View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1511_low_33 (Length: 469)

Name: NF1511_low_33
Description: NF1511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1511_low_33
NF1511_low_33
[»] chr3 (15 HSPs)
chr3 (1-136)||(53343106-53343242)
chr3 (185-379)||(24733881-24734080)
chr3 (1-136)||(52717624-52717760)
chr3 (322-424)||(24677062-24677164)
chr3 (322-426)||(24634432-24634536)
chr3 (1-136)||(32558219-32558356)
chr3 (3-73)||(7050462-7050533)
chr3 (335-427)||(24672908-24673000)
chr3 (322-425)||(24656537-24656640)
chr3 (323-426)||(24680103-24680206)
chr3 (371-428)||(24687701-24687758)
chr3 (92-136)||(45781551-45781595)
chr3 (93-136)||(7050983-7051026)
chr3 (92-136)||(25694865-25694909)
chr3 (92-136)||(52717123-52717167)
[»] chr5 (3 HSPs)
chr5 (1-136)||(38558947-38559084)
chr5 (92-132)||(6695792-6695832)
chr5 (92-136)||(6697372-6697416)
[»] chr8 (4 HSPs)
chr8 (1-136)||(40600568-40600704)
chr8 (95-136)||(14706279-14706320)
chr8 (74-123)||(16910287-16910336)
chr8 (74-130)||(27244277-27244333)
[»] chr1 (2 HSPs)
chr1 (1-136)||(8641812-8641948)
chr1 (42-136)||(45500661-45500758)
[»] chr4 (1 HSPs)
chr4 (46-135)||(21838206-21838295)
[»] chr7 (1 HSPs)
chr7 (44-136)||(22297851-22297943)
[»] chr6 (1 HSPs)
chr6 (81-131)||(14050191-14050241)
[»] chr2 (4 HSPs)
chr2 (92-136)||(1522396-1522440)
chr2 (42-130)||(10174650-10174738)
chr2 (92-136)||(1521650-1521694)
chr2 (42-130)||(6850289-6850377)


Alignment Details
Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 53343242 - 53343106
Alignment:
Q  1 acaaggatagtgtgcaaaaatatacttgtgttctcacttt-gtctctaacacatctaaacctttaatttaaatctgatggtgtataaaggtagtccaccg 99  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  53343242 acaaggatagtgtgcaaaaatatacttgtgttctcacttttgtctctaacacatttaaacctttaatttaaatctgatggtgtataaaggtggtccaccg 53343143  T
Q  100 atgaaccatttatttgatggttcatcctagaatccac 136  Q
    |||||||| ||||||||||||||||||||||||||||    
T  53343142 atgaaccacttatttgatggttcatcctagaatccac 53343106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 185 - 379
Target Start/End: Complemental strand, 24734080 - 24733881
Alignment:
Q  185 taaagcatcacagttttgttcgaaagtttcacaacacttcctacgtcacatattttccatcagnnnnnnnnnt--ctatttatggacaac-tctttannn 281  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||            ||||||||||||||| |||||        
T  24734080 taaagcatcacagttttgttcgaaagttggacaacactttctacgtcacatattttccatcagaaaaaaaaaaaactatttatggacaacctcttttatt 24733981  T
Q  282 nnnnnn--caaaactcattctccaatcacaggatcaagggaaacacaaaatgagtatgcataaagcttatacaattctgatgagcatggaattggcttcg 379  Q
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24733980 ttttttttcaaaactcattctccaatcacaggatcaagggaaacacaaaatgagtatgcataaagcttatacaattctgatgagcatggaattggcttcg 24733881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 52717624 - 52717760
Alignment:
Q  1 acaaggatagtgtgcaaaaatatacttgtgttctcactttgtc-tctaacacatctaaacctttaatttaaatctgatggtgtataaaggtagtccaccg 99  Q
    |||||||||||||||| || |||||||||||||||| ||| |  ||||||||||||||||||||||||||||||  |||||||| ||| || ||||| |     
T  52717624 acaaggatagtgtgcagaagtatacttgtgttctcatttttttgtctaacacatctaaacctttaatttaaatcgaatggtgtacaaaagtggtccatcc 52717723  T
Q  100 atgaaccatttatttgatggttcatcctagaatccac 136  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  52717724 atgaaccatttagttgatggttcaccctagaatccac 52717760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 322 - 424
Target Start/End: Complemental strand, 24677164 - 24677062
Alignment:
Q  322 acacaaaatgagtatgcataaagcttatacaattctgatgagcatggaattggcttcgattggaattaagtatcaaggatcaaatacaaaccccttccaa 421  Q
