgt 28677910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 34784982 - 34785018
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||| |||||||||||||||||||||||||||||    
T  34784982 cgacaccgacacatataattacactaaattatgtgat 34785018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 40361745 - 40361805
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    |||| |||| |||||||||| |||||||||||||||||||||| ||  | |||||||||||    
T  40361745 tgtcgtgtctgacaccaacagatataattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 30527603 - 30527646
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    |||||||||||||||||||||||| ||||  |||||||||||||    
T  30527603 acacatataattacactaaattatatgattttctcaaattatta 30527646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 18840977 - 18841114
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    |||||| |||| | ||||| |||||| |||| |||| |||||| |||| | |||||||||| |||||||| ||  | ||||||||||||  ||||  ||     
T  18840977 attaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcg 18841076  T
Q  281 tgtcagtattcatgtctgcgtccatatccgtgcttcata 319  Q
    ||||||| | |||||| | |||| ||| |||||||||||    
T  18841077 tgtcagtgtccatgtc-gtgtccgtatacgtgcttcata 18841114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 18889592 - 18889646
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcgg 272  Q
    |||||| |||||||| |||||||| |||||||||||  |||||| ||||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttattagcgg 18889646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 31808128 - 31808078
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||||||||| |||||||||||  | | ||||||||||||||||    
T  31808128 acacatataattacactgaattatgtgattttgttaaattattagcggtgt 31808078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 34993935 - 34994038
Alignment:
Q  170 acactctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    |||||| || |||||||||||| |  |||| ||||| ||||| ||| ||||||  ||||||||||||||| | |||||||      | ||||||||||||    
T  34993935 acactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaattatg------tttcaaattattag 34994028  T
Q  270 cggtgttggc 279  Q
    ||||||||||    
T  34994029 cggtgttggc 34994038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 37559072 - 37558966
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    |||| |||||| | ||||| |||||  ||||| |||||||||| |||| | |||||||| | |||||||||||  |  |||||||||||| |||| |||     
T  37559072 attaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcg 37558973  T
Q  281 tgtcagt 287  Q
    |||||||    
T  37558972 tgtcagt 37558966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 275
Target Start/End: Original strand, 42832277 - 42832334
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||| |||| |||||||||||| || ||||| ||  ||||||||||||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgt 42832334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 18622665 - 18622629
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgat 253  Q
    |||||||||||| |||||||||||| |||||||||||    
T  18622665 cgacaccaacacgtataattacactgaattatgtgat 18622629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 23921316 - 23921256
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 273  Q
    ||||||||||||| |  |||||||||||| |||||||| ||  ||||||||||||| ||||    
T  23921316 tgtccgacaccaatatttataattacactgaattatgtaattttctcaaattattaacggt 23921256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 29176472 - 29176544
Alignment:
Q  196 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    |||| |||||| || | ||||| |||||||||| |||||||||||| ||||||||||   | |||||||||||    
T  29176472 gtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatgtgaccttttcaaattatta 29176544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 21880247 - 21880157
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 271  Q
    ||||||||||| ||||||| |||||| |||| ||||||||||| |||| | |||||||||| |||||||| ||  ||||||||||||||||    
T  21880247 attaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagcg 21880157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 20549854 - 20549792
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||| ||||||||||||||||| ||||| |||||  ||||||||||||||||||||    
T  20549854 tgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgt 20549792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 27093377 - 27093471
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||| |||| || |||| ||||| ||||| ||||  ||||| || ||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  27093377 attaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgt 27093471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 27184924 - 27184830
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||| |||| || |||| ||||| ||||| ||||  ||||| || ||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  27184924 attaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgt 27184830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 32287427 - 32287521
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||| |||| | ||||| |||||  |||||||||||||||| ||||||||| || |||| |||||||||||  ||||| ||||||||||||||    
T  32287427 attaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggtgt 32287521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 3721156 - 3721099
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 270  Q
    ||||||||||| ||||||||||||| |||||||||||||||  |||||||||||||||    
T  3721156 tgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 15902879 - 15902811
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||| |||||||||||||||||||||||||||||  | |||||||||||  ||||| |||||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagt 15902811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 275
Target Start/End: Original strand, 42720853 - 42720948
Alignment:
Q  180 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||| ||||||| ||||||| ||| ||||  |||| |||||  ||||||||||||||| | |||||||||||  | ||||||||||||||||||    
