View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1511_low_40 (Length: 445)
Name: NF1511_low_40
Description: NF1511
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1511_low_40 |
 | |
|
| [»] scaffold1207 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 401; Significance: 0; HSPs: 32)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 16 - 428
Target Start/End: Complemental strand, 10494641 - 10494229
Alignment:
| Q |
16 |
gatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctca |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494641 |
gatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctca |
10494542 |
T |
|
| Q |
116 |
acctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcc |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10494541 |
acctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcc |
10494442 |
T |
|
| Q |
216 |
cccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagaca |
315 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
10494441 |
cccaaggtgagtgttacctgcagtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccagatcaaagaca |
10494342 |
T |
|
| Q |
316 |
aaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccag |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10494341 |
aaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccag |
10494242 |
T |
|
| Q |
416 |
caatagcaccagc |
428 |
Q |
| |
|
||||||||||||| |
|
|
| T |
10494241 |
caatagcaccagc |
10494229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 16 - 428
Target Start/End: Complemental strand, 13333723 - 13333311
Alignment:
| Q |
16 |
gatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctca |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
13333723 |
gatgaagaaaagtcgattcccataaataaagcatctacttcaacagtggtgacaaaagaaaaggagagtatccttttttccctctcacaggcagttctca |
13333624 |
T |
|
| Q |
116 |
acctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcc |
215 |
Q |
| |
|
||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
13333623 |
acctccttaaggattttgggttcccactgatatcgacgttattcttctttttgaactcctcaacaaaatagttcaccattctgttatcgaagtcttctcc |
13333524 |
T |
|
| Q |
216 |
cccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagaca |
315 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
13333523 |
cccaaggtgagtgtttcctgcggtggcttttacttcaaagacatcacccataattgtaaggatagacacatcaaaagtaccaccacccagatcaaagaca |
13333424 |
T |
|
| Q |
316 |
aaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccag |
415 |
Q |
| |
|
||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
13333423 |
aaaatatttcgcttaccatcacaatcacgtctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgatattaaggccag |
13333324 |
T |
|
| Q |
416 |
caatagcaccagc |
428 |
Q |
| |
|
||||||||||||| |
|
|
| T |
13333323 |
caatagcaccagc |
13333311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 16 - 428
Target Start/End: Original strand, 8667320 - 8667732
Alignment:
| Q |
16 |
gatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctca |
115 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||| |||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8667320 |
gatgaacaaaagtcgattcccgtaaataaagcatctacctcaacagtggtaacaaaagcaaaagagagtatcctttttgccctctcacaggcagttctca |
8667419 |
T |
|
| Q |
116 |
acctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcc |
215 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |
|
|
| T |
8667420 |
acctccttaaggattttgggttctgactgatgtccactttattcttcttttttaactcctcaacaaaatagttcaccattctgttatcgaagtcctcgcc |
8667519 |
T |
|
| Q |
216 |
cccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagaca |
315 |
Q |
| |
|
||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||| |
|
|
| T |
8667520 |
cccaaggtgagtgtttcctgcagtggctttcacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtcccgccacccagatcaaagaca |
8667619 |
T |
|
| Q |
316 |
aaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccag |
415 |
Q |
| |
|
|||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
8667620 |
aaaatatttcggctaccatcacagtcatttctcttgtcaaggccatatgcaatagctgccgcagtaggttcattgattatccgaatgacattaagtccag |
8667719 |
T |
|
| Q |
416 |
caatagcaccagc |
428 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
8667720 |
caatagtaccagc |
8667732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 16 - 428
Target Start/End: Original strand, 8654351 - 8654763
Alignment:
| Q |
16 |
gatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctca |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654351 |
gatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtgacaaaagtaaaagagagtatcctttttgccctctcacaggcagttctca |
8654450 |
T |
|
| Q |
116 |
acctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcc |
215 |
Q |
| |
|
||||||||||||||||||| || || || || ||||| ||||||||||||||||||||||| ||||| || | ||||||||||||||| ||||| ||||| |
|
|
| T |
8654451 |
acctccttaaggattttgggttaccgctaatttccactttattcttctttttgaactcctctacaaagtagtacaccattctgttatcaaagtcttctcc |
8654550 |
T |
|
| Q |
216 |
cccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagaca |
315 |
Q |
| |
|
||| ||||| ||||| || || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| || |
|
|
| T |
8654551 |
ccctaggtgcgtgtttccagcagtggcttttacgtcaaagacatcacccttaattgtgagtatagacacatcaaaagtaccaccaccaagatcaaatacc |
8654650 |
T |
|
| Q |
316 |
aaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccag |
415 |
Q |
| |
|
|||||||| || ||||| ||| | | ||||| ||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||| ||||| |||| |
|
|
| T |
8654651 |
aaaatattccgtttaccatcatagttacttcgcttgtcaaggccatatgcaatagctgcggcagtaggttcattgagtatccgaatgacgttaagtccag |
8654750 |
T |
|
| Q |
416 |
caatagcaccagc |
428 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
8654751 |
caatggcaccagc |
8654763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 25 - 425
Target Start/End: Original strand, 8659273 - 8659673
Alignment:
| Q |
25 |
aagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctcctta |
124 |
Q |
| |
|
||||| |||||| |||||||| |||||||||||| ||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8659273 |
aagtctattccctgaaataaagaatcgacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacaggcagttctcaacctcctta |
8659372 |
T |
|
| Q |
125 |
aggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtg |
224 |
Q |
| |
|
|||||||||| || ||||| |||||||| ||||||||||||||||||||||| ||||| || |||||||||||| |||| ||||||||||| |||||||| |
|
|
| T |
8659373 |
aggattttgggttaccactaatgtccactttattcttctttttgaactcctctacaaagtagttcaccattctgctatcaaagtcctctcctccaaggtg |
8659472 |
T |
|
| Q |
225 |
agtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatattt |
324 |
Q |
| |
|
|||||| || | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||||| |
|
|
| T |
8659473 |
agtgtttccagaagtggcttttacttcaaagacatcacccttcattgtaaggatagacacatcaaaagtaccaccaccaagatcaaagaccaaaatattt |
8659572 |
T |
|
| Q |
325 |
cggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcac |
424 |
Q |
| |
|
| ||||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||| |
|
|
| T |
8659573 |
tgtttaccatcacagtcacctctcttgtcaaaaccatatgcaatagctgcagcagtaggttcattaattatctgaatgacattaaggccagcaatggcac |
8659672 |
T |
|
| Q |
425 |
c |
425 |
Q |
| |
|
| |
|
|
| T |
8659673 |
c |
8659673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 25 - 425
Target Start/End: Original strand, 1301370 - 1301774
Alignment:
| Q |
25 |
aagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctcctta |
124 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
1301370 |
aagtcgattccctgaaataaagaatcgacctcaacggtggtgactaaagcaaaagagagtgtcctttttgccctctcacacgcaattctcaacctcctta |
1301469 |
T |
|
| Q |
125 |
aggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtg |
224 |
Q |
| |
|
||||||| | || ||||| |||||||| |||||||||||| |||||||||| ||||| || |||||||||| ||||| ||||||||||| |||||||| |
|
|
| T |
1301470 |
aggatttctggttaccactaatgtccactttattcttctttctgaactcctctacaaagtagctcaccattctattatcaaagtcctctcctccaaggtg |
1301569 |
T |
|
| Q |
225 |
agtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatattt |
324 |
Q |
| |
|
||| || || | ||||||||||||||||||||||| ||||| || || |||||||||||||||||||||||||| || | |||||||| |||||||| |
|
|
| T |
1301570 |
