View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15125_low_4 (Length: 329)
Name: NF15125_low_4
Description: NF15125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15125_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 8647497 - 8647216
Alignment:
| Q |
1 |
aacttaaatgtgtaaaatacgacttataataaattactggacttcatgattatgacatgacatatatagtaatgtatttgtgtgtgaatcaaaaaagttt |
100 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8647497 |
aacttaaatgtgtaaaatacgacttataataaatttctggacttcatgattatgacatgacatatatagtaatgtatttgtgtgtgaatcaaaaaagttt |
8647398 |
T |
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| Q |
101 |
cctaacatgaatatgaaatttgtaattattagcaagtgaaagtaagattaattttcttta--tctttttatgcaggtgaaatcatgtgatgaagtgaagt |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
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| T |
8647397 |
cctaacatgaatatgaaatttgtaattattagcaagtgaaagtaagattaattttctttatctctttatatgcaggtgaaatcatgtgatgaagtgaagt |
8647298 |
T |
|
| Q |
199 |
tgaagagcgtgaagttggaatgccattagaaataagcgtttattttaggcgtaatttatgtagtggttccaaaaataacgtt |
280 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
8647297 |
tgaagagcatgaagttggaatgccattagaaataagcgtttattttaggcgtaatttatgtactggttccaaaaataacgtt |
8647216 |
T |
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