T  42720853 aattagacgtgttccggtgttgtacacatgttgtgtcagacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgt 42720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 8160471 - 8160417
Alignment:
Q  221 accaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||||||||||||||||||||| ||  ||| ||||||||||||||||    
T  8160471 accaacacatataattacactaaattatgtaattttcttaaattattagcggtgt 8160417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 201 - 287
Target Start/End: Complemental strand, 22484100 - 22484014
Alignment:
Q  201 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||| ||||||||| |||||| ||||||||||||| ||| |||||||  ||  ||| |||||||||||||||| ||| |||||||    
T  22484100 ggacatgtgtcatgtctgacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagt 22484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 26733399 - 26733305
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||||  || | ||||||  ||| ||||||||||| |||||| |||||| ||| |||||||||||  | ||||||||||||||||||    
T  26733399 attaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgt 26733305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 32308171 - 32308109
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||| ||||||||| |||||||||||  |||||||||||||||||||| ||| |||||||    
T  32308171 acacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 285
Target Start/End: Complemental strand, 1433554 - 1433445
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacacca-----acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||| ||||| ||||||| ||||| ||||| |||||||||| |     |||||||||||||||| |||| |||||||  ||||||||||||| ||||||    
T  1433554 attagacgtgtcctggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgt 1433455  T
Q  276 tggcatgtca 285  Q
     ||| |||||    
T  1433454 cggcgtgtca 1433445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 2948739 - 2948670
Alignment:
Q  220 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    |||| ||||||||||||||||||||||| |||||  ||| ||||||| |||||||| ||| |||||||||    
T  2948739 caccgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtcggcgtgtcagtat 2948670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 5233686 - 5233637
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  5233686 acaccaacacatataattacactagattatgtgattttctcaaattatta 5233637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 275
Target Start/End: Complemental strand, 5835321 - 5835248
Alignment:
Q  202 gacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||| |||||||||| |||||| ||||||||||||||||| |||||||| ||  ||||||| |||||| |||||    
T  5835321 gacacatgtcatgtctgacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgt 5835248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 7328691 - 7328744
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 270  Q
    ||||||| |||||||||||||||||||||||||| ||  |||||||||||||||    
T  7328691 cgacaccgacacatataattacactaaattatgttattttctcaaattattagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 285
Target Start/End: Complemental strand, 25482006 - 25481893
Alignment:
Q  172 actctttaaattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 271  Q
    ||||||| ||||| |||||||    ||| ||||| || || |||||||||||||||| | |||||||||| |||||||||||  | |||||||||||||     
T  25482006 actctttgaattaagcgtgtttcaatgtcggacacatatcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagct 25481907  T
Q  272 gtgttggcatgtca 285  Q
    |||| ||| |||||    
T  25481906 gtgtcggcgtgtca 25481893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 18213029 - 18213069
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  18213029 tgtccgacaccgacacatataattacactaaattatgtgat 18213069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 38143286 - 38143231
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    |||| |||||||||||||||||||||| |||||||||||||  | |||||||||||    
T  38143286 tgtctgacaccaacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 15680890 - 15680832
Alignment:
Q  195 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||| |||||  |||| ||||||||||| |||| ||||||||||||||||||||||||    
T  15680890 ggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgat 15680832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 22602710 - 22602780
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||| ||||||||||||||||| |||||||||||  |||||||| |||  |||||| ||| |||||||    
T  22602710 cgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagt 22602780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 22868093 - 22868031
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||||||||| |||||||||||  ||||| |||||||| ||||| ||| |||||||    
T  22868093 acacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagt 22868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 9482996 - 9482939
Alignment:
Q  214 gtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 271  Q
    |||||||||| ||||||||||||||||| |||| ||||||  ||||||||||| ||||    
T  9482996 gtccgacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcg 9482939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 275
Target Start/End: Complemental strand, 19206108 - 19206051
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||| ||||||||||||| | | |||||||||||  ||||||||||||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgt 19206051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 29787373 - 29787427
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||||  |||||||| |||||||||||  ||||||||||||||||||||    
T  29787373 acaccaacacata--attacactgaattatgtgattttctcaaattattagcggtgt 29787427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 5548727 - 5548671
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcat 281  Q
    ||||||||||||||||| |||||| ||||  ||||||||||| |||||||| |||||    
T  5548727 acacatataattacactgaattatttgattttctcaaattatcagcggtgtcggcat 5548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 17307952 - 17307904
