View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15126_high_25 (Length: 339)

Name: NF15126_high_25
Description: NF15126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15126_high_25
NF15126_high_25
[»] chr6 (33 HSPs)
chr6 (11-282)||(28297100-28297371)
chr6 (11-282)||(28514702-28514973)
chr6 (18-282)||(28185944-28186208)
chr6 (11-282)||(28181668-28181939)
chr6 (11-308)||(28235096-28235387)
chr6 (11-317)||(28325998-28326300)
chr6 (19-282)||(28243346-28243609)
chr6 (11-314)||(28227476-28227774)
chr6 (11-152)||(28503795-28503936)
chr6 (24-282)||(28097816-28098074)
chr6 (167-264)||(29826552-29826649)
chr6 (167-262)||(25539114-25539209)
chr6 (167-262)||(26143439-26143534)
chr6 (167-262)||(26647050-26647145)
chr6 (167-262)||(26656536-26656631)
chr6 (167-262)||(26753018-26753113)
chr6 (167-262)||(26762507-26762602)
chr6 (167-257)||(26623847-26623937)
chr6 (167-257)||(26729824-26729914)
chr6 (163-221)||(31288917-31288975)
chr6 (163-216)||(26959743-26959796)
chr6 (77-214)||(28150495-28150632)
chr6 (24-84)||(26849461-26849521)
chr6 (167-262)||(25580293-25580388)
chr6 (167-262)||(26884641-26884736)
chr6 (167-262)||(27530817-27530912)
chr6 (238-293)||(28150439-28150494)
chr6 (196-262)||(25511509-25511575)
chr6 (39-213)||(26937649-26937823)
chr6 (167-281)||(27610636-27610750)
chr6 (167-257)||(27698102-27698192)
chr6 (229-283)||(29846031-29846085)
chr6 (167-257)||(31285135-31285225)
[»] scaffold0038 (4 HSPs)
scaffold0038 (11-308)||(35258-35549)
scaffold0038 (19-282)||(43508-43771)
scaffold0038 (11-314)||(27974-28272)
scaffold0038 (156-317)||(117313-117470)
[»] scaffold0019 (1 HSPs)
scaffold0019 (18-282)||(57661-57926)
[»] chr2 (1 HSPs)
chr2 (24-290)||(3280202-3280468)
[»] chr4 (3 HSPs)
chr4 (24-278)||(5090326-5090580)
chr4 (167-262)||(18731016-18731111)
chr4 (206-262)||(18655028-18655084)
[»] chr1 (2 HSPs)
chr1 (167-262)||(267856-267951)
chr1 (157-213)||(26136508-26136564)
[»] chr8 (1 HSPs)
chr8 (190-260)||(31905624-31905694)
[»] chr5 (1 HSPs)
chr5 (237-277)||(16691423-16691463)


Alignment Details
Target: chr6 (Bit Score: 196; Significance: 1e-106; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 11 - 282
Target Start/End: Original strand, 28297100 - 28297371
Alignment:
Q  11 cacagaccatcatattgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaactt 110  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28297100 cacaaaccatcaaattgatcggctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaactt 28297199  T
Q  111 catcattagatccaaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatctt 210  Q
    || |||||||||  |  | || || |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||    
T  28297200 caccattagatctgagatccagaaatgaatttacttttaggaccctagactggagaccaacggggtaatcggcaacatataaaggaacacgattgatctt 28297299  T
Q  211 gttggatacatattcgactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttt 282  Q
    | ||||||| |||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  28297300 gctggatacgtatttgactatcttctcaataaactcatattcatatccattcctatccaatcaaataagttt 28297371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 11 - 282
Target Start/End: Complemental strand, 28514973 - 28514702
Alignment:
Q  11 cacagaccatcatattgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaactt 110  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28514973 cacaaaccatcaaattgatcggctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaactt 28514874  T
Q  111 catcattagatccaaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatctt 210  Q
    || |||||||||  |  | || || |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||    
T  28514873 caccattagatctgagatccagaaatgaatttacttttaggaccctagactggagaccaacggggtaatcggcaacatataaaggaacacgattgatctt 28514774  T