agtatttccaccagtggcttttacttcaaagacatcgcccttgatggtaaggatagacacatcaaaagtaccaccgccaaggtcaaagaccaaaatattc |
1301669 |
T |
|
| Q |
325 |
cggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcag----taggttcattgattattcgaatgacattaaggccagcaata |
420 |
Q |
| |
|
|| ||||| ||||| |||||||||||||||| ||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
1301670 |
cgtttaccatcacagtcacttctcttgtcaaaaccatacgcaatagctgcagcagtagctaggttcattaattatctgaatgacattaaggccagcaatt |
1301769 |
T |
|
| Q |
421 |
gcacc |
425 |
Q |
| |
|
||||| |
|
|
| T |
1301770 |
gcacc |
1301774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 172 - 428
Target Start/End: Complemental strand, 8585817 - 8585561
Alignment:
| Q |
172 |
tcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattg |
271 |
Q |
| |
|
||||||||||| || |||| |||||||||||| |||||| |||||||||||||||| || || ||||| ||||| ||||||||||||||||| ||||||| |
|
|
| T |
8585817 |
tcctcaacaaagtagttcaacattctgttatcaaagtcccctcccccaaggtgagtatttccagcggttgctttaacttcaaagacatcacctttaattg |
8585718 |
T |
|
| Q |
272 |
tgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagc |
371 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| | |||||| |||||||||||||| | ||| ||||| | || | | ||||||||||||||||||||||| |
|
|
| T |
8585717 |
tgaggagagacacatcaaaagtcccaccaccaagatcaaacacaaaaatatttcgttcaccatcacagttacctttgttgtcaaggccatatgcaatagc |
8585618 |
T |
|
| Q |
372 |
tgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
||||||||| |||||||||||||| | || ||||||||||||||||| |||||||| |
|
|
| T |
8585617 |
tgcagcagtgggttcattgattatcctcataacattaaggccagcaatggcaccagc |
8585561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 192 - 428
Target Start/End: Original strand, 8628609 - 8628845
Alignment:
| Q |
192 |
cattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaa |
291 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| || || || |||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
8628609 |
cattctgttatcaaagtcctctccaccaaggtgagtatttccagcagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaa |
8628708 |
T |
|
| Q |
292 |
gtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattga |
391 |
Q |
| |
|
|| |||||||| | |||||| |||||||||||||| | ||| ||||| || | | |||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
8628709 |
gtcccaccaccaagatcaaacacaaaaatatttcgttcaccatcacacctacctttgttgtcaaggccatatgcaatagctgcagcagtggggtcattga |
8628808 |
T |
|
| Q |
392 |
ttattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
|||| | || ||||||||||||||||| |||||||| |
|
|
| T |
8628809 |
ttatcctcataacattaaggccagcaatggcaccagc |
8628845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 39 - 428
Target Start/End: Original strand, 3147188 - 3147585
Alignment:
| Q |
39 |
aaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattc |
138 |
Q |
| |
|
|||||||| ||| | ||||| |||||||| | || |||||| ||||| | |||||| || ||||| || ||| ||||||||||||||| | ||| ||| |
|
|
| T |
3147188 |
aaataaagaatctatctcaatggtggtgatgacagcaaaagatagtattcgttttgctctttcacacgccgttttcaacctccttaaggctcttgagttc |
3147287 |
T |
|
| Q |
139 |
ccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcgg |
238 |
Q |
| |
|
|||| ||||| || || |||||||| || |||||| |||| || |||||||| || ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
3147288 |
tcactaatgtctaccttgttcttcttcttaaactcccgtgcaaagtagttcaccatcctattatcaaagtcctctcccccaaggtgggtgtttcctgcga |
3147387 |
T |
|
| Q |
239 |
tggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggt----taccc- |
333 |
Q |
| |
|
|||| || |||| |||||| | | |||||||||| || | ||||||||||||||| ||||||||||| ||||||| ||||||||| || | ||| | |
|
|
| T |
3147388 |
tggccttaacttgaaagaccttatccttaattgtaagaagagacacatcaaaagtcccaccacccaagtcaaagataaaaatattacgctcctctacaca |
3147487 |
T |
|
| Q |
334 |
---tcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
|||||| | |||||||||| || ||||| |||||||||||||||||||||||||||||||| || || | |||||||||||||||| ||||||| |
|
|
| T |
3147488 |
attacacaattagttctcttgtccagtccatacgcaatagctgcagcagtaggttcattgattatccgcataatattaaggccagcaataacaccagc |
3147585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 38 - 428
Target Start/End: Original strand, 17260164 - 17260554
Alignment:
| Q |
38 |
taaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggatt |
137 |
Q |
| |
|
|||||||||| || |||||||| |||| ||| | | |||||| ||| |||||||||| | ||||| |||||||||||||||||||||| |||||| || |
|
|
| T |
17260164 |
taaataaagcgtctacctcaacattggtcacagaggcaaaagaaagtgtcctttttgctttttcacatgcagttctcaacctccttaaggcttttgggtt |
17260263 |
T |
|
| Q |
138 |
cccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcg |
237 |
Q |
| |
|
|||| | ||||||| || ||| | |||||| |||||| |||||||| | ||||||||| ||||| |||||||| |||||||| ||||||| || || |
|
|
| T |
17260264 |
cccaataatgtccaattttttcgttcttttgatctcctctacaaaatagtacaccattctattatcaaagtcctcacccccaagatgagtgtctccaccg |
17260363 |
T |
|
| Q |
238 |
gtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcac |
337 |
Q |
| |
|
||||| || ||||| ||||| | | |||||||||| | || ||||||||||||||| || ||||| | ||||||||||||||||| || ||| |
|
|
| T |
17260364 |
gtggccttaacttcgaagaccttatccttaattgtaacgagagacacatcaaaagtccccccaccaaggtcaaagacaaaaatattccgtacttaaacac |
17260463 |
T |
|
| Q |
338 |
aatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgatta--ttcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
||| | |||||||| |||||||||||||||||||||||||| |||||||||| |||| ||| || |||| ||||||||||||| ||||||| |
|
|
| T |
17260464 |
aattagttctcttgacaaggccatatgcaatagctgcagcaataggttcattaattaacttcaaa--acataaaggccagcaataacaccagc |
17260554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 306 - 428
Target Start/End: Complemental strand, 8671607 - 8671485
Alignment:
| Q |
306 |
atcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgaca |
405 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
8671607 |
atcaaagacaaaaatatttcggttaccttcacggtcatttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgaca |
8671508 |
T |
|
| Q |
406 |
ttaaggccagcaatagcaccagc |
428 |
Q |
| |
|
||||| |||||||||| |||||| |
|
|
| T |
8671507 |
ttaagtccagcaatagtaccagc |
8671485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 39 - 425
Target Start/End: Complemental strand, 27831119 - 27830733
Alignment:
| Q |
39 |
aaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattc |
138 |
Q |
| |
|
|||||| ||||| | ||||| || ||| ||| ||||||||||||| ||||||||||| ||||||| ||||||| |||||| |||| | |||| ||| |
|
|
| T |
27831119 |
aaataaggcatctatctcaatagtagtgtcaacagaaaaagagagtgtcctttttgccttctcacattaggttctcagcctcctcaaggctcttgggttc |
27831020 |
T |
|
| Q |
139 |
ccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcgg |
238 |
Q |
| |
|
||||| |||||||| | |||||||| |||||| |||| |||||||| |||||||| || ||||| ||||||||||| |||||||||||||| || || | |
|
|
| T |
27831019 |
ccactaatgtccactcttttcttcttcttgaacacctccacaaaatagttcaccatcctattatcaaagtcctctccaccaaggtgagtgtttccagcag |
27830920 |
T |
|
| Q |
239 |
tggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcaca |
338 |
Q |
| |
|
| || || |||| ||||| | | |||||||||| | | ||||||||||||||| |||||||| | ||||| ||||||||||| || | || | | |
|
|
| T |
27830919 |
ttgccttaacttggaagaccttatccttaattgtaacaagagacacatcaaaagtcccaccaccaaggtcaaacacaaaaatattccgttctccagtata |
27830820 |
T |
|
| Q |
339 |
atcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcacc |
425 |
Q |
| |
|
| ||| | |||||||||||||||||||||||||||||||||| || | ||||| || || ||||||||||||||||| ||||| |
|
|
| T |
27830819 |
ttttgttcccgtgtcaaggccatatgcaatagctgcagcagtaggctcgcttattatccgcataacattaaggccagcaatggcacc |
27830733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 38 - 428
Target Start/End: Original strand, 17267862 - 17268252
Alignment:
| Q |
38 |
taaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggatt |
137 |
Q |
| |
|
|||||||||| || |||||||| |||| ||| | | ||||| ||| |||||||||| | ||||| ||||||||||||||||| | || |||||| || |
|
|
| T |
17267862 |
taaataaagcgtctacctcaacattggtcacagaggcgaaagaaagtgtcctttttgctttttcacatgcagttctcaacctcctcatggcttttgggtt |
17267961 |
T |
|
| Q |
138 |
cccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcg |
237 |
Q |
| |
|
|||| || | || || || ||| |||||| |||||||||||||| | |||||||| ||||| |||||||| |||||||| ||||||| || || |
|
|
| T |
17267962 |
