View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15126_low_34 (Length: 299)

Name: NF15126_low_34
Description: NF15126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15126_low_34
NF15126_low_34
[»] scaffold0536 (1 HSPs)
scaffold0536 (1-254)||(2726-2969)
[»] chr8 (20 HSPs)
chr8 (144-254)||(10147912-10148014)
chr8 (154-254)||(37612629-37612720)
chr8 (154-202)||(1810324-1810372)
chr8 (156-254)||(30026942-30027031)
chr8 (153-254)||(14600760-14600852)
chr8 (158-254)||(41361712-41361799)
chr8 (219-254)||(9501622-9501657)
chr8 (219-254)||(31308180-31308215)
chr8 (154-193)||(31407862-31407901)
chr8 (156-206)||(7583865-7583915)
chr8 (160-254)||(10338884-10338969)
chr8 (144-194)||(11161848-11161898)
chr8 (156-254)||(39067751-39067840)
chr8 (144-253)||(2025272-2025372)
chr8 (153-254)||(23971156-23971248)
chr8 (219-254)||(2234532-2234567)
chr8 (219-254)||(12329658-12329693)
chr8 (160-203)||(24699812-24699855)
chr8 (154-193)||(24791282-24791321)
chr8 (219-254)||(37128548-37128583)
[»] chr3 (24 HSPs)
chr3 (156-254)||(39610182-39610279)
chr3 (156-254)||(36691861-36691950)
chr3 (156-254)||(30156344-30156432)
chr3 (156-254)||(11819061-11819150)
chr3 (156-254)||(14585440-14585529)
chr3 (154-254)||(31270302-31270393)
chr3 (156-254)||(31462808-31462897)
chr3 (156-254)||(48652502-48652591)
chr3 (154-194)||(48400875-48400915)
chr3 (154-194)||(53155543-53155583)
chr3 (155-254)||(27189456-27189546)
chr3 (219-254)||(35174736-35174771)
chr3 (219-254)||(41868356-41868391)
chr3 (219-254)||(54239080-54239115)
chr3 (156-206)||(1074994-1075044)
chr3 (156-254)||(3456921-3457010)
chr3 (160-202)||(32080859-32080901)
chr3 (156-254)||(34960920-34961009)
chr3 (156-187)||(13702092-13702123)
chr3 (219-254)||(22484997-22485032)
chr3 (158-193)||(40883983-40884018)
chr3 (219-254)||(49628149-49628184)
chr3 (154-202)||(4206616-4206664)
chr3 (219-251)||(40883933-40883965)
[»] chr2 (36 HSPs)
chr2 (156-254)||(13879060-13879157)
chr2 (156-254)||(14019185-14019282)
chr2 (154-254)||(15919850-15919941)
chr2 (160-254)||(27095687-27095772)
chr2 (154-252)||(43474184-43474273)
chr2 (116-254)||(12704625-12704754)
chr2 (153-206)||(32015195-32015248)
chr2 (154-254)||(18089446-18089537)
chr2 (156-254)||(11937912-11938002)
chr2 (156-254)||(17268178-17268267)
chr2 (156-254)||(22597113-22597202)
chr2 (144-254)||(25067818-25067919)
chr2 (160-254)||(33012059-33012144)
chr2 (160-254)||(44942267-44942352)
chr2 (154-254)||(5754264-5754355)
chr2 (156-202)||(20561229-20561275)
chr2 (156-200)||(12891188-12891232)
chr2 (153-253)||(38384497-38384588)
chr2 (219-254)||(4732103-4732138)
chr2 (160-254)||(4604361-4604446)
chr2 (156-254)||(9690027-9690116)
chr2 (160-202)||(28261990-28262032)
chr2 (156-192)||(7073055-7073091)
chr2 (155-199)||(36867985-36868029)
chr2 (219-254)||(4426712-4426747)
chr2 (219-250)||(13740718-13740749)
chr2 (219-254)||(34416815-34416850)
chr2 (219-254)||(35333537-35333572)
chr2 (219-254)||(38535359-38535394)
chr2 (156-187)||(38535417-38535448)
chr2 (156-194)||(9978774-9978812)
chr2 (219-253)||(34963121-34963155)
chr2 (156-206)||(41797593-41797643)
chr2 (226-254)||(10287060-10287088)
chr2 (156-199)||(15674057-15674100)
chr2 (222-254)||(32314477-32314509)
[»] scaffold0312 (1 HSPs)
scaffold0312 (156-254)||(6115-6204)
[»] chr5 (21 HSPs)
chr5 (156-254)||(17096293-17096385)
chr5 (156-254)||(17331306-17331395)
chr5 (156-254)||(32347768-32347858)
chr5 (162-253)||(17699537-17699619)
chr5 (154-202)||(7771903-7771951)
chr5 (154-254)||(43493848-43493939)
chr5 (156-254)||(33164522-33164611)
chr5 (161-254)||(42609127-42609211)
chr5 (154-206)||(981118-981170)
chr5 (158-254)||(29097769-29097856)
chr5 (219-254)||(3740389-3740424)
chr5 (156-254)||(28040607-28040696)
chr5 (154-199)||(6281020-6281065)
chr5 (154-202)||(26295155-26295203)
chr5 (154-254)||(27241040-27241131)
chr5 (219-254)||(178160-178195)
chr5 (219-254)||(6635282-6635317)
chr5 (219-254)||(12891708-12891743)
chr5 (219-254)||(39179882-39179917)
chr5 (219-254)||(39531457-39531492)
chr5 (157-194)||(20483165-20483202)
[»] chr4 (38 HSPs)
chr4 (144-254)||(24825615-24825716)
chr4 (154-254)||(43244435-43244526)
chr4 (95-254)||(29922751-29922904)
chr4 (157-253)||(394329-394416)
chr4 (158-254)||(31521962-31522049)
chr4 (156-254)||(7060302-7060391)
chr4 (156-254)||(22757072-22757161)
chr4 (156-254)||(29268831-29268920)
chr4 (156-254)||(44757096-44757185)
chr4 (163-254)||(13965545-13965627)
chr4 (144-254)||(6911646-6911747)
chr4 (158-254)||(51152105-51152192)
chr4 (156-254)||(24568767-24568856)
chr4 (158-199)||(8712510-8712551)
chr4 (221-254)||(24611853-24611886)
chr4 (154-194)||(478116-478156)
chr4 (154-254)||(24100115-24100206)
chr4 (154-254)||(26742517-26742608)
chr4 (158-194)||(27394810-27394846)
chr4 (223-254)||(2447836-2447867)
chr4 (219-254)||(6881988-6882023)
chr4 (219-254)||(7083870-7083905)
chr4 (219-254)||(7861259-7861294)
chr4 (215-254)||(8517510-8517549)
chr4 (155-202)||(11210410-11210457)
chr4 (219-254)||(26674404-26674439)
chr4 (154-193)||(39523394-39523433)
chr4 (219-254)||(43493341-43493376)
chr4 (219-254)||(50801249-50801284)
chr4 (219-249)||(22049464-22049494)
chr4 (219-253)||(39523441-39523475)
chr4 (156-254)||(39837572-39837662)
chr4 (154-199)||(24611899-24611944)
chr4 (158-202)||(19745369-19745413)
chr4 (158-202)||(19794393-19794437)
chr4 (222-250)||(20399961-20399989)
chr4 (154-194)||(20400008-20400048)
chr4 (154-194)||(25658143-25658183)
[»] chr1 (19 HSPs)
chr1 (156-254)||(424345-424434)
chr1 (156-254)||(7995614-7995703)
chr1 (154-254)||(28678184-28678275)
chr1 (158-254)||(32784088-32784175)
chr1 (156-206)||(12871599-12871649)
chr1 (156-250)||(33487088-33487173)
chr1 (156-254)||(45193680-45193769)
chr1 (154-199)||(33939102-33939147)
chr1 (219-254)||(37822399-37822434)
chr1 (160-254)||(3232770-3232855)
chr1 (160-254)||(14265266-14265351)
chr1 (156-254)||(27534677-27534766)
chr1 (154-194)||(29205261-29205301)
chr1 (219-254)||(44517179-44517214)
chr1 (156-194)||(18343592-18343630)
chr1 (157-206)||(15791581-15791630)
chr1 (156-193)||(45750456-45750493)
chr1 (226-254)||(4882413-4882441)
chr1 (154-194)||(20411549-20411589)
[»] chr7 (35 HSPs)
chr7 (156-254)||(3266360-3266455)
chr7 (154-254)||(45457610-45457701)
chr7 (160-254)||(28664966-28665051)
chr7 (154-254)||(41287933-41288025)
chr7 (158-254)||(22747562-22747648)
chr7 (158-254)||(9785297-9785384)
chr7 (159-254)||(17473777-17473863)
chr7 (159-254)||(17579351-17579437)
chr7 (156-254)||(21990639-21990729)
chr7 (156-254)||(45482042-45482131)
chr7 (156-254)||(46026083-46026172)
chr7 (156-250)||(48304453-48304538)
chr7 (158-254)||(5684345-5684432)
chr7 (158-254)||(5709395-5709482)
chr7 (154-254)||(21603439-21603529)
chr7 (219-254)||(32740785-32740820)
chr7 (219-254)||(42644708-42644743)
chr7 (156-206)||(24988448-24988497)
chr7 (156-254)||(36579366-36579455)
chr7 (156-202)||(40761567-40761613)
chr7 (154-194)||(6667371-6667411)
chr7 (154-202)||(10574357-10574405)
chr7 (154-254)||(42603823-42603914)
chr7 (219-254)||(10094473-10094508)
chr7 (219-254)||(11833051-11833086)
chr7 (219-254)||(15674666-15674701)
chr7 (219-254)||(17509258-17509293)
chr7 (219-254)||(17543921-17543956)
chr7 (219-254)||(39533029-39533064)
chr7 (160-206)||(21954912-21954957)
chr7 (160-202)||(36719638-36719680)
chr7 (160-193)||(39533081-39533114)
chr7 (156-184)||(15674740-15674768)
chr7 (156-196)||(42644654-42644694)
chr7 (226-254)||(43847109-43847137)
[»] chr6 (13 HSPs)
chr6 (156-254)||(6419912-6420001)
chr6 (154-254)||(14783225-14783316)
chr6 (156-254)||(15590133-15590222)
chr6 (154-254)||(21507862-21507953)
chr6 (144-254)||(4921935-4922037)
chr6 (156-254)||(12481424-12481513)
chr6 (160-254)||(31937473-31937557)
chr6 (154-254)||(8693711-8693805)
chr6 (157-206)||(35219996-35220045)
chr6 (162-206)||(29927472-29927516)
chr6 (156-194)||(23654228-23654266)
chr6 (153-206)||(2304903-2304956)
chr6 (156-193)||(4084996-4085033)
[»] scaffold0155 (1 HSPs)
scaffold0155 (161-254)||(35065-35149)
[»] scaffold1379 (2 HSPs)
scaffold1379 (156-254)||(1140-1229)
scaffold1379 (219-254)||(7-42)
[»] scaffold0294 (1 HSPs)
scaffold0294 (163-254)||(4121-4202)
[»] scaffold0056 (1 HSPs)
scaffold0056 (219-254)||(74196-74231)
[»] scaffold0432 (1 HSPs)
scaffold0432 (158-254)||(2471-2557)
[»] scaffold0321 (1 HSPs)
scaffold0321 (219-254)||(7178-7213)
[»] scaffold0121 (1 HSPs)
scaffold0121 (156-202)||(13346-13392)
[»] scaffold0001 (1 HSPs)
scaffold0001 (225-254)||(404312-404341)


Alignment Details
Target: scaffold0536 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 2726 - 2969
Alignment:
Q  1 tgtattcatattatgttcaaaaacatcgatagtatttcaaaattatgcccattgtaatccaccaacgaaatcacctctctaatcatcaaacaacagttct 100  Q
    ||||||||||||||||||||||| ||| | |||||||||||||||||||||||   | ||| |||||||| || || |||||||| | || || |||| |    
T  2726 tgtattcatattatgttcaaaaatatcaaaagtatttcaaaattatgcccattaagaaccaacaacgaaaacatctatctaatcaactaaaaaaagttat 2825  T
Q  101 ctctttacacgtctactcaaaccctagtcatcacccnnnnnnncttcttcccgttagaggggtgatttagggtcaattttgacccaataatcactcctcc 200  Q
    || ||| | | ||| |||||||||||||| ||||||       |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||    
T  2826 cttttttctcttcttctcaaaccctagtcgtcaccccttt---cttcttcttgttagaggggtgatttagggtcaattttgacccaataatcacccctcc 2922  T