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaatta 265  Q
    ||||||||||||||||||||||||| |||||||| ||  ||||||||||    
T  17307952 cgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 17851482 - 17851434
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggt 273  Q
    ||||||||||||||||| |||||||||||  ||| ||||||||||||||    
T  17851482 acacatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 33384584 - 33384640
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||||||||||||||||||||||  |||  ||||| ||||||| ||||||    
T  33384584 acaccaacacatataattacactaaattataggattttctcagattattaacggtgt 33384640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 16341555 - 16341504
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    |||||||  |||||||||||||||| |||||||||||  |||||||||||||    
T  16341555 cgacaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 35297672 - 35297723
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    ||||||||||||||||||||| | | |||||||||||  |||||||||||||    
T  35297672 cgacaccaacacatataattataatgaattatgtgattttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 598303 - 598209
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||| | ||||| |||||  |||| |||| |||||| |||| || ||||||| | ||||| |||||  ||| ||||||||||||||||    
T  598303 attaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgt 598209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 6630920 - 6630982
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||||||||| ||||| ||||   |||||||||||||| ||||| ||| |||||||    
T  6630920 acacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagt 6630982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 8090021 - 8090083
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||||||||||| | ||||||| ||||| |||||  |||||||||| ||| |||||    
T  8090021 tgtccgacaccaacacatacagttacactgaattacgtgatattctcaaattactagtggtgt 8090083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 19992060 - 19992002
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||| |||| |||||||||||| || ||||||||  ||||||||||||||| ||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgt 19992002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 27945100 - 27945030
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||| |||| | |||||||||| |||||||| ||  |||||||||||||| ||||| ||| |||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagt 27945030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 28155633 - 28155571
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||| |||| | |||||||||  |||||||| ||  ||||||||||||||||||||    
T  28155633 tgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgt 28155571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 49107879 - 49107822
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||| ||||||||||| ||||| ||||||||| |  ||||||||||||||||||||    
T  49107879 cgacaccgacacatataatcacactcaattatgtg-ttttctcaaattattagcggtgt 49107822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 2425736 - 2425805
Alignment:
Q  220 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    |||| ||||||||| || |||| |||||||||||  ||||||||||||| |||||  ||| |||||||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtat 2425805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 37870956 - 37870891
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 278  Q
    ||||||||||| ||||| |||||||||| |||| |||||||  |||||||| |||||  |||||||    
T  37870956 tgtccgacaccgacacacataattacacgaaatcatgtgattttctcaaatgattagtagtgttgg 37870891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 39138524 - 39138467
Alignment:
Q  196 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||| ||||| | || ||||||||||| ||| ||||||||||||| |||||||||||    
T  39138524 gtgttagacatgtatcgtgtccgacaccgacatatataattacactgaattatgtgat 39138467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 1401094 - 1401030
Alignment:
Q  207 atgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 271  Q
    ||||| |||| |||||| | || |||||||||||| ||||||||||   ||||||||||||||||    
T  1401094 atgtcgtgtcggacaccgatacttataattacactgaattatgtgagtttctcaaattattagcg 1401030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 2424659 - 2424619
Alignment:
Q  231 ataattacactaaattatgtgatgatctcaaattattagcg 271  Q
    ||||||||||| |||||||||||  ||||||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattattagcg 2424619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 8046030 - 8046099
Alignment:
Q  216 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    |||| ||||||||| ||||||||||| ||||    |||  |||||||||||||| ||||||||| |||||||||    
T  8046030 ccgataccaacacagataattacactgaatt----gattttctcaaattattagtggtgttggcgtgtcagtat 8046099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 23191945 - 23191897
Alignment:
Q  227 acatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||| |||||||||| || ||||||||  ||||||||||||||||||||    
T  23191945 acatgtaattacactgaaatatgtgattttctcaaattattagcggtgt 23191897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 285
Target Start/End: Complemental strand, 24339701 - 24339633
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 285  Q
    ||||||| |||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| |||||    
T  24339701 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 24339633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 268
Target Start/End: Original strand, 27732207 - 27732290
Alignment:
Q  180 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    ||||||| |||| ||||||| ||||||||||| |||     ||| ||||||||||||||||| |||||||| ||  ||| |||||||||    
T  27732207 aattaggtgtgtcctggtgtcggacatatgtcgtgt-----accgacacatataattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 41020591 - 41020519
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||| ||||| | |||||| || || |||| ||| | ||||| || ||||||||||||||||||||||||||    