Q  211 gttggatacatattcgactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttt 282  Q
    | ||||||| |||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  28514773 gctggatacgtatttgactatcttctcaataaactcatattcatatccattcctatccaatcaaataagttt 28514702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 18 - 282
Target Start/End: Complemental strand, 28186208 - 28185944
Alignment:
Q  18 catcatattgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaacttcatcatt 117  Q
    ||||| |||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  28186208 catcaaattgatcagctagggaattataaactgctcttgcaagtgtcgtctttcccattcctccaggcccatagatccctagcatctgaacttcaccatt 28186109  T
Q  118 agatccaaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggat 217  Q
    ||||||||  | ||||||||||||||||||||| ||||||||||||| |||||||||| |||| |||||||||||||||||| |||| |||||||| |||    
T  28186108 agatccaaaatccataagtgaatttacttttagaaccctagactcgataccaacagggaaatcagcaacatataaaggaacatgattgatcttgttagat 28186009  T
Q  218 acatattcgactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttt 282  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||    
T  28186008 acatatttgactatcttctcaataaactcgtgttcatagccattcctacccaataaaataagttt 28185944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 11 - 282
Target Start/End: Complemental strand, 28181939 - 28181668
Alignment:
Q  11 cacagaccatcatattgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaactt 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||    
T  28181939 cacaaaccatcaaattgatcagctatggaattataaactgctcttgcaagcgtcgtctttcccattcctccagtcccatagatccctagcatctgaactt 28181840  T
Q  111 catcattagatccaaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatctt 210  Q
    || |||||||||| || | || || |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||    
T  28181839 caccattagatccgacatccagaaatgaatttacttttaggaccctagactcgagaccaacatagtaatcggcaacatataaaggaacacaattgatctt 28181740  T
Q  211 gttggatacatattcgactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttt 282  Q
     ||||| || |||| ||||||||| || |||||||| |||||||||||||||||||||||||||||||||||    
T  28181739 tttggaaacgtatttgactatcttttcgataaactcatattcatatccattcctacccaatcaaataagttt 28181668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 11 - 308
Target Start/End: Complemental strand, 28235387 - 28235096
Alignment:
Q  11 cacagaccatcatattgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaactt 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||||||||||    
T  28235387 cacaaaccatcaaattgatcagctatggaattataaactgctcttgcaagtgttgtctttccaattccaccagtcccatagatccctagcatctgaactt 28235288  T
Q  111 catcattagatccaaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatctt 210  Q
    || ||||||||||||| | || |  |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||    
T  28235287 caccattagatccaacatccacacatgaagttacttttaggaccctagacttgagaccaacagggtaatcggcaacatataaaggaacatgattgatctt 28235188  T
Q  211 gttggatacatattcgactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttttggtaaattaatgcatcacaaattca 308  Q
    ||| |||||||||| ||||||||||| |||| ||| |||||||||||||||||||| ||  ||||||||| ||||    |||||||||||||||||||    
T  28235187 gtttgatacatatttgactatcttcttaatatacttgtattcatatccattcctacaca--caaataagtcttgg----ttaatgcatcacaaattca 28235096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 11 - 317
Target Start/End: Complemental strand, 28326300 - 28325998
Alignment:
Q  11 cacagaccatcatattgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaactt 110  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  28326300 cacaaaccatcaaattgatcggctatggaattataaactgctcttgcaagtgttgtctttcccattccaccagtcccatagatccctagcatctgaactt 28326201  T
Q  111 catcattagatccaaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatctt 210  Q