    |||||||||||||||||||||||||||||| |||||||| ||| |||| |||||||| ||||| ||||||| |||||| ||||| || ||||| ||||||    
T  24677164 acacaaaatgagtatgcataaagcttatactattctgatcagcttggagttggcttccattggtattaagtgtcaaggttcaaacaccaacccattccaa 24677065  T
Q  422 caa 424  Q
    |||    
T  24677064 caa 24677062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 426
Target Start/End: Complemental strand, 24634536 - 24634432
Alignment:
Q  322 acacaaaatgagtatgcataaagcttatacaattctgatgagcatggaattggcttcgattggaattaagtatcaaggatcaaatacaaaccccttccaa 421  Q
    ||||||||||||||| |||||||| ||||| |||||||||||  |||| |||| ||| |||||||||| ||||||||| |||||||  ||||| ||||||    
T  24634536 acacaaaatgagtatccataaagcatatactattctgatgagtttggagttgggttcaattggaattatgtatcaaggttcaaataacaaccctttccaa 24634437  T
Q  422 caatc 426  Q
    |||||    
T  24634436 caatc 24634432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 32558356 - 32558219
Alignment:
Q  1 acaaggatagtgtgcaaaaatatacttgtgttctcactttgtct--ctaacacatctaaacctttaatttaaatctgatggtgtataaaggtagtccacc 98  Q
    |||||||||||||||| || ||||||| |||||||| ||| | |  |||||| ||||||||||||||||||||||  |||||||| ||| ||  |||  |    
T  32558356 acaaggatagtgtgcagaagtatacttatgttctcattttttttgtctaacatatctaaacctttaatttaaatcgaatggtgtacaaaagtgatccgtc 32558257  T
Q  99 gatgaaccatttatttgatggttcatcctagaatccac 136  Q
    | ||||||| ||| ||||||||||| ||||||||||||    
T  32558256 ggtgaaccacttagttgatggttcaccctagaatccac 32558219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 7050533 - 7050462
Alignment:
Q  3 aaggatagtgtgcaaaaatatacttgtgttctcactttgtc-tctaacacatctaaacctttaatttaaatc 73  Q
    |||||||||||||| || |||||||||||||||| ||| |  ||||||||||||||||||||||||||||||    
T  7050533 aaggatagtgtgcagaagtatacttgtgttctcatttttttgtctaacacatctaaacctttaatttaaatc 7050462  T

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Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 24673000 - 24672908
Alignment:
Q  335 atgcataaagcttatacaattctgatgagcatggaattggcttcgattggaattaagtatcaaggatcaaatacaaaccccttccaacaatca 427  Q
    ||||||||||| ||||| ||||| |||| | | || || ||||| |||||||||||||||||||| | ||| || ||||||||||||||||||    
T  24673000 atgcataaagcatatactattcttatgaccttagagttagcttcaattggaattaagtatcaaggtttaaacaccaaccccttccaacaatca 24672908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 425
Target Start/End: Complemental strand, 24656640 - 24656537
Alignment:
Q  322 acacaaaatgagtatgcataaagcttatacaattctgatgagcatggaattggcttcgattggaattaagtatcaaggatcaaatacaaaccccttccaa 421  Q
    |||||||||||||||||||||||| ||||| ||||| |||| | | || |||| ||| |||||| | ||||| ||||| | ||| || ||||||||||||    
T  24656640 acacaaaatgagtatgcataaagcatatactattcttatgaccttagagttgggttcaattggagtaaagtaccaaggtttaaacaccaaccccttccaa 24656541  T
Q  422 caat 425  Q
    ||||    
T  24656540 caat 24656537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 426
Target Start/End: Complemental strand, 24680206 - 24680103
Alignment:
Q  323 cacaaaatgagtatgcataaagcttatacaattctgatgagcatggaattggcttcgattggaattaagtatcaaggatcaaatacaaaccccttccaac 422  Q
    |||||||||||| |  ||||||| ||||| ||||| |||||| |||| |||   || |||||||||| ||||||||| ||| |||| ||||| |||||||    
T  24680206 cacaaaatgagtttctataaagcatatactattctcatgagcttggagttgagctcaattggaattatgtatcaaggttcagataccaaccctttccaac 24680107  T
Q  423 aatc 426  Q
    ||||    
T  24680106 aatc 24680103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 24687758 - 24687701
Alignment:
Q  371 ttggcttcgattggaattaagtatcaaggatcaaatacaaaccccttccaacaatcac 428  Q
    |||| |||||||||||||||||||||||| | ||| || || ||||||||||||||||    
T  24687758 ttgggttcgattggaattaagtatcaaggtttaaacactaatcccttccaacaatcac 24687701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 45781595 - 45781551
