View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1511_low_160 (Length: 246)
Name: NF1511_low_160
Description: NF1511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1511_low_160 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 136 - 230
Target Start/End: Original strand, 36162039 - 36162133
Alignment:
| Q |
136 |
agaacaaaaataaatactccaaaacattgttcctaattcatcaaagtatattatatgatgcaaaatttgactaaatatctagtgctgctacctta |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
36162039 |
agaacaaaaataaatactccaaaacattgttcgtaattcatcaaagtatattatatgatgcaaaatttgactaaatatctagtgcagctacctta |
36162133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University