     | ||||||||||||| |  |||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| | | |||||    
T  28326200 taccattagatccaacatctataagtgaatttacttctaggatcctagactcgagacctacagggtaatccgcaacatataaaggaacacaactgatctt 28326101  T
Q  211 gttggatacatattcgactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttttggtaaattaatgcatcacaaattcaca 310  Q
      || |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||    |||||||| ||||||||||    
T  28326100 cctgaatacgtatttgactatcttctcaataaactcgtattcatagccattcctacccaatcaaataagtttgagta----aatgcatcgcaaattcaca 28326005  T
Q  311 atcacat 317  Q
    || ||||    
T  28326004 ataacat 28325998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 19 - 282
Target Start/End: Complemental strand, 28243609 - 28243346
Alignment:
Q  19 atcatattgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaacttcatcatta 118  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| |||||| || || ||    
T  28243609 atcaaattgatcagctatggaattataaactgctcttgcaagtgttgtctttcccattccaccagtcccatagatccctagcatatgaactacaccagta 28243510  T
Q  119 gatccaaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggata 218  Q
    ||||| || |  | || |  |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||| ||||||    
T  28243509 gatccgacatcaagaaatttatttacttttaggaccctagactcgagaccaacagggtaatcagcaacatatagaggaacacgattgattttgctggata 28243410  T
Q  219 catattcgactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttt 282  Q
     |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28243409 aatattttactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttt 28243346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 11 - 314
Target Start/End: Complemental strand, 28227774 - 28227476
Alignment:
Q  11 cacagaccatcatattgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaactt 110  Q
    |||| ||||||| ||||||| |||||  ||||||||||||| || |||||||||||||||||||| || | | |||| |||||||||| ||||||  |||    
T  28227774 cacaaaccatcaaattgatcggctataaaattataaactgcccttgcaagtgttgtctttcccattccacgattcccgtagatccctatcatctgtgctt 28227675  T
Q  111 catcattagatccaaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatctt 210  Q
    || ||||||||||||| | |||||||||||||||||||||||||||||| || | ||||||||||||||||||||||| |||||||||| |||| |||||    
T  28227674 caccattagatccaacatccataagtgaatttacttttaggaccctagattcaacaccaacagggtaatcggcaacatgtaaaggaacatgattgatctt 28227575  T
Q  211 gttggatacatattcgactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttttggtaaattaatgcatcacaaattcaca 310  Q
    ||| |||| ||||| |||||||||||| ||||||||| ||||||| ||||||||||||||||||||||  ||||   | | |||||||||||||||||||    
T  28227574 gttagatatatatttgactatcttctcgataaactcgcattcatagccattcctacccaatcaaataa--tttg---agtaaatgcatcacaaattcaca 28227480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 28503936 - 28503795
Alignment:
Q  11 cacagaccatcatattgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaactt 110  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  28503936 cacaaaccatcaaattgatcggctatggaattataaactgctcttgcaagtgttgtctttcccattccaccagtcccatagatccctagcatctgaactt 28503837  T
Q  111 catcattagatccaaccttcataagtgaatttacttttagga 152  Q
     | ||||||||||||| |  |||||||||||||||| |||||    
T  28503836 taccattagatccaacatctataagtgaatttacttctagga 28503795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 282
Target Start/End: Original strand, 28097816 - 28098074
Alignment:
Q  24 attgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaacttcatcattagatcc 123  Q
    ||||| |||| ||| |||||||||| ||| | |||||||||||||| || |||||||| |  ||||||||||| |||||||  |||| ||||||||||||    
T  28097816 attgaccagcaatgaaattataaaccgcttttgcaagtgttgtcttacctatccctcctggtccatagatcccaagcatcttgactttatcattagatcc 28097915  T
Q  124 aaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatat 223  Q
