View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15126_low_52 (Length: 239)

Name: NF15126_low_52
Description: NF15126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15126_low_52
NF15126_low_52
[»] chr5 (57 HSPs)
chr5 (1-221)||(1248480-1248700)
chr5 (2-139)||(7827884-7828021)
chr5 (2-126)||(6753630-6753753)
chr5 (2-147)||(27542813-27542958)
chr5 (18-146)||(38508138-38508266)
chr5 (2-139)||(6315735-6315872)
chr5 (2-119)||(40530202-40530319)
chr5 (1-120)||(8724986-8725105)
chr5 (2-133)||(21060648-21060779)
chr5 (3-117)||(15439299-15439413)
chr5 (1-91)||(27580617-27580707)
chr5 (2-122)||(8698327-8698447)
chr5 (3-135)||(40899937-40900069)
chr5 (1-124)||(31655070-31655193)
chr5 (2-124)||(2232046-2232164)
chr5 (3-119)||(4818570-4818686)
chr5 (11-139)||(32440168-32440296)
chr5 (2-101)||(6754047-6754145)
chr5 (1-100)||(29374359-29374458)
chr5 (1-119)||(29856064-29856180)
chr5 (22-124)||(9515784-9515886)
chr5 (2-116)||(19929964-19930078)
chr5 (2-139)||(30512643-30512781)
chr5 (2-139)||(30552983-30553121)
chr5 (12-139)||(843469-843592)
chr5 (2-111)||(6615866-6615975)
chr5 (38-135)||(41478881-41478978)
chr5 (3-95)||(11796169-11796261)
chr5 (14-97)||(18841509-18841592)
chr5 (17-96)||(41062161-41062240)
chr5 (6-117)||(41496102-41496213)
chr5 (2-124)||(29570410-29570532)
chr5 (6-126)||(11904227-11904348)
chr5 (6-124)||(15818453-15818573)
chr5 (19-118)||(37184058-37184157)
chr5 (6-92)||(4441043-4441129)
chr5 (38-131)||(41492356-41492449)
chr5 (2-119)||(42803598-42803715)
chr5 (3-126)||(5282361-5282484)
chr5 (4-103)||(8493832-8493931)
chr5 (2-69)||(38161440-38161507)
chr5 (2-83)||(11761313-11761393)
chr5 (14-101)||(5731806-5731893)
chr5 (7-102)||(22848379-22848474)
chr5 (2-65)||(26285510-26285573)
chr5 (16-139)||(2588026-2588142)
chr5 (5-97)||(18890555-18890647)
chr5 (70-134)||(42922830-42922894)
chr5 (18-91)||(14339337-14339410)
chr5 (1-68)||(5129261-5129328)
chr5 (38-105)||(9637873-9637940)
chr5 (6-64)||(7330529-7330587)
chr5 (17-100)||(7580999-7581086)
chr5 (7-100)||(39213369-39213465)
chr5 (53-91)||(40616077-40616115)
chr5 (52-97)||(3076658-3076703)
chr5 (16-52)||(32490489-32490525)
[»] chr3 (73 HSPs)
chr3 (2-139)||(30190620-30190757)
chr3 (1-137)||(24569062-24569198)
chr3 (3-139)||(37695625-37695762)
chr3 (2-138)||(10366603-10366746)
chr3 (4-119)||(43253843-43253958)
chr3 (2-136)||(19823029-19823163)
chr3 (1-119)||(27471352-27471470)
chr3 (2-139)||(8679014-8679151)
chr3 (6-124)||(37311972-37312090)
chr3 (2-136)||(45710868-45711002)
chr3 (3-139)||(5322899-5323033)
chr3 (2-147)||(37497510-37497655)
chr3 (3-139)||(36476603-36476739)
chr3 (1-140)||(53560234-53560373)
chr3 (2-124)||(36460391-36460513)
chr3 (2-139)||(29023926-29024062)
chr3 (2-138)||(11905840-11905976)
chr3 (3-146)||(19609318-19609461)
chr3 (2-121)||(28690760-28690879)
chr3 (1-147)||(52290910-52291056)
chr3 (2-139)||(44301580-44301717)
chr3 (1-138)||(51837920-51838057)
chr3 (6-126)||(12736545-12736665)
chr3 (3-139)||(19611928-19612063)
chr3 (17-139)||(49830162-49830285)
chr3 (2-124)||(23004358-23004479)
chr3 (1-119)||(37772944-37773062)
chr3 (2-135)||(38795362-38795495)
chr3 (2-118)||(11632099-11632214)
chr3 (2-147)||(17652770-17652911)
chr3 (2-97)||(3901151-3901246)
chr3 (1-91)||(54477467-54477557)
chr3 (2-124)||(3313272-3313390)
chr3 (2-119)||(14194574-14194690)
chr3 (1-126)||(48540973-48541098)
chr3 (2-150)||(1778661-1778808)
chr3 (6-118)||(34750518-34750630)
chr3 (2-97)||(30682068-30682163)
chr3 (3-137)||(34957522-34957656)
chr3 (1-78)||(39043775-39043855)
chr3 (17-118)||(50035198-50035299)
chr3 (3-100)||(54726504-54726601)
chr3 (6-133)||(43719289-43719415)
chr3 (2-94)||(12904882-12904975)
chr3 (25-126)||(45811697-45811797)
chr3 (4-72)||(43870836-43870904)
chr3 (19-100)||(30711108-30711189)
chr3 (57-141)||(33491041-33491125)
chr3 (29-124)||(31158497-31158591)
chr3 (7-101)||(10973559-10973653)
chr3 (6-84)||(24245109-24245186)
chr3 (2-44)||(41038448-41038490)
chr3 (1-42)||(37804802-37804843)
chr3 (17-124)||(49447769-49447873)
chr3 (2-50)||(33491408-33491456)
chr3 (25-97)||(52206849-52206921)
chr3 (11-102)||(29595724-29595815)
chr3 (3-73)||(38705194-38705266)
chr3 (26-104)||(25090049-25090127)
chr3 (2-100)||(36462945-36463043)
chr3 (53-151)||(51064766-51064864)
chr3 (11-100)||(39931656-39931745)
chr3 (16-73)||(42278697-42278754)
chr3 (6-141)||(38137401-38137539)
chr3 (37-97)||(44684988-44685048)
chr3 (3-126)||(26467128-26467252)
chr3 (2-44)||(40194521-40194563)
chr3 (19-76)||(48893775-48893832)
chr3 (26-102)||(20354434-20354510)
chr3 (3-111)||(23068217-23068327)
chr3 (14-42)||(37804765-37804793)
chr3 (3-47)||(37804854-37804898)
chr3 (3-135)||(38512044-38512176)
[»] chr8 (65 HSPs)
chr8 (1-139)||(10179908-10180046)
chr8 (2-134)||(31271039-31271171)
chr8 (7-124)||(1875568-1875685)
chr8 (3-140)||(32476306-32476443)
chr8 (2-137)||(17719221-17719356)
chr8 (3-140)||(51132-51268)
chr8 (4-124)||(39482635-39482755)
chr8 (1-135)||(7172931-7173065)
chr8 (1-147)||(39405779-39405925)
chr8 (2-119)||(21216082-21216199)
chr8 (16-118)||(42972490-42972592)
chr8 (7-100)||(396611-396704)
chr8 (23-124)||(39300917-39301018)
chr8 (2-91)||(44761503-44761592)
chr8 (1-121)||(9300092-9300212)
chr8 (2-146)||(34948641-34948785)
chr8 (2-124)||(45425642-45425764)
chr8 (2-139)||(10097952-10098089)
chr8 (3-124)||(11976912-11977033)
chr8 (2-147)||(40996318-40996463)
chr8 (3-135)||(4428317-4428448)
chr8 (26-126)||(7703130-7703230)
chr8 (2-147)||(22771788-22771933)
chr8 (18-111)||(41092028-41092121)
chr8 (3-135)||(13335235-13335367)
chr8 (2-124)||(17823939-17824060)
chr8 (2-124)||(31082637-31082759)
chr8 (2-88)||(42887018-42887104)
chr8 (14-118)||(33765690-33765794)
chr8 (6-97)||(5053156-5053247)
chr8 (9-124)||(26626088-26626203)
chr8 (2-136)||(27294023-27294157)
chr8 (2-100)||(31231748-31231846)
chr8 (19-140)||(34393914-34394035)
chr8 (30-118)||(39329065-39329153)
chr8 (2-97)||(31331426-31331521)
chr8 (40-131)||(36967417-36967508)
chr8 (16-138)||(2767253-2767375)
chr8 (3-101)||(40028531-40028632)
chr8 (1-97)||(4924070-4924166)
chr8 (53-116)||(1739709-1739772)
chr8 (7-118)||(14854916-14855027)
chr8 (54-104)||(6611767-6611817)
chr8 (2-92)||(34057626-34057716)
chr8 (11-92)||(44648540-44648621)
chr8 (53-123)||(29226208-29226278)
chr8 (2-56)||(32678421-32678475)
chr8 (53-126)||(21649312-21649385)
chr8 (6-54)||(1739565-1739613)
chr8 (3-55)||(35732140-35732192)
chr8 (3-146)||(36006840-36006984)
chr8 (6-74)||(39466063-39466131)
chr8 (3-50)||(29226578-29226625)
chr8 (7-91)||(3117029-3117111)
chr8 (2-91)||(5356618-5356706)
chr8 (46-139)||(6796006-6796099)
chr8 (53-146)||(32678787-32678880)
chr8 (26-126)||(12559635-12559734)
chr8 (17-99)||(7672342-7672424)
chr8 (17-135)||(9839791-9839909)
chr8 (1-35)||(39301021-39301055)
chr8 (16-101)||(6323334-6323418)
chr8 (16-96)||(5878993-5879073)
chr8 (3-43)||(12559582-12559622)
chr8 (17-97)||(15809985-15810063)
[»] chr1 (88 HSPs)
chr1 (2-139)||(39864129-39864266)
chr1 (3-135)||(26093413-26093545)
chr1 (2-147)||(917042-917187)
chr1 (1-136)||(6160425-6160560)
chr1 (2-139)||(49223949-49224086)
chr1 (3-139)||(16395010-16395145)
chr1 (2-124)||(12039100-12039222)
chr1 (1-139)||(31978615-31978753)
chr1 (1-118)||(31042814-31042931)
chr1 (1-104)||(7759232-7759335)
chr1 (1-139)||(2572486-2572623)
chr1 (2-119)||(12151194-12151311)
chr1 (17-118)||(28749024-28749125)
chr1 (2-100)||(20209842-20209940)
chr1 (7-101)||(24880899-24880993)
chr1 (3-97)||(36701940-36702034)
chr1 (3-97)||(36718044-36718138)
chr1 (2-119)||(32970550-32970667)
chr1 (2-135)||(40144814-40144947)
chr1 (2-137)||(15699140-15699276)
chr1 (4-124)||(23168971-23169091)
chr1 (16-139)||(34031489-34031613)
chr1 (2-121)||(10495857-10495975)
chr1 (17-144)||(33733221-33733347)
chr1 (2-124)||(9307645-9307767)
chr1 (19-139)||(11449920-11450038)
chr1 (8-139)||(41121785-41121919)
chr1 (17-137)||(42410027-42410147)
chr1 (2-97)||(8896337-8896432)
chr1 (3-86)||(14757610-14757693)
chr1 (1-139)||(37506141-37506282)
chr1 (3-125)||(30754918-30755040)
chr1 (1-111)||(44761522-44761632)
chr1 (1-119)||(52429361-52429479)
chr1 (6-138)||(38787363-38787495)
chr1 (19-135)||(45331376-45331492)
chr1 (10-153)||(5179348-5179491)
chr1 (2-124)||(6023627-6023749)
chr1 (2-124)||(24991631-24991753)
chr1 (6-104)||(37276483-37276581)
chr1 (2-104)||(44707758-44707860)
chr1 (8-130)||(17988530-17988654)
chr1 (17-75)||(29778423-29778481)
chr1 (8-100)||(22181360-22181452)
chr1 (19-119)||(35538678-35538778)
chr1 (19-99)||(49176952-49177032)
chr1 (16-131)||(32825963-32826077)
chr1 (6-124)||(4441581-4441699)
chr1 (2-68)||(32219695-32219761)
chr1 (10-91)||(3312137-3312218)
chr1 (5-146)||(6267812-6267953)
chr1 (41-118)||(27687298-27687375)
chr1 (3-91)||(6365650-6365738)
chr1 (3-147)||(13579576-13579720)
chr1 (3-119)||(21909989-21910104)
chr1 (5-72)||(22856267-22856334)
chr1 (6-68)||(52837302-52837364)
chr1 (3-135)||(3260610-3260738)
chr1 (4-53)||(16783256-16783305)
chr1 (1-74)||(24903988-24904061)
chr1 (19-124)||(51028471-51028576)
chr1 (54-146)||(7439871-7439963)
chr1 (3-51)||(35367821-35367869)
chr1 (40-124)||(43500762-43500846)
chr1 (37-97)||(43614450-43614510)
chr1 (53-104)||(35367643-35367694)
chr1 (10-97)||(45615557-45615644)
chr1 (16-110)||(978849-978943)
chr1 (4-50)||(15904771-15904817)
chr1 (20-106)||(31154164-31154249)
chr1 (2-83)||(7351654-7351735)
chr1 (3-91)||(9379250-9379339)
chr1 (2-111)||(27896973-27897082)
chr1 (2-34)||(25089154-25089186)
chr1 (29-92)||(7460438-7460501)
chr1 (17-112)||(26257930-26258025)
chr1 (2-97)||(29074902-29074997)
chr1 (4-91)||(34688858-34688945)
chr1 (4-91)||(34693386-34693473)
chr1 (52-147)||(37177913-37178007)
chr1 (10-52)||(13365999-13366041)
chr1 (4-86)||(15057450-15057531)
chr1 (41-111)||(35682796-35682866)
chr1 (58-99)||(4659831-4659872)
chr1 (19-68)||(9412837-9412886)
chr1 (3-52)||(37539146-37539195)
chr1 (16-97)||(41080630-41080711)
chr1 (40-100)||(15444483-15444543)
[»] chr6 (53 HSPs)
chr6 (2-124)||(15058135-15058257)
chr6 (2-119)||(31894189-31894306)
chr6 (2-146)||(3291720-3291864)
chr6 (10-147)||(1955930-1956067)
chr6 (2-135)||(6801949-6802082)
chr6 (2-139)||(11655905-11656042)
chr6 (19-147)||(21010212-21010340)
chr6 (1-119)||(1781820-1781937)
chr6 (2-139)||(13087548-13087685)
chr6 (2-139)||(32440604-32440741)
chr6 (3-111)||(13909443-13909551)
chr6 (3-97)||(1063604-1063698)
chr6 (1-119)||(7920256-7920373)
chr6 (2-139)||(29363324-29363461)
chr6 (5-104)||(23142688-23142787)
chr6 (2-103)||(24983444-24983545)
chr6 (1-124)||(3720215-3720338)
chr6 (2-119)||(1225065-1225182)
chr6 (2-134)||(30716918-30717050)
chr6 (2-139)||(17828958-17829094)
chr6 (16-91)||(21804536-21804610)
chr6 (3-147)||(15582302-15582446)
chr6 (2-73)||(34300013-34300084)
chr6 (2-100)||(5302369-5302467)
chr6 (17-139)||(6834328-6834450)
chr6 (2-87)||(11143597-11143683)
chr6 (7-68)||(8115068-8115129)
chr6 (23-139)||(27448115-27448231)
chr6 (2-104)||(181574-181675)
chr6 (37-119)||(7072213-7072295)
chr6 (9-82)||(28101375-28101448)
chr6 (51-111)||(8114999-8115059)
chr6 (26-109)||(4581970-4582053)
chr6 (2-65)||(16431038-16431101)
chr6 (14-101)||(26592352-26592439)
chr6 (28-102)||(2423662-2423736)