Q  201 gagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||         || ||||||||||||||||||||||||||||||||||||    
T  2923 gagttgtt-------tttttccttctatcctaattgaataagtgatttcacata 2969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 10147912 - 10148014
Alignment:
Q  144 cttcttcccgttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagt 243  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||         || || ||||||||||||||||||||||    
T  10147912 cttcttcatgttagaggggtgatttagggtcaattttgacccaataatcacccctccgagttgt--------ttttttcttctatcctaattgaataagt 10148003  T
Q  244 gatttcacata 254  Q
    |||||||||||    
T  10148004 gatttcacata 10148014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 37612629 - 37612720
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||| ||          || |||||||||||||| ||||||||||||||||||||    
T  37612629 ttagaggggtgatttagggtcaattttgacccaaaaatcacccctccgaatt---------ttttttccttctatcctagttgaataagtgatttcacat 37612719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 1810372 - 1810324
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccga 202  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  1810372 ttagaggggtgatttagggtcaattttgacccaaaaatcacccctccga 1810324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 30027031 - 30026942
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||| ||||||||||| |||||| | |||||||||         || || |||||||| ||||||||||||||||||||||||    
T  30027031 agaggggtgatttagggtcatttttgacccaaaaatcacccatccgagttg---------ttttttcttctatcataattgaataagtgatttcacata 30026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 254
Target Start/End: Complemental strand, 14600852 - 14600760
Alignment:
Q  153 gttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcaca 252  Q
    ||||||| ||||||||||||||||||||||||||| |||||  | |||||||||         || || |||||||||||||||||||| ||||||||||    
T  14600852 gttagagaggtgatttagggtcaattttgacccaaaaatcatccatccgagttg---------ttttttcttctatcctaattgaataactgatttcaca 14600762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 41361712 - 41361799
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||| |||         || ||||||||| | ||||||||||||||||||||||||    
T  41361712 aggggtgatttatggtcaattttgacccaaaaatcacccctccgatttg---------tttttccttctaccgtaattgaataagtgatttcacata 41361799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 9501622 - 9501657
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  9501622 ttccttctatcctaattgaataagtgatttcacata 9501657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 31308180 - 31308215
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  31308180 ttccttctatcctaattgaataagtgatttcacata 31308215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 31407901 - 31407862
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatca 193  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  31407901 ttagaggggtgatttagggtcaattttgacccaaaaatca 31407862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 7583915 - 7583865
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttg 206  Q
    |||||||||||||||| ||||||||||||||| |||||| | |||||||||    
T  7583915 agaggggtgatttaggatcaattttgacccaaaaatcacccatccgagttg 7583865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 10338969 - 10338884
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||| ||||||||||||| ||| |||||| ||||||| |||         || |||||| |||||||||||||||||||||||||||||    
T  10338969 gggtgatttaaggtcaattttgacgcaaaaatcacccctccgaattg---------tttttccttttatcctaattgaataagtgatttcacata 10338884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 11161848 - 11161898
Alignment:
Q  144 cttcttcccgttagaggggtgatttagggtcaattttgacccaataatcac 194  Q
    |||||||  ||||||||||| ||||||||||||||||||||||| ||||||    
T  11161848 cttcttcttgttagaggggtaatttagggtcaattttgacccaaaaatcac 11161898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 39067840 - 39067751
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| ||||||||||||||||| |||||||  ||| | |||         || ||||||||||||||||| ||||||||||||||||||    
T  39067840 agaggggtgatttaaggtcaattttgacccaaaaatcactgttccaaattg---------tttttccttctatcctaatttaataagtgatttcacata 39067751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 2025372 - 2025272
Alignment:
Q  144 cttcttcccgttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagt 243  Q
    |||||||  ||||||||||||||||| |||||||||||||| || |||||| | ||| |||||         || |||||| ||| ||||||||||||||    
T  2025372 cttcttcttgttagaggggtgatttatggtcaattttgaccaaaaaatcacccttccaagttg---------tttttccttttattctaattgaataagt 2025282  T
Q  244 gatttcacat 253  Q
    ||||||||||    
T  2025281 gatttcacat 2025272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 254
Target Start/End: Complemental strand, 23971248 - 23971156
Alignment:
Q  153 gttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcaca 252  Q
    ||||||| |||||||||  || |||||||||| || |||||||| |||||||||         || |||||||||| |||||||||||||||||||||||    
T  23971248 gttagagaggtgatttaaagtaaattttgaccaaaaaatcactcatccgagttg---------tttttccttctattctaattgaataagtgatttcaca 23971158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 2234567 - 2234532
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| |||||||||||||||||||||    
T  2234567 ttccttctatcctagttgaataagtgatttcacata 2234532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 12329658 - 12329693
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||| |||||||||||||||||||||||||||||    
T  12329658 ttccttttatcctaattgaataagtgatttcacata 12329693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 24699812 - 24699855
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatcactcctccgag 203  Q
    |||||||||||||||||||||||||||| |||||| | ||||||    
T  24699812 gggtgatttagggtcaattttgacccaaaaatcacccatccgag 24699855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 24791321 - 24791282
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatca 193  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  24791321 ttagaggggtgatttatggtcaattttgacccaaaaatca 24791282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 37128583 - 37128548
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| |||||||||||||||||||||    
T  37128583 ttccttctatcctagttgaataagtgatttcacata 37128548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 39610182 - 39610279
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  39610182 agaggggtgatttatggtcaattttgacccaataatcacccctccgagttgtttttttt-ttcttccttctatcctaattgaataagtgatttcacata 39610279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 36691950 - 36691861
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||          || ||||||||||||||||||||||||||||||||||||    
T  36691950 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagtt---------atttttccttctatcctaattgaataagtgatttcacata 36691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 30156432 - 30156344
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||| |||          | |||||| |||||||||||||||||||||||||||||    
T  30156432 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattg----------ttttccttttatcctaattgaataagtgatttcacata 30156344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 11819061 - 11819150
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||| |||         || ||||||||| | ||||||||||||||||||||||||    
T  11819061 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttg---------tttttccttctaccttaattgaataagtgatttcacata 11819150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 14585440 - 14585529
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||| |||||||||||||||| |||||||||||  | |||         || ||||||||||||||||||||||||||||||||||||    
T  14585440 agaggggtgatttagagtcaattttgacccaaaaatcactcctctaaattg---------tttttccttctatcctaattgaataagtgatttcacata 14585529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 31270302 - 31270393
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||| ||| ||          || |||||||||||||||||||||||||||||||||||    
T  31270302 ttagatgggtgatttagggtcaattttgacccaaaaatcaccccttcgaatta---------tttttccttctatcctaattgaataagtgatttcacat 31270392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 31462897 - 31462808
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||| |||         || |||||| ||||||||||||||||||||||| |||||    
T  31462897 agaggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattg---------tttttccttatatcctaattgaataagtgattttacata 31462808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 48652591 - 48652502
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||||| |||         || ||||||||| | ||||||||||||||||||||||||    
T  48652591 agaggggtgatttagggtcaactttgacccaaaaatcacccctccgatttg---------tttttccttctaccttaattgaataagtgatttcacata 48652502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 48400875 - 48400915
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcac 194  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  48400875 ttagaggggtgatttagggtcaattttgacccaaaaatcac 48400915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 53155583 - 53155543
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcac 194  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  53155583 ttagaggggtgatttagggtcaattttgacccaaaaatcac 53155543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 254