cccaacaattttcaatttttttttccttttgatttcctcaacaaaatagtataccattctattatcaaagtcctcacccccaagatgagtgtctccaccg |
17268061 |
T |
|
| Q |
238 |
gtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcac |
337 |
Q |
| |
|
||||| || ||||| ||||| | | |||||||||| | || ||||||||||||||| |||||||| | ||||||||||||||||| || | | ||| |
|
|
| T |
17268062 |
gtggccttaacttcgaagaccttatccttaattgtaacgagagacacatcaaaagtcccaccaccaaggtcaaagacaaaaatattccgttcttcaacac |
17268161 |
T |
|
| Q |
338 |
aatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgatta--ttcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
| | | |||||||| |||||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||| ||||||| |
|
|
| T |
17268162 |
agttagttctcttgccaaggccatatgcaatagctgcagcagttggttcattgattaccttc-aat-acattaaggccagcaatgacaccagc |
17268252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 86 - 407
Target Start/End: Original strand, 8545604 - 8545924
Alignment:
| Q |
86 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaata |
185 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |||| || ||| |||| ||| || ||| | || |||||| | |||||||||| ||||| || |
|
|
| T |
8545604 |
tcctttttgccttctcacaggcagttctcaacctcctcaaggcttctgggttccgactaatatcctcattgttcttcctcttgaactccttcacaaagta |
8545703 |
T |
|
| Q |
186 |
attcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacaca |
285 |
Q |
| |
|
|||||||||||||||||| ||||| || || || |||| ||||| || || ||||| || || |||||||| | | |||||||| || ||||||||| |
|
|
| T |
8545704 |
attcaccattctgttatcaaagtcttcaccgcctaggtaagtgtctccagcagtggccttgacatcaaagaccttatttttaattgtaagaatagacaca |
8545803 |
T |
|
| Q |
286 |
tcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggtt |
385 |
Q |
| |
|
|||||||| ||||| || | ||||||| ||||||||||| ||| | | |||| | |||||| | |||||||||||||| ||| || ||||| |||| |
|
|
| T |
8545804 |
tcaaaagttccaccgccaaggtcaaagataaaaatatttctcttatcaac-caattagctctcttttgaaggccatatgcaagagccgccgcagtcggtt |
8545902 |
T |
|
| Q |
386 |
cattgattattcgaatgacatt |
407 |
Q |
| |
|
|||||||||| || |||||||| |
|
|
| T |
8545903 |
cattgattatccgcatgacatt |
8545924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 38 - 419
Target Start/End: Original strand, 8646800 - 8647181
Alignment:
| Q |
38 |
taaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggatt |
137 |
Q |
| |
|
||||||||| ||| | |||| ||||||| | ||| |||||| ||| |||||||||| ||||| || || ||||||||||||||||||| | ||| || |
|
|
| T |
8646800 |
taaataaagaatctaattcaatggtggtgcaagaagcaaaagatagtgtcctttttgctctctcgcatgccgttctcaacctccttaaggctcttgagtt |
8646899 |
T |
|
| Q |
138 |
cccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcg |
237 |
Q |
| |
|
||| | |||||||| || |||||||| || || || | |||| | | ||||||||| |||| ||||||||||| || ||||||||||| || ||| |
|
|
| T |
8646900 |
tccagtaatgtccaccttgttcttcttgttaaattcttgtgcaaagtggtccaccattctactatcaaagtcctctcctccgaggtgagtgtttccagcg |
8646999 |
T |
|
| Q |
238 |
gtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcac |
337 |
Q |
| |
|
|||||||| || | |||||| | | |||||||||| |||| ||||||||||||||| |||||||| | || |||| || |||||||| | | ||| |
|
|
| T |
8647000 |
gtggctttaacatgaaagaccttatccttaattgtaaggagagacacatcaaaagttccaccaccaaggtcgaagatgaatatatttcgttcttcagcac |
8647099 |
T |
|
| Q |
338 |
aatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaat |
419 |
Q |
| |
|
||| |||||||||||||||||||||| | ||| ||||| || |||||||||||||| || |||| ||||||||||||||| |
|
|
| T |
8647100 |
aatttgttctcttgtcaaggccatatgcgagagcagcagctgttggttcattgattatccggatgatattaaggccagcaat |
8647181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 172 - 428
Target Start/End: Complemental strand, 8636454 - 8636198
Alignment:
| Q |
172 |
tcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattg |
271 |
Q |
| |
|
||||| |||||||| | ||||||||||||||| ||||||||||| |||||||| |||| || || |||||||| ||||||||||| ||||| |||||| |
|
|
| T |
8636454 |
tcctctacaaaatattccaccattctgttatcaaagtcctctcctccaaggtgtgtgtctccggcagtggctttaacttcaaagacttcacctttaattt |
8636355 |
T |
|
| Q |
272 |
tgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagc |
371 |
Q |
| |
|
|||| |||||||| || || ||||||||||| | |||||| || ||||| |||| | |||| | || |||||| | ||| ||||| |||| ||| |
|
|
| T |
8636354 |
tgagtatagacacgtcgaatgtaccaccaccaagatcaaatacgaaaatgtttctctctttaacacagttacctctcttttgaagtccatacgcaaaagc |
8636255 |
T |
|
| Q |
372 |
tgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
||||||||| |||||||||||||| ||||| ||||||||||| ||||| |||||||| |
|
|
| T |
8636254 |
tgcagcagttggttcattgattatccgaattacattaaggccggcaatggcaccagc |
8636198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 86 - 425
Target Start/End: Original strand, 8576297 - 8576636
Alignment:
| Q |
86 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaata |
185 |
Q |
| |
|
||||||||||| | ||||| |||||||||||||||||||||| ||||| |||| |||| || ||| | || | ||| || ||||||||| |||||| | |
|
|
| T |
8576297 |
tcctttttgccttttcacaagcagttctcaacctccttaaggcttttgaattctcactaatatcctctttgtacttgttcctgaactccttaacaaagtg |
8576396 |
T |
|
| Q |
186 |
attcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacaca |
285 |
Q |
| |
|
|| ||||||| ||||||| ||||| | || || |||||||||| || || ||||| || ||||| ||||||| ||||| |||||| ||||||||| |
|
|
| T |
8576397 |
atccaccattatgttatcaaagtcttggcctcctaggtgagtgtctccggcagtggccttgacttcgaagacattgttcttaactgtgagaatagacaca |
8576496 |
T |
|
| Q |
286 |
tcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggtt |
385 |
Q |
| |
|
|||||||| ||||| || | ||||||| ||||||||||| ||| | |||||| | |||||| | ||||||||| |||| |||||| ||||| |||| |
|
|
| T |
8576497 |
tcaaaagttccaccgccaaggtcaaagataaaaatatttcttttatcaacacaattagctctcttttgaaggccatacgcaagagctgccgcagtcggtt |
8576596 |
T |
|
| Q |
386 |
cattgattattcgaatgacattaaggccagcaatagcacc |
425 |
Q |
| |
|
|||||||||| | |||||||| || |||||||| ||||| |
|
|
| T |
8576597 |
cattgattatctgcatgacattgagaccagcaattgcacc |
8576636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 86 - 419
Target Start/End: Original strand, 8570282 - 8570615
Alignment:
| Q |
86 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaata |
185 |
Q |
| |
|
||||||||||||||||||| || ||||| |||||||| |||| |||||| |||| ||| || ||| |||| |||||||| ||||||| || ||||| | |
|
|
| T |
8570282 |
tcctttttgccctctcacaagctgttcttaacctcctcaaggcttttgggttcctactaatatcctcgttgttcttcttcttgaacttcttcacaaagtg |
8570381 |
T |
|
| Q |
186 |
attcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacaca |
285 |
Q |
| |
|
| ||| |||||||||||| || || || || || |||||||||| || || ||||| || |||||| || | | |||||| |||||| ||||||||| |
|
|
| T |
8570382 |
agtcaacattctgttatcaaaatcttcacctcccaggtgagtgtctccagcagtggccttgacttcatagttgttatccttaactgtgagaatagacaca |
8570481 |
T |
|
| Q |
286 |
tcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggtt |
385 |
Q |
| |
|
|||||||| ||||| || | ||||||| ||||||||||| ||| | || ||| | |||||| | |||||||||||||| |||||| ||||| |||| |
|
|
| T |
8570482 |
tcaaaagttccaccgccaaggtcaaagataaaaatatttctcttatcaacaaaattagctctcttttgaaggccatatgcaagagctgccgcagtcggtt |
8570581 |
T |
|
| Q |
386 |
cattgattattcgaatgacattaaggccagcaat |
419 |
Q |
| |
|
|||||||||| || || ||||| || |||||||| |
|
|
| T |
8570582 |
cattgattatccgcattacattgagaccagcaat |
8570615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 75 - 428
Target Start/End: Original strand, 6789472 - 6789825
Alignment:
| Q |
75 |
aaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcc |
174 |
Q |
| |
|
||||||||||| |||||| ||||| ||||| |||||||||||||| ||||||| ||| || ||| | || ||||| || |||||| | || |||||| |
|
|
| T |
6789472 |
aaaagagagtacccttttggccctttcacacgcagttctcaaccttcttaaggcccttgagtttccagtaatatccactttgttcttcctcttaaactcc |
6789571 |
T |
|
| Q |
175 |
tcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtga |
274 |
Q |
| |
|
|| |||| || || |||| || |||||| ||||||||||| || ||||||||||| || ||||||| || |||| ||||| | | | || ||||| | |
|
|
| T |
6789572 |
tctgcaaagtagtttaccaatcggttatcaaagtcctctcctccgaggtgagtgtttccaccggtggccttaacttggaagaccttatctttgattgtta |
6789671 |
T |
|
| Q |
275 |
ggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgc |
374 |
Q |
| |
|
|||||||||||| ||||| |||||||| | || ||||| ||||||||| | || | ||| | ||||||| |||||||||||||||| ||| || |
|
|
| T |
6789672 |
agatagacacatcgaaagtgccaccaccaaggtcgaagacgaaaatatttttttctccaccgtaattagttctcttatcaaggccatatgcaagagcagc |