Alignment:
Q  92 gtccaccgatgaaccatttatttgatggttcatcctagaatccac 136  Q
    |||||||| |||||||||| |||||||||||| ||||||||||||    
T  45781595 gtccaccggtgaaccatttgtttgatggttcaccctagaatccac 45781551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 7050983 - 7051026
Alignment:
Q  93 tccaccgatgaaccatttatttgatggttcatcctagaatccac 136  Q
    |||||||||||| || ||||||||||||||| ||||||||||||    
T  7050983 tccaccgatgaatcacttatttgatggttcaccctagaatccac 7051026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 25694865 - 25694909
Alignment:
Q  92 gtccaccgatgaaccatttatttgatggttcatcctagaatccac 136  Q
    |||||||||||||||| |||| ||||||||||  |||||||||||    
T  25694865 gtccaccgatgaaccacttatatgatggttcactctagaatccac 25694909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 52717167 - 52717123
Alignment:
Q  92 gtccaccgatgaaccatttatttgatggttcatcctagaatccac 136  Q
    |||||||| |||| || ||||||||||||||| ||||||||||||    
T  52717167 gtccaccggtgaatcagttatttgatggttcaccctagaatccac 52717123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 3e-55; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 38559084 - 38558947
Alignment:
Q  1 acaaggatagtgtgcaaaaatatactt-gtgttctcacttt-gtctctaacacatctaaacctttaatttaaatctgatggtgtataaaggtagtccacc 98  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38559084 acaaggatagtgtgcaaaaatatactttgtgttctcacttttgtctctaacacatctaaacctttaatttaaatctgatggtgtataaaggtggtccacc 38558985  T
Q  99 gatgaaccatttatttgatggttcatcctagaatccac 136  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  38558984 gatgaaccacttatttaatggttcatcctagaatccac 38558947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 6695832 - 6695792
Alignment:
Q  92 gtccaccgatgaaccatttatttgatggttcatcctagaat 132  Q
    |||||||| ||||||| ||||||||||||||| ||||||||    
T  6695832 gtccaccggtgaaccacttatttgatggttcaccctagaat 6695792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 6697372 - 6697416
Alignment:
Q  92 gtccaccgatgaaccatttatttgatggttcatcctagaatccac 136  Q
    |||| ||| ||||||| ||||||||||||||| ||||||||||||    
T  6697372 gtccgccggtgaaccacttatttgatggttcaccctagaatccac 6697416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 2e-47; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 40600568 - 40600704
Alignment:
Q  1 acaaggatagtgtgcaaaaatatacttgtgttctcacttt-gtctctaacacatctaaacctttaatttaaatctgatggtgtataaaggtagtccaccg 99  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| | ||||||||    
T  40600568 acaaggatattgtgcaaaaatatatttgtgttctcacttttgtctctaacacgtctaaacctttaatttaaatttgatggtgtataaagatggtccaccg 40600667  T
Q  100 atgaaccatttatttgatggttcatcctagaatccac 136  Q
    |||||||| |||||||||||||||||||| |||||||    
T  40600668 atgaaccacttatttgatggttcatcctaaaatccac 40600704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 14706320 - 14706279
Alignment:
Q  95 caccgatgaaccatttatttgatggttcatcctagaatccac 136  Q
    ||||||||||| |||| |||||||||||| ||||||||||||    
T  14706320 caccgatgaactatttgtttgatggttcaccctagaatccac 14706279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 16910336 - 16910287
Alignment:
Q  74 tgatggtgtataaaggtagtccaccgatgaaccatttatttgatggttca 123  Q
    ||||||| || |||||| |||||||||||||||| ||| |||||||||||    
T  16910336 tgatggtatacaaaggtggtccaccgatgaaccacttagttgatggttca 16910287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 27244277 - 27244333
Alignment:
Q  74 tgatggtgtataaaggtagtccaccgatgaaccatttatttgatggttcatcctaga 130  Q
    ||||||| |||||| || |||||||| ||||| ||||| ||||||||||| ||||||    
T  27244277 tgatggtatataaaagtggtccaccggtgaactatttaattgatggttcaccctaga 27244333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 8641812 - 8641948