Target Start/End: Complemental strand, 27189546 - 27189456
Alignment:
Q  155 tagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||| ||||||||||| |||| ||| |||| ||||| |||         || ||||||||||||||||||||||||| ||||||||||    
T  27189546 tagaggggtgatttagagtcaattttgatccaaaaattactcttccgaattg---------tttttccttctatcctaattgaataagtaatttcacata 27189456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 35174736 - 35174771
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  35174736 ttccttctatcctaattgaataagtgatttcacata 35174771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 41868391 - 41868356
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  41868391 ttccttctatcctaattgaataagtgatttcacata 41868356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 54239115 - 54239080
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  54239115 ttccttctatcctaattgaataagtgatttcacata 54239080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 1075044 - 1074994
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttg 206  Q
    |||||||||||||| ||||||||||||||||| |||||| | |||||||||    
T  1075044 agaggggtgatttatggtcaattttgacccaaaaatcacccatccgagttg 1074994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 3456921 - 3457010
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| |||||||||||| |||| ||||||  |||||| |||         || |||||||||||||||||||||||||||||| |||||    
T  3456921 agaggggtgatttatggtcaattttgatccaaaaatcacctctccgaattg---------tttttccttctatcctaattgaataagtgatttaacata 3457010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 32080901 - 32080859
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatcactcctccga 202  Q
    |||||||||||||||||||||||||||| |||||| |||||||    
T  32080901 gggtgatttagggtcaattttgacccaaaaatcacccctccga 32080859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 34961009 - 34960920
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||| ||||||||||||||||||||| |||||| |||| || |||         || || ||||||| |||||||||||||||||||||||||    
T  34961009 agaggggtgacttagggtcaattttgacccaaaaatcacccctcagaattg---------ttttttcttctattctaattgaataagtgatttcacata 34960920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 187
Target Start/End: Complemental strand, 13702123 - 13702092
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaa 187  Q
    ||||||||||||||||||||||||||||||||    
T  13702123 agaggggtgatttagggtcaattttgacccaa 13702092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 22484997 - 22485032
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||| ||||    
T  22484997 ttccttctatcctaattgaataagtgatttcgcata 22485032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 193
Target Start/End: Complemental strand, 40884018 - 40883983
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatca 193  Q
    |||||||||||||||||||||||||||||| |||||    
T  40884018 aggggtgatttagggtcaattttgacccaaaaatca 40883983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 49628184 - 49628149
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| |||||||||||||||||||||    
T  49628184 ttccttctatcctagttgaataagtgatttcacata 49628149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 4206664 - 4206616
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccga 202  Q
    |||||||||||||||| |||||||||||| | || |||||| |||||||    
T  4206664 ttagaggggtgatttatggtcaattttgatcaaaaaatcacccctccga 4206616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 40883965 - 40883933
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcac 251  Q
    |||||| ||||||||||||||||||||||||||    
T  40883965 ttccttttatcctaattgaataagtgatttcac 40883933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 5e-25; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 13879157 - 13879060
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  13879157 agagggatgatttagggtcaattttgacccaataatcacccctccgagttgtttttttt-ttcttccttctatcctaattgaataagtgatttcacata 13879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 14019282 - 14019185
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  14019282 agagggatgatttagggtcaattttgacccaataatcacccctccgagttgtttttttt-ttcttccttctatcctaattgaataagtgatttcacata 14019185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 15919850 - 15919941
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    ||||||||||||||||| |||||||||||||||| |||||| |||||||||||         || ||||||||||||||||||||||| |||||||||||    
T  15919850 ttagaggggtgatttagagtcaattttgacccaaaaatcacccctccgagttg---------tttttccttctatcctaattgaataaatgatttcacat 15919940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 27095687 - 27095772
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||         || ||||||||||||||||||||||||||||||||||||    
T  27095687 gggtgatttagggtcaattttgacctaaaaatcacccctccgagttg---------tttttccttctatcctaattgaataagtgatttcacata 27095772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 252
Target Start/End: Complemental strand, 43474273 - 43474184
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcaca 252  Q
    |||||||||||||||||||||||||||||||||| |||||| | ||||| |||         || ||||||||||||||||||||||||||||||||||    
T  43474273 ttagaggggtgatttagggtcaattttgacccaaaaatcacccatccgaattg---------tttttccttctatcctaattgaataagtgatttcaca 43474184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 254
Target Start/End: Original strand, 12704625 - 12704754
Alignment:
Q  116 ctcaaaccctagtcatcacccnnnnnnncttcttcccgttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnnc 215  Q
    |||||||||||||| ||||||       |||||||   |||||||||||||||||||||||||||||||||| |||||| ||| ||| |||             
T  12704625 ctcaaaccctagtcgtcacccttttcttcttcttctttttagaggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattg--------- 12704715  T
Q  216 ttcttccttctatcctaattgaataagtgatttcacata 254  Q
    || |||||| |||||||||||||||||||||||||||||    
T  12704716 tttttccttatatcctaattgaataagtgatttcacata 12704754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 32015195 - 32015248
Alignment:
Q  153 gttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttg 206  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  32015195 gttagaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttg 32015248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 18089537 - 18089446
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||| |||         || || ||| ||||||||||||||||||||||||||||    
T  18089537 ttagaggggtgatttagggtcaattttgatccaaaaatcactcctccgaattg---------ttttttcttatatcctaattgaataagtgatttcacat 18089447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 11938002 - 11937912
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttcc-ttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||| |||         || |||| ||||||||||||||||||||||||||||||||    
T  11938002 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattg---------tttttcctttctatcctaattgaataagtgatttcacata 11937912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 17268267 - 17268178
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| ||||||||||||||||| |||||  ||| |||||||         || ||||||||||||||||||||||||||||||||||||    
T  17268267 agaggggtgatttatggtcaattttgacccaaaaatcatcccttcgagttg---------tttttccttctatcctaattgaataagtgatttcacata 17268178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 22597113 - 22597202
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||         || ||||||||||||||||| ||||||||||||||||||    
T  22597113 agaggggtgatttaaggtcaattttgacccaaaaatcatccctccgagttg---------tttttccttctatcctaattaaataagtgatttcacata 22597202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 25067818 - 25067919
Alignment:
Q  144 cttcttcccgttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagt 243  Q
    |||||||  ||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||         || ||||||||||  |||||||||||||    
T  25067818 cttcttcttgttagagaggtgatttagggtcaattttgacccaaaaatcacccctccgatttg---------tttttccttctattttaattgaataagt 25067908  T
Q  244 gatttcacata 254  Q
    |||||||||||    
T  25067909 gatttcacata 25067919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 33012059 - 33012144
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||| |||||||| ||||| |||         || |||||||||| |||||||||||||||||||||||||    
T  33012059 gggtgatttagggtcaattttgacccaaaaatcactcatccgaattg---------tttttccttctattctaattgaataagtgatttcacata 33012144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 44942267 - 44942352
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||         || || |||||||||||||||||||||||||||||||||    
T  44942267 gggtgatttatggtcaattttgacccaaaaatcacccctccgagttg---------ttttttcttctatcctaattgaataagtgatttcacata 44942352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 5754264 - 5754355
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||| |||         || |||||||||||||| |||||||| |||||||||||    
T  5754264 ttagaggggtgatttagggtcaattttgacccaaaaatcatccctccgaattg---------tttttccttctatcctagttgaataaatgatttcacat 5754354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 20561275 - 20561229
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccga 202  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||    