chr6 (2-56)||(4367295-4367349)
chr6 (6-63)||(8695067-8695124)
chr6 (6-97)||(25417966-25418057)
chr6 (2-92)||(17835402-17835492)
chr6 (7-104)||(32251887-32251984)
chr6 (26-86)||(4590610-4590670)
chr6 (2-50)||(34657610-34657658)
chr6 (80-147)||(15046165-15046232)
chr6 (3-38)||(22398432-22398467)
chr6 (53-104)||(34639446-34639497)
chr6 (1-91)||(7764246-7764335)
chr6 (7-105)||(12605456-12605554)
chr6 (19-97)||(27823338-27823416)
chr6 (1-46)||(13206884-13206929)
chr6 (6-103)||(23397616-23397713)
chr6 (2-63)||(33510158-33510218)
chr6 (19-52)||(34436271-34436304)
[»] chr7 (78 HSPs)
chr7 (1-139)||(26974050-26974191)
chr7 (2-147)||(9786013-9786158)
chr7 (2-146)||(34100507-34100651)
chr7 (2-135)||(27921013-27921146)
chr7 (2-139)||(34947525-34947662)
chr7 (2-117)||(41506054-41506169)
chr7 (2-119)||(28103758-28103875)
chr7 (3-139)||(83411-83547)
chr7 (3-119)||(30865993-30866109)
chr7 (1-124)||(32346034-32346157)
chr7 (2-139)||(16560537-16560674)
chr7 (2-139)||(16604988-16605125)
chr7 (2-147)||(28202268-28202413)
chr7 (2-124)||(11373410-11373532)
chr7 (2-104)||(24516291-24516393)
chr7 (2-111)||(5524405-5524514)
chr7 (16-140)||(42935700-42935824)
chr7 (16-147)||(2850840-2850971)
chr7 (2-124)||(3178186-3178308)
chr7 (2-124)||(7463238-7463360)
chr7 (3-146)||(21390321-21390466)
chr7 (2-124)||(21759966-21760088)
chr7 (2-119)||(38391773-38391890)
chr7 (18-135)||(40076356-40076473)
chr7 (2-110)||(19271729-19271837)
chr7 (2-142)||(22738726-22738866)
chr7 (1-121)||(33819238-33819358)
chr7 (40-139)||(44180268-44180367)
chr7 (2-136)||(759061-759195)
chr7 (18-124)||(7457403-7457509)
chr7 (2-136)||(16904404-16904538)
chr7 (1-118)||(49101687-49101807)
chr7 (4-124)||(2459498-2459616)
chr7 (3-147)||(8592399-8592543)
chr7 (19-119)||(29835401-29835501)
chr7 (2-104)||(46478295-46478397)
chr7 (2-139)||(13961984-13962121)
chr7 (2-124)||(21350610-21350729)
chr7 (3-119)||(23670512-23670627)
chr7 (2-118)||(32018700-32018816)
chr7 (2-124)||(17828334-17828455)
chr7 (2-119)||(37245715-37245834)
chr7 (2-100)||(43873948-43874046)
chr7 (2-112)||(32018909-32019020)
chr7 (6-97)||(21937796-21937887)
chr7 (23-146)||(39452390-39452512)
chr7 (21-139)||(46211472-46211593)
chr7 (21-91)||(47045469-47045538)
chr7 (2-67)||(6494973-6495038)
chr7 (7-100)||(7930083-7930176)
chr7 (17-118)||(12631345-12631446)
chr7 (2-127)||(48608891-48609012)
chr7 (6-73)||(17610571-17610638)
chr7 (11-146)||(31930457-31930592)
chr7 (17-68)||(39005461-39005512)
chr7 (2-56)||(25571444-25571498)
chr7 (3-85)||(35333069-35333151)
chr7 (2-141)||(44424169-44424299)
chr7 (27-100)||(27556975-27557048)
chr7 (59-122)||(7004441-7004504)
chr7 (59-122)||(7019799-7019862)
chr7 (59-122)||(7050312-7050375)
chr7 (7-66)||(24167021-24167080)
chr7 (8-63)||(42796039-42796094)
chr7 (19-89)||(15464720-15464790)
chr7 (14-140)||(19060367-19060488)
chr7 (26-104)||(25530992-25531070)
chr7 (16-58)||(27903314-27903356)
chr7 (26-94)||(31327482-31327550)
chr7 (4-67)||(10042308-10042371)
chr7 (21-102)||(30107160-30107241)
chr7 (19-92)||(47254958-47255031)
chr7 (7-55)||(7348203-7348251)
chr7 (2-50)||(17610927-17610975)
chr7 (40-92)||(27167905-27167957)
chr7 (4-96)||(30546365-30546457)
chr7 (83-139)||(36790852-36790908)
chr7 (4-44)||(38032765-38032805)
[»] chr4 (91 HSPs)
chr4 (1-139)||(52247394-52247532)
chr4 (2-147)||(32884819-32884964)
chr4 (2-139)||(38405068-38405205)
chr4 (6-139)||(2653442-2653573)
chr4 (2-137)||(33790699-33790834)
chr4 (2-124)||(47464346-47464468)
chr4 (2-119)||(35311209-35311326)
chr4 (2-139)||(49428308-49428445)
chr4 (3-131)||(54506807-54506935)
chr4 (1-111)||(34360672-34360782)
chr4 (1-139)||(52859765-52859903)
chr4 (2-119)||(11288616-11288732)
chr4 (2-139)||(11907565-11907702)
chr4 (17-139)||(36985819-36985941)
chr4 (2-139)||(47772985-47773122)
chr4 (3-124)||(53346778-53346899)
chr4 (2-118)||(17237283-17237399)
chr4 (4-144)||(42616864-42617004)
chr4 (2-126)||(49175913-49176037)
chr4 (2-126)||(53412126-53412250)
chr4 (8-139)||(5841393-5841524)
chr4 (1-124)||(7061645-7061768)
chr4 (12-139)||(28500857-28500984)
chr4 (1-139)||(16821297-16821435)
chr4 (2-104)||(35380334-35380436)
chr4 (14-104)||(42517639-42517729)
chr4 (2-124)||(43237261-43237383)
chr4 (6-139)||(17114462-17114595)
chr4 (2-139)||(25233199-25233336)
chr4 (19-119)||(46396869-46396969)
chr4 (1-152)||(2942598-2942748)
chr4 (1-139)||(461975-462113)
chr4 (19-124)||(29575143-29575248)
chr4 (3-124)||(40122835-40122956)
chr4 (3-147)||(2066808-2066952)
chr4 (3-131)||(3689581-3689709)
chr4 (40-136)||(51625139-51625235)
chr4 (19-146)||(4972595-4972722)
chr4 (2-139)||(6609779-6609917)
chr4 (2-104)||(6643661-6643763)
chr4 (2-139)||(38502448-38502585)
chr4 (6-146)||(18532201-18532341)
chr4 (1-125)||(30682176-30682300)
chr4 (2-146)||(22130061-22130209)
chr4 (26-136)||(8175549-8175659)
chr4 (3-121)||(44536180-44536298)
chr4 (1-83)||(50264102-50264184)
chr4 (19-135)||(32469918-32470034)
chr4 (1-100)||(19265825-19265924)
chr4 (2-101)||(21240708-21240807)
chr4 (2-85)||(26147635-26147718)
chr4 (23-126)||(27880221-27880323)
chr4 (17-104)||(30192238-30192325)
chr4 (2-72)||(38663480-38663550)
chr4 (2-110)||(49746979-49747086)
chr4 (6-104)||(39157874-39157973)
chr4 (1-96)||(47358958-47359053)
chr4 (2-107)||(35998829-35998934)
chr4 (38-135)||(41711426-41711523)
chr4 (19-124)||(52869107-52869212)
chr4 (19-111)||(39397379-39397471)
chr4 (7-98)||(11024897-11024988)
chr4 (2-85)||(18741494-18741577)
chr4 (3-97)||(48914151-48914250)
chr4 (37-139)||(35251942-35252044)
chr4 (23-102)||(3098757-3098836)
chr4 (4-102)||(20612174-20612272)
chr4 (19-100)||(10215169-10215250)
chr4 (45-98)||(21325171-21325224)
chr4 (2-105)||(43902269-43902375)
chr4 (3-78)||(7986993-7987068)
chr4 (6-91)||(16506248-16506332)
chr4 (39-124)||(20598168-20598253)
chr4 (20-92)||(17512352-17512424)
chr4 (23-67)||(29295253-29295296)
chr4 (15-63)||(37868640-37868688)
chr4 (24-103)||(5618582-5618661)
chr4 (58-101)||(34321715-34321758)
chr4 (52-98)||(31370312-31370358)
chr4 (2-91)||(49579192-49579281)
chr4 (84-146)||(50263891-50263953)
chr4 (12-73)||(12567214-12567275)
chr4 (56-125)||(16411347-16411416)
chr4 (7-92)||(21761010-21761095)
chr4 (7-100)||(23915435-23915528)
chr4 (4-96)||(2400798-2400890)
chr4 (26-62)||(16411435-16411471)
chr4 (2-54)||(25142430-25142482)
chr4 (47-107)||(25869842-25869902)
chr4 (26-102)||(36217385-36217461)
chr4 (55-91)||(45789157-45789193)
[»] chr2 (60 HSPs)
chr2 (1-138)||(39691507-39691644)
chr2 (3-146)||(37322447-37322591)
chr2 (3-139)||(45235600-45235736)
chr2 (3-138)||(16463708-16463843)
chr2 (2-148)||(36354392-36354538)
chr2 (3-139)||(14523330-14523466)
chr2 (2-126)||(16805899-16806023)
chr2 (2-126)||(16845180-16845304)
chr2 (2-147)||(15359037-15359182)
chr2 (6-119)||(16377634-16377747)
chr2 (1-126)||(43115773-43115898)
chr2 (2-146)||(17695348-17695492)
chr2 (2-146)||(25637499-25637642)
chr2 (2-139)||(39785603-39785743)
chr2 (2-139)||(36794302-36794439)
chr2 (1-146)||(43410443-43410588)
chr2 (2-118)||(5789627-5789743)
chr2 (4-147)||(41220895-41221039)
chr2 (2-125)||(31448665-31448788)
chr2 (1-120)||(34225607-34225726)
chr2 (37-125)||(19937730-19937818)
chr2 (3-104)||(35313906-35314007)
chr2 (2-101)||(8947048-8947147)
chr2 (2-139)||(34120397-34120532)
chr2 (19-92)||(1206708-1206781)
chr2 (2-111)||(17346349-17346457)
chr2 (49-119)||(27501516-27501586)
chr2 (26-101)||(43699595-43699670)
chr2 (46-124)||(3323259-3323337)
chr2 (17-140)||(18853157-18853281)
chr2 (57-119)||(26607946-26608008)
chr2 (1-62)||(26608178-26608239)
chr2 (6-111)||(39329648-39329754)
chr2 (6-100)||(31976370-31976464)
chr2 (2-116)||(35242278-35242392)
chr2 (24-100)||(32783404-32783480)
chr2 (6-97)||(32831175-32831266)
chr2 (17-100)||(34437998-34438081)
chr2 (2-91)||(19426473-19426563)
chr2 (1-119)||(28186231-28186348)
chr2 (2-92)||(34451340-34451430)
chr2 (19-104)||(27866527-27866611)
chr2 (7-100)||(38763571-38763664)
chr2 (1-41)||(19937402-19937442)
chr2 (43-111)||(28170569-28170637)
chr2 (60-124)||(39443789-39443853)
chr2 (24-143)||(10005079-10005197)
chr2 (4-91)||(43730635-43730720)
chr2 (3-141)||(11742482-11742622)
chr2 (56-115)||(12520832-12520891)
chr2 (17-68)||(38187912-38187963)
chr2 (9-63)||(2053283-2053337)
chr2 (78-124)||(7438879-7438925)
chr2 (4-50)||(26863405-26863451)
chr2 (15-64)||(3601415-3601464)
chr2 (31-88)||(36173351-36173408)
chr2 (14-55)||(38449159-38449200)
chr2 (2-34)||(3323335-3323367)
chr2 (24-104)||(4410988-4411067)
chr2 (2-38)||(18202123-18202159)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-119)||(105701-105819)
[»] scaffold0110 (1 HSPs)
scaffold0110 (2-135)||(1722-1855)
[»] scaffold0018 (1 HSPs)
scaffold0018 (3-124)||(136012-136133)
[»] scaffold0095 (2 HSPs)
scaffold0095 (1-147)||(50221-50367)
scaffold0095 (6-74)||(22370-22438)
[»] scaffold0330 (1 HSPs)
scaffold0330 (2-119)||(5408-5525)
[»] scaffold0182 (1 HSPs)
scaffold0182 (2-135)||(20317-20450)
[»] scaffold0159 (1 HSPs)
scaffold0159 (2-118)||(34000-34116)
[»] scaffold0583 (1 HSPs)
scaffold0583 (16-139)||(2057-2180)
[»] scaffold0302 (1 HSPs)
scaffold0302 (5-124)||(16119-16238)
[»] scaffold0328 (1 HSPs)
scaffold0328 (2-139)||(7941-8078)
[»] scaffold0294 (1 HSPs)
scaffold0294 (19-124)||(17070-17175)
[»] scaffold1391 (1 HSPs)
scaffold1391 (19-139)||(1777-1897)
[»] scaffold0188 (1 HSPs)
scaffold0188 (39-123)||(6792-6876)
[»] scaffold0003 (2 HSPs)
scaffold0003 (23-139)||(39127-39243)
scaffold0003 (53-137)||(252491-252575)
[»] scaffold0470 (1 HSPs)
scaffold0470 (54-104)||(1055-1105)
[»] scaffold1809 (1 HSPs)
scaffold1809 (16-86)||(697-767)
[»] scaffold0021 (1 HSPs)
scaffold0021 (7-101)||(126194-126288)
[»] scaffold0279 (1 HSPs)
scaffold0279 (27-100)||(12041-12114)
[»] scaffold0464 (1 HSPs)
scaffold0464 (37-124)||(6260-6347)
[»] scaffold2146 (1 HSPs)
scaffold2146 (16-73)||(437-494)
[»] scaffold0015 (1 HSPs)
scaffold0015 (4-76)||(42897-42969)


Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 1248700 - 1248480
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||| |||| ||||||||    
T  1248700 tcaacttaactacttcactaactacaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacataattaataatttccttaataa 1248601  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacggatgaagtatcatctatttactattcatttatgaaagagataaatacaaaaatggatgatcaa 200  Q
     ||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1248600 ccgtgcacaaatcttaaacgactattttttaaagacggatgaagtatcatctatttactattcatttatgaaagagataaatacaaaaatggatgatcaa 1248501  T
Q  201 tgaggtatttcatgtttccgt 221  Q
    |||||||||||||||||||||    
T  1248500 tgaggtatttcatgtttccgt 1248480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 7828021 - 7827884
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  7828021 caacttaactactccactaactacaattaataagggtattttaataaatgatactaattttaccattgaaatcaacacaattaattattttcttaataat 7827922  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    |||  ||||| ||||||| | |||| ||||||||||||    
T  7827921 cgtgtacaaaccttaaacgattattatttagagacgga 7827884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 6753753 - 6753630