Alignment:
Q  1 acaaggatagtgtgcaaaaatatacttgtgttctcactttgtc-tctaacacatctaaacctttaatttaaatctgatggtgtataaaggtagtccaccg 99  Q
    ||||||||||||| |  || |||||||||||||||| ||| |  ||||||||||||||||||||||||||||||  |||||||| ||| || ||||| ||    
T  8641812 acaaggatagtgtcctgaagtatacttgtgttctcatttttttgtctaacacatctaaacctttaatttaaatcaaatggtgtacaaaagtggtccatcg 8641911  T
Q  100 atgaaccatttatttgatggttcatcctagaatccac 136  Q
       ||||| ||| ||||||||||| ||||||||||||    
T  8641912 gaaaaccacttagttgatggttcaccctagaatccac 8641948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 45500661 - 45500758
Alignment:
Q  42 tctctaacacatctaaacctttaatttaaatctgatggtgtataaaggtagtc---caccgatgaaccatttatttgatggttcatcctagaatccac 136  Q
    |||||||||||| ||||| ||||||||||||| |||| |||||||| || |||   || |  ||||||| ||||||||||||||| |||| |||||||    
T  45500661 tctctaacacatttaaacttttaatttaaatcggatgatgtataaaagtggtccatcatcagtgaaccacttatttgatggttcaacctaaaatccac 45500758  T

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Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 21838206 - 21838295
Alignment:
Q  46 taacacatctaaacctttaatttaaatct-gatggtgtataaaggtagtccaccgatgaaccatttatttgatggttcatcctagaatcca 135  Q
    |||| ||||||||||||||| | | |||| |||||| |||||| || |||||||||||||||| ||| |||||||||||||||||||||||    
T  21838206 taactcatctaaacctttaaat-atatcttgatggtatataaaagtggtccaccgatgaaccacttaattgatggttcatcctagaatcca 21838295  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 22297851 - 22297943
Alignment:
Q  44 tctaacacatctaaacctttaatttaaatct-gatggtgtataaaggtagtccaccgatgaaccatttatttgatggttcatcctagaatccac 136  Q
    |||||| ||||||||||||||| | | |||| |||||| |||||| || |||||||||||||||| ||| |||||||||||  |||||||||||    
T  22297851 tctaactcatctaaacctttaaat-atatcttgatggtatataaaagtggtccaccgatgaaccacttaattgatggttcactctagaatccac 22297943  T

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Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 14050241 - 14050191
Alignment:
Q  81 gtataaaggtagtccaccgatgaaccatttatttgatggttcatcctagaa 131  Q
    ||||||| ||||| ||||||||||||| || ||||||||||||||||||||    
T  14050241 gtataaaagtagttcaccgatgaaccacttgtttgatggttcatcctagaa 14050191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000003; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 1522396 - 1522440
Alignment:
Q  92 gtccaccgatgaaccatttatttgatggttcatcctagaatccac 136  Q
    |||||||| ||||||| || |||||||||||||||||||||||||    
T  1522396 gtccaccggtgaaccacttgtttgatggttcatcctagaatccac 1522440  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 10174650 - 10174738
Alignment:
Q  42 tctctaacacatctaaacctttaatttaaatctgatggtgtataaaggtagtccaccgatgaaccatttatttgatggttcatcctaga 130  Q
    |||||||| |||| |||||||| |  | ||||||| |||  ||||| || |||||||| ||||||||||| ||||||||||| ||||||    
T  10174650 tctctaactcatccaaaccttttaaattaatctgacggtaaataaaagtggtccaccggtgaaccatttagttgatggttcaccctaga 10174738  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 1521694 - 1521650
Alignment:
Q  92 gtccaccgatgaaccatttatttgatggttcatcctagaatccac 136  Q
    |||||||| ||||||| || |||||||||||| ||||||||||||    
T  1521694 gtccaccggtgaaccacttgtttgatggttcaccctagaatccac 1521650  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 6850377 - 6850289
Alignment:
Q  42 tctctaacacatctaaacctttaatttaaatctgatggtgtataaaggtagtccaccgatgaaccatttatttgatggttcatcctaga 130  Q
    |||||||| |||| |||||||| |  | ||||||| |||  ||||| || |||||||||||||||| |||||| ||| |||| ||||||    
T  6850377 tctctaactcatccaaaccttttaaattaatctgacggtaaataaaagtggtccaccgatgaaccacttattttatgcttcaccctaga 6850289  T

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