T  41020591 attagacgtgtcccggtgttagatatgtgtcgtgttcaacaccgacgcatataattacactaaattatgtgat 41020519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 32804548 - 32804608
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 285  Q
    |||||||||||||||||||||||||||||  ||||||||||||| |||||| |||||||||    
T  32804548 acacatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtca 32804608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 40993299 - 40993371
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||||||| | ||||| |||||| |||| ||||||||||| ||||||||||||||||| |||||||||||    
T  40993299 attaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgat 40993371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 49505150 - 49505210
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 273  Q
    ||||||||||  |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  49505150 tgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 7928513 - 7928451
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||| ||||||||||||||||| |||||||||||  | ||||||||||||||||||    
T  7928513 tgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgt 7928451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 11313800 - 11313858
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  11313800 cgacactaacacatataattacactaaattatgtgattttctcaaattattagcagtgt 11313858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 8039835 - 8039903
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 285  Q
    ||||||| ||||||||||||||||| |||||| | ||  |||||||||||||||||||||||| |||||    
T  8039835 cgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgtca 8039903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 8383320 - 8383248
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 285  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||||||||||||||||| ||| |||||    
T  8383320 tgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtca 8383248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 25948887 - 25948957
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||||||||| |||||||||||| |||||||||||  | ||||||||||||| || | |||||||||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagt 25948957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 3631777 - 3631708
Alignment:
Q  183 taggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtga 252  Q
    ||||||||| ||||||| |||||| |||| ||||||||||   |||||||||||||||| ||||||||||    
T  3631777 taggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatgtga 3631708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 4201459 - 4201394
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 278  Q
    |||| |||||||||| ||||||||||||| |||||||||||  | ||||||||||| |||||||||    
T  4201459 tgtcggacaccaacatatataattacacttaattatgtgattttttcaaattattaacggtgttgg 4201394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 45451634 - 45451553
Alignment:
Q  195 ggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgtt 276  Q
    ||||| |||||| |||| ||||||||||| |||||||| |||| ||| || ||||||||  ||||||||||||||| |||||    
T  45451634 ggtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattagcagtgtt 45451553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 319
Target Start/End: Original strand, 4987294 - 4987394
Alignment:
Q  220 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattc-atgtctgcgtccatatccgtgcttcat 318  Q
    ||||||||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| ||||||| ||| | |||||  ||| ||||||||||||||    
T  4987294 caccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgttctaggtctgtatccgtatccgtgcttcat 4987393  T
Q  319 a 319  Q
    |    
T  4987394 a 4987394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 285
Target Start/End: Complemental strand, 10455849 - 10455781
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 285  Q
    ||||||||||||||||||||||||| | |||| ||||  ||||| ||||||||| |||||||| |||||    
T  10455849 cgacaccaacacatataattacacttagttatatgattttctcatattattagcagtgttggcgtgtca 10455781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 15314876 - 15314912
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgat 253  Q
    |||||||||||||||||||||||||||||||||||||    
T  15314876 cgacaccaacacatataattacactaaattatgtgat 15314912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 269
Target Start/End: Complemental strand, 55401170 - 55401082
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    |||||||||||   ||||| |||||  |||| ||||||||||| |||| | ||||||||||||||||||||||  | ||||||||||||    
T  55401170 attaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 55401082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 275
Target Start/End: Original strand, 8789541 - 8789608
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||| ||||||||||| ||||||||||||||||  |||||||||||  ||||||||||| ||| ||||    
T  8789541 tgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgt 8789608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 285
Target Start/End: Complemental strand, 8842402 - 8842321
Alignment:
Q  203 acatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 285  Q
    |||| |||| |||| |||||| ||| |||||||||||| ||||||||||||  ||  |||||||||||||||| |||||||||    
T  8842402 acatgtgtcgtgtctgacaccgacatatataattacaccaaattatgtgattttc-aaaattattagcggtgtcggcatgtca 8842321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 11666003 - 11665949
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcg 271  Q
    ||||||| |||||||||||||||||||||| ||||||  | ||||||||||||||    
T  11666003 cgacaccgacacatataattacactaaattgtgtgattttatcaaattattagcg 11665949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 16192750 - 16192808
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||| ||||||||||||||||||| |||||||| ||  ||||||||||||| ||||||    
T  16192750 cgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgt 16192808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 35223006 - 35222961