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  6753753 caacttaactactccactaactacaattaataagggtattttagtaaatgatactaattttaccattgaaattaata-aattaatcattttcttaataat 6753655  T
Q  102 cgtacacaaatcttaaacaactatt 126  Q
    ||| || ||| ||||||| ||||||    
T  6753654 cgtgcataaaccttaaacgactatt 6753630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 27542813 - 27542958
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||| ||| |||||||| |||||||||    
T  27542813 caacttaactactccactaactacaattaataagagtattttagtaaatggtattaattttaccattgaaatcaacacaatcaatcatttccttaataat 27542912  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
    ||| |||||| ||||||| || ||  |||||||||| ||| |||||    
T  27542913 cgtgcacaaaccttaaacgacaataatttagagacgaatggagtat 27542958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 38508266 - 38508138
Alignment:
Q  18 ctaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaa 117  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| |||||||||||||||||| |||||  ||||||||||||    
T  38508266 ctaactacaattaataagagtattttaatgagtgatactaattttaccattgaaattaacacaattaatcattttcttaaaaatcgagcacaaatcttaa 38508167  T
Q  118 acaactattttttagagacggatgaagta 146  Q
    || |||||| ||| |||||||||| ||||    
T  38508166 acgactattattttgagacggatggagta 38508138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 6315872 - 6315735
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||| |||||||| |||||||||    
T  6315872 caacttaactacttcactaactacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacacaatcaatcatttccttaataat 6315773  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||   ||||  ||||||| |||||  ||||||||||||    
T  6315772 cgagtacaacccttaaacgactataatttagagacgga 6315735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 40530319 - 40530202
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||| ||| |||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  40530319 caacttaaccactccactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataat 40530220  T
Q  102 cgtacacaaatcttaaac 119  Q
    ||| |||| | |||||||    
T  40530219 cgtgcacagaccttaaac 40530202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8725105 - 8724986
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||| ||||||||| |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||| ||||||||||||  |||||||    
T  8725105 tcaagttaactactccactaactacaattaataagtgtgttttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttctttaataa 8725006  T
Q  101 tcgtacacaaatcttaaaca 120  Q
    |||| |||||| ||||||||    
T  8725005 tcgtgcacaaaccttaaaca 8724986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 21060648 - 21060779
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||| |||||||||||| | ||||||     
T  21060648 caacttaactactccactaactacaattaataagagtattttagtaaataatactaattttaccatcaaaataaacacaattaatcatttccctaataac 21060747  T
Q  102 cgtacacaaatcttaaacaactattttttaga 133  Q
    ||| || ||| ||||||| |||||| ||||||    
T  21060748 cgtgcataaaccttaaacgactattatttaga 21060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 15439413 - 15439299
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||  |||    
T  15439413 aacttaactactactctaaatacaattaataaaagtattttagtaaatgatactaattttaccattgaaattaatacaattaatcatttccttaaatatc 15439314  T
Q  103 gtacacaaatcttaa 117  Q
    || |||||| |||||    
T  15439313 gtgcacaaaacttaa 15439299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 27580617 - 27580707
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||| ||||||||||||    
T  27580617 tcaacttaactactccactaactacaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaattaatcattt 27580707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 8698327 - 8698447
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||| ||| |||||||||||||||||||| || |||| |||||||  |||||||||||||||||||| |||| ||||||||||||  ||||||||    
T  8698327 caacttaaccactccactaactacaattaataagggtgttttggtaaatgcaactaattttaccattgaaatcaacacaattaatcatttctttaataat 8698426  T
Q  102 cgtacacaaatcttaaacaac 122  Q
    ||| |||||| ||||||||||    
T  8698427 cgtgcacaaaccttaaacaac 8698447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 40899937 - 40900069
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||  |||| |||| |||||||||||| |||||||| |    
T  40899937 aacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttgccatcaaaatcaacacaattaatcatttccttaataacc 40900036  T
Q  103 gtacacaaatcttaaacaactattttttagaga 135  Q
    || || ||| ||||||  |||||| ||||||||    
T  40900037 gtgcataaaccttaaatgactattatttagaga 40900069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 31655070 - 31655193
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||| ||| |||| ||||||||||||||||||||  |||| |||||||||||| |||||||||||||||||| |||| ||||||||||||  |||||||    
T  31655070 tcaacataattactccactaactacaattaataaggatattatagtaaatgatattaattttaccattgaaatcaacacaattaatcatttctttaataa 31655169  T
Q  101 tcgtacacaaatcttaaacaacta 124  Q
    |||||||||||  |||||| ||||    
T  31655170 tcgtacacaaactttaaacgacta 31655193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 2232164 - 2232046
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||    ||||||||||||| ||||| |||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  2232164 caacttaactactccactaa----aattaataagagttttttaataaatgctactaattttaccattgaaatcaacacaattattcattttcttaataat 2232069  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    ||| |||||| ||||||| ||||    
T  2232068 cgtgcacaaaccttaaacgacta 2232046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 4818570 - 4818686
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||  ||| |||||||||||||||||||| || |||||||||||| |||||||||||| |||||||| |||| ||||||| |||| ||||||||||    
T  4818570 aacttaatcactccactaactacaattaataagggtgttttagtaaatgctactaattttacaattgaaatcaacacaattaattatttccttaataatc 4818669  T
Q  103 gtacacaaatcttaaac 119  Q
    || |||||| |||||||    
T  4818670 gtgcacaaaccttaaac 4818686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 32440168 - 32440296
Alignment:
Q  11 tacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaa 110  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||  |||| |||| | |||||    
T  32440168 tactttactaagtacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacacaattaatcatttctttaaaaatcatgcacaa 32440267  T
Q  111 atcttaaacaactattttttagagacgga 139  Q
    | ||| ||| |||||| ||| ||||||||    
T  32440268 acctttaacgactattattttgagacgga 32440296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 6754047 - 6754145
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||| |||| ||||||||||||||||| ||||    
T  6754047 caacttaactactccactaactacaattaataagagtgttttagtaaatgacattaattttactattgaaatcaaca-aattaatcattttcttattaat 6754145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 29374359 - 29374458
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||| ||||||||| |||||||||||||||||||  || |||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||    
T  29374359 tcaatttaactactccactaactacaattaataaaggtcttttagtaaatgctattaattttatcattgaaatcaacataattaatcattttcttaataa 29374458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 29856064 - 29856180
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||| || ||||| |||||||| ||||||||| |||  ||||  | |||| ||||||||    
T  29856064 tcaacttaactactccactaactacaattaataagagtattttagcaagtgatattaattttatcattgaaatcaacgcaatt--ttatttccttaataa 29856161  T
Q  101 tcgtacacaaatcttaaac 119  Q
    |||| ||||||||||||||    
T  29856162 tcgtgcacaaatcttaaac 29856180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 9515784 - 9515886
Alignment:
Q  22 ctacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaa 121  Q
    |||| |||||||||  | |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| |||||| ||||||| |    
T  9515784 ctactattaataaggatgttttagtaaatgatactaattttaccattgaaatcaacacaattaatcattatcttaataatcgtgcacaaaccttaaacga 9515883  T
Q  122 cta 124  Q
    |||    
T  9515884 cta 9515886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 19929964 - 19930078
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| ||||||||||||||||||||||  | |||||||||||||  ||| |||||||||  |||| |||| ||||||||||||||||||||||    
T  19929964 caacttaactatttcactaactacaattaataaggatgttttagtaaatgacgctagttttaccatcaaaatcaacaaaattaatcattttcttaataat 19930063  T
Q  102 cgtacacaaatctta 116  Q
    ||| || ||||||||    
T  19930064 cgtgcataaatctta 19930078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 30512781 - 30512643
Alignment:
Q  2 caacttaactacttcactaactacaa-ttaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||| |||||||||||||  ||||||||||||| ||||||||||||  |||||||||||||||||| || | |||||||||||| ||||||||    
T  30512781 caacttaactatttcactaactacatgttaataagagtatcttagtaaatgatgttaattttaccattgaaatcaatacaattaatcatttccttaataa 30512682  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    |||| || |||  ||| || |||||  ||||||||||||    
T  30512681 tcgtgcataaactttatacgactataatttagagacgga 30512643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 30553121 - 30552983
Alignment:
Q  2 caacttaactacttcactaactacaa-ttaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||| |||||||||||||  ||||||||||||| ||||||||||||  |||||||||||||||||| || | |||||||||||| ||||||||    
T  30553121 caacttaactatttcactaactacatgttaataagagtatcttagtaaatgatgttaattttaccattgaaatcaatacaattaatcatttccttaataa 30553022  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    |||| || |||  ||| || |||||  ||||||||||||    
T  30553021 tcgtgcataaactttatacgactataatttagagacgga 30552983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 843469 - 843592
Alignment:
Q  12 acttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaa 111  Q
    ||||||||||| |||||||||||||| || |||||||||||||   |||||| ||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  843469 acttcactaac-acaattaataagagcatgttagtaaatgata---attttatcattgaaatcaacaaaattaatcattttcttaataatcgtgcacaaa 843564  T
Q  112 tcttaaacaactattttttagagacgga 139  Q
     ||||||||| |||| ||  ||||||||    
T  843565 ccttaaacaattattattgtgagacgga 843592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 6615975 - 6615866
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||| ||| ||||||||| ||||||||||  | |||| ||||||| ||||||||||||||||||||| |||| ||||||| ||||  ||||||||    
T  6615975 caacttaaccactccactaactaaaattaataaggatgttttggtaaatgctactaattttaccattgaaatcaacacaattaattatttatttaataat 6615876  T
Q  102 cgtacacaaa 111  Q
    ||| ||||||    
T  6615875 cgtgcacaaa 6615866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 41478881 - 41478978
Alignment:
Q  38 tattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactattttttagaga 135  Q
    ||||||||||||||| |||||||||||||||||||| | || |||||||||||||||||| |||||  |||||| |||| || |||||| ||||||||    
T  41478881 tattttagtaaatgacactaattttaccattgaaataagcacaattaatcattttcttaaaaatcgcgcacaaaccttagacgactattatttagaga 41478978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 11796261 - 11796169
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctt 95  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||||| ||| |||||||| |||| |||| |||| |||||| |||||||||    
T  11796261 aacttaactactacactaactacaattaataataatattttagtaaataatattaattttatcattaaaatcaacacaattaaccattttctt 11796169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 18841509 - 18841592
