View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15126_low_13 (Length: 453)
Name: NF15126_low_13
Description: NF15126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15126_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 386; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 17 - 445
Target Start/End: Complemental strand, 37510913 - 37510484
Alignment:
| Q |
17 |
attttacttttactaatcaatatatcaaccaaaaactaaattttatttccttcaaaaaatgccgacctatggaannnnnnnn-ccagctcctcgttatgg |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
37510913 |
attttacttttactaatcaatatatcaaccaaaaactaaattttatttccttcaaaaaatgccgacctatggaatttttttttccagctcctcgttatgg |
37510814 |
T |
|
| Q |
116 |
caactaataaaaatttgacggacaaccatgttgtcgtgtacaatttttgaggtcgattccatttctctcgtgacaaagacggatttctagcaattcggaa |
215 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
37510813 |
caaccaataaaaatttgacggacaaccatgttgtcgtgtacaatttttgaggtcgattccatttctctcgtgacaaagacggatttctagcaattcagaa |
37510714 |
T |
|
| Q |
216 |
gtccaaaatgtagtttcattgctgcaaataagttgaggtgtaaagccaacacttttttctattgcttcaagggtatatgctagaggcctaataccatagc |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37510713 |
gtccaaaatgtagtttcattgctgcaaataagttgaggtgtaaagccaacacttttttctattgcttcaagggtatatgctagaggcctaataccatagc |
37510614 |
T |
|
| Q |
316 |
gtccaagatcatctctaagattgcgacttccccaattatataatgcaaccgagaagtattgatgtatatcaaatgttggataggaacatagaccgtgttt |
415 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37510613 |
gtccaagatcatctgtaagattgcgacttccccaattatataatgcaaccgagaagtattgatgtatatcaaatgttggataggaacatagaccgtgttt |
37510514 |
T |
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| Q |
416 |
tttccattgatttgaccaaagagtataatc |
445 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
37510513 |
tttccattgatttgaccaaagagtataatc |
37510484 |
T |
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