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    |||||||||||||||| ||||||||||||||| | |||||||||||    
T  35223006 tgtcatgtccgacaccgacacatataattacattgaattatgtgat 35222961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 10955047 - 10954911
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    ||||||||||| |  |||| |||||  |||| ||||||||||| |||| | | |||||||| |||||||||||  | ||||||||||||  |||| |||     
T  10955047 attaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcg 10954948  T
Q  281 tgtcagtattcatgt-ctgcgtccatatccgtgcttc 316  Q
    ||||||| ||| ||| | | |||| ||||||||||||    
T  10954947 tgtcagtgttcgtgtccggtgtccgtatccgtgcttc 10954911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 268
Target Start/End: Complemental strand, 25093582 - 25093510
Alignment:
Q  196 gtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    |||| |||||| |||  ||||||||||| ||||||||||||||||| |||| ||||||  |||||||| ||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcatta 25093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 27277852 - 27277896
Alignment:
Q  231 ataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagtgt 27277896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 6780415 - 6780466
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaatt 264  Q
    ||||||||||||||||||||||||||||| || || |||||  |||||||||    
T  6780415 tgtccgacaccaacacatataattacactgaactacgtgattttctcaaatt 6780466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 1509598 - 1509540
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||| |||| | ||||||||||||||||||||||  | ||||||||||||| ||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 1509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 10690274 - 10690320
Alignment:
Q  229 atataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||||| |||||||||||  ||||| ||||||||||||||    
T  10690274 atataattacactgaattatgtgattttctcagattattagcggtgt 10690320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 25064954 - 25064900
Alignment:
Q  231 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 285  Q
    |||||||||||||||||||||||  | |||||| ||||||||||| ||| |||||    
T  25064954 ataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtca 25064900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 28678362 - 28678292
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||| ||||||| ||||| |||||||||||||||  | | ||||||||||| | || |||||||||||    
T  28678362 cgacaccgacacatacaattatactaaattatgtgattttattaaattattagcagcgtcggcatgtcagt 28678292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 34307788 - 34307838
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||| |||||||||||| || ||||||||  ||||||||||||||||||||    
T  34307788 acacttataattacactgaaatatgtgattttctcaaattattagcggtgt 34307838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 289
Target Start/End: Complemental strand, 11610561 - 11610508
Alignment:
Q  236 tacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    |||||| |||||||||||  | | |||||||||||||||||||| |||||||||    
T  11610561 tacactgaattatgtgatttttttaaattattagcggtgttggcgtgtcagtat 11610508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 12704056 - 12703999
Alignment:
Q  227 acatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||||||||||| ||||||||| |  |||||||||||||| ||||| ||| ||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtc 12703999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 21720822 - 21720753
Alignment:
Q  219 acaccaacacatataa-ttacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||| ||||||||| ||||||| ||||||| |||  ||||||||||||| |||||| ||| |||||||    
T  21720822 acaccaccacatataaattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagt 21720753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 253
Target Start/End: Original strand, 24633364 - 24633437
Alignment:
Q  180 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgat 253  Q
    |||||||||||| | |||||| ||||  |||| ||||| ||||| ||||||||||||||| | ||||| |||||    
T  24633364 aattaggcgtgtaccggtgttagacaagtgtcgtgtccaacaccgacacatataattacattgaattacgtgat 24633437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 38731278 - 38731221
Alignment:
Q  216 ccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggt 273  Q
    |||||||| |||||||||| |||||| |||||||||||  | | ||||||||||||||    
T  38731278 ccgacaccgacacatataactacactgaattatgtgattttttaaaattattagcggt 38731221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 289
Target Start/End: Complemental strand, 7171596 - 7171489
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    |||||||||||   ||||| |||||  |||| |||||||||||||||| | |||||||||  |||||| ||||  | ||||||||  ||| |||| ||||    
T  7171596 attaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgat-ttttcaaattacaagctgtgtcggca 7171498  T
Q  281 tgtcagtat 289  Q
    |||||||||    
T  7171497 tgtcagtat 7171489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 287
Target Start/End: Original strand, 8587015 - 8587091
Alignment:
Q  211 catgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||||| |||| | |||||||||| |||||||||||  | |||||||| |||  |||| ||| |||||||    
T  8587015 catgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagt 8587091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 296
Target Start/End: Original strand, 10268501 - 10268565
Alignment:
Q  232 taattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtc 296  Q
    ||||||||||||||||||||||  | ||||||||||| | |||| ||| ||||||| | ||||||    
T  10268501 taattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtc 10268565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 13620772 - 13620836
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    |||||||||| | |||| ||| |||||||  |||||||||| ||||||||| | |||||||||||    