Alignment:
Q  14 ttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||||||||||  |||||||| ||||||||| ||||||||||||| |||| || ||||||||||||||| ||||    
T  18841509 ttcactaactacaattaataacggtattttattaaatgatattaattttaccatttaaatcaatataattaatcatttttttaa 18841592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 41062240 - 41062161
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctta 96  Q
    ||||||||||||||||||| || |||||||||||||||||||||||| |||  |||| |||||||||||| |||||||||    
T  41062240 actaactacaattaataagggtgttttagtaaatgatactaattttatcatcaaaatcaacataattaattattttctta 41062161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 41496102 - 41496213
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgta 105  Q
    ||||||||| |||||||||||||||||||   | ||||| ||||||  |||||||||||||||||||| |||| ||||||| ||||| |||||||||||     
T  41496102 ttaactactccactaactacaattaataatgatgttttactaaatgcaactaattttaccattgaaatcaacacaattaattatttttttaataatcgtg 41496201  T
Q  106 cacaaatcttaa 117  Q
     ||||| |||||    
T  41496202 tacaaaccttaa 41496213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 29570410 - 29570532
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| | || ||||||||||||||||  || |||||| ||||  || |||||||| |||| |||| |||| ||||||||||||  ||||||||    
T  29570410 caacttaactattccattaactacaattaataaaggtgttttagcaaatactaataattttaacattaaaatcaacacaattaatcatttctttaataat 29570509  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    ||| |||||||||||||| ||||    
T  29570510 cgtgcacaaatcttaaacgacta 29570532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 126
Target Start/End: Original strand, 11904227 - 11904348
Alignment:
Q  6 ttaactacttcactaactacaattaa-taagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||| ||||||||  |||||| | || | ||||||||| ||||||||  |||||    
T  11904227 ttaactactccaccaactacaattaaataagagtattttagtaaatgatattaattttattattgaactcaatacaattaatcactttcttaaagatcgt 11904326  T
Q  105 acacaaatcttaaacaactatt 126  Q
     ||||||  |||||| ||||||    
T  11904327 gcacaaacattaaacgactatt 11904348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 15818573 - 15818453
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaat--gatactaattttaccattgaaattaacataattaatcattttcttaataatcg 103  Q
    ||||||||| |||| | ||||||||||||  || |||||||||||  | ||||||||||||||||||||| |||| |||||| ||||| |||||||||||    
T  15818573 ttaactactccactgattacaattaataaaggtgttttagtaaatatgctactaattttaccattgaaatcaacacaattaaacatttccttaataatcg 15818474  T
Q  104 tacacaaatcttaaacaacta 124  Q
    | || ||| ||||||| ||||    
T  15818473 tgcataaaccttaaacgacta 15818453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 37184157 - 37184058
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    |||||||||| |||||   ||||||||||||||||| |||||||||||||||||| |||  ||||||||||||| |||| |||| | |||||| ||||||    
T  37184157 taactacaatgaataaagatattttagtaaatgatattaattttaccattgaaatcaactcaattaatcatttttttaaaaatcttgcacaaaacttaaa 37184058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 4441043 - 4441129
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||| ||| |||||||| |||| |||| |||| ||||||| |||||    
T  4441043 ttaactactccactaactacaattaataaaaatattttagtaaataatattaattttatcattaaaatcaacacaattaattatttt 4441129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 41492356 - 41492449
Alignment:
Q  38 tattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactatttttta 131  Q
    ||||||||||||||  |||||||||||||||||||| | || |||||||||||||||||| |||||  |||||| |||| || |||||| ||||    
T  41492356 tattttagtaaatgtcactaattttaccattgaaataagcacaattaatcattttcttaaaaatcgcgcacaaaccttagacgactattattta 41492449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 42803715 - 42803598
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||| ||| || ||||||||||||||||  || |||||||||||  |||||||||||| |||||||| |||| ||||||| ||||  || |||||    
T  42803715 caacttaaccactccattaactacaattaataatggtgttttagtaaatactactaattttacaattgaaatgaacacaattaattatttctttgataat 42803616  T
Q  102 cgtacacaaatcttaaac 119  Q
    ||| || ||| |||||||    
T  42803615 cgtgcataaaccttaaac 42803598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 5282361 - 5282484
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||||| ||| ||||| || |||||||||    |||||||||||| ||| | |||||| |||| |||||| || |||||||||||||||||| ||      
T  5282361 aacttaacttcttaactaattataattaataaagaaattttagtaaattatatttattttatcattaaaattagcacaattaatcattttcttaaaaact 5282460  T
Q  103 gtacacaaatcttaaacaactatt 126  Q
    ||||| ||| ||||||||||||||    
T  5282461 gtacagaaaccttaaacaactatt 5282484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 8493931 - 8493832
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcg 103  Q
    |||||||||||  | |||||| ||||||||||||||| ||| ||||| ||||||||||||| ||||||||||||  || |||| || ||||||| |||||    
T  8493931 acttaactactctattaactaaaattaataagagtatattaataaatcatactaattttacgattgaaattaacccaactaattatattcttaagaatcg 8493832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 38161507 - 38161440
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattg 69  Q
    ||||||||||||| |||||||||| |||||||||  |||||||||||||||||  |||||||||||||    
T  38161507 caacttaactactccactaactacgattaataaggatattttagtaaatgatatgaattttaccattg 38161440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 11761393 - 11761313
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataatt 83  Q
    ||||||||||| |||||| | || |||| |||||||||||||||| ||||||||||||||||||||| |||| |||| ||||    
T  11761393 caacttaactatttcacttagtataatttataagagtattttagt-aatgatactaattttaccattaaaatcaacacaatt 11761313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 5731806 - 5731893
Alignment:
Q  14 ttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||| |||||||||  | ||||||||||||||||  |||||   ||| |||| |||| ||||||||||||||||||||||    
T  5731806 ttcactaactacgattaataaggatgttttagtaaatgatacacattttgttattaaaatgaacacaattaatcattttcttaataat 5731893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 22848474 - 22848379
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||| || ||||||||||||||||| || ||||| |||||  || ||||||||| |||||||| |||| ||||||||  || ||||||||||    
T  22848474 taactactccattaactacaattaataagggtgttttaataaatactattaattttactattgaaatcaacacaattaatcgcttccttaataatc 22848379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 26285573 - 26285510
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttacc 65  Q
    |||||||||||||||| ||||||||||||||| | || ||||  ||||||||||||||||||||    
T  26285573 caacttaactacttcattaactacaattaatacgtgtgttttcataaatgatactaattttacc 26285510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 2588142 - 2588026
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctt 115  Q
    |||||||||||||||||||| || ||||||||       |||||||||||||  |||| |||| |||||||||||| ||||||||  || ||  || |||    
T  2588142 cactaactacaattaataagggtgttttagta-------ctaattttaccatcaaaatcaacacaattaatcatttccttaataactgtgcatcaacctt 2588050  T
Q  116 aaacaactattttttagagacgga 139  Q
    |||| |||||| ||||||||||||    
T  2588049 aaacgactattatttagagacgga 2588026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 18890647 - 18890555
Alignment:
Q  5 cttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||| ||  || || ||||||||| | ||||||| ||||||||||||||||||||||| |||  |||  || |||||||||||||||    
T  18890647 cttaactactccaacaattaaaattaataaaaatattttaataaatgatactaattttaccattaaaaacaactcaactaatcattttcttaa 18890555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 134
Target Start/End: Complemental strand, 42922894 - 42922830
Alignment:
Q  70 aaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactattttttagag 134  Q
    |||| |||| ||||||||||||||||||||||| | |||||||||||||| |||||  |||||||    
T  42922894 aaatcaacacaattaatcattttcttaataatcatgcacaaatcttaaacgactataatttagag 42922830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 14339337 - 14339410
Alignment:
Q  18 ctaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||||||||||| | ||||||||||||| | | |||||||| ||| |||||||||  || |||||||||    
T  14339337 ctaactacaattaataaaaatattttagtaaataaaattaattttaacatagaaattaactcaactaatcattt 14339410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 5129328 - 5129261
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccatt 68  Q
    |||| |||||||||  | |||||||||||||||||| | || |||||||| ||| |||||||||||||    
T  5129328 tcaatttaactactctaataactacaattaataagaatgttatagtaaattatattaattttaccatt 5129261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 9637873 - 9637940
Alignment:
Q  38 tattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgta 105  Q
    ||||||||||||||| ||  |||||| |||| |||| ||||| ||||||||||| ||||||| |||||    
T  9637873 tattttagtaaatgacacatattttatcattaaaatcaacattattaatcatttccttaatactcgta 9637940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 7330529 - 7330587
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttac 64  Q
    ||||||||| |||||| || ||||||||||||| ||||| | ||||||| |||||||||    
T  7330529 ttaactactccactaattagaattaataagagtgttttactgaatgatattaattttac 7330587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 7580999 - 7581086
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgat----actaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||| |||||| || ||| ||||||||||||||    || ||||||  |||| |||||||||| |||||||||||| |||||||    
T  7580999 actaactataattaacaaaagtgttttagtaaatgatgaatacaaattttgtcattaaaattaacattattaatcattttattaataa 7581086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 39213369 - 39213465
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaaca---taattaatcattttcttaataa 100  Q
    |||||||| ||||||||| ||||||||||||| ||||| |||| |||||  ||||| ||||| |||| | ||   | ||||||||||| ||||||||    
T  39213369 taactactccactaactataattaataagagtgttttattaaaggatacatattttgccattaaaatcatcaacgttattaatcatttccttaataa 39213465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 40616115 - 40616077
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  40616115 tactaattttaccattgcaatcaacataattaatcattt 40616077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 3076658 - 3076703
Alignment:
Q  52 atactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||| ||||||||| |||| ||||||||||||| ||||    
T  3076658 atactaattttatcattgaaatcaacacaattaatcattttgttaa 3076703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 32490525 - 32490489
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatga 52  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  32490525 cactaactactattaataagagtagtttagtaaatga 32490489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 30190757 - 30190620
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||| ||||     
T  30190757 caacttaactactccactaactacaattaataagggtattttagtaaatgatactaattttaccattgaaatcaacacaattaatcatttccttcataac 30190658  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| |||||| ||||||| |||||||||||||||||||    
T  30190657 cgtgcacaaaccttaaacgactattttttagagacgga 30190620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 24569198 - 24569062