    ||| || | |||||| ||||||||||  || | |   |  || ||||| ||||||||  |||||| |||| | ||| |||| |  |||||||||||||||    
T  28097916 aacttttagaagtgagtttacttttaaaactcgatgttgtaggccaacggggtaatcaacaacatgtaaaaggacatgattcaatttgttggatacatat 28098015  T
Q  224 tcgactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttt 282  Q
    | |||||| | |  |||||||||| ||||||||||||||||  ||||| | ||||||||    
T  28098016 ttgactatttcccgaataaactcgaattcatatccattcctggccaataagataagttt 28098074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 29826649 - 29826552
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattcct 264  Q
    |||||||||||||| |||||||  | ||| ||||| | | |||||||||| || | || |||||||||| |||||||||||||||||||| |||||||    
T  29826649 ccaacagggtaatccgcaacatgaagagggacacgctcagtcttgttggaaacttctttgactatcttcacaataaactcgtattcatattcattcct 29826552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 262
Target Start/End: Complemental strand, 25539209 - 25539114
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattc 262  Q
    ||||||||||| | ||| |||||||||  |||| |||| || |||||||| |  | ||||||||||||||||||||||| ||||||||||| ||||    
T  25539209 ccaacagggtatttggccacatataaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgtattcatatctattc 25539114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 262
Target Start/End: Complemental strand, 26143534 - 26143439
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattc 262  Q
    ||||||||||| | ||| |||| ||||  |||| |||| || |||||||| |  | ||||||||||||||||||||||| ||||||||||| ||||    
T  26143534 ccaacagggtatttggctacatttaaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgtattcatatctattc 26143439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 262
Target Start/End: Complemental strand, 26647145 - 26647050
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattc 262  Q
    ||||||||||| | ||| |||| ||||   |||||||| ||||||||||| |  | ||||||||||||| ||||||||| ||||||||||| ||||    
T  26647145 ccaacagggtatttggctacatgtaaaatgacacgattgatcttgttggagatgtcttcgactatcttcccaataaacttgtattcatatctattc 26647050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 262
Target Start/End: Complemental strand, 26656631 - 26656536
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattc 262  Q
    ||||||||||| | |||||||| ||||  ||||||||| ||||||| ||| |  | || |||||| ||||||||||||| ||||||||||| ||||    
T  26656631 ccaacagggtatttggcaacatgtaaaaaaacacgattgatcttgtcggagatgtctttgactatattctcaataaacttgtattcatatctattc 26656536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 262
Target Start/End: Complemental strand, 26753113 - 26753018
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattc 262  Q
    ||||||||||| | ||| |||| ||||   |||||||| ||||||||||| |  | ||||||||||||| ||||||||| ||||||||||| ||||    
T  26753113 ccaacagggtatttggctacatgtaaaatgacacgattgatcttgttggagatgtcttcgactatcttcccaataaacttgtattcatatctattc 26753018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 262
Target Start/End: Complemental strand, 26762602 - 26762507
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattc 262  Q
    ||||||||||| | |||||||| ||||  ||||||||| ||||||| ||| |  | || |||||| ||||||||||||| ||||||||||| ||||    
T  26762602 ccaacagggtatttggcaacatgtaaaaaaacacgattgatcttgtcggagatgtctttgactatattctcaataaacttgtattcatatctattc 26762507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 26623937 - 26623847
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatc 257  Q
    ||||||||||| |  ||||||| ||| || |||||||| ||||||||||| |  |||| ||||||||| |||||||| || ||||||||||    
T  26623937 ccaacagggtatttagcaacatgtaagggcacacgattgatcttgttggagatgtatttgactatcttttcaataaaatcatattcatatc 26623847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 26729914 - 26729824
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatc 257  Q