6789771 |
T |
|
| Q |
375 |
agcagtaggttcattgattattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
||| || ||||||||||||||||| || |||||||| |||||||| |||||||| |
|
|
| T |
6789772 |
agctgttggttcattgattattcgtataacattaagaccagcaatggcaccagc |
6789825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 86 - 428
Target Start/End: Complemental strand, 8383073 - 8382731
Alignment:
| Q |
86 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaata |
185 |
Q |
| |
|
|||||||||||||||| || || ||||| ||||| || | | ||||| |||||||| |||||| |||| |||| | |||||||| |||||||| || |
|
|
| T |
8383073 |
tcctttttgccctctcgcaagccgttcttaaccttctaagagcctttgggttcccactaatgtccttattatgcttcctcttgaactcgtcaacaaagta |
8382974 |
T |
|
| Q |
186 |
attcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacaca |
285 |
Q |
| |
|
||||| ||||||||||| ||||| || || || || ||||||| || || ||||| || || ||||||||| | |||||||||||||| ||||||| |
|
|
| T |
8382973 |
cttcacgattctgttatctaagtcttcacctcctagatgagtgtctccggcagtggccttcacaacaaagacattattcttaattgtgaggagagacaca |
8382874 |
T |
|
| Q |
286 |
tcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggtt |
385 |
Q |
| |
|
|||||||| |||||||| | |||||||| |||||||||| | | ||||| | |||||| | |||||||||||||| ||| || ||||| || | |
|
|
| T |
8382873 |
tcaaaagttccaccaccaagatcaaagatgaaaatatttctctcttcaagacaattagctctcttctgaaggccatatgcaagagcagcggcagttggct |
8382774 |
T |
|
| Q |
386 |
cattgattattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
|||||||||| || || ||||| ||||||||||| |||||||| |
|
|
| T |
8382773 |
cattgattatccgcattacattgaggccagcaatcgcaccagc |
8382731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 91 - 420
Target Start/End: Complemental strand, 29577864 - 29577532
Alignment:
| Q |
91 |
tttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattca |
190 |
Q |
| |
|
|||||||||||||| |||||||||| | ||||||| | |||||| ||| ||| |||||||| || |||||| | || ||||| | ||||| | ||| |
|
|
| T |
29577864 |
tttgccctctcacaagcagttctcagcttccttaaagcttttgggttcaaactaatgtccacattgttcttcctcttcaactcattcacaaagtggctca |
29577765 |
T |
|
| Q |
191 |
ccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaa |
290 |
Q |
| |
|
||||| | ||||||||||||||||| || |||||||| | ||| || ||||| ||||||||||| |||| |||||| |||||| | |||||||||||| |
|
|
| T |
29577764 |
ccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaaaactatcatccttaagtgtgagaagagacacatcaaa |
29577665 |
T |
|
| Q |
291 |
agtaccaccacccaaatcaaagacaaaaatatttcggtt---accctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttca |
387 |
Q |
| |
|
|| |||||||| | |||||||| || | |||||| || | | || ||| || |||||| | || |||||||||| || |||||||| |||||| |
|
|
| T |
29577664 |
ggtgccaccaccaagatcaaagatgaatacatttcgctttccaacaacaaaattacctctcttttgaattccatatgcaagtgcagcagcagttggttca |
29577565 |
T |
|
| Q |
388 |
ttgattattcgaatgacattaaggccagcaata |
420 |
Q |
| |
|
|||||||| || || ||||| |||||||||||| |
|
|
| T |
29577564 |
ttgattatccgcattacattgaggccagcaata |
29577532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 86 - 416
Target Start/End: Complemental strand, 29582038 - 29581708
Alignment:
| Q |
86 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaata |
185 |
Q |
| |
|
|||| |||||||||||||| || ||||||| | ||||||| | |||||| |||||||| ||||||| || |||||| | || ||||| | |||| || |
|
|
| T |
29582038 |
tcctctttgccctctcacaagctgttctcagcttccttaaagcttttgggttcccactaatgtccaaattgttcttcctcttcaactcattcgcaaagta |
29581939 |
T |
|
| Q |
186 |
attcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacaca |
285 |
Q |
| |
|
||||||||||| |||||| ||||||||||| || |||||||| | || || ||||| || |||||||| |||| |||| | |||||| | ||||||| |
|
|
| T |
29581938 |
attcaccattcggttatcaaagtcctctcctcctaggtgagtatcgccagcagtggccttcacttcaaacttatcatccttgagtgtgagaagagacaca |
29581839 |
T |
|
| Q |
286 |
tcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggtt |
385 |
Q |
| |
|
|||||||| |||||||| | |||||||| || |||||||| || || || ||| || || ||| | || |||||||||| || |||||||| |||| |
|
|
| T |
29581838 |
tcaaaagtgccaccaccaagatcaaagatgaatatatttcgttttccaacaaaattacctcccttttgaataccatatgcaagtgcagcagcagttggtt |
29581739 |
T |
|
| Q |
386 |
cattgattattcgaatgacattaaggccagc |
416 |
Q |
| |
|
| |||||||| | || ||||| |||||||| |
|
|
| T |
29581738 |
cgttgattatcctcattacattgaggccagc |
29581708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 86 - 395
Target Start/End: Original strand, 8581671 - 8581980
Alignment:
| Q |
86 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaata |
185 |
Q |
| |
|
||||||| || |||||||| ||||| |||||||| || | || ||||||||| ||| | || ||| | |||| || | ||||||||| ||||| | |
|
|
| T |
8581671 |
tccttttcgctctctcacaagcagtcctcaaccttctaatggcttttggatttccaataatctcctctttatgttttctcttgaactccgacacaaagtg |
8581770 |
T |
|
| Q |
186 |
attcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacaca |
285 |
Q |
| |
|
|||||||||||||||||| || || || || || |||||||||| || || ||||| || |||||| || | | | ||||| |||||| ||||||||| |
|
|
| T |
8581771 |
attcaccattctgttatcaaaatcttcccctcccaggtgagtgtctccagcagtggccttgacttcatagtcgttattcttaactgtgagaatagacaca |
8581870 |
T |
|
| Q |
286 |
tcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggtt |
385 |
Q |
| |
|
|||||||| ||||| || | ||||||| ||||||||||| ||| | |||||| | |||||| | |||||||||||||| |||||| ||||| |||| |
|
|
| T |
8581871 |
tcaaaagttccacctccaaggtcaaagataaaaatatttctcttatcaacacaattagctctcttttgaaggccatatgcaagagctgccgcagtcggtt |
8581970 |
T |
|
| Q |
386 |
cattgattat |
395 |
Q |
| |
|
|||||||||| |
|
|
| T |
8581971 |
cattgattat |
8581980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 166 - 428
Target Start/End: Original strand, 8602025 - 8602287
Alignment:
| Q |
166 |
ttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcaccct |
265 |
Q |
| |
|
||||||||| |||||| | |||||||||| |||||| ||||||||||| |||||||| |||| || | ||||| || |||||||||| || | || |
|
|
| T |
8602025 |
ttgaactccataacaaagtggttcaccattcggttatcaaagtcctctcctccaaggtgtgtgtctccggaagtggccttgacttcaaagagattattct |
8602124 |
T |
|
| Q |
266 |
taattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgc |
365 |
Q |
| |
|
|||||||||| | ||| ||||||||||| |||||||| | |||||| | |||||||||| | | |||||| | |||||| | |||||||||||| |
|
|
| T |
8602125 |
taattgtgagaagagaaacatcaaaagttccaccaccaagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgc |
8602224 |
T |
|
| Q |
366 |
aatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
|| ||| || ||||| || ||||||||||| || || ||||| || |||||||| |||||||| |
|
|
| T |
8602225 |
aagagcagctgcagttggctcattgattatccgcattacattgagaccagcaatggcaccagc |
8602287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 428
Target Start/End: Original strand, 8609961 - 8610230
Alignment:
| Q |
159 |
cttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagaca |
258 |
Q |
| |
|
|||| |||||||||||| ||||| | ||| |||||||||| ||| ||||||||||| ||||||||||| | || || || || || || || || || |
|
|
| T |
8609961 |
cttccttttgaactccttcacaaagtgattaaccattctgtgatcaaagtcctctcctccaaggtgagtatctccagcagtagccttgacatcgaaagca |
8610060 |
T |
|
| Q |
259 |
tcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggc |
358 |
Q |
| |
|
| ||||||||||| | ||||||||| ||||| |||||||| | |||||||| ||||||||||| || || |||||| | |||||| | ||| | |
|
|
| T |
8610061 |
ttgtttttaattgtgagaacagacacatcgaaagtcccaccaccaagatcaaagataaaaatatttctattttccacacaattagctctcttctgaagac |
8610160 |
T |
|
| Q |
359 |
catatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
||||||||| ||| ||||| || ||||||||||| || || || ||||||||||||| ||| ||||||| |
|
|
| T |
8610161 |
catatgcaagagccgcagccgttggttcattgataatccggattacattaaggccagaaatgacaccagc |
8610230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 187 - 419
Target Start/End: Original strand, 8559405 - 8559637
Alignment:
| Q |
187 |
ttcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacat |
286 |
Q |
| |
|
||||||||||||||||| ||||||||||| || ||||| |||| || | ||||| || |||||||||| || | |||||||||||| | ||| |||| |
|
|
| T |
8559405 |
ttcaccattctgttatcaaagtcctctcctccgaggtgtgtgtctccggaagtggccttgacttcaaagagattattcttaattgtgagaagagaaacat |
8559504 |
T |
|
| Q |
287 |
caaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttc |
386 |
Q |
| |
|
||||||| |||||||| | |||||||| |||||||||| | |||||| | |||||| | ||| |||||||||| ||| || ||||| ||||| |