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  24569198 tcaacttaactactccactaactacaattaataagggtattttagtaaataatattaattttaccattgaaatcaacacaattaatcattttcttaataa 24569099  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacg 137  Q
    |||| || ||||||||| | |||||  ||||||||||    
T  24569098 tcgtgcataaatcttaagcgactataatttagagacg 24569062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 37695762 - 37695625
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||||    
T  37695762 aacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttccttaataatc 37695663  T
Q  103 gtacac-aaatcttaaacaactattttttagagacgga 139  Q
    || ||| ||| ||||||| |||||| ||||||||||||    
T  37695662 gtgcacaaaaccttaaacgactattatttagagacgga 37695625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 10366746 - 10366603
Alignment:
Q  2 caacttaactacttcactaactacaattaataa-------gagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttct 94  Q
    |||||||||||||||||||||||||||||||||       |||| ||||| |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  10366746 caacttaactacttcactaactacaattaataattaataagagtgttttaataaatgatactaattttaccattgaaatcaacacaattaatcattttct 10366647  T
Q  95 taataatcgtacacaaatcttaaacaactattttttagagacgg 138  Q
    |||||||||| |||||| ||||||| ||| || |||||||||||    
T  10366646 taataatcgtgcacaaaccttaaacgactgttatttagagacgg 10366603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 43253958 - 43253843
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcg 103  Q
    ||||||||||| |||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||||||    
T  43253958 acttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcg 43253859  T
Q  104 tacacaaatcttaaac 119  Q
    | |||||| |||||||    
T  43253858 tgcacaaaccttaaac 43253843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 19823029 - 19823163
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| | |||||||||||||||||||| || ||||||||||||||||||||| ||||||  |||| |||| |||||||||||| |||||||||    
T  19823029 caacttaactattccactaactacaattaataagggtgttttagtaaatgatactaattctaccatcaaaatcaacacaattaatcatttccttaataat 19823128  T
Q  102 cgtacacaaatcttaaacaactattttttagagac 136  Q
    ||| |||||| |||||||||||||  |||||||||    
T  19823129 cgtgcacaaaccttaaacaactataatttagagac 19823163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 27471352 - 27471470
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| |||||  || ||||||||||||| ||||||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  27471352 tcaacttaactactccactacttataattaataagagtgttttagtaaatgcaactaatttcaccattgaaatcaacataattaatcattttcttaataa 27471451  T
Q  101 tcgtacacaaatcttaaac 119  Q
    |||| ||||||||||||||    
T  27471452 tcgtgcacaaatcttaaac 27471470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 8679151 - 8679014
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| || ||||||||||| ||||||||||  | |||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  8679151 caacttaattaattcactaactataattaataaggatcttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataat 8679052  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| || ||||||||||| |||||  ||||||||||||    
T  8679051 cgtgcataaatcttaaacgactataatttagagacgga 8679014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 37311972 - 37312090
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgta 105  Q
    ||||||||| |||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||||||     
T  37311972 ttaactactccactaactacaattaataagggttttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtg 37312071  T
Q  106 cacaaatcttaaacaacta 124  Q
    || ||| ||||||| ||||    
T  37312072 cataaaccttaaacgacta 37312090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 45710868 - 45711002
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||  |||| ||||||||||||||||||||||| ||     
T  45710868 caacttaactactccactaactacaattaataaaagtgttttagtaaatgatattaattttaccatcaaaatcaacataattaatcattttcttaacaac 45710967  T
Q  102 cgtacacaaatcttaaacaactattttttagagac 136  Q
    ||| ||  || ||||||| |||||| |||||||||    
T  45710968 cgtgcatcaaccttaaacgactattatttagagac 45711002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 5323033 - 5322899
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||||||||| ||||| || |||||||||| |||||||||||||||||| |||||||| || |||||| |||||||||||||||||  |||||||||    
T  5323033 aacttaactactttactaattataattaataagtgtattttagtaaatgatattaattttatcactgaaatcaacataattaatcattt--ttaataatc 5322936  T
Q  103 gtacacaaatcttaaacaactattttttagagacgga 139  Q
    || |||||| |||||||||||||  |||| |||||||    
T  5322935 gtgcacaaaccttaaacaactataatttaaagacgga 5322899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 37497510 - 37497655
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||| |||| ||  || ||||||||||||||||||||||||||||  |||| |||| ||| |||||||| |||||||||    
T  37497510 caacttaactactccactaactacagttaacaacggtgttttagtaaatgatactaattttaccatcaaaatcaacacaataaatcatttccttaataat 37497609  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
    ||| || ||||||||||| | |||| |||||||||||||| |||||    
T  37497610 cgtgcataaatcttaaacgattattatttagagacggatggagtat 37497655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 36476603 - 36476739
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||||||||  ||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| |||| ||| ||| ||||||||||||| |    
T  36476603 aacttaactactctactaactacaattaataagggtattttagtaaatgatattaattttaccattgcaatcaacacaatcaattattttcttaataacc 36476702  T
Q  103 gtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||  ||||| |||||||||| ||  ||||||||||||    
T  36476703 gtgaacaaaccttaaacaacaataatttagagacgga 36476739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 53560234 - 53560373
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||||  |||||||| | |||||||| || |||||||||||||||| |||||||||||  |||| ||||||||||||||||| |||||| |    
T  53560234 tcaacttaactactctactaactatatttaataagggtgttttagtaaatgatacaaattttaccatcaaaatcaacataattaatcatttccttaatca 53560333  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacggat 140  Q
    |||| ||  || |||||||||||||| |||||||||||||    
T  53560334 tcgtgcatcaaccttaaacaactattatttagagacggat 53560373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 36460513 - 36460391
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| |||| || |||||||||||||||||| ||||||| |||||| |||||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  36460513 caacttaattactccattaactacaattaataagaatattttaataaatgttactaattttactattgaaattaacacaattaataattttcttaataat 36460414  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    ||| ||||||  |||||| ||||    
T  36460413 cgtgcacaaactttaaacgacta 36460391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 29024062 - 29023926
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| |||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||  |||| |||| ||||||||||||| ||||||||    
T  29024062 caacttaattactccactaactacaattaataaga-tgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttttttaataat 29023964  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| || ||| ||||||| ||||||  |||| ||||||    
T  29023963 cgtgcataaaccttaaacgactattaattagtgacgga 29023926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 138
Target Start/End: Original strand, 11905840 - 11905976
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||| ||| || ||||||||||||||||| ||  ||||||||||||||||||||||| |||  ||||||||| ||||||||||||||||||||||    
T  11905840 caacttaacaactccattaactacaattaataagggtgctttagtaaatgatactaattttatcatcaaaattaacacaattaatcattttcttaataat 11905939  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgg 138  Q
    ||| || |||  |||||| | |||| |||||||||||    
T  11905940 cgtgcataaactttaaacgagtattatttagagacgg 11905976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 19609318 - 19609461
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||| ||||| ||||||| |||| |||||||| |||||| |||||||||| ||||||||| |||||||| |||| || ||||||||||||||| | ||    
T  19609318 aacttatctactccactaacaacaagtaataagaatatttttgtaaatgatattaattttacgattgaaatcaacacaaataatcattttcttaaaattc 19609417  T
Q  103 gtacacaaatcttaaacaactattttttagagacggatgaagta 146  Q
     |||||||||||||||| | |||| ||| |||||||| ||||||    
T  19609418 atacacaaatcttaaacgattattattttgagacggaagaagta 19609461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 28690879 - 28690760
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||  ||||||||||||||||||||   ||||||||||||||||| |||||||||| ||||||| |||| ||||||||||||  ||||||||    
T  28690879 caacttaactatctcactaactacaattaataaagatattttagtaaatgatattaattttaccgttgaaatcaacacaattaatcatttctttaataat 28690780  T
Q  102 cgtacacaaatcttaaacaa 121  Q
    ||| |||||| |||||||||    
T  28690779 cgtgcacaaaccttaaacaa 28690760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 52290910 - 52291056
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| ||||||||| ||||||||||  | ||||| |||||| |||||||||||||||  |||| || | |||||||||||||||||||||    
T  52290910 tcaacttaactactccactaactataattaataaggctgttttaataaatggtactaattttaccatcaaaatcaatacaattaatcattttcttaataa 52291009  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
     ||||||  || ||||||| | |||| |||||||||||| |||||||    
T  52291010 ccgtacatcaaccttaaacgattattatttagagacggaagaagtat 52291056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 44301580 - 44301717
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||  |||| ||||| | |    
T  44301580 caacttaactactccactaattacaattgataagggtattttagtaaatgatactaattttatcattgaaatcaacataattaaatatttccttaaaagt 44301679  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||  |||||| ||||||| || ||| ||| ||||||||    
T  44301680 cgggcacaaaccttaaacgaccattattttgagacgga 44301717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 51838057 - 51837920
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||| |||||||| ||||| |||||| ||||||| |||||||||||||||||| |||||||| ||||||||| |||| |||||||||||| |||||||     
T  51838057 tcaacgtaactactccactagctacaactaataagggtattttagtaaatgatattaattttatcattgaaatcaacacaattaatcatttacttaatac 51837958  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacgg 138  Q
    || | |||||| ||||||  |||||  |||||||||||    
T  51837957 tcatgcacaaaccttaaatgactataatttagagacgg 51837920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 12736665 - 12736545
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgta 105  Q
    ||||||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| ||||  ||| |||| |||||||||||| ||||| ||||||     
T  12736665 ttaactactacactaagtacaattaataagggtattgtagtaaatgatactaattttatcattagaatcaacacaattaatcatttccttaaaaatcgtg 12736566  T
Q  106 cacaaatcttaaacaactatt 126  Q
    ||||||  |||||||||||||    
T  12736565 cacaaactttaaacaactatt 12736545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 19611928 - 19612063
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| ||||||| ||||||||||||  ||||||||||||| ||| |||||||| ||||||||| |||| ||||||||| |||||||| ||||    
T  19611928 aacttaactactccactaacaacaattaataaggatattttagtaaattata-taattttaacattgaaatcaacacaattaatcactttcttaaaaatc 19612026  T
Q  103 gtacacaaatcttaaacaactattttttagagacgga 139  Q
    |||||||||  |||||||| |||| | | ||||||||    