    ||||||||||| |  ||||||| ||| || |||||||| ||||||||||| |  |||| ||||||||| |||||||| || ||||||||||    
T  26729914 ccaacagggtatttagcaacatgtaagggcacacgattgatcttgttggagatgtatttgactatcttttcaataaaatcatattcatatc 26729824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 31288975 - 31288917
Alignment:
Q  163 gagaccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacat 221  Q
    |||||||||| ||||||| ||||||| |||||||||| | |||||||||||||| ||||    
T  31288975 gagaccaacaaggtaatcagcaacatgtaaaggaacatggttaatcttgttggagacat 31288917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 26959796 - 26959743
Alignment:
Q  163 gagaccaacagggtaatcggcaacatataaaggaacacgattaatcttgttgga 216  Q
    |||||||||| ||||||| ||||||| |||||||||| | ||||||||||||||    
T  26959796 gagaccaacaaggtaatcagcaacatgtaaaggaacatggttaatcttgttgga 26959743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 214
Target Start/End: Complemental strand, 28150632 - 28150495
Alignment:
Q  77 cctccagtcccatagatccctagcatctgaacttcatcattagatccaaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggt 176  Q
    |||||||  ||||||||||||| |||||  ||||  |||||| |||||||    | ||||||||||||| || |||| | | |||  || ||||||||||    
T  28150632 cctccaggtccatagatccctatcatcttgactttgtcattaaatccaacagctagaagtgaatttactattgggactcgacactgcaggccaacagggt 28150533  T
Q  177 aatcggcaacatataaaggaacacgattaatcttgttg 214  Q
    ||||  |||||| |||||| |||||| |||||||||||    
T  28150532 aatcaacaacatgtaaagggacacgactaatcttgttg 28150495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 26849521 - 26849461
Alignment:
Q  24 attgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagt 84  Q
    |||||||||| || |||||||||||||||   ||||||||||| |||||||| ||||||||    
T  26849521 attgatcagcaatcgaattataaactgcttgagcaagtgttgtttttcccattcctccagt 26849461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 262
Target Start/End: Complemental strand, 25580388 - 25580293
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattc 262  Q
    ||||||||||| | ||| || | ||||  |||| |||| || |||||||| |  | ||||||||||||||||||||||| ||||||||||| ||||    
T  25580388 ccaacagggtatttggctacgtttaaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgtattcatatctattc 25580293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 262
Target Start/End: Complemental strand, 26884736 - 26884641
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattc 262  Q
    ||||||||||| | ||| |||| ||||  ||||||||| || |||| ||| | || ||||||||||||| | |||||||||||||| |||| ||||    
T  26884736 ccaacagggtatttggctacatgtaaaacaacacgattgattttgtcggagatatcttcgactatcttcccgataaactcgtattcgtatctattc 26884641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 27530817 - 27530912
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattc 262  Q
    |||||||| || | |||||||| ||| ||  ||||| ||||| ||||||| |  | ||||||||||||  ||||||||||||||||||||| ||||    
T  27530817 ccaacaggatatttggcaacatctaagggctcacgactaatcctgttggaaatgtcttcgactatctttccaataaactcgtattcatatctattc 27530912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 28150494 - 28150439
Alignment:
Q  238 aataaactcgtattcatatccattcctacccaatcaaataagttttggtaaattaa 293  Q
    |||||||||| |||||||||||||||| |||||| | ||||||||  |||||||||    
T  28150494 aataaactcgaattcatatccattcctgcccaataagataagtttgagtaaattaa 28150439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 25511575 - 25511509
Alignment:
Q  196 aacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattc 262  Q
    |||| |||| ||||||||||| |  | ||||||||||||||||||||||| ||||||| ||| ||||    
T  25511575 aacatgattgatcttgttggagatgtcttcgactatcttctcaataaacttgtattcagatctattc 25511509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 213
Target Start/End: Complemental strand, 26937823 - 26937649
Alignment:
Q  39 aattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaacttcatcattagatccaaccttcataagtga 138  Q