T  13620772 acacatataactgcactgaatcatgtgattttctcaaattactagcggtgtcgacatgtcagtat 13620836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 24205004 - 24205111
Alignment:
Q  180 aattaggcgtgttctggtgttggacatatgtca-tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttgg 278  Q
    |||||||||||| ||||||| |||||   |||| |||||||||| | ||| ||||||||||||  ||||||| ||  ||||||||||||| | |||| ||    
T  24205004 aattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacacga-cacttataattacactgtattatgtcattttctcaaattattatccgtgtcgg 24205102  T
Q  279 catgtcagt 287  Q
    | |||||||    
T  24205103 cgtgtcagt 24205111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 25775602 - 25775497
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatga-tctcaaattattagcggtgttggc 279  Q
    ||||||||||| ||||||| |||||   | | ||||||||||| |||| | |||||||||| ||||||||||| | | |||||||||||   ||||||||    
T  25775602 attaggcgtgtcctggtgtcggacac--gacgtgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggc 25775505  T
Q  280 atgtcagt 287  Q
     |||||||    
T  25775504 gtgtcagt 25775497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 7e-16; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 13844592 - 13844663
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| |||| ||| ||||    
T  13844592 tgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 33405348 - 33405435
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    ||||| ||||| | |||||  ||||| |||| ||||||||||| ||||||||||||||||||||||||||| |  |||||||||||||    
T  33405348 attagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 34897148 - 34897086
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||| | ||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  34897148 tgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgt 34897086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 226 - 284
Target Start/End: Original strand, 39954288 - 39954346
Alignment:
Q  226 cacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 20785473 - 20785529
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcat 281  Q
    ||||||||||||||| |||||||||||||   |||||||||||||||||||||||||    
T  20785473 acacatataattacattaaattatgtgatttcctcaaattattagcggtgttggcat 20785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 27101589 - 27101506
Alignment:
Q  201 ggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtca 285  Q
    |||||| |||||||||||||||  |||| ||||||| ||||||||||||||||  | |||||||||||||||||| ||| |||||    
T  27101589 ggacatgtgtcatgtccgacactgacacctataatt-cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtca 27101506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 24362210 - 24362269
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||| ||| ||||    
T  24362210 acacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtc 24362269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 14731763 - 14731713
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattagcagtgt 14731713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 269
Target Start/End: Complemental strand, 14134795 - 14134706
Alignment:
Q  180 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    |||||||||||| ||||||  |||||  |||| |||  |||||| ||| ||||||||||||| |||||||||||  ||||||||||||||    
T  14134795 aattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 4786336 - 4786408
Alignment:
Q  215 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||| ||||||||||||||||| |||||||||||  ||| |||||||||  ||||| ||| |||||||    
T  4786336 tccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagt 4786408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 31236573 - 31236649
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    |||||| |||| ||||||||||||||| | |||||||||||  ||||||||||||||| |||| ||| |||| ||||    
T  31236573 tgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtat 31236649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 3025619 - 3025557
Alignment:
Q  208 tgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 270  Q
    |||| ||||||||||  |||| |||||||||||| |||||||||||  |||||||||||||||    
T  3025619 tgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 15816129 - 15816199
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||| |||| ||||||||||||||||||||||||  | ||||||||||||  |||| ||| |||||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagt 15816199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 31557091 - 31556986
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    ||||||||||| ||||||| |||||| |||| |||| |||||| | || | |||||||||| |||||||||||  | ||||||||||| | |||| |||     
T  31557091 attaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgat-ttttcaaattattaactgtgtcggcg 31556993  T
Q  281 tgtcagt 287  Q
    |||||||    
T  31556992 tgtcagt 31556986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 36450718 - 36450824
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    ||||||||||| ||||||| |||||   ||| ||||||||||| |||| | |||||||||| |||| ||||||  | ||||||||||||  |||| |||     
T  36450718 attaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcg 36450817  T
Q  281 tgtcagt 287  Q
    |||||||    
T  36450818 tgtcagt 36450824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 11803316 - 11803267
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    ||||||||||||||||||||||| |||||||||||  ||| |||||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 20679396 - 20679465
Alignment:
Q  218 gacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||| |||| |||||||||||| || ||||||||  |||||||||||||| ||||| | |||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagt 20679465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 4611583 - 4611535
Alignment:
Q  227 acatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||||||| |||||||| ||  ||||||||||||||||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggtgt 4611535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 284
Target Start/End: Complemental strand, 5813688 - 5813584
