View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1511_low_113 (Length: 292)
Name: NF1511_low_113
Description: NF1511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1511_low_113 |
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Alignment Details
Target: chr6 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 10976891 - 10977154
Alignment:
| Q |
19 |
gcaacatgccacaagcttggcctcgttttgatagattatccttatgaatcaaataaattccatgatggatctctagaaagcaatgcacattccaataggt |
118 |
Q |
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| T |
10976891 |
gcaacatgccacaagcttggcctcgttttgatagattatccttatgaatgaaataaattccatgatggatctctagaaagcaatgcacattccaataggt |
10976990 |
T |
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| Q |
119 |
cgcttcaatgtgttgcagatgatgcgattgaaggagacaccatggaacaccataaccatatggagagggttgaacttgagcacactgttgcacatgaggc |
218 |
Q |
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| T |
10976991 |
cgcttcaatgtgttgcagatgatgcgattgaaggagacaccatggaacaccataaccatatggagagggttgaacttgagcacactgttgcacatgaggc |
10977090 |
T |
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| Q |
219 |
tattcagtttgattttgaggagctcatcttcaaagagcaacaacatgattaatatgctcctttg |
282 |
Q |
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| T |
10977091 |
tattcagtttgattttgaggagctcatcttcaaagagcaacaacatgattaatatgctcctttg |
10977154 |
T |
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