    ||||||||| |||||  ||||||||||  || || || || ||| ||||||||||||||| |||    ||| |||||| | ||||||  |||| ||| ||    
T  26937823 aattataaattgctcgtgcaagtgttgatttaccaattccgccaatcccatagatccctaccatacatactccatcatcatatccaatattcagaagaga 26937724  T
Q  139 atttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatcttgtt 213  Q
    |||||||| ||| |  | |||||  || ||||| |||||||| ||||||| |||||||  |||||| ||||||||    
T  26937723 atttacttgtagcaatcgagactgcagtccaacggggtaatccgcaacatgtaaaggaggacgattgatcttgtt 26937649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 281
Target Start/End: Original strand, 27610636 - 27610750
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattcctac 266  Q
    ||||||||||||| |||||||| ||| ||   |||| | ||||||||||| |  |||| ||||||||   || |||||||||||||||||| |||| | |    
T  27610636 ccaacagggtaattggcaacatgtaagggttgacgactgatcttgttggagatgtatttgactatctctccagtaaactcgtattcatatctattcatgc 27610735  T
Q  267 ccaatcaaataagtt 281  Q
    ||||| | |||||||    
T  27610736 ccaataagataagtt 27610750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 27698102 - 27698192
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatc 257  Q
    ||||||||||||| |||||||| ||| ||   |||| | ||||||||||| |  |||| ||||||||  |||||||||| |||||||||||    
T  27698102 ccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatctcttcaataaacttgtattcatatc 27698192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 29846031 - 29846085
Alignment:
Q  229 tatcttctcaataaactcgtattcatatccattcctacccaatcaaataagtttt 283  Q
    ||||||| |||||||||||||||||||| ||||||| ||| || | |||||||||    
T  29846031 tatcttcacaataaactcgtattcatattcattcctgcccgatgagataagtttt 29846085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 31285225 - 31285135
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatc 257  Q
    ||||||||||||| |||||||| ||| || |||||||| ||||||||||| |  |||| |||||| |   ||||||| || ||||||||||    
T  31285225 ccaacagggtaattggcaacatgtaagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcatatc 31285135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 178; Significance: 6e-96; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 11 - 308
Target Start/End: Complemental strand, 35549 - 35258
Alignment:
Q  11 cacagaccatcatattgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaactt 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||||||||||    
T  35549 cacaaaccatcaaattgatcagctatggaattataaactgctcttgcaagtgttgtctttccaattccaccagtcccatagatccctagcatctgaactt 35450  T
Q  111 catcattagatccaaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatctt 210  Q
    || ||||||||||||| | || |  |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||    
T  35449 caccattagatccaacatccacacatgaagttacttttaggaccctagacttgagaccaacagggtaatcggcaacatataaaggaacatgattgatctt 35350  T
Q  211 gttggatacatattcgactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttttggtaaattaatgcatcacaaattca 308  Q
    ||| |||||||||| ||||||||||| |||| ||| |||||||||||||||||||| ||  ||||||||| ||||    |||||||||||||||||||    
T  35349 gtttgatacatatttgactatcttcttaatatacttgtattcatatccattcctacaca--caaataagtcttgg----ttaatgcatcacaaattca 35258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 19 - 282
Target Start/End: Complemental strand, 43771 - 43508
Alignment:
Q  19 atcatattgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaacttcatcatta 118  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| |||||| || || ||    
T  43771 atcaaattgatcagctatggaattataaactgctcttgcaagtgttgtctttcccattccaccagtcccatagatccctagcatatgaactacaccagta 43672  T
Q  119 gatccaaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggata 218  Q
    ||||| || |  | || |  |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||| ||||||    