T  20561275 agaggggtgatttagggtcaattttgacccaaaaatcacccctccga 20561229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 12891232 - 12891188
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctcc 200  Q
    |||||||||||||||||||||||||||||||| |||||| |||||    
T  12891232 agaggggtgatttagggtcaattttgacccaaaaatcacccctcc 12891188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 38384588 - 38384497
Alignment:
Q  153 gttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcaca 252  Q
    |||||||||||||||| |||||||||||||||||| ||||||  |||||| |||         || |||||| || ||||||||||||||||||||||||    
T  38384588 gttagaggggtgattttgggtcaattttgacccaaaaatcacatctccgatttg---------tttttccttataccctaattgaataagtgatttcaca 38384498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 4732103 - 4732138
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  4732103 ttccttctatcctaattgaataagtgatttcacata 4732138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 4604446 - 4604361
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||| ||||||||||||||||| ||| |||| | |||||||         || |||||||||| |||||||||||||||||||||||||    
T  4604446 gggtgatttaaggtcaattttgacccaaaaattactcattcgagttg---------tttttccttctattctaattgaataagtgatttcacata 4604361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 9690116 - 9690027
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| |||||| |||||||||| |||||| |||||||  ||         || |||||||||||||||||||||||||||| |||||||    
T  9690116 agaggggtgatttaaggtcaaatttgacccaaaaatcacccctccgaactg---------tttttccttctatcctaattgaataagtgatctcacata 9690027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 28262032 - 28261990
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatcactcctccga 202  Q
    |||||||||||||||||||||||||||| |||||||| |||||    
T  28262032 gggtgatttagggtcaattttgacccaaaaatcactcatccga 28261990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 7073091 - 7073055
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatc 192  Q
    |||||||||||||||||||||||||||||||| ||||    
T  7073091 agaggggtgatttagggtcaattttgacccaaaaatc 7073055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 36867985 - 36868029
Alignment:
Q  155 tagaggggtgatttagggtcaattttgacccaataatcactcctc 199  Q
    ||||||||||||||||||||||||||||| ||| |||||| ||||    
T  36867985 tagaggggtgatttagggtcaattttgactcaaaaatcacccctc 36868029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 4426747 - 4426712
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||| ||||||||||||    
T  4426747 ttccttctatcctaattgaataaatgatttcacata 4426712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 250
Target Start/End: Complemental strand, 13740749 - 13740718
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttca 250  Q
    ||||||||||||||||||||||||||||||||    
T  13740749 ttccttctatcctaattgaataagtgatttca 13740718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 34416850 - 34416815
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||| |||||||||||||||||||||||||||||    
T  34416850 ttccttatatcctaattgaataagtgatttcacata 34416815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 35333537 - 35333572
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||| ||||||||||||||||||||||||||||||    
T  35333537 ttcctgctatcctaattgaataagtgatttcacata 35333572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 38535394 - 38535359
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||| ||||||||||||||||||||||||    
T  38535394 ttccttctatcataattgaataagtgatttcacata 38535359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 187
Target Start/End: Complemental strand, 38535448 - 38535417
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaa 187  Q
    ||||||||||||||||||||||||||||||||    
T  38535448 agaggggtgatttagggtcaattttgacccaa 38535417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 9978812 - 9978774
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcac 194  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  9978812 agaggggtgatttaaggtcaattttgacccaaaaatcac 9978774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 253
Target Start/End: Complemental strand, 34963155 - 34963121
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacat 253  Q
    ||||||||| |||||||||||||||||||||||||    
T  34963155 ttccttctaccctaattgaataagtgatttcacat 34963121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 41797593 - 41797643
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttg 206  Q
    |||||||||||||||||| |||||||||| || |||||| |||| ||||||    
T  41797593 agaggggtgatttagggttaattttgacctaaaaatcacccctcagagttg 41797643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 254
Target Start/End: Complemental strand, 10287088 - 10287060
Alignment:
Q  226 tatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||    
T  10287088 tatcctaattgaataagtgatttcacata 10287060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 199
Target Start/End: Complemental strand, 15674100 - 15674057
Alignment:
Q  156 agaggggtgatttagggtcaa-ttttgacccaataatcactcctc 199  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  15674100 agaggggtgatttagggtcaatttttgacccaa-aatcactcctc 15674057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 32314477 - 32314509
Alignment:
Q  222 cttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||| ||||||||||||    
T  32314477 cttctatcctaattgaataaatgatttcacata 32314509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 6115 - 6204
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||         || ||||||||||||||||||||||||||||||||||||    
T  6115 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttg---------tttttccttctatcctaattgaataagtgatttcacata 6204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 17096385 - 17096293
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||         || ||||||||||||||||||||||||||||||||||||    
T  17096385 agaggggtgatttagggtcaattttgacccaataatcacccctcccagttgttt------tttttccttctatcctaattgaataagtgatttcacata 17096293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 17331306 - 17331395
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||| |||         || ||||||||||| ||||||||||||||||||||||||    
T  17331306 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttg---------tttttccttctatcttaattgaataagtgatttcacata 17331395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 32347858 - 32347768
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||||| |||         || ||||||||||||||||||||||||||||||||||||    
T  32347858 agaggggtgatttagggtcaactttgacccaaaaatcacccctccgacttgt--------tttttccttctatcctaattgaataagtgatttcacata 32347768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 17699537 - 17699619
Alignment:
Q  162 gtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||         || |||||||||||||||||||||||||||||||||||    
T  17699537 gtgatttagggtcaattttgacccaaaaatcacccctccgaattg---------tttttccttctatcctaattgaataagtgatttcacat 17699619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 7771951 - 7771903
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccga 202  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  7771951 ttagaggggtgatttagggtcaattttgacccaaaaatcacccctccga 7771903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 43493848 - 43493939
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    ||||||||||||||||||||||||||||| |||| ||||||  |||||| |||         || |||||||||| ||||||||||||||||||||||||    
T  43493848 ttagaggggtgatttagggtcaattttgatccaaaaatcacctctccgaattg---------tttttccttctattctaattgaataagtgatttcacat 43493938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 33164611 - 33164522
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| ||||||||||||| ||| |||||||||||||| |||         || ||||||||| | ||||||||||||||||||||||||    
T  33164611 agaggggtgatttatggtcaattttgactcaaaaatcactcctccgaattg---------tttttccttctaccttaattgaataagtgatttcacata 33164522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 254
Target Start/End: Original strand, 42609127 - 42609211
Alignment:
Q  161 ggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||| || |||||||| ||||| |||         || || |||||||||||||||||||||||||||||||||    
T  42609127 ggtgatttagggtcaattttgacctaaaaatcactcatccgaattg---------ttttttcttctatcctaattgaataagtgatttcacata 42609211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 981170 - 981118
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttg 206  Q
    ||||| |||||||||||| |||||||||||||||||||| | |||||||||||    
T  981170 ttagaagggtgatttaggatcaattttgacccaataatcgcccctccgagttg 981118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 29097769 - 29097856
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||| |||         || ||||||||| | ||||||||||||||||||||||||    
T  29097769 aggggtgatttagggtcaattttgacccaaagatcacccctccgatttg---------tttttccttctaccttaattgaataagtgatttcacata 29097856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 3740389 - 3740424
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  3740389 ttccttctatcctaattgaataagtgatttcacata 3740424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 28040607 - 28040696
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||| | | |         || |||||| |||||||||||||||||||||||||||||    
