View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15124_high_13 (Length: 300)
Name: NF15124_high_13
Description: NF15124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15124_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 13 - 285
Target Start/End: Original strand, 10010304 - 10010577
Alignment:
| Q |
13 |
atactaatttaagctcaaatcaatttgatagcaatatattttaccggattctattcaacctatataaggacaaaaataaaagcaataaccgtgcatccta |
112 |
Q |
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| T |
10010304 |
atactaatttaagctcaaatcaatttgacagcaatatattttaccggattctattcaacctatataaggataaaaataaaagcaattaccgtgcatccta |
10010403 |
T |
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| Q |
113 |
tgtaactaaaattgttaattgcatgttacacatttattgtagaaaaaggagaacagaagccgattccaatcgacctatatatctacatttcaaaagacca |
212 |
Q |
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| T |
10010404 |
tgtaactaaaattgttaattgcatgttacacatttattgtagaaaaaggagaacagaagccgattccaatcaacctatatatctacatttcaaaagacca |
10010503 |
T |
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| Q |
213 |
aa-aggttaacatgaaattattgattttctcaacacatatctacacaatacgaagcaaattttttagaaagtac |
285 |
Q |
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| T |
10010504 |
aagaggttaacatgaaattattgattttctcaacacatatctacacaatacgaagcaaattttttaggaagtac |
10010577 |
T |
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