T  19612027 gtacacaaactttaaacaattattatctcgagacgga 19612063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 49830162 - 49830285
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatca-ttttcttaataatcgtacacaaatctt 115  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||| |||||||| |||| ||||||||| |||| ||||||||||| ||||||  ||    
T  49830162 actaactacaattaataatggtattttagtaaatgatattaattttactattgaaatcaacacaattaatcattttttttaataatcgtgcacaaacgtt 49830261  T
Q  116 aaacaactattttttagagacgga 139  Q
    |||| |||||  ||||||||||||    
T  49830262 aaacgactataatttagagacgga 49830285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 23004479 - 23004358
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||| || |||||||| ||  |||||||||||||||||||||  ||| |||||||||||| |||||||||    
T  23004479 caacttaactactccactaactacaattaataagggtgttttagtatatactactaattttaccattgaaatcgacacaattaatcatttccttaataat 23004380  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
     ||| ||||| ||||||| ||||    
T  23004379 agta-acaaaccttaaacgacta 23004358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 37773062 - 37772944
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||| | |||| |||| |||||||||| |||||||||||||||||| |||||||||||||| ||| || | |||||||||||| ||||||||    
T  37773062 tcaacttaactattccactgactataattaataagggtattttagtaaatgatattaattttaccattgtaatcaatacaattaatcatttccttaataa 37772963  T
Q  101 tcgtacacaaatcttaaac 119  Q
    || | |||||| |||||||    
T  37772962 tcatgcacaaaccttaaac 37772944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 38795362 - 38795495
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||| ||| ||| |||||||||||||||| | ||||  ||||||||||||||||||||||||||||| |||| |||||||||||| |||||  ||    
T  38795362 caacttaacaactccaccaactacaattaataagggcatttgggtaaatgatactaattttaccattgaaataaacacaattaatcatttccttaaatat 38795461  T
Q  102 cgtacacaaatcttaaacaactattttttagaga 135  Q
    ||| ||||||  |||||| |||||| ||| ||||    
T  38795462 cgtgcacaaacattaaacgactattattttgaga 38795495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 11632099 - 11632214
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||  | |||||||||||||||||||  || |||||||||||  ||||||||||||| ||||||| |||| ||||||||||||| ||||||||    
T  11632099 caacttaacttttccactaactacaattaataaaggtgttttagtaaatactactaattttaccgttgaaatcaacacaattaatcatttt-ttaataat 11632197  T
Q  102 cgtacacaaatcttaaa 118  Q
    ||| |||||||||||||    
T  11632198 cgtgcacaaatcttaaa 11632214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 17652770 - 17652911
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||| |||||||||||||||||||||  | |||||||||    ||||| |||||||||  |||| |||| |||||||||||| |||||||||    
T  17652770 caacttaactacctcactaactacaattaataaggatgttttagtaa----tactagttttaccatcaaaatcaacacaattaatcatttccttaataat 17652865  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
    ||| || ||| || |||| |||||| |||||||||||||| |||||    
T  17652866 cgtgcataaacctcaaacgactattatttagagacggatggagtat 17652911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 3901246 - 3901151
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||| |||  |||||||||||| |||||||| | ||||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||    
T  3901246 caacttaagtaccccactaactacaactaataagaatgttttagtaaatgatattaattttatcattgaaattaatacaattaatcattttcttaa 3901151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 54477557 - 54477467
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||||||||| || |||||||||||||||| | ||||||||||||||||| ||||||||||||| |||| |||| |||||| |||||    
T  54477557 tcaacttaactactccattaactacaattaataaaaatattttagtaaatgatattaattttaccattaaaatcaacacaattaaccattt 54477467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 3313272 - 3313390
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| |||| || ||||||||||||||||| || ||||||| |||  |||||||||||||||||||||  |||    |||||||||||||||||||    
T  3313272 caacttaaatactccattaactacaattaataagggtgttttagttaattctactaattttaccattgaaatcgaca----taatcattttcttaataat 3313367  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    ||| |||||| ||||||| ||||    
T  3313368 cgtgcacaaaccttaaacgacta 3313390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 14194574 - 14194690
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| |||| ||||||| |||||| |||| |||||||||||||||| ||||||||||| ||||||||| |||| |||| |||||||  |||| |||    
T  14194574 caacttaattactccactaac-acaattcataaaagtattttagtaaatggtactaattttatcattgaaatcaacacaattgatcatttctttaaaaat 14194672  T
Q  102 cgtacacaaatcttaaac 119  Q
    ||| |||||| |||||||    
T  14194673 cgtgcacaaaccttaaac 14194690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 48541098 - 48540973
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||||  ||||| |||||||||||||| ||||||| ||||||||| ||||||||  || |||||| ||||||||| |||||| |||||  |    
T  48541098 tcaacttaactactcaactaattacaattaataagaatattttaataaatgatattaattttattatagaaattgacataattagtcatttccttaaaca 48540999  T
Q  101 tcgtacacaaatcttaaacaactatt 126  Q
    | || ||||||  |||||||||||||    
T  48540998 ttgtgcacaaactttaaacaactatt 48540973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 1778661 - 1778808
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||| ||||| ||||||||||||| ||||||  | ||||||||||||  | |||||||| ||||||||| |||| |||||||||||| |||||||||    
T  1778661 caacttatctactccactaactacaat-aataaggatgttttagtaaatgtcattaattttatcattgaaatcaacacaattaatcatttccttaataat 1778759  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagtatcat 150  Q
    | | |||||| ||||||| |||| | ||  |||||||| | ||||||||    
T  1778760 catgcacaaaccttaaacgactaatattgtgagacggagggagtatcat 1778808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 34750518 - 34750630
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgta 105  Q
    ||||||||| ||| ||||||||||||||||  | ||||||||||||||||||||||||||||| |||| |||| ||| ||||||||  | || ||||||     
T  34750518 ttaactactccaccaactacaattaataaggatgttttagtaaatgatactaattttaccattaaaatcaacacaatcaatcatttcatcaaaaatcgtg 34750617  T
Q  106 cacaaatcttaaa 118  Q
    |||||| ||||||    
T  34750618 cacaaaccttaaa 34750630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 30682163 - 30682068
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||| || | || |||||||||||||||||| ||||||||||||||||||| |||||| |||| ||||||| | |||||||||||| |||||    
T  30682163 caacttaattattccattaactacaattaataagattattttagtaaatgatactcattttaacattaaaattaaaacaattaatcatttccttaa 30682068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 34957522 - 34957656
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||| ||||||| ||||||||| ||||||||||  ||||| ||||||| |||| |||||||||||  || | |||| |||||||||||| |||| ||||     
T  34957522 aactgaactactccactaactataattaataaggatatttaagtaaattatacaaattttaccatcaaattcaacacaattaatcatttccttagtaatt 34957621  T
Q  103 gtacacaaatcttaaacaactattttttagagacg 137  Q
    || || ||| ||||||| |||||| ||||||||||    
T  34957622 gtccataaaccttaaacgactattatttagagacg 34957656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 39043855 - 39043775
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatac---taattttaccattgaaattaaca 78  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||||||||   |||||||||||||||||| ||||    
T  39043855 tcaacttaactactccactaactacaattaataaaggtattttagtaaatgatactattaattttaccattgaaatcaaca 39043775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 50035299 - 50035198
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctta 116  Q
    ||||||||||||||| ||  || |||| ||||||| |||||||||||  |||||||| |||||||||| ||||||||||||||||| | |||||| ||||    
T  50035299 actaactacaattaacaacggtgttttggtaaatgctactaattttattattgaaatcaacataattattcattttcttaataatcatgcacaaacctta 50035200  T
Q  117 aa 118  Q
    ||    
T  50035199 aa 50035198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 54726504 - 54726601
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||| || ||||||||||||||||   | ||||||||||||||| ||||||||||||  |||| |||| | |||||||||||||||||||    
T  54726504 aacttaactactccattaactacaattaataaagatgttttagtaaatgatattaattttaccatcaaaatcaacacatttaatcattttcttaataa 54726601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 43719289 - 43719415
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgta 105  Q
    ||||||||| ||||||||||||||||||||  | ||| ||| ||||||| ||||||||||||| |||| |||| ||||||||||||| ||||| |||||     
T  43719289 ttaactactccactaactacaattaataaggatgtttcagtgaatgata-taattttaccattaaaatcaacacaattaatcattttattaatgatcgtg 43719387  T
Q  106 cacaaatcttaaacaactattttttaga 133  Q
     |||||  |||| | |||||| ||||||    
T  43719388 tacaaactttaaccgactattatttaga 43719415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 12904882 - 12904975
Alignment:
Q  2 caacttaactacttcactaactacaattaataagag-tattttagtaaatgatactaattttaccattgaaattaacataattaatcattttct 94  Q
    |||||||| |||| ||||||||||||||||||| || ||||||  ||||| ||||||||||||  |||||||| |||||||||||| |||||||    
T  12904882 caacttaattactccactaactacaattaataaaagatattttgataaatcatactaattttataattgaaatcaacataattaattattttct 12904975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 45811697 - 45811797
Alignment:
Q  25 caattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaacta 124  Q
    |||||||||| | ||||||| ||||| ||  ||||||||||||| |||| |||||||||||||||||||||||  |||  ||||||| ||||||||||||    
T  45811697 caattaataa-attattttattaaattatgttaattttaccattaaaatcaacataattaatcattttcttaaatatcacacacaaaccttaaacaacta 45811795  T
Q  125 tt 126  Q
    ||    
T  45811796 tt 45811797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 43870904 - 43870836
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaa 72  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||||||| |||||||||| ||| ||||    
T  43870904 acttaactacttcactaactactattaaaaagagtactttagtaaatgaaactaattttatcatagaaa 43870836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 30711108 - 30711189
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||||||  || ||||||||||||||| |||||||| |||| |||| |||||||||||| ||||  |||||||    
T  30711108 taactacaattaataatggtgttttagtaaatgatattaattttatcattaaaatcaacataattaattatttctttaataa 30711189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 141
Target Start/End: Complemental strand, 33491125 - 33491041
Alignment:
Q  57 aattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactattttttagagacggatg 141  Q
    |||||||| |||||||| |||| |||||||||||| |||||||||||| |||||| ||||||| |||| | ||  ||||||||||    
T  33491125 aattttactattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaatattgtgagacggatg 33491041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 31158591 - 31158497
Alignment:
Q  29 taataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaacta 124  Q
    ||||| |||| |||||||||||| || ||||||||| || ||||| | || ||||||||||||| ||||||||||| |||||| ||||||| ||||    
T  31158591 taataggagtgttttagtaaatgttattaattttactatcgaaatcagcacaattaatcatttt-ttaataatcgtgcacaaaccttaaacgacta 31158497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 10973559 - 10973653
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||| ||||||||||| |||||| ||  || | ||||||||||||||  |||||  |||| |||| ||||| |||||||||||||||||||||    