T  28040607 agaggggtgatttacggtcaattttgacccaaaaatcacccctccaaatcg---------tttttccttatatcctaattgaataagtgatttcacata 28040696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 6281020 - 6281065
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctc 199  Q
    |||||||||||||||| ||||||||||||||||| |||||| ||||    
T  6281020 ttagaggggtgatttatggtcaattttgacccaaaaatcacccctc 6281065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 26295203 - 26295155
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccga 202  Q
    |||||| |||||||||||||||||||||| |||| |||||| |||||||    
T  26295203 ttagagaggtgatttagggtcaattttgatccaaaaatcacccctccga 26295155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 27241040 - 27241131
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    ||||| |||||||||| | ||||||||||||||| |||||| |||| || |||         || |||||| ||||||||||||||||||||||||||||    
T  27241040 ttagatgggtgatttatgatcaattttgacccaaaaatcacccctctgaattg---------tttttccttttatcctaattgaataagtgatttcacat 27241130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 178195 - 178160
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||| |||||||||||||||||||||||||||||    
T  178195 ttccttatatcctaattgaataagtgatttcacata 178160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 6635282 - 6635317
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||| ||||||||||||||||||||||||    
T  6635282 ttccttctatcataattgaataagtgatttcacata 6635317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 12891708 - 12891743
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||| |||||||||||||||||||||||||||||    
T  12891708 ttccttttatcctaattgaataagtgatttcacata 12891743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 39179917 - 39179882
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||| |||||||||||||||||||||||||    
T  39179917 ttccttctattctaattgaataagtgatttcacata 39179882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 39531492 - 39531457
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39531492 ttccttctatcgtaattgaataagtgatttcacata 39531457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 20483165 - 20483202
Alignment:
Q  157 gaggggtgatttagggtcaattttgacccaataatcac 194  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  20483165 gaggggtgatttaggatcaattttgacccaaaaatcac 20483202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 24825615 - 24825716
Alignment:
Q  144 cttcttcccgttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagt 243  Q
    |||||||  ||||||||||||||||||| |||||||||||| || ||||||||||||||||||         || |||||||||||||||||||||||||    
T  24825615 cttcttcttgttagaggggtgatttaggatcaattttgacctaaaaatcactcctccgagttg---------tttttccttctatcctaattgaataagt 24825705  T
Q  244 gatttcacata 254  Q
    |||||||||||    
T  24825706 gatttcacata 24825716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 43244526 - 43244435
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| || |||         || |||||||||||||||||||||||||||||||||||    
T  43244526 ttagaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattg---------tttttccttctatcctaattgaataagtgatttcacat 43244436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 95 - 254
Target Start/End: Original strand, 29922751 - 29922904
Alignment:
Q  95 agttctctctttacacgtctactcaaaccctagtcatcacccnnnnnnncttcttcccgttagaggggtgatttagggtcaattttgacccaataatcac 194  Q
    |||||||||||| | | ||| |||||||||||| | ||||||       |||||||  || |||| |||||||||||||||||||||||| |||||||||    
T  29922751 agttctctcttttctcttcttctcaaaccctagccgtcacccctttcttcttcttcttgtcagagaggtgatttagggtcaattttgacctaataatcac 29922850  T
Q  195 tcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
     ||||| |||||         || ||| ||||||||||||||||||||||||||||||||    
T  29922851 ccctccaagttgttt------tttttctttctatcctaattgaataagtgatttcacata 29922904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 394416 - 394329
Alignment:
Q  157 gaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| |||         || ||||||||||||||||| |||||||||||||||||    
T  394416 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattg---------tttttccttctatcctaattcaataagtgatttcacat 394329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 31521962 - 31522049
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||| || |||||| ||||||| |||         || ||||||||||||||||||||||||||||||||||||    
T  31521962 aggggtgatttagggtcaattttgacctaaaaatcacccctccgaattg---------tttttccttctatcctaattgaataagtgatttcacata 31522049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 7060302 - 7060391
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||| |||||||||||||||| |||||| |||||| ||||||| |||         || ||||||||||||||||||||||||||||||||||||    
T  7060302 agaggggtaatttagggtcaattttaacccaaaaatcacccctccgaattg---------tttttccttctatcctaattgaataagtgatttcacata 7060391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 22757072 - 22757161
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||| ||| ||||||  |||||| |||         || ||||||||||||||||||||||||||||||||||||    
T  22757072 agaggggtgatttagggtcaattttgactcaaaaatcaccactccgaattg---------tttttccttctatcctaattgaataagtgatttcacata 22757161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 29268920 - 29268831
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| ||||||||||||||| | |||||| |||||||||||         || |||||| |||||||||||||||||||||||||||||    
T  29268920 agaggggtgatttaaggtcaattttgaccctaaaatcacccctccgagttg---------tttttccttttatcctaattgaataagtgatttcacata 29268831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 44757185 - 44757096
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| ||||||||||||||||| |||||| | | |||||||         || ||||||||||||||||||||||||||||||||||||    
T  44757185 agaggggtgatttaaggtcaattttgacccaaaaatcacccattcgagttg---------tttttccttctatcctaattgaataagtgatttcacata 44757096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 13965545 - 13965627
Alignment:
Q  163 tgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||| |||||| ||| ||| |||         || ||||||||||||||||||||||||||||||||||||    
T  13965545 tgatttagggtcaattttgacccaaaaatcaccccttcgaattg---------tttttccttctatcctaattgaataagtgatttcacata 13965627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 6911646 - 6911747
Alignment:
Q  144 cttcttcccgttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagt 243  Q
    |||||||  |||||||||||||||||||||||||||||| |||| ||||||  |||||| |||         || ||||||||| | |||||||||||||    
T  6911646 cttcttcttgttagaggggtgatttagggtcaattttgatccaaaaatcacctctccgatttg---------tttttccttctaccttaattgaataagt 6911736  T
Q  244 gatttcacata 254  Q
    |||||||||||    
T  6911737 gatttcacata 6911747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 51152105 - 51152192
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||| ||||||| ||||||||| |||||| ||||||| |||         || ||||||||||||||||| ||||||||||||||||||    
T  51152105 aggggtgatttanggtcaatattgacccaaaaatcacccctccgaattg---------tttttccttctatcctaatttaataagtgatttcacata 51152192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 24568856 - 24568767
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||| ||||||||||||| |||||| | ||||| ||          || |||||||||||||||||||||||||||||| |||||    
T  24568856 agaggggtgatttagggtgaattttgacccaaaaatcacccttccgaatta---------tttttccttctatcctaattgaataagtgattttacata 24568767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 199
Target Start/End: Original strand, 8712510 - 8712551
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatcactcctc 199  Q
    |||||||||||||||||||||||||||||| |||||| ||||    
T  8712510 aggggtgatttagggtcaattttgacccaaaaatcacccctc 8712551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 24611886 - 24611853
Alignment:
Q  221 ccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||||||    
T  24611886 ccttctatcctaattgaataagtgatttcacata 24611853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 478156 - 478116
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcac 194  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  478156 ttagaggggtgatttatggtcaattttgacccaaaaatcac 478116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 24100115 - 24100206
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    |||||||||||||||||| |||||||||| |||| ||| || | ||||| |||         || ||||||||||| |||||||||||||||||||||||    
T  24100115 ttagaggggtgatttaggatcaattttgaaccaaaaattacccatccgaattg---------tttttccttctatcgtaattgaataagtgatttcacat 24100205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 26742608 - 26742517
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    ||||| |||||||||||| ||||||||||||||| |||||| | ||||| |||         || ||| ||||||| |||||||||||||||||||||||    
T  26742608 ttagatgggtgatttaggatcaattttgacccaaaaatcacccatccgaattg---------tttttctttctatcttaattgaataagtgatttcacat 26742518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 27394810 - 27394846
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatcac 194  Q
    |||||||||||||||||||||||||||||| ||||||    
T  27394810 aggggtgatttagggtcaattttgacccaaaaatcac 27394846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 254
Target Start/End: Original strand, 2447836 - 2447867
Alignment:
Q  223 ttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||||    
T  2447836 ttctatcctaattgaataagtgatttcacata 2447867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 6881988 - 6882023
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||| ||||||||||||||||||    
T  6881988 ttccttctatcctaattaaataagtgatttcacata 6882023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 7083905 - 7083870
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||| ||||||||||||||||||||||||    
T  7083905 ttccttctatcataattgaataagtgatttcacata 7083870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 7861294 - 7861259
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||| ||||||||||||||||||    
T  7861294 ttccttctatcctaattaaataagtgatttcacata 7861259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 254
Target Start/End: Complemental strand, 8517549 - 8517510
Alignment:
Q  215 cttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  8517549 cttcttccttctattctaattgaataagtgattttacata 8517510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 11210457 - 11210410
Alignment:
Q  155 tagaggggtgatttagggtcaattttgacccaataatcactcctccga 202  Q
    ||||||||||||||||||||||||||| || || |||||| |||||||    
T  11210457 tagaggggtgatttagggtcaattttgccctaaaaatcacccctccga 11210410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 26674404 - 26674439
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26674404 ttccttctatcataattgaataagtgatttcacata 26674439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 39523394 - 39523433
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatca 193  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  39523394 ttagaggggtgatttagagtcaattttgacccaaaaatca 39523433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 43493376 - 43493341
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||| ||||||||||||||||||||||||    
T  43493376 ttccttctatcttaattgaataagtgatttcacata 43493341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 50801249 - 50801284
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||| |||||||||||||||||||||||||||||    
T  50801249 ttccttttatcctaattgaataagtgatttcacata 50801284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 249
Target Start/End: Complemental strand, 22049494 - 22049464
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttc 249  Q
    |||||||||||||||||||||||||||||||    
T  22049494 ttccttctatcctaattgaataagtgatttc 22049464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 253
Target Start/End: Original strand, 39523441 - 39523475
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacat 253  Q
    |||||| ||||||||||||||||||||||||||||    
T  39523441 ttccttttatcctaattgaataagtgatttcacat 39523475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 39837572 - 39837662
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||| |||||||||||||||| |||||| ||| ||| ||          || | |||| |||||||||||||||||||||||||||||    
T  39837572 agaggggtgatttagcgtcaattttgacccaaaaatcaccccttcgattttt--------ttttcccttttatcctaattgaataagtgatttcacata 39837662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 24611944 - 24611899
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctc 199  Q
    |||||||||||||||| ||||||||| ||||||| |||||| ||||    
T  24611944 ttagaggggtgatttatggtcaatttagacccaaaaatcacccctc 24611899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 19745369 - 19745413
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatcactcctccga 202  Q
    |||||||||||||| ||||||||||||||| ||||| || |||||    
T  19745369 aggggtgatttaggatcaattttgacccaaaaatcattcatccga 19745413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 19794437 - 19794393
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatcactcctccga 202  Q
    |||||||||||||| ||||||||||||||| ||||| || |||||    
T  19794437 aggggtgatttaggatcaattttgacccaaaaatcattcatccga 19794393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 250
Target Start/End: Complemental strand, 20399989 - 20399961
Alignment:
Q  222 cttctatcctaattgaataagtgatttca 250  Q
    |||||||||||||||||||||||||||||    
T  20399989 cttctatcctaattgaataagtgatttca 20399961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 20400048 - 20400008
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcac 194  Q
    ||||| ||| |||||||||||||||||||||||| ||||||    
T  20400048 ttagaagggcgatttagggtcaattttgacccaaaaatcac 20400008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 25658143 - 25658183
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcac 194  Q
    |||||||||||||||||||| ||||||||| ||| ||||||    
T  25658143 ttagaggggtgatttagggttaattttgactcaaaaatcac 25658183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 424434 - 424345
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||         || ||||||||||||||||||||||||||||||||||||    
T  424434 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttg---------tttttccttctatcctaattgaataagtgatttcacata 424345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 7995703 - 7995614
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||| |||         || ||||||||||||||||||||||||||||||||||||    
T  7995703 agaggggtgatttagggtcaattttgacccaaaaatcacctctccgaattg---------tttttccttctatcctaattgaataagtgatttcacata 7995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 28678275 - 28678184
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||| |||         || ||| ||||||| |||||||||||||||||||||||    
T  28678275 ttagaggggtgatttagggtcaattttgacccaaaaatcactcgtccgaattg---------tttttcgttctatcataattgaataagtgatttcacat 28678185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 32784088 - 32784175
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| |||         || ||||||||||||| ||||||||||||||||||||||    
T  32784088 aggggtgatttagggtcaattttgacccaaaaatcacccctccgaattg---------tttttccttctatccttattgaataagtgatttcacata 32784175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 12871599 - 12871649
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttg 206  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  12871599 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttg 12871649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 33487173 - 33487088
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttca 250  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||| |||         || |||||||||||||||||||||| |||||||||    
T  33487173 agaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattg---------tttttccttctatcctaattgaatatgtgatttca 33487088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 45193769 - 45193680
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||| ||||||||||||||||| |||||||||| || |||||||||||         || ||||||||||||||||||||||||||||||||||||    
T  45193769 agaggggcgatttagggtcaattttaacccaataat-acccctccgagttgt--------tttttccttctatcctaattgaataagtgatttcacata 45193680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 33939147 - 33939102
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctc 199  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  33939147 ttagaggggtgatttagggtcaattttgacccaaaaatcacccctc 33939102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 37822434 - 37822399
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  37822434 ttccttctatcctaattgaataagtgatttcacata 37822399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 3232770 - 3232855
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||| | || |||||| ||||||| |||         || ||||||||||||||||||||||| ||||||||||||    
T  3232770 gggtgatttagggtcaattttgatcaaaaaatcacccctccgaattg---------tttttccttctatcctaattgaataaatgatttcacata 3232855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 14265266 - 14265351
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||  || |||||| |||||||| ||         || ||||||||||||||||| ||||||||||||||||||    
T  14265266 gggtgatttagggtcaattttgacaaaaaaatcacccctccgagctg---------tttttccttctatcctaattaaataagtgatttcacata 14265351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 27534677 - 27534766
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||| ||||||||||||||||||||||||| |||||  ||||||| |||         || ||||||||| | ||||||||||||||||||||||||    
T  27534677 agagggatgatttagggtcaattttgacccaaaaatcatccctccgatttg---------tttttccttctaccttaattgaataagtgatttcacata 27534766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 29205261 - 29205301
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcac 194  Q
    ||||| |||||||||||||||||||||||||||| ||||||    
T  29205261 ttagacgggtgatttagggtcaattttgacccaaaaatcac 29205301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 44517179 - 44517214
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||| ||||||||||||||||||    
T  44517179 ttccttctatcctaattcaataagtgatttcacata 44517214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 18343592 - 18343630
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcac 194  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  18343592 agaggggtgatttaggatcaattttgacccaaaaatcac 18343630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 15791630 - 15791581
Alignment:
Q  157 gaggggtgatttagggtcaattttgacccaataatcactcctccgagttg 206  Q
    ||||| ||||||||| ||||||||||| ||| |||||||| |||||||||    