T  43671 gatccgacatcaagaaatttatttacttttaggaccctagactcgagaccaacagggtaatcagcaacatatagaggaacacgattgattttgctggata 43572  T
Q  219 catattcgactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttt 282  Q
     |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43571 aatattttactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttt 43508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 11 - 314
Target Start/End: Complemental strand, 28272 - 27974
Alignment:
Q  11 cacagaccatcatattgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaactt 110  Q
    |||| ||||||| ||||||| |||||  ||||||||||||| || |||||||||||||||||||| || | | |||| |||||||||| ||||||  |||    
T  28272 cacaaaccatcaaattgatcggctataaaattataaactgcccttgcaagtgttgtctttcccattccacgattcccgtagatccctatcatctgtgctt 28173  T
Q  111 catcattagatccaaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatctt 210  Q
    || ||||||||||||| | |||||||||||||||||||||||||||||| || | ||||||||||||||||||||||| |||||||||| |||| |||||    
T  28172 caccattagatccaacatccataagtgaatttacttttaggaccctagattcaacaccaacagggtaatcggcaacatgtaaaggaacatgattgatctt 28073  T
Q  211 gttggatacatattcgactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttttggtaaattaatgcatcacaaattcaca 310  Q
    ||| |||| ||||| |||||||||||| ||||||||| ||||||| ||||||||||||||||||||||  ||||   | | |||||||||||||||||||    
T  28072 gttagatatatatttgactatcttctcgataaactcgcattcatagccattcctacccaatcaaataa--tttg---agtaaatgcatcacaaattcaca 27978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 317
Target Start/End: Complemental strand, 117470 - 117313
Alignment:
Q  156 tagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcata 255  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| | | |||||  || |||| |||| ||||||||||||||||||||||||||||||    
T  117470 tagactcgagacctacagggtaatccgcaacatataaaggaacacaactgatcttcctgaatacgtatttgactatcttctcaataaactcgtattcata 117371  T
Q  256 tccattcctacccaatcaaataagttttggtaaattaatgcatcacaaattcacaatcacat 317  Q
     ||||||||||||||||||||||||||  |||    |||||||| |||||||||||| ||||    
T  117370 gccattcctacccaatcaaataagtttgagta----aatgcatcgcaaattcacaataacat 117313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 18 - 282
Target Start/End: Original strand, 57661 - 57926
Alignment:
Q  18 catcatattgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaacttcatcatt 117  Q
    ||||| ||||||| |||||||||||| |||||||||| |||||||||||||||||||| |||||| | || |||||||||||||||||||||||| ||||    
T  57661 catcaaattgatcggctatggaattaaaaactgctctagcaagtgttgtctttcccattcctccaattccgtagatccctagcatctgaacttcaccatt 57760  T
Q  118 agatccaaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggat 217  Q
    ||||| ||| | || ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||| |||||||| |||    
T  57761 agatctaacatccagaagtgaatttacttttaggaccctagattcgataccaacagggtaatcggcaacatataaaggaacatgattgatcttgttagat 57860  T
Q  218 acatattcgactatcttctcaataaactcgtattcatatccattcctaccc-aatcaaataagttt 282  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||    
T  57861 acatatttgactatcttctcaataaactcgcattcatatccattcctacccaaatgaaataagttt 57926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 24 - 290
Target Start/End: Complemental strand, 3280468 - 3280202
Alignment:
Q  24 attgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaacttcatcattagatcc 123  Q
    |||||| ||| ||| |||||||||||||||| ||||| |||||||| ||||| ||||||   |||||||| |||| |||||  ||||||| ||||||| |    
T  3280468 attgattagcaatgaaattataaactgctcttgcaagagttgtcttacccattcctccaagtccatagatacctatcatcttgacttcataattagatgc 3280369  T
Q  124 aaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatat 223  Q
    ||| |  | ||||||||||||||| ||||| | |||||  |  ||||| ||||||||| |||||| ||||||| ||||||| |||||||||||||||| |    