T  10973559 taactatttcactaactataattaacaacggtctattagtaaatgatacacattttgtcattaaaataaacattattaatcattttcttaataat 10973653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 24245186 - 24245109
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataatta 84  Q
    |||||||||| ||||| |||||||||||| | | ||||||||||| ||||||||||||  |||||||| ||||||||||    
T  24245186 ttaactactttactaagtacaattaataata-tgttttagtaaataatactaattttattattgaaatcaacataatta 24245109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 41038490 - 41038448
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtatttta 44  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  41038490 caacttaactacttcattaactacaattaataagagtatttta 41038448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37804802 - 37804843
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattt 42  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  37804802 tcaacttaactacttcactaactacaattaatgagagtattt 37804843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 49447873 - 49447769
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctta 116  Q
    ||||||||||||||||||| ||||||| |||||| ||| || |||   | ||||||| |||| ||||||||||||  ||||| ||||||||||||  |||    
T  49447873 actaactacaattaataagggtattttggtaaataatattatttt---cgttgaaatcaacacaattaatcatttcgttaattatcgtacacaaacatta 49447777  T
Q  117 aacaacta 124  Q
    ||| ||||    
T  49447776 aacgacta 49447769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 33491456 - 33491408
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaat 50  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||    
T  33491456 caacttaactactccactaactataattaataagagtgttttagtaaat 33491408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 52206921 - 52206849
Alignment:
Q  25 caattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||||   ||||||||||||||||| |||||||||||||||||| ||  ||| ||||||||| |||||    
T  52206921 caattaataaatatattttagtaaatgatattaattttaccattgaaatcaatttaactaatcatttccttaa 52206849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 29595815 - 29595724
Alignment:
Q  11 tacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||| ||||| || ||||||||| | ||||||| ||||| ||| ||||||||| ||| |||| || |||||||| ||||||||||| ||||    
T  29595815 tactttactaattataattaataaaaatattttaataaataatattaattttactattaaaatcaatataattaaccattttcttaaaaatc 29595724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 38705194 - 38705266
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatga---tactaattttaccattgaaat 73  Q
    ||||||| ||||  |||||||||||||||||||| || ||||||||||||   |||||||||||||||||||||    
T  38705194 aacttaattactcaactaactacaattaataagaata-tttagtaaatgatagtactaattttaccattgaaat 38705266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 25090127 - 25090049
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    ||||||||||||| |||||| || ||| ||  ||||||| ||| |||||||||  | ||||||||||||||||||||||    
T  25090127 aattaataagagtgttttagaaattgaaacatattttacaattaaaattaacactactaatcattttcttaataatcgt 25090049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 36463043 - 36462945
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||| |||| ||| ||| ||||||||||||  |||||||||||||| ||| ||||||| |||| |||| || |  || ||||||||| |||||||    
T  36463043 caacttaattactccacaaacaacaattaataaggttattttagtaaatgctaccaattttaacattaaaatcaatactatcaatcatttttttaataa 36462945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 151
Target Start/End: Complemental strand, 51064864 - 51064766
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactattttttagagacggatgaagtatcatc 151  Q
    ||||||||||||||||||||  |||| ||||||||||||| |||||| |||| || |||  |||||| |||| | ||  |||||||| |||||| ||||    
T  51064864 tactaattttaccattgaaagcaacacaattaatcatttttttaatattcgtgcataaactttaaacgactaatattatgagacggaggaagtaacatc 51064766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 39931656 - 39931745
Alignment:
Q  11 tacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| |||||||||| || ||||| ||||||||||  ||||| ||||| |||| ||||  |||||| ||||  |||||||    
T  39931656 tacttcactaactataattaataagtgtgttttaataaatgatacatattttgccattaaaatcaacactattaataatttctttaataa 39931745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 42278697 - 42278754
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaat 73  Q
    ||||||||| |||||||| |||| ||||||||||||||  ||||||||| ||||||||    
T  42278697 cactaactataattaatatgagtgttttagtaaatgatgttaattttacgattgaaat 42278754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 38137539 - 38137401
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatg---atactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||||  ||||||||||| ||||||||| |||||||||| |||    |||||||||||| ||||||||  ||| ||| ||| ||||  || ||||||    
T  38137539 ttaactaccccactaactacagttaataagaatattttagtagatgtcagtactaattttactattgaaatcgacacaatgaattatttcatttataatc 38137440  T
Q  103 gtacacaaatcttaaacaactattttttagagacggatg 141  Q
     | |||||| ||||||| |||| | ||  ||||||||||    
T  38137439 atgcacaaaccttaaacgactaatattatgagacggatg 38137401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 44685048 - 44684988
Alignment:
Q  37 gtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||| ||||||||| |||| ||| |||| |||| ||||||||||||||| |||||||    
T  44685048 gtattttaataaatgatattaatattatcattaaaatcaacataattaatcatcttcttaa 44684988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 26467128 - 26467252
Alignment:
Q  3 aacttaactacttcacta--actacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||||| ||  ||||||||||||||   ||||||| ||||||||| |||  ||| |||| |||| |||| ||| |||||||||||||  ||    
T  26467128 aacttaactacttcattataactacaattaataaacatattttaataaatgatattaa-cttatcattaaaatcaacacaatcaatcattttcttacgaa 26467226  T
Q  101 tcgtacacaaatcttaaacaactatt 126  Q
    | ||| | ||| ||||||| ||||||    
T  26467227 ttgtatataaaccttaaacgactatt 26467252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 40194521 - 40194563
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtatttta 44  Q
    ||||| ||||||  |||||||||||||||||||||||||||||    
T  40194521 caactcaactacgccactaactacaattaataagagtatttta 40194563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 48893775 - 48893832
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaa 76  Q
    |||||| ||||||||||||| |||||| ||||||||   ||||||||||| |||||||    
T  48893775 taactataattaataagagtgttttagcaaatgatatatattttaccattaaaattaa 48893832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 20354510 - 20354434
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||||| ||| ||||| || || ||||  |||||| |||| |||||||||  |||||| |||||||||||||||    
T  20354510 aattaataaaagtgttttaatacataatacatattttatcattaaaattaacaatattaattattttcttaataatc 20354434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 23068217 - 23068327
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatacta--att-ttaccattgaaattaacataattaatcattttcttaata 99  Q
    ||||||| || ||||| |||||||||||||||| || ||| ||| |||| |||||  ||| |||||| | |||| |||||||||||| |||||||| |||    
T  23068217 aacttaaatatttcacaaactacaattaataag-gtgtttcagtgaatgctactattattcttaccactaaaatcaacataattaattattttcttgata 23068315  T
Q  100 atcgtacacaaa 111  Q
    ||| | ||||||    
T  23068316 atcatgcacaaa 23068327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 37804765 - 37804793
Alignment:
Q  14 ttcactaactacaattaataagagtattt 42  Q
    |||||||||||||||||||||||||||||    
T  37804765 ttcactaactacaattaataagagtattt 37804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 37804854 - 37804898
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagta 47  Q
    |||||||||||| ||||||| | |||||||||| |||||||||||    
T  37804854 aacttaactactccactaaccataattaataagggtattttagta 37804898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 38512044 - 38512176
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| || ||| |||||| |||||   ||||||| |||||||||  ||||||| |||| |||| || | ||||||| |||||   || ||||    
T  38512044 aacttaactactccaataattacaatcaataaatatattttaataaatgatatcaattttatcattaaaatcaataaaattaattatttttaaaaaaatc 38512143  T
Q  103 gtacacaaatcttaaacaactattttttagaga 135  Q
     ||||||||  |||||| |||||| ||| ||||    
T  38512144 atacacaaactttaaacgactattattttgaga 38512176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 10180046 - 10179908
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| || | || || |||||||||||||||    
T  10180046 tcaacttaactactccactaactacaattaataagtgtattttagtaaattatactaattttaccattgaaatcaatacaactactcattttcttaataa 10179947  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    |||| |||||| ||||||| |||||||||||||||||||    
T  10179946 tcgtgcacaaaccttaaacgactattttttagagacgga 10179908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 31271039 - 31271171
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| |||||| ||||||||||||| |||| |||| ||| ||||||||||||||||||    
T  31271039 caacttaactactccactaactataattaataagagtattttagtatatgatattaattttaccattaaaatcaacacaatcaatcattttcttaataat 31271138  T
Q  102 cgtacacaaatcttaaacaactattttttagag 134  Q
    |||||||||| ||||||| |||||  |||||||    
T  31271139 cgtacacaaaccttaaacgactataatttagag 31271171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 1875685 - 1875568
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtac 106  Q
    |||||| |||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||||||| |    
T  1875685 taactatttcactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgc 1875586  T
Q  107 acaaatcttaaacaacta 124  Q
    ||||| ||||||| ||||    
T  1875585 acaaaccttaaacgacta 1875568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 32476306 - 32476443
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||||||| |||||||| ||||||||| |||| ||| ||||||||||||||||| |    
T  32476306 aacttaactacttcattaactacaattaataagggtattttaataaatgatattaattttatcattgaaatcaacagaatcaatcattttcttaataacc 32476405  T
Q  103 gtacacaaatcttaaacaactattttttagagacggat 140  Q
    || |||||| ||||||| ||| |  |||||||||||||    
T  32476406 gtgcacaaaccttaaacgactttaatttagagacggat 32476443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 17719356 - 17719221
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||||| ||||||| ||||||||| |||| |  | ||||||||||||| ||||||||    
T  17719356 caacttaactactccactaactataattaataaggatattttagtaaataatactaactttaccattaaaatcattacaattaatcatttttttaataat 17719257  T
Q  102 cgtacacaaatcttaaacaactattttttagagacg 137  Q
    ||| |||||||||||||| |||||| ||||||||||    
T  17719256 cgtgcacaaatcttaaacgactattatttagagacg 17719221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 51132 - 51268
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||| || | |||||||||||||||||||  || |||| |||||||||||| ||||||| ||| |||| |||| |||||||||||||||||||||||    
T  51132 aacttaattaatccactaactacaattaataaatgtgtttttgtaaatgatacttattttac-attaaaatcaacacaattaatcattttcttaataatc 51230  T
Q  103 gtacacaaatcttaaacaactattttttagagacggat 140  Q
    || |||||| |||||||||||||| |||||||||||||    
T  51231 gtgcacaaaccttaaacaactattatttagagacggat 51268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 39482635 - 39482755
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcg 103  Q