|
|
| T |
8559505 |
caaaagttccaccaccgagatcaaagatgaaaatatttctctctttaacacaattagatctcttttgaagtccatatgcaagagcagctgcagttggttc |
8559604 |
T |
|
| Q |
387 |
attgattattcgaatgacattaaggccagcaat |
419 |
Q |
| |
|
||||||||| | || |||||||| |||||||| |
|
|
| T |
8559605 |
attgattatctgcattacattaagaccagcaat |
8559637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 428
Target Start/End: Original strand, 8538008 - 8538349
Alignment:
| Q |
87 |
cctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataa |
186 |
Q |
| |
|
||||||||||||||| || |||||||||||| |||| | | ||||| ||| ||||| ||||| || || || ||| | || || || | ||||||| | |
|
|
| T |
8538008 |
cctttttgccctctcgcatgcagttctcaacttcctcagagcttttgaatttccactaatgtcaactttgtttttcctcttcaattcattcacaaaatga |
8538107 |
T |
|
| Q |
187 |
ttcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacat |
286 |
Q |
| |
|
||||||| | ||||| ||||||||||| ||||||||||| | || || ||||| || ||| |||| ||| | ||| | ||| |||| ||| |||| |
|
|
| T |
8538108 |
ttcaccaaccgattatcaaagtcctctcctccaaggtgagtatctccggcagtggccttgactgtaaaggcattattcttcaatgtaaggagagatacat |
8538207 |
T |
|
| Q |
287 |
caaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttc |
386 |
Q |
| |
|
||||||| |||||||| | |||||||| |||| |||| | | |||||| | |||||| | |||||| ||||||| ||| ||||| |||||||| |
|
|
| T |
8538208 |
caaaagttccaccaccaagatcaaagatgaaaacttttctctcttcaacacaattagctctcttttgaaggccgtatgcaagagcagcagctgtaggttc |
8538307 |
T |
|
| Q |
387 |
attgattattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
||||||||| || || ||||| ||||||||||| ||||||| |
|
|
| T |
8538308 |
attgattatccgcattacattgaggccagcaatgacaccagc |
8538349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 86 - 302
Target Start/End: Complemental strand, 7877930 - 7877714
Alignment:
| Q |
86 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaata |
185 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||| | || | || || |||| |||||||| ||||||||| | || |||||| || |||| |
|
|
| T |
7877930 |
tccttttagccctctcacatgcagttctcaacctcctaagggccctcgggtttccaccaatgtccactttattcttcctcttaaactccatcactaaatg |
7877831 |
T |
|
| Q |
186 |
attcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacaca |
285 |
Q |
| |
|
|||| |||||||||||| ||||||||||| || |||||||| | || || || ||| |||| |||||| |||| | || | |||||| | ||||||| |
|
|
| T |
7877830 |
gttcaacattctgttatcaaagtcctctccacctaggtgagtatctccggcagtagctattacatcaaagctatcatcttttagtgtgagaagagacaca |
7877731 |
T |
|
| Q |
286 |
tcaaaagtaccaccacc |
302 |
Q |
| |
|
|| ||||| |||||||| |
|
|
| T |
7877730 |
tcgaaagtgccaccacc |
7877714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 8590713 - 8590836
Alignment:
| Q |
190 |
accattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaa |
289 |
Q |
| |
|
|||||||||||||| ||||||||||| || ||||| || | || | ||||||||||| |||||| |||||| || | |||||| | ||||||||||| |
|
|
| T |
8590713 |
accattctgttatcaaagtcctctcctcctaggtgggtatctccggaagtggcttttacatcaaagctatcacctttgagtgtgagaagagacacatcaa |
8590812 |
T |
|
| Q |
290 |
aagtaccaccacccaaatcaaaga |
313 |
Q |
| |
|
|||| |||||||| | |||||||| |
|
|
| T |
8590813 |
aagtgccaccaccaagatcaaaga |
8590836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 313
Target Start/End: Original strand, 8102832 - 8102865
Alignment:
| Q |
280 |
gacacatcaaaagtaccaccacccaaatcaaaga |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
8102832 |
gacacatcaaaagtaccaccacccaaatcaaaga |
8102865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 39985878 - 39985951
Alignment:
| Q |
347 |
tcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaata |
420 |
Q |
| |
|
|||||||||| ||||| ||||| || |||||||| || |||||||| ||||| ||||||||||| || |||||| |
|
|
| T |
39985878 |
tcttgtcaagaccataagcaatggcagcagcagtgggctcattgataattcgcatgacattaagaccggcaata |
39985951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 428
Target Start/End: Complemental strand, 7877672 - 7877588
Alignment:
| Q |
344 |
ttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
||||||| | |||||||||||||| || |||||||| |||||||| ||||| || || ||||| ||||| |||| |||||||| |
|
|
| T |
7877672 |
ttctcttttgaaggccatatgcaagggcagcagcagttggttcattaattatccgcataacattgaggccggcaactgcaccagc |
7877588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 289; Significance: 1e-162; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 16 - 428
Target Start/End: Complemental strand, 9336158 - 9335746
Alignment:
| Q |
16 |
gatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctca |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
9336158 |
gatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtaacaaaagcaaaagacagtatcctttttgccctctcacaggcagttctca |
9336059 |
T |
|
| Q |
116 |
acctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcc |
215 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||| || |||||||| || |||||||||||||| |||||||| || |
|
|
| T |
9336058 |
acctccttaaggattttgggttctgcttgatgtccactttattcttcttttttaactcttccacaaaatagttaaccattctgttatcaaagtcctcgcc |
9335959 |
T |
|
| Q |
216 |
cccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagaca |
315 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
9335958 |
tccaaggtgcgtgtttcctgcggtggcttttacttcaaatagatcacccttaattgtgaggatagacacatcaaaagtaccgccacccagatcaaagaca |
9335859 |
T |
|
| Q |
316 |
aaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccag |
415 |
Q |
| |
|
||||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9335858 |
aaaatatttcggttaccatcacagtcatttctcttatcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccag |
9335759 |
T |
|
| Q |
416 |
caatagcaccagc |
428 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
9335758 |
caatagtaccagc |
9335746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 79 - 428
Target Start/End: Original strand, 30775216 - 30775565
Alignment:
| Q |
79 |
gagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaa |
178 |
Q |
| |
|
|||||| ||||||||||| | ||||| |||||||||||| || || | | |||||||||| | ||||||||||| |||||| | || || ||||| | |
|
|
| T |
30775216 |
gagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggattcccggtaatgtccacgttgttcttcgtcttaaattcctcta |
30775315 |
T |
|
| Q |
179 |
caaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggat |
278 |
Q |
| |
|
|||| ||||||| |||||||||||| |||||||||||||| | ||||||||| || || || ||||| |||||||| |||||| | |||| ||||| | |
|
|
| T |
30775316 |
caaagtaattcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagcagttgctttaacttcaaacacatcatctctaatggtgagaag |
30775415 |
T |
|
| Q |
279 |
agacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagca |
378 |
Q |
| |
|
||||||||||||||| |||||||| | |||||||||||||||||| | | | | ||||| || |||||| ||||| ||||||||||||||||| ||| |
|
|
| T |
30775416 |
agacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctgctgca |
30775515 |
T |
|
| Q |
379 |
gtaggttcattgattattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
|| || ||||| ||||||| || |||||||| |||||||| |||||||| |
|
|
| T |
30775516 |
gtgggctcattaattattctcataacattaagaccagcaatggcaccagc |
30775565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 124 - 428
Target Start/End: Original strand, 35132457 - 35132761
Alignment:
| Q |
124 |
aaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggt |
223 |
Q |
| |
|
|||| ||||| ||||||||| ||||| || || ||||| | |||||||| | ||||| || ||||||||||||||||| ||||||||||| || || | |
|
|
| T |
35132457 |
aaggcttttgaattcccactaatgtctactttgttctttctcttgaactcttgtacaaagtagttcaccattctgttatcaaagtcctctccaccgagat |
35132556 |
T |
|
| Q |
224 |
gagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatt |
323 |
Q |
| |
|
||||||| || || ||||| || |||| ||||||| | ||||||| || || || || ||||||||||| |||||||| | ||| |||||||||||||| |
|
|
| T |
35132557 |
gagtgtttccggcagtggccttaacttggaagacattatccttaatagtaagtattgaaacatcaaaagtgccaccaccaagatcgaagacaaaaatatt |
35132656 |
T |
|
| Q |
324 |
tcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagca |
423 |
Q |
| |
|
| | | || |||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||| || || ||||| | |||||||||||| |
|
|
| T |
35132657 |
ttgttctccagcacaatcagatctcttgtcaaggccatatgcaaccgctgcggcagtaggttcattcattactctcataacattgggaccagcaatagca |
35132756 |
T |
|
| Q |
424 |
ccagc |
428 |
Q |
| |
|
||||| |