T  15791630 gagggctgatttaggatcaattttgacacaaaaatcactcatccgagttg 15791581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 45750456 - 45750493
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatca 193  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  45750456 agaggggtgatttaaggtcaattttgacccaaaaatca 45750493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 254
Target Start/End: Complemental strand, 4882441 - 4882413
Alignment:
Q  226 tatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||    
T  4882441 tatcctaattgaataagtgatttcacata 4882413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 20411549 - 20411589
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcac 194  Q
    ||||| |||||||||| ||||||||||||||||| ||||||    
T  20411549 ttagatgggtgatttatggtcaattttgacccaaaaatcac 20411589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 3266360 - 3266455
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| |||||||||||| ||||||||||  |||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  3266360 agaggggtgatttatggtcaattttgatccaataatcatccctccgagttgtttttt---ttcttccttctatcctaattgaataagtgatttcacata 3266455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 45457701 - 45457610
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||| |||         || ||||||||||| |||||||||||||||||||||||    
T  45457701 ttagaggggtgatttagggtcaattttgacgcaaaaatcactcctccgaattg---------tttttccttctatcttaattgaataagtgatttcacat 45457611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 28665051 - 28664966
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||| | |||||| |||||||||||         || ||||||||||||||||||||||||||||||||||||    
T  28665051 gggtgatttagggtcaattttgaccctaaaatcacccctccgagttg---------tttttccttctatcctaattgaataagtgatttcacata 28664966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 41287933 - 41288025
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||           || |||||||||||||||||||||| ||||||||||||    
T  41287933 ttagaggggtgatttagggtcaattttgacccaataatcacccatccgagt--------gattttttccttctatcctaattgaataggtgatttcacat 41288024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 22747648 - 22747562
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||| |||||| ||||| |||||          | |||||||||||||||||||||||||||||| |||||    
T  22747648 aggggtgatttagggtcaattttgacccaaaaatcacccctccaagttg----------ttttccttctatcctaattgaataagtgatttgacata 22747562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 9785297 - 9785384
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||| |||         || ||||||||||| ||||||||||||||||||||||||    
T  9785297 aggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattg---------tttttccttctatcttaattgaataagtgatttcacata 9785384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 17473863 - 17473777
Alignment:
Q  159 ggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||| || |||||| ||||||| |||         || |||||| |||||||||||||||||||||||||||||    
T  17473863 ggggtgatttagggtcaattttgaccaaaaaatcacccctccgaattg---------tttttccttttatcctaattgaataagtgatttcacata 17473777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 17579351 - 17579437
Alignment:
Q  159 ggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||| || |||||| ||||||| |||         || |||||| |||||||||||||||||||||||||||||    
T  17579351 ggggtgatttagggtcaattttgaccaaaaaatcacccctccgaattg---------tttttccttttatcctaattgaataagtgatttcacata 17579437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 21990639 - 21990729
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||  || |||||| ||||||| |||         || ||||| ||||||||||||||||||||||||||||||    
T  21990639 agaggggtgatttagggtcaattttgactgaaaaatcacccctccgaattgt--------tttttcctgctatcctaattgaataagtgatttcacata 21990729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 45482042 - 45482131
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||| |||||||||||||||||||||||| | |||||| |||||||| ||         || ||||||||||||||||| ||||||||||||||||||    
T  45482042 agaggagtgatttagggtcaattttgaccccaaaatcacccctccgagctg---------tttttccttctatcctaattaaataagtgatttcacata 45482131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 46026172 - 46026083
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||||| |||||| | ||||| |||         || ||||||||||||||||||||||||| |||| |||||    
T  46026172 agaggggtgatttagggtcaattttgacccaaaaatcacacatccgaattg---------tttttccttctatcctaattgaataagttatttaacata 46026083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 48304538 - 48304453
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttca 250  Q
    |||||||||||||||||||||||||||||||| |||||| | ||||| |||        ||| ||||| ||||||||||||||||||||||||||    
T  48304538 agaggggtgatttagggtcaattttgacccaaaaatcacccatccgaattg--------ctt-ttcctgctatcctaattgaataagtgatttca 48304453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 5684345 - 5684432
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||| ||| ||||||  |||||| |||         || ||| ||||||||||||||||||||||||||||||||    
T  5684345 aggggtgatttagggtcaattttgacgcaaaaatcacctctccgaattg---------tttttcattctatcctaattgaataagtgatttcacata 5684432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 5709395 - 5709482
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||| ||| ||||||  |||||| |||         || ||| ||||||||||||||||||||||||||||||||    
T  5709395 aggggtgatttagggtcaattttgacgcaaaaatcacctctccgaattg---------tttttcattctatcctaattgaataagtgatttcacata 5709482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 21603439 - 21603529
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    ||||||||||||||||||||||||||||||| || || ||| |||| || |||         || |||||||||||||||||||||||||||||||||||    
T  21603439 ttagaggggtgatttagggtcaattttgaccaaa-aagcacccctctgaattg---------tttttccttctatcctaattgaataagtgatttcacat 21603528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 32740785 - 32740820
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  32740785 ttccttctatcctaattgaataagtgatttcacata 32740820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 42644708 - 42644743
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  42644708 ttccttctatcctaattgaataagtgatttcacata 42644743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 24988497 - 24988448
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttg 206  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||||||||    
T  24988497 agaggggtgattcagggtcaattttgacccaa-aatcacccctccgagttg 24988448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 36579455 - 36579366
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||| ||||||||||||||||||||||| | |||||| ||||||| |||         || |||||||||||||| |||||||||||||| ||||||    
T  36579455 agagggatgatttagggtcaattttgacccgaaaatcacccctccgaattg---------tttttccttctatcctagttgaataagtgattccacata 36579366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 40761567 - 40761613
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccga 202  Q
    |||||| ||||||||||||||||||||||||| |||||| |||||||    
T  40761567 agagggatgatttagggtcaattttgacccaaaaatcacccctccga 40761613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 6667371 - 6667411
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcac 194  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  6667371 ttagaggagtgatttagggtcaattttgacccaaaaatcac 6667411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 10574357 - 10574405
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccga 202  Q
    ||||| |||||||||||||||||||||||| ||| |||||| |||||||    
T  10574357 ttagatgggtgatttagggtcaattttgactcaaaaatcacccctccga 10574405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 42603914 - 42603823
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    |||||| ||||||||| ||||||||||||| ||| |||||| ||||||| |||         || ||| ||||||| |||||||||||||||||||||||    
T  42603914 ttagagcggtgatttatggtcaattttgactcaaaaatcacccctccgaattg---------tttttcattctatcataattgaataagtgatttcacat 42603824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 10094473 - 10094508
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||| |||||||||||||||||||||||||||||    
T  10094473 ttccttttatcctaattgaataagtgatttcacata 10094508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 11833051 - 11833086
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||| |||||||||||||||||||||||||||    
T  11833051 ttccttctttcctaattgaataagtgatttcacata 11833086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 15674701 - 15674666
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||| ||||||||||||||||||||||||||||||    
T  15674701 ttcctcctatcctaattgaataagtgatttcacata 15674666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 17509293 - 17509258
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||| |||||||||||||||||||||||||||||    
T  17509293 ttccttttatcctaattgaataagtgatttcacata 17509258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 17543921 - 17543956
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||| |||||||||||||||||||||||||||||    
T  17543921 ttccttttatcctaattgaataagtgatttcacata 17543956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 39533064 - 39533029
