View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15126_high_36 (Length: 268)
Name: NF15126_high_36
Description: NF15126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15126_high_36 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 42221763 - 42222003
Alignment:
| Q |
18 |
atggttcaacaccgacatgaaactatcgtaaagattaagaattaagaaaggtttagaatgatgttttgtttgttggttcaatttggtcacggcttgggtt |
117 |
Q |
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| T |
42221763 |
atggttcaacaccgacatgaaactatcgtaaagattaagaattaaaaaaggtttagaatgatgttttgtttgttggttcaatttggtcacggcttgggtt |
42221862 |
T |
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| Q |
118 |
aagagtgtgttatggtaaactgcgaggaggttgttagatgtttcgttgcattgtttgaatgaggttgaagctgtcattgaaggtaggcatccaatcggtt |
217 |
Q |
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| T |
42221863 |
aagagtatgttatggtaaaatgcgaggaggttgttagatgtttcgttgcattgtttgaatgaggttgaagttgtcattgaaggtagacatccaatcggtt |
42221962 |
T |
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| Q |
218 |
gtagattattcacaattactttcttcactcccaatcctttg |
258 |
Q |
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| T |
42221963 |
gtagattattcacaattactttcttcactcccaatcctttg |
42222003 |
T |
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