|
|
| T |
35132757 |
ccagc |
35132761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 16 - 428
Target Start/End: Complemental strand, 16657784 - 16657372
Alignment:
| Q |
16 |
gatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctca |
115 |
Q |
| |
|
|||||||||||||| |||||| |||||||| ||| |||||||| ||||||||||||| |||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
16657784 |
gatgaagaaaagtcaattccctgaaataaagaatctacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctca |
16657685 |
T |
|
| Q |
116 |
acctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcc |
215 |
Q |
| |
|
||||||| |||| | ||| |||||||| |||||||| ||||||||||||| |||||||| ||||| || |||||| |||||||||| ||||||||||| |
|
|
| T |
16657684 |
acctcctcaaggctcttgagttcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcc |
16657585 |
T |
|
| Q |
216 |
cccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagaca |
315 |
Q |
| |
|
||||||||||||||| || || ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| || | ||||||||| |
|
|
| T |
16657584 |
cccaaggtgagtgtttccggcagtggcttttacctcaaaaacatcacccttaattgtaaggatagacacatcaaaagtaccaccgccaaggtcaaagaca |
16657485 |
T |
|
| Q |
316 |
aaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccag |
415 |
Q |
| |
|
|||||||| || ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
16657484 |
aaaatattccgtttaccatcacaatcacttctcttgtcaagaccatatgcaatagctgcagcagtaggttcattgataattcgaatgacattaaggccag |
16657385 |
T |
|
| Q |
416 |
caatagcaccagc |
428 |
Q |
| |
|
| || |||||||| |
|
|
| T |
16657384 |
cgatggcaccagc |
16657372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 76 - 428
Target Start/End: Complemental strand, 16662199 - 16661847
Alignment:
| Q |
76 |
aaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcct |
175 |
Q |
| |
|
||||||||| ||||||| ||| | ||||| | ||||||||||||||| |||| | ||||||||| | |||| ||||| || |||||| | || || || | |
|
|
| T |
16662199 |
aaagagagtgtccttttcgccttttcacaagaagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctt |
16662100 |
T |
|
| Q |
176 |
caacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgag |
275 |
Q |
| |
|
||||| || |||| |||||||||||| |||||||||||||| ||||||||||| || | |||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
16662099 |
tcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgag |
16662000 |
T |
|
| Q |
276 |
gatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgca |
375 |
Q |
| |
|
|| ||||||||||||||| |||||||| | |||||||||||||||||||| | ||| ||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
16661999 |
gagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatttctttcaccatcacaattacttcttttgtcaaggccatatgcaatagctgct |
16661900 |
T |
|
| Q |
376 |
gcagtaggttcattgattattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
||||| |||||||||||||| | | || |||||||||||||| |||||||| |
|
|
| T |
16661899 |
gcagtgggttcattgattatcctcacaacgttaaggccagcaatggcaccagc |
16661847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 39 - 428
Target Start/End: Original strand, 14703332 - 14703721
Alignment:
| Q |
39 |
aaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattc |
138 |
Q |
| |
|
|||||||||||| ||||||| |||| ||||| ||||| ||| | |||||||||||||| || || |||||||| |||||||||| ||||||||| |
|
|
| T |
14703332 |
aaataaagcatctacctcaatagtggcgacaacttggaaagaaagtgttctttttgccctctcgcaagcggttctcaagctccttaaggcttttggattt |
14703431 |
T |
|
| Q |
139 |
ccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcgg |
238 |
Q |
| |
|
||||| ||||||| | || || | |||||||| | |||||| || |||||||||||||||||||||||||||||||| ||||||||||| || || | |
|
|
| T |
14703432 |
ccactaatgtccaatctgttttttctcttgaactcttgaacaaagtagttcaccattctgttatcgaagtcctctcccccgaggtgagtgtttccagcag |
14703531 |
T |
|
| Q |
239 |
tggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcaca |
338 |
Q |
| |
|
| || || | || ||||| ||||||||||| |||| |||||| ||||||||||||||||| | |||||||||||| ||||| || | || || | |
|
|
| T |
14703532 |
tagccttaatttggaagacggtgcccttaattgttaggagagacacgtcaaaagtaccaccaccaagatcaaagacaaatatattacgttctccaccata |
14703631 |
T |
|
| Q |
339 |
atcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| ||||||||||| |||| | || ||||| ||||| |||||| ||||||| |
|
|
| T |
14703632 |
atcagttctcttgtcaaggccatatgcaatagctgcagctgtaggttcattcattaccctcataacattgaggccggcaataacaccagc |
14703721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 88 - 389
Target Start/End: Original strand, 7542199 - 7542500
Alignment:
| Q |
88 |
ctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataat |
187 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||| || ||||| | |||||||| | ||||| || | |
|
|
| T |
7542199 |
ctttttgccctctcacaagcagttctcaacctcctcaaggcttttggattcccactaatgtccactttgttctttctcttgaactcttgtacaaagtagt |
7542298 |
T |
|
| Q |
188 |
tcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatc |
287 |
Q |
| |
|
|| ||||||| ||||| ||||| ||||| |||||||||||||| || || ||||| || |||| ||| | |||||||| || || | ||||||||| |
|
|
| T |
7542299 |
tcgccattctattatcaaagtcttctccaccaaggtgagtgttgccagcagtggccttaacttggaagttgttgcccttaatcgttagtaaagacacatc |
7542398 |
T |
|
| Q |
288 |
aaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttca |
387 |
Q |
| |
|
|||||| ||||| || | |||||| |||||||||||||| | || ||| ||||| |||||||||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
7542399 |
aaaagtgccaccgccaagatcaaaaacaaaaatatttcgctctccatcataatcagttctcttgtcaaggccatatgcaacagctgcggcagtaggttca |
7542498 |
T |
|
| Q |
388 |
tt |
389 |
Q |
| |
|
|| |
|
|
| T |
7542499 |
tt |
7542500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 88 - 367
Target Start/End: Original strand, 12234662 - 12234941
Alignment:
| Q |
88 |
ctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataat |
187 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| |||| ||||||||| ||||| |||||||| || ||||| | |||||||| | | ||| || | |
|
|
| T |
12234662 |
ctttttgccctctcacaagcagttcttaacctcctcaaggcttttggatttccactcatgtccacttttttctttctattgaactcttgagcaaggtagt |
12234761 |
T |
|
| Q |
188 |
tcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatc |
287 |
Q |
| |
|
| |||||||||||||| |||||||||||||| ||||||||||| || || |||||||| |||| ||||||| ||| || ||||| |||| ||||||||| |
|
|
| T |
12234762 |
ttaccattctgttatcaaagtcctctcccccgaggtgagtgtttccggctgtggctttaacttggaagacattacctttgattgttaggagagacacatc |
12234861 |
T |
|
| Q |
288 |
aaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaa |
367 |
Q |
| |
|
|||||| ||||| || | |||||| |||||||||||||| | || |||||||| ||||||||||||| |||||||||| |
|
|
| T |
12234862 |
aaaagtgccaccgccgagatcaaaaacaaaaatatttcgttctccaacacaatcagttctcttgtcaagaccatatgcaa |
12234941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 88 - 389
Target Start/End: Complemental strand, 12258776 - 12258475
Alignment:
| Q |
88 |
ctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataat |
187 |
Q |
| |
|
|||||||| |||||||| || ||| |||| ||||| || | | ||||||| ||||| || || || || ||||| | |||||||| || ||||| ||| |
|
|
| T |
12258776 |
ctttttgcactctcacaagctgttttcaatctcctcaaagctcttggatttccacttatatctactttgttctttctcttgaactcttctacaaagtaac |
12258677 |
T |
|
| Q |
188 |
tcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatc |
287 |
Q |
| |
|
|||||||||| ||||| ||||||||||| |||||||| ||||| || || || || || |||| |||||||| | ||||||| || || | ||||||||| |
|
|
| T |
12258676 |
tcaccattctattatcaaagtcctctcctccaaggtgcgtgtttccagctgtagccttaacttgaaagacattatccttaatggttagtagagacacatc |
12258577 |
T |
|
| Q |
288 |
aaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttca |
387 |
Q |
| |
|
|||||| |||||||| | |||||||||||||||||| || || | |||||| | |||| ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
12258576 |
aaaagtgccaccaccaagatcaaagacaaaaatattccgtttttcgacacaattaattcttttgtcaaggccatatgcaaaagctgcagcagtaggttca |
12258477 |
T |
|
| Q |
388 |
tt |
389 |
Q |
| |
|
|| |
|
|
| T |
12258476 |
tt |
12258475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 394
Target Start/End: Complemental strand, 12245607 - 12245295
Alignment:
| Q |
82 |
agtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaa |
181 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||| ||||| |||| ||||| | | |||| || |||| || ||||| | |||||||||| ||| |
|
|
| T |
12245607 |
