View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15120_high_24 (Length: 216)
Name: NF15120_high_24
Description: NF15120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15120_high_24 |
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Alignment Details
Target: chr5 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 30757685 - 30757499
Alignment:
| Q |
11 |
gtgagatgaaacctacacatgctcggaagcaaatgactctgaaatatgttgaaaagaaagatcctgatggtataggttcttctaaagcttttgcagcacc |
110 |
Q |
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| T |
30757685 |
gtgagaagaaacctacacatgctcggaagcaaatgactctgaaatatgttgaaaagaacgatcatgatggtataggttcttctaaagcttttgcagcgcc |
30757586 |
T |
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| Q |
111 |
aattactaataaggcggttattgccattgtgaatgaagagcatatccctgccacaatttcattcggtactgatgacacttcaaatat |
197 |
Q |
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| T |
30757585 |
aattactaataaggcggttattgccattgtgaatgaagagcatatccctgccacaatttcattcggtactgatgacacttcaaatat |
30757499 |
T |
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