Alignment:
Q  180 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 279  Q
    |||||||||||| | ||||| |||||  |||| ||||||||||| |||| | || |||||||||| |||||||   | ||||||||||||| |||| |||    
T  5813688 aattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggc 5813589  T
Q  280 atgtc 284  Q
     ||||    
T  5813588 gtgtc 5813584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 7442902 - 7442838
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgt 283  Q
    |||||||||| | |||||||||| |||||||| ||  | | ||||||||||||||||||||||||    
T  7442902 acaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgttggcatgt 7442838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 284
Target Start/End: Complemental strand, 18407815 - 18407711
Alignment:
Q  180 aattaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 279  Q
    |||||||||||| || |||| |||||| |||| |||||| || | |||| | |||||||||| |||||||||||  | |  |||||||||| |||| |||    
T  18407815 aattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcggc 18407716  T
Q  280 atgtc 284  Q
    |||||    
T  18407715 atgtc 18407711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 29447503 - 29447467
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||||||||||||||||||||| |||||||||||    
T  29447503 cgacaccaacacatataattacacttaattatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 8343037 - 8342978
Alignment:
Q  211 catgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagc 270  Q
    ||||| ||||||| |||| | ||||||||||||||||||||||  | |||||||||||||    
T  8343037 catgtacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 8342978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 11927086 - 11927137
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    ||||||| ||||||||||||||||| |||||||||||  | |||||||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 20873132 - 20873077
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    ||||||||||| |||| | ||||||||||||||||||||||  | |||||||||||    
T  20873132 tgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 12606825 - 12606887
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||| |||||| ||||||||||||||| | |||||| ||||  ||||||||||||||| ||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttctcaaattattagcagtgt 12606887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 34222998 - 34222944
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggc 279  Q
    ||||||||||||||||| |||||||||||  | | |||||||||||| |||||||    
T  34222998 acacatataattacacttaattatgtgattttattaaattattagcgatgttggc 34222944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 36934729 - 36934671
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    |||| |||||||||||||||||| | |||||||||||  | || |||||||||||||||    
T  36934729 cgacgccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgt 36934671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 40332286 - 40332200
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatt 267  Q
    |||||||| || | ||||| |||||  |||| ||||| ||||| |||| | |||||||||| |||||||||||  ||||||||||||    
T  40332286 attaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 926785 - 926858
Alignment:
Q  214 gtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||||||| |||| |||||||||||| ||  ||| |||  ||||||||||||||  |||||||| |||||||    
T  926785 gtccgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagt 926858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 11833925 - 11833888
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgt 250  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  11833925 tgtccgacaccaacacatataattacactgaatcatgt 11833888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 22596056 - 22595983
Alignment:
Q  214 gtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||||||| | |||||||||| |||||||| ||  | | ||||||||||| |||| ||| |||||||    
T  22596056 gtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagt 22595983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 30077385 - 30077454
Alignment:
Q  215 tccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||||  |||| | |||||||||| |||||||||||| | ||||||||||||| | |||||| ||||    
T  30077385 tccgacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtc 30077454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 2572056 - 2572108
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    ||||||| |||| | ||||||||||||||||||||||  | ||||||||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 2572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 4948715 - 4948659
Alignment:
Q  213 tgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattag 269  Q
    ||||||||||| |||| | |||||||||| |||||||||||  | ||||||||||||    
T  4948715 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 7658520 - 7658464
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||| ||| ||||||||||||| |||||||| ||  |||||||||||||| |||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgt 7658464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 8847315 - 8847279
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  8847315 cgacaccgacacatataattacactgaattatgtgat 8847279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 12570736 - 12570792
Alignment:
Q  219 acaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||| ||||||||||||| ||||||| | |  ||| ||||||||||||||||    
T  12570736 acaccaacatatataattacacttaattatgcgtttttcttaaattattagcggtgt 12570792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 24447076 - 24447016
Alignment:
Q  229 atataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    |||||||||| ||||||||||||||  ||||||||||| | || | ||||| |||||||||    
T  24447076 atataattaccctaaattatgtgattttctcaaattatcaacgttattggcgtgtcagtat 24447016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 25172698 - 25172770
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    ||||||| ||||||||||||||| |||| ||||| ||  | ||||||||||||| ||||  |||| |||||||    