T  3280368 aacttctagaagtgaatttactttaaggactcgagactgcatgccaaccgggtaatcgacaacatgtaaaggagcacgatttatcttgttggatacattt 3280269  T
Q  224 tcgactatcttctcaataaactcgtattcatatccattcctacccaatcaaataagttttggtaaat 290  Q
    | |||||| | | | ||||||| ||||| |||| ||||||| |||||||| ||||||||| ||||||    
T  3280268 ttgactatatcccctataaacttgtattgatattcattcctgcccaatcatataagtttttgtaaat 3280202  T

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Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 278
Target Start/End: Original strand, 5090326 - 5090580
Alignment:
Q  24 attgatcagctatggaattataaactgctctggcaagtgttgtctttcccatccctccagtcccatagatccctagcatctgaacttcatcattagatcc 123  Q
    |||||| ||| ||| |||| |||| |||| |  ||||||| || || ||||| |||||||||||||||||||||||||| || |||| ||||||||| ||    
T  5090326 attgatgagcaatgaaattgtaaattgcttttccaagtgtggttttacccattcctccagtcccatagatccctagcatttggactttatcattagaacc 5090425  T
Q  124 aaccttcataagtgaatttacttttaggaccctagactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatat 223  Q
    ||  | ||  ||||||| || ||| || || | || ||| |  ||||| |||||||| ||||||| |||||||    |||| ||||||||||| ||||||    
T  5090426 aatatccagtagtgaatataatttcagaacacgaggctctaatccaaccgggtaatcagcaacatgtaaaggagtgtgattgatcttgttggagacatat 5090525  T
Q  224 tcgactatcttctcaataaactcgtattcatatccattcctacccaatcaaataa 278  Q
      ||||||| ||| |||||||||||||||||||||| ||||| | ||||| ||||    
T  5090526 gtgactatcatctgaataaactcgtattcatatccagtcctatcaaatcagataa 5090580  T

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Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 18731016 - 18731111
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattc 262  Q
    ||||||||||||  |||||||| ||| ||   |||| | ||||||||||| ||||||| ||||||||| |||||||||| ||||||||||| ||||    
T  18731016 ccaacagggtaaatggcaacatgtaagggctgacgactgatcttgttggagacatatttgactatcttttcaataaacttgtattcatatctattc 18731111  T

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Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 18655028 - 18655084
Alignment:
Q  206 atcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattc 262  Q
    ||||||||||| ||||||| |||||||||  ||||||||| ||||||||||| ||||    
T  18655028 atcttgttggagacatatttgactatctttccaataaacttgtattcatatctattc 18655084  T

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Target: chr1 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 267856 - 267951
Alignment:
Q  167 ccaacagggtaatcggcaacatataaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccattc 262  Q
    ||||||||||||| |||||||| ||| ||  ||||| | ||||||||||| |  |||| ||||||||   ||||||||| ||||||||||| ||||    
T  267856 ccaacagggtaattggcaacatgtaagggctcacgactgatcttgttggagatgtatttgactatctctccaataaacttgtattcatatctattc 267951  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 26136564 - 26136508
Alignment:
Q  157 agactcgagaccaacagggtaatcggcaacatataaaggaacacgattaatcttgtt 213  Q
    ||||||||| ||||| |||| ||||||||||| |||| ||||||| || ||||||||    
T  26136564 agactcgagcccaacggggtgatcggcaacatgtaaaagaacacggttgatcttgtt 26136508  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 31905694 - 31905624
Alignment:
Q  190 taaaggaacacgattaatcttgttggatacatattcgactatcttctcaataaactcgtattcatatccat 260  Q
    ||||| ||||||||| ||||| ||||| |||| ||| || |||||  ||||||||||||| ||||||||||    
T  31905694 taaagcaacacgattcatcttcttggaaacatgttcaacaatctttccaataaactcgtactcatatccat 31905624  T

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Target: chr5 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 277
Target Start/End: Complemental strand, 16691463 - 16691423
Alignment:
Q  237 caataaactcgtattcatatccattcctacccaatcaaata 277  Q
    |||||||||||| ||||||| ||||||||| ||||||||||    
T  16691463 caataaactcgtgttcatattcattcctacacaatcaaata 16691423  T

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