    ||||||||| | ||||||||| |||||||||| || |||||||||||  ||||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  39482635 acttaactagtccactaactataattaataagggtgttttagtaaattctactaattttacccttgaaatcaacacaattaatcattttcttaataatcg 39482734  T
Q  104 tacacaaatcttaaacaacta 124  Q
    | |||||||||||||| ||||    
T  39482735 tgcacaaatcttaaacgacta 39482755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 7172931 - 7173065
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||||||| ||||||||||||||||   | |||||||||||| ||||||||||| ||||||||| |||| ||||||||||||  |||||||    
T  7172931 tcaacttaactacttcattaactacaattaataaatatgttttagtaaatgctactaattttatcattgaaatcaacacaattaatcatttctttaataa 7173030  T
Q  101 tcgtacacaaatcttaaacaactattttttagaga 135  Q
    |  |||||||| |||||||||||||  ||||||||    
T  7173031 tgatacacaaaccttaaacaactataatttagaga 7173065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 39405779 - 39405925
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| |||| ||||||||  |||||||||   |||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  39405779 tcaacttaattactccactaactgtaattaataaagatattatagtaaatgatactaattttatcattgaaattaacacaattaatcatttccttaataa 39405878  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
    |||| |||||| ||||||| |||| | ||  |||||||||| |||||    
T  39405879 tcgtgcacaaaccttaaacgactaatattgtgagacggatggagtat 39405925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 21216199 - 21216082
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||||||||  |||||||||||||||||||| |||| |||||||||||| |||||||||    
T  21216199 caacttaactactccactaactacaattaataaggatgttttagtaaatgcaactaattttaccattgaaatcaacacaattaatcatttccttaataat 21216100  T
Q  102 cgtacacaaatcttaaac 119  Q
    | | |||||| |||||||    
T  21216099 catgcacaaaccttaaac 21216082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 42972592 - 42972490
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctt 115  Q
    ||||||||| |||||||||| ||||||||||||| |||| |||||||||||||||||| || | ||||||||||||||||||||||||| |||||| |||    
T  42972592 cactaactataattaataagggtattttagtaaacgatattaattttaccattgaaatcaaaacaattaatcattttcttaataatcgtgcacaaacctt 42972493  T
Q  116 aaa 118  Q
    |||    
T  42972492 aaa 42972490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 396704 - 396611
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||| |||||||||||||||||  |||| ||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  396704 taactacttcattaactacaattaataaggatattgtagtaaatgatactaattttaccgttgaaatcaacataattaatcatttccttaataa 396611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 39301018 - 39300917
Alignment:
Q  23 tacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaac 122  Q
    |||||||||| || || ||||||||||||||| |||||||||||| ||||| |||||||||||||||||  |||||||||||||||||||||||||| ||    
T  39301018 tacaattaattagggttttttagtaaatgatattaattttaccatcgaaatcaacataattaatcatttctttaataatcgtacacaaatcttaaacgac 39300919  T
Q  123 ta 124  Q
    ||    
T  39300918 ta 39300917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 44761592 - 44761503
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||| ||||||||||||    
T  44761592 caacttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcattt 44761503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 9300212 - 9300092
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| ||||||||| |||||||||| || |||||||||||| || ||||||||||||| |||| |||| ||  |||||||||||||||||    
T  9300212 tcaacttaactactccactaactaaaattaataagggtgttttagtaaatgctattaattttaccattaaaatcaacacaaacaatcattttcttaataa 9300113  T
Q  101 tcgtacacaaatcttaaacaa 121  Q
    |||| || ||| |||||||||    
T  9300112 tcgtgcataaaccttaaacaa 9300092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 34948785 - 34948641
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||  || |||  |||||||||||||||||||| ||| |||| |||| |||||||||||| |||||||||    
T  34948785 caacttaactactccactaactacaattaataaatgtgtttctgtaaatgatactaattttactatttaaatcaacacaattaatcatttccttaataat 34948686  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagta 146  Q
     ||  ||||||||||||| | |||| || | ||||||||| ||||    
T  34948685 tgtgtacaaatcttaaacgattattattcaaagacggatggagta 34948641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 45425764 - 45425642
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| |||| ||||||||||||||||||||| | ||||| |||||| || ||||||||||||| |||| |||| ||||||||||||||||||||||    
T  45425764 caacttaattactccactaactacaattaataagaatgttttaataaatgttattaattttaccattaaaatcaacacaattaatcattttcttaataat 45425665  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    | | || ||| ||||||| ||||    
T  45425664 catgcataaaacttaaacgacta 45425642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 10098089 - 10097952
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||| || || |||||||||||| ||||||||||||  |||| || | |||||||||||||||||||||     
T  10098089 caacttaactactccactaactacaattaataagggtgttatagtaaatgatattaattttaccatcaaaatcaatacaattaatcattttcttaataac 10097990  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    | | ||  || ||||||| |||||| |||||| |||||    
T  10097989 catgcatcaaccttaaacgactattatttagatacgga 10097952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 11977033 - 11976912
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||||||| |||| ||| |||||||||||| |||| ||||||| |||| | ||||||||    
T  11977033 aacttaactactctactaactacaattaataagggtattttagtaaatgctactgattataccattgaaatcaacacaattaatgatttccataataatc 11976934  T
Q  103 gtacacaaatcttaaacaacta 124  Q
     | |||||| ||||||| ||||    
T  11976933 atgcacaaaccttaaacgacta 11976912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 40996463 - 40996318
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||| | |||||||||||||||||||||| || ||||||||||||| |||||||||||  |  |||| |||| |||||||||||| ||||| |||    
T  40996463 caacttaaccatttcactaactacaattaataagggtgttttagtaaatgaaactaattttacattcaaaatcaacacaattaatcatttccttaacaat 40996364  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
     || || ||| ||||||| | |||| |||||||||||||| |||||    
T  40996363 tgtgcataaaccttaaacgattattatttagagacggatggagtat 40996318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 4428448 - 4428317
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||| |||||||||||||||||||||  |||||||||||||||||| |||||||| |||| |||| |||| || ||||||||||||||| |||     
T  4428448 aacttaactaattcactaactacaattaataattgtattttagtaaatgataataattttatcattaaaatcaacacaaataatcattttcttaaaaat- 4428350  T
Q  103 gtacacaaatcttaaacaactattttttagaga 135  Q
     |||| ||| ||||||| |||||| ||| ||||    
T  4428349 atacataaaccttaaacgactattattttgaga 4428317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 7703230 - 7703130
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactat 125  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||| |||| ||||||| |||| |||||||||| ||||||||  |||||| |||||    
T  7703230 aattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaattaattatttccttaataatcttacacaaactttaaacgactat 7703131  T
Q  126 t 126  Q
    |    
T  7703130 t 7703130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 22771933 - 22771788
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||| ||| ||||||||||||||||||||||||| || ||||| ||||||| ||||||||||||||  |||| |||  ||||||||| || ||||||||     
T  22771933 caacataattacttcactaactacaattaataagggtgttttaataaatgacactaattttaccatcaaaatcaacccaattaatcaattccttaataac 22771834  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
     || || ||| ||||||| |  ||| ||||||||||||||||||||    
T  22771833 tgtgcataaaccttaaacgataattatttagagacggatgaagtat 22771788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 41092028 - 41092121
Alignment:
Q  18 ctaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaa 111  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||| |||  |||| |||||| ||||||    
T  41092028 ctaactacaattaataagagtattttaataaatgatattaattttaccattgaaatcaacacaattaatcgtttctttaaaaatcgttcacaaa 41092121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 13335235 - 13335367
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||||||||  ||||||| ||||||||||  || ||||| ||||||||||||||||||||||  |||| |||| |||||| ||||| ||||||||||    
T  13335235 aacttaactactctactaactgcaattaataaatgtgttttactaaatgatactaattttaccatcaaaatcaacacaattaaccatttccttaataatc 13335334  T
Q  103 gtacacaaatcttaaacaactattttttagaga 135  Q
    || || ||| ||||||| | |||| ||||||||    
T  13335335 gtgcataaaccttaaacgattattatttagaga 13335367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 17823939 - 17824060
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||| ||||||||||||| ||||||||| ||||  ||||| | ||| ||||| |||    
T  17823939 caacttaactacttcactaactacaattaataaaggtattctagtaaaagatactaattttatcattgaaatcaacacgattaa-cttttccttaaaaat 17824037  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
      |||||||| ||||||| ||||    
T  17824038 aatacacaaaccttaaacgacta 17824060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 31082637 - 31082759
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||| |||||||||| || |||||||||||   |||||||||| |||| |||| || | |||||||||||| |||||| ||    
T  31082637 caacttaactactccactaactataattaataagggtgttttagtaaataccactaattttatcattaaaatcaagacaattaatcatttccttaattat 31082736  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    ||| |||||| | ||||||||||    
T  31082737 cgtgcacaaaccataaacaacta 31082759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 42887018 - 42887104
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatca 88  Q
    ||||||||||||  |||||||||||||||||||  |||||||||||||||||||||||||| | |||||||| |||| |||||||||    
T  42887018 caacttaactacgccactaactacaattaataaaggtattttagtaaatgatactaattttgctattgaaatcaacacaattaatca 42887104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 33765690 - 33765794
Alignment:
Q  14 ttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatc 113  Q
    ||||| ||||||||||||||| ||||| ||||||||||||| ||||||||  ||| |||| ||||||||||||||||| ||||| ||| || |||||| |    
T  33765690 ttcaccaactacaattaataaaagtatattagtaaatgatagtaattttagtattaaaatcaacataattaatcatttccttaaaaattgtgcacaaacc 33765789  T
Q  114 ttaaa 118  Q
    |||||    
T  33765790 ttaaa 33765794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 5053247 - 5053156
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||| | ||||||||||||||||||| | ||||||||||||||| ||||||||||||  |||| |||| |||||||||||| |||||    
T  5053247 ttaactactccgctaactacaattaataagactgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttccttaa 5053156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 26626203 - 26626088
Alignment:
Q  9 actacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacac 108  Q
    |||||| ||||||||||||||||||||  ||||||| ||||| |||| |||||||||||  || | |||| |||||||||||| |||||||||||| ||     
T  26626203 actactccactaactacaattaataaggatattttaataaattatacaaattttaccatcaaattcaacacaattaatcatttccttaataatcgtgcat 26626104  T
Q  109 aaatcttaaacaacta 124  Q
    ||| ||||||| ||||    
T  26626103 aaaccttaaacgacta 26626088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 27294157 - 27294023
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| |||| |||||||| ||||||||||   |||||