agtattctttttgccctctcacaagcagttctcaatctcctcaaggcttttgaacttgcactaatatccaatttgttctttctcttgaactcctgtgcaa |
12245508 |
T |
|
| Q |
182 |
aataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggataga |
281 |
Q |
| |
|
| || || |||||||| ||||| || |||||||| |||||||||||||| || || ||||| || |||| |||| | | ||||||| || |||||||| |
|
|
| T |
12245507 |
agtagtttaccattctattatcaaaatcctctcctccaaggtgagtgtttccagcagtggccttaacttggaagatgttatccttaatagttaggataga |
12245408 |
T |
|
| Q |
282 |
cacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagta |
381 |
Q |
| |
|
|| |||||||| |||||||| | |||||| |||||||| |||| | || |||||||| |||||| |||||||||||||||| |||||||||||| |
|
|
| T |
12245407 |
aacgtcaaaagtgccaccaccaagatcaaacacaaaaatgtttctttctccaacacaatcagctctcttttcaaggccatatgcaacagctgcagcagtg |
12245308 |
T |
|
| Q |
382 |
ggttcattgatta |
394 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
12245307 |
ggttcattcatta |
12245295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 187 - 413
Target Start/End: Original strand, 43625484 - 43625710
Alignment:
| Q |
187 |
ttcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacat |
286 |
Q |
| |
|
||||||||||| | ||| ||||||||||| |||||||||||||| || || |||||||| || ||||| | |||||||||| || |||||||||| |
|
|
| T |
43625484 |
ttcaccattctatcatcaaagtcctctcctccaaggtgagtgtttccagcagtggctttaacacggaagaccttgtccttaattgtaagtatagacacat |
43625583 |
T |
|
| Q |
287 |
caaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttc |
386 |
Q |
| |
|
|||||||||||||||| | ||||||| ||||||||||| | || |||||| | ||||||||| |||||| ||||| | ||| ||||| || ||||| |
|
|
| T |
43625584 |
caaaagtaccaccaccaaggtcaaagatgaaaatatttcgttctccaacacaattaattctcttgttaaggccgtatgctagagcagcagctgttggttc |
43625683 |
T |
|
| Q |
387 |
attgattattcgaatgacattaaggcc |
413 |
Q |
| |
|
|||||||| ||| | ||||||||||| |
|
|
| T |
43625684 |
attgattactcgtaaaacattaaggcc |
43625710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 394
Target Start/End: Original strand, 11999478 - 11999673
Alignment:
| Q |
199 |
ttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccac |
298 |
Q |
| |
|
||||| || |||||||| || | ||||||||| || || ||||| || |||| ||||||| |||||||||| || ||||||| ||||||||| |||| |
|
|
| T |
11999478 |
ttatcaaaatcctctcctccgaagtgagtgtttccagctgtggccttaacttggaagacattgtccttaattgttagtatagacaaatcaaaagtgccac |
11999577 |
T |
|
| Q |
299 |
cacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgatta |
394 |
Q |
| |
|
| || | ||||||||| ||||| |||| | || |||||||| ||||||||||||||||||||||| || ||||||||| |||||||| |||| |
|
|
| T |
11999578 |
cgccaagatcaaagactaaaatgtttctttctccaacacaatcagctctcttgtcaaggccatatgcaacagttgcagcagtgggttcattcatta |
11999673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 11999374 - 11999425
Alignment:
| Q |
82 |
agtatcctttttgccctctcacaggcagttctcaacctccttaaggattttg |
133 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||| |||| ||||| |
|
|
| T |
11999374 |
agtattctttttgccctctcacaagcagttctcaacctcctcaaggcttttg |
11999425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 428
Target Start/End: Complemental strand, 17716618 - 17716548
Alignment:
| Q |
358 |
ccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
||||| ||||| ||||||||||| || ||||| || |||| |||| |||||| ||||||||||||||||| |
|
|
| T |
17716618 |
ccataagcaatggctgcagcagtgggctcattaataattctcatgaaattaagaccagcaatagcaccagc |
17716548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 17666872 - 17666764
Alignment:
| Q |
94 |
gccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcacca |
193 |
Q |
| |
|
||||||||||| ||||| | ||||||| | | | | |||| || |||||||||||| ||| ||||| |||||||||| | |||||| | |||||||| |
|
|
| T |
17666872 |
gccctctcacaagcagtccccaacctcataagagctcttgggttgccactgatgtccttgttgttctttcttttgaactcttgaacaaagtgattcacca |
17666773 |
T |
|
| Q |
194 |
ttctgttat |
202 |
Q |
| |
|
||||||||| |
|
|
| T |
17666772 |
ttctgttat |
17666764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 15 - 428
Target Start/End: Complemental strand, 4678825 - 4678413
Alignment:
| Q |
15 |
agatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctc |
114 |
Q |
| |
|
||||||||||||||| |||||| |||||||| ||| || ||||| ||||||||||| | ||||||||| |||| ||||||||||| |||||||||||| |
|
|
| T |
4678825 |
agatgaagaaaagtctattccctgaaataaagaatctac-tcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctc |
4678727 |
T |
|
| Q |
115 |
aacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctc |
214 |
Q |
| |
|
||||||||||||| ||||| ||| ||| |||||||| ||||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||||| |
|
|
| T |
4678726 |
aacctccttaagggttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctc |
4678627 |
T |
|
| Q |
215 |
ccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagac |
314 |
Q |
| |
|
| || ||||||||||| || || ||||||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
4678626 |
cacctaggtgagtgtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaagac |
4678527 |
T |
|
| Q |
315 |
aaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggcca |
414 |
Q |
| |
|
||| |||||||| |||| |||| |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||||| ||| |
|
|
| T |
4678526 |
aaatatatttcgtttacaatcactttcacttctcttgtcaaaaccatatgcaatagctgcaacagtaggttcgttgattatttgaatgacattaagtcca |
4678427 |
T |
|
| Q |
415 |
gcaatagcaccagc |
428 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
4678426 |
gcaatggcaccagc |
4678413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 38 - 425
Target Start/End: Original strand, 15594957 - 15595351
Alignment:
| Q |
38 |
taaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggatt |
137 |
Q |
| |
|
|||||||| ||| ||||||| ||| |||||| || ||||||||||| |||||||||||| || || ||||||||||| ||||| |||| |||| || |
|
|
| T |
15594957 |
taaataaacaatctacctcaatggtagtgacagtagtaaaagagagtaccctttttgccctttcgcacgcagttctcaatctcctcaaggcccttgggtt |
15595056 |
T |
|
| Q |
138 |
cccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcg |
237 |
Q |
| |
|
|||| | || ||||| || |||||| | ||||| |||| |||| || || |||||||||||||| ||||||||||| |||||||||||||| || | |
|
|
| T |
15595057 |
cccagtaatatccactttgttcttcgtcttgaattcctgcgcaaagtagttgaccattctgttatcaaagtcctctcctccaaggtgagtgtttccgcct |
15595156 |
T |
|
| Q |
238 |
gtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcac |
337 |
Q |
| |
|
||||| || |||| ||||| | |||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||| | || ||| |
|
|
| T |
15595157 |
gtggccttaacttggaagaccttgtccttaattgttaggatagacacatcaaaagtgccaccaccaagatcaaagacaaaaatatttctttctccaacac |
15595256 |
T |
|
| Q |
338 |
aatcacttctcttgtcaaggccatatgcaatagctg-------cagcagtaggttcattgattattcgaatgacattaaggccagcaatagcacc |
425 |
Q |
| |
|
| | | | |||||||||||||||||||||||||||| |||| || ||||||||||||| || || ||||||||||||||||| ||||| |
|
|
| T |
15595257 |
agttaatcctcttgtcaaggccatatgcaatagctgcagctgtcagctgtcggttcattgattacccgtataacattaaggccagcaatggcacc |
15595351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 191 - 428
Target Start/End: Complemental strand, 34466885 - 34466648
Alignment:
| Q |
191 |
ccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacatcaaa |
290 |
Q |
| |
|
||||||| ||||| |||||||||| || |||||||||||||| | ||||| || ||||||||||||| | |||||||||| |||| |||||||||||| |
|
|
| T |
34466885 |
ccattctattatcaaagtcctctcgtccgaggtgagtgttaccagaagtggccttaacttcaaagacattatccttaattgtaaggagagacacatcaaa |
34466786 |
T |
|
| Q |
291 |
agtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttcattg |
390 |
Q |
| |
|
||| |||||||| | |||||||| |||||||||| | || || | ||| |||||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
34466785 |
agtcccaccaccaaggtcaaagacgaaaatatttccttcttccacaaagtcagctctcttgtcaagtccatatgcaatagctgcagcagtgggttcattg |
34466686 |
T |
|
| Q |
391 |
attattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
|||||| | | ||||||||||||||||||| |||||| |
|
|
| T |
34466685 |
attatttgcaaaacattaaggccagcaatagtaccagc |
34466648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 242
Target Start/End: Original strand, 28219842 - 28220045
Alignment:
| Q |
39 |
aaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattc |
138 |
Q |
| |
|
|||||||| ||| ||||||| ||||| ||||| || |||||| ||| |||||||||| |||| || || ||||||||||||||||||| | ||| || |
|
|
| T |
28219842 |