T  25172698 cgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtcagcatatcagtat 25172770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 26902175 - 26902211
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgat 253  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  26902175 cgacaccgacacatataattacactgaattatgtgat 26902211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 27213598 - 27213534
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtat 289  Q
    ||||||||||||||| | |||||||||||  ||| ||||||||||| |||| ||| |||| ||||    
T  27213598 acacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtat 27213534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 287
Target Start/End: Original strand, 31109512 - 31109588
Alignment:
Q  211 catgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||||  ||||||||| ||| ||| |||| | ||||  ||||||||||||| |||||| ||| |||||||    
T  31109512 catgtccgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagt 31109588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 37283824 - 37283880
Alignment:
Q  231 ataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||||||| |||||||||||  ||||| |||||||||||||   ||||||||||    
T  37283824 ataattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagt 37283880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 284
Target Start/End: Complemental strand, 1733 - 1636
Alignment:
Q  187 cgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||| || |||| |||||| |||| ||||||||||| |||| |||||||| || ||||||| ||||  ||||||||||||| |||||| ||| ||||    
T  1733 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgtc 1636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 268
Target Start/End: Complemental strand, 70373 - 70286
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    ||||||| ||| ||||||| |||||  |||| ||||||||||| |||| |||||||||||| |||||||| ||  | |||||||||||    
T  70373 attaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattatta 70286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 9747 - 9814
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||| ||||||||||||||||| ||||| |||||  |||||||||||||| || || ||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcggcatgtc 9814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 44533 - 44583
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||||||||||||| |||||||||||  ||||||||| ||||||||||    
T  44533 acacatataattacactgaattatgtgattttctcaaatttttagcggtgt 44583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 8893 - 8787
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    |||||||||||   ||||| |||||  |||| ||||||||||| |||| | |||||||||||||| || ||||  | ||||||||||||| |||| |||     
T  8893 attaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcg 8794  T
Q  281 tgtcagt 287  Q
    |||||||    
T  8793 tgtcagt 8787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 287
Target Start/End: Complemental strand, 90938 - 90832
Alignment:
Q  181 attaggcgtgttctggtgttggacatatgtcatgtccgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggca 280  Q
    |||||||||||| |||||| |||||  |||  |||| |||| | ||| ||||||||||||| |||||| ||||  |||||||||||||  ||||||||      
T  90938 attaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattttctcaaattattaatggtgttggtg 90839  T
Q  281 tgtcagt 287  Q
    |||||||    
T  90838 tgtcagt 90832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 284
Target Start/End: Complemental strand, 99952 - 99885
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtc 284  Q
    ||||||||||||||||||||||| | |||||||| ||  ||| ||||||||| |||||| | ||||||    
T  99952 cgacaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtcgacatgtc 99885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 135312 - 135370
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgt 275  Q
    ||||||| ||||||||||||||||  |||||||||||  ||||||||||||||| ||||    
T  135312 cgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgt 135370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 263380 - 263442
Alignment:
Q  225 acacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||| |||||||||||| ||||||||| |  ||||||||||||||| |||||| |||||||||    
T  263380 acacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagt 263442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 25768 - 25819
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattatta 268  Q
    ||||||| |||| ||||||||||||||||||||||||  |||| ||||||||    
T  25768 cgacaccgacacttataattacactaaattatgtgattttctctaattatta 25819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 318
Target Start/End: Complemental strand, 51864 - 51769
Alignment:
Q  223 caacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagtattcatgtctgcgtccatatccgtgcttcat 318  Q
    |||||| | |||||||||| |||||||||||  | ||||||||||||| |||| ||| ||||||| | | |||| |  |||||||| |||||||||    
T  51864 caacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccatatctgtgcttcat 51769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 92851 - 92796
Alignment:
Q  232 taattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    |||||||||| |||||||| ||  |||||||||||||||||||| ||| |||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagt 92796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 53236 - 53170
Alignment:
Q  220 caccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcag 286  Q
    |||| |||| |||||||||||| |||||||||||  |||||||||||| ||||| | ||| ||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 241653 - 241583
Alignment:
Q  217 cgacaccaacacatataattacactaaattatgtgatgatctcaaattattagcggtgttggcatgtcagt 287  Q
    ||||||| ||||  |||||||||||||||||||||||  |  |||||||||||| |||| ||| |||||||    
T  241653 cgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagt 241583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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