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39533064 ttccttctatcttaattgaataagtgatttcacata 39533029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 21954957 - 21954912
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatcactcctccgagttg 206  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||    
T  21954957 gggtgatttagggtcaattttaacccaa-aatcactcatccgagttg 21954912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 36719680 - 36719638
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatcactcctccga 202  Q
    ||||||||||||||||||||||| |||| |||||| |||||||    
T  36719680 gggtgatttagggtcaattttgatccaaaaatcacccctccga 36719638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 39533114 - 39533081
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatca 193  Q
    |||||||||||||||||||||||||||| |||||    
T  39533114 gggtgatttagggtcaattttgacccaaaaatca 39533081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 15674768 - 15674740
Alignment:
Q  156 agaggggtgatttagggtcaattttgacc 184  Q
    |||||||||||||||||||||||||||||    
T  15674768 agaggggtgatttagggtcaattttgacc 15674740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 42644654 - 42644694
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactc 196  Q
    |||||||||||||||| ||||||||||| ||| ||||||||    
T  42644654 agaggggtgatttaggatcaattttgactcaaaaatcactc 42644694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 254
Target Start/End: Original strand, 43847109 - 43847137
Alignment:
Q  226 tatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||    
T  43847109 tatcctaattgaataagtgatttcacata 43847137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 7e-18; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 6420001 - 6419912
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||| |||| |||||| |||| ||||||         || ||||||||||||||||||||||||||||||||||||    
T  6420001 agaggggtgatttagggtcaattttgatccaaaaatcacccctctgagttg---------tttttccttctatcctaattgaataagtgatttcacata 6419912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 14783316 - 14783225
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    |||||||| ||||||||||||||||||||||||| |||||| ||||||| |||         || |||||||||||||| ||||||||||||||||||||    
T  14783316 ttagagggctgatttagggtcaattttgacccaaaaatcacgcctccgaattg---------tttttccttctatcctagttgaataagtgatttcacat 14783226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 15590222 - 15590133
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||||||||||||||||| |||||| |||| || |||         || || |||||||||||||||||||||||||||||||||    
T  15590222 agaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattg---------ttttttcttctatcctaattgaataagtgatttcacata 15590133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 21507953 - 21507862
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacat 253  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||| | |||         || |||||||||||||| ||||||||||||||||||||    
T  21507953 ttagaggggtgatttagggtcaattttgacccaaacatcacccctccaaattg---------tttttccttctatcctagttgaataagtgatttcacat 21507863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 4922037 - 4921935
Alignment:
Q  144 cttcttcccgttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagt 243  Q
    ||||||| ||||| |||||||||||||||||||||||||||||| ||| || ||||| ||| |         || ||||||||||| |||||||||||||    
T  4922037 cttcttctcgttaaaggggtgatttagggtcaattttgacccaaaaat-acccctcccagtagtt-------tttttccttctatcttaattgaataagt 4921946  T
Q  244 gatttcacata 254  Q
    |||||||||||    
T  4921945 gatttcacata 4921935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 12481513 - 12481424
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||||| |||         || ||||||||| | ||||||||||||||||||||||||    
T  12481513 agaggggtgatttaggatcaattttgacccaaaaatcacccctccgatttg---------tttttccttctaccttaattgaataagtgatttcacata 12481424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 31937557 - 31937473
Alignment:
Q  160 gggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||| ||||||||||| |||||| ||||||| |||          | || |||||||||||||||||||||||||||||||||    
T  31937557 gggtgatttagggtcagttttgacccaaaaatcacccctccgaattg----------tttttcttctatcctaattgaataagtgatttcacata 31937473  T

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Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 8693805 - 8693711
Alignment:
Q  154 ttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttcta---tcctaattgaataagtgatttca 250  Q
    |||||||||||||||| ||||||||||||||||| |||||| | ||||| |||         || |||||||||   |||||||||||||||||||||||    
T  8693805 ttagaggggtgatttaaggtcaattttgacccaaaaatcacccatccgaattg---------tttttccttctatcctcctaattgaataagtgatttca 8693715  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 35220045 - 35219996
Alignment:
Q  157 gaggggtgatttagggtcaattttgacccaataatcactcctccgagttg 206  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||| |||||    
T  35220045 gaggggtgatttagggtcaattttgactcaaaaatcacccctccaagttg 35219996  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 29927516 - 29927472
Alignment:
Q  162 gtgatttagggtcaattttgacccaataatcactcctccgagttg 206  Q
    |||||||| ||||||||||||||||| |||||||||||| |||||    
T  29927516 gtgatttatggtcaattttgacccaaaaatcactcctccaagttg 29927472  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 23654228 - 23654266
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcac 194  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  23654228 agagaggtgatttagggtcaattttgacccaaaaatcac 23654266  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 2304956 - 2304903
Alignment:
Q  153 gttagaggggtgatttagggtcaattttgacccaataatcactcctccgagttg 206  Q
    ||||||||||||||||||| || |||||||||||| |||||  |||| ||||||    
T  2304956 gttagaggggtgatttaggatcgattttgacccaaaaatcaaccctctgagttg 2304903  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 4084996 - 4085033
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatca 193  Q
    ||||||||||||||||||||||||||||| || |||||    
T  4084996 agaggggtgatttagggtcaattttgaccgaaaaatca 4085033  T

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Target: scaffold0155 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 254
Target Start/End: Original strand, 35065 - 35149
Alignment:
Q  161 ggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||| |||||| | |||||||||         || ||||||||||||||||||||||||||||||||||||    
T  35065 ggtgatttagggtcaattttgacccaaaaatcacccatccgagttg---------tttttccttctatcctaattgaataagtgatttcacata 35149  T

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Target: scaffold1379 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 1229 - 1140
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||| ||||||||||||||||| |||||| ||| ||| |||         || ||||||||| ||||||||||||||||||||||||||    
T  1229 agaggggtgatttaaggtcaattttgacccaaaaatcacccctgcgaattg---------tttttccttctaccctaattgaataagtgatttcacata 1140  T

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Target: scaffold1379; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 7 - 42
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||| ||||||||||||||||||||||||    
T  7 ttccttctatcttaattgaataagtgatttcacata 42  T

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Target: scaffold0294 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 4202 - 4121
Alignment:
Q  163 tgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||| ||| ||||||||||  ||||||          ||||||||||||||||||| ||||||||||||||||||    
T  4202 tgatttagggtcaattttgacacaaaaatcactcctttgagttg----------tcttccttctatcctaattaaataagtgatttcacata 4121  T

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Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 74196 - 74231
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  74196 ttccttctatcctaattgaataagtgatttcacata 74231  T

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Target: scaffold0432 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 2557 - 2471
Alignment:
Q  158 aggggtgatttagggtcaattttgacccaataatcactcctccgagttgnnnnnnnncttcttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||||||||||||||| ||||||||||| |||||| |||| ||||||         || ||||||||||| |||| |||||||||||||||||||    
T  2557 aggggtgatttagggtcatttttgacccaaaaatcac-cctctgagttg---------tttttccttctatcataatcgaataagtgatttcacata 2471  T

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Target: scaffold0321 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 7213 - 7178
Alignment:
Q  219 ttccttctatcctaattgaataagtgatttcacata 254  Q
    |||||| |||||||||||||||||||||||||||||    
T  7213 ttccttttatcctaattgaataagtgatttcacata 7178  T

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Target: scaffold0121 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 13392 - 13346
Alignment:
Q  156 agaggggtgatttagggtcaattttgacccaataatcactcctccga 202  Q
    |||| |||||||||||||||||||||| |||| |||||| |||||||    
T  13392 agagaggtgatttagggtcaattttgatccaaaaatcacccctccga 13346  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 254
Target Start/End: Complemental strand, 404341 - 404312
Alignment:
Q  225 ctatcctaattgaataagtgatttcacata 254  Q
    ||||||||||||||||||||||||||||||    
T  404341 ctatcctaattgaataagtgatttcacata 404312  T

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