aaataaagaatctacctcaatggtggcgacaacagcaaaagatagtgtcctttttgctctcttgcacgctgttctcaacctccttaaggctcttgagttt |
28219941 |
T |
|
| Q |
139 |
ccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcgg |
238 |
Q |
| |
|
||| | |||||||| || |||||||| || |||||||| | || || |||||||| || |||| |||||||||||||| ||||||||||| || |||| |
|
|
| T |
28219942 |
ccagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctactatcaaagtcctctcccccgaggtgagtgtttccagcgg |
28220041 |
T |
|
| Q |
239 |
tggc |
242 |
Q |
| |
|
|||| |
|
|
| T |
28220042 |
tggc |
28220045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 391
Target Start/End: Original strand, 28220110 - 28220227
Alignment:
| Q |
274 |
aggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctg |
373 |
Q |
| |
|
|||| ||||||||||||||| |||||||||| ||||||| ||||||||||| | ||| || | | |||| ||||| | |||||||||||||| | |
|
|
| T |
28220110 |
aggagagacacatcaaaagtcccaccacccaggtcaaagatgaaaatatttcgttctcccatgcagttagttcttttgtccaatccatatgcaatagcag |
28220209 |
T |
|
| Q |
374 |
cagcagtaggttcattga |
391 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
28220210 |
cagcagtgggttcattga |
28220227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 230
Target Start/End: Original strand, 43744740 - 43744931
Alignment:
| Q |
39 |
aaataaagcatcgacctcaacggtggtgacaaaagaaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattc |
138 |
Q |
| |
|
|||||||| ||| ||||||| |||||||||| || |||||| | | |||||||||| || || || || ||||||||||||||||| | | |||| || |
|
|
| T |
43744740 |
aaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcctttttgctctttcgcatgctgttctcaacctccttaatgctcttgggttt |
43744839 |
T |
|
| Q |
139 |
ccactgatgtccacgttattcttctttttgaactcctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgtt |
230 |
Q |
| |
|
||| | |||||||| || |||||||| || |||||||| | || || |||||||| || ||||| || |||||||| || ||||||||||| |
|
|
| T |
43744840 |
ccagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctattatcaaaatcctctcctccgaggtgagtgtt |
43744931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 428
Target Start/End: Original strand, 43744997 - 43745162
Alignment:
| Q |
263 |
ccttaattgtgaggatagacacatcaaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccata |
362 |
Q |
| |
|
|||||||||| |||| ||||||||||||||| |||||||||| ||||||| |||||||||| | | || | | | ||||||| || || ||||| |
|
|
| T |
43744997 |
ccttaattgtaaggagagacacatcaaaagtcccaccacccaggtcaaagatgaaaatatttcttcctcgcacagagttagttctcttttccagaccata |
43745096 |
T |
|
| Q |
363 |
tgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcaccagc |
428 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| || |||| ||| |||||||| |||||||| |
|
|
| T |
43745097 |
tgcaatagctgcagcagtgggttcattgattatcttcataacatcaagcccagcaatggcaccagc |
43745162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 299
Target Start/End: Original strand, 12528475 - 12528688
Alignment:
| Q |
86 |
tcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactcctcaacaaaata |
185 |
Q |
| |
|
||||||| ||| |||| ||| ||||||||| ||||||| || ||||| |||||| | ||||| || || |||||| | || ||||| | ||||| | |
|
|
| T |
12528475 |
tccttttcgccttctcgcagttagttctcaatctccttagggcttttgagttcccaataatgtcaactttgttcttcctcttaaactctttcacaaagtg |
12528574 |
T |
|
| Q |
186 |
attcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacaca |
285 |
Q |
| |
|
||||||||||| ||||| ||||||||||| ||||||||||||| || || ||||| || ||||| ||||||| | ||| | ||| || | ||||||| |
|
|
| T |
12528575 |
attcaccattcgattatcaaagtcctctcctccaaggtgagtgtctccggcagtggccttgacttcgaagacattattctttactgtaagaagagacaca |
12528674 |
T |
|
| Q |
286 |
tcaaaagtaccacc |
299 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
12528675 |
tcaaaagttccacc |
12528688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 44; Significance: 7e-16; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 187 - 410
Target Start/End: Original strand, 28910654 - 28910877
Alignment:
| Q |
187 |
ttcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcggtggcttttacttcaaagacatcacccttaattgtgaggatagacacat |
286 |
Q |
| |
|
|||||||| || ||||| | |||||| |||| ||||||||||| || |||||||| || |||| ||||| | | ||| |||||| |||| ||| |||| |
|
|
| T |
28910654 |
ttcaccatcctattatcaatgtcctcgaccccgaggtgagtgtttccagcggtggccttaacttggaagaccttatcctgaattgtaaggagagaaacat |
28910753 |
T |
|
| Q |
287 |
caaaagtaccaccacccaaatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctgcagcagtaggttc |
386 |
Q |
| |
|
||||||| |||| ||||| || |||| ||| ||||||| | || |||| ||| ||||||||| |||||||||| ||||||| ||||||| | || |
|
|
| T |
28910754 |
caaaagtcccactacccaggtcgaagatgaaagtatttcgttctccagcacactcagctctcttgtcgaggccatatgaaatagctacagcagtgagctc |
28910853 |
T |
|
| Q |
387 |
attgattattcgaatgacattaag |
410 |
Q |
| |
|
||||||||| || || |||||||| |
|
|
| T |
28910854 |
attgattatccgcataacattaag |
28910877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 425
Target Start/End: Original strand, 11170806 - 11170880
Alignment:
| Q |
351 |
gtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcacc |
425 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||| |||||| | ||||| ||||||||||||||||| |
|
|
| T |
11170806 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacc |
11170880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 425
Target Start/End: Original strand, 11156505 - 11156580
Alignment:
| Q |
350 |
tgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcacc |
425 |
Q |
| |
|
||||||| ||||||||||| || || |||| ||| |||||||||||||| || ||||| |||||||||||| |||| |
|
|
| T |
11156505 |
tgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaataacacc |
11156580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 425
Target Start/End: Original strand, 11196958 - 11197033
Alignment:
| Q |
350 |
tgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcacc |
425 |
Q |
| |
|
||||||| ||||||||||| || || |||| ||| |||||||||||||| || ||||| |||||||||||| |||| |
|
|
| T |
11196958 |
tgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaataacacc |
11197033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 425
Target Start/End: Original strand, 11200123 - 11200198
Alignment:
| Q |
350 |
tgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcacc |
425 |
Q |
| |
|
||||||| ||||||||||| || || |||| ||| |||||||||||||| | ||||| ||||||||||||||||| |
|
|
| T |
11200123 |
tgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcaaaacattgaggccagcaatagcacc |
11200198 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 360 - 409
Target Start/End: Complemental strand, 11314659 - 11314610
Alignment:
| Q |
360 |
atatgcaatagctgcagcagtaggttcattgattattcgaatgacattaa |
409 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||| | |||||||||| |
|
|
| T |
11314659 |
atatgcaatggctgcagcactaggttcattgattatttgcatgacattaa |
11314610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 425
Target Start/End: Original strand, 11209634 - 11209702
Alignment:
| Q |
357 |
gccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcacc |
425 |
Q |
| |
|
|||||||||||| || || |||||||| ||||||| |||||| | ||||| ||||||||||||||||| |
|
|
| T |
11209634 |
gccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacc |
11209702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 425
Target Start/End: Original strand, 11276196 - 11276264
Alignment:
| Q |
357 |
gccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcacc |
425 |
Q |
| |
|
|||||||||||| || || |||||||| ||||| |||||||| || || || ||||||||||||||||| |
|
|
| T |
11276196 |
gccatatgcaattgcagctgcagtaggctcatttattattcgcataacgtttaggccagcaatagcacc |
11276264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1207 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1207
Description:
Target: scaffold1207; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 425
Target Start/End: Original strand, 1120 - 1195
Alignment:
| Q |
350 |
tgtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgacattaaggccagcaatagcacc |
425 |
Q |
| |
|
|||||| |||||||||||| || || |||||||| ||||||| ||||| | ||||| ||||||||||||||||| |
|
|
| T |
1120 |
tgtcaaagccatatgcaattgcagctgcagtaggctcattgagtattcccaaaacattgaggccagcaatagcacc |
1195 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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