View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1511_low_137 (Length: 268)
Name: NF1511_low_137
Description: NF1511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1511_low_137 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 48399270 - 48399523
Alignment:
| Q |
1 |
tctatttcaataaaattatccttattatataaacccatttgtttaagttaaaatgattacgataagaacttaatagctttaatacaacaacttctttcaa |
100 |
Q |
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| T |
48399270 |
tctatttcaataaaattatcct-attatataaacccatttgtttaagttaaaatgattacgataagaacttaatagctttaatacaacaacttctttcaa |
48399368 |
T |
|
| Q |
101 |
cagcttgaatccaaaatgtgatagtgatgtttgtgtccaacagcacctaacacgtttgacacgacaccacaaatgtcccactttggtttaatcacaagtt |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48399369 |
cagcttgaatccaaaatgtgatagtgctgtttgtgtccaacagcacctaacacgtttgacacgacaccacaaatgtcccactttggtttaatcacaagtt |
48399468 |
T |
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| Q |
201 |
ttacattttagcgcttgtttttgtcctatgtatgtatgtaaaacttgacgaagaattat |
259 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
48399469 |
ttacattttagcgcttgtttttgtcc----tatgtatgtaaaacttgacgaagaattat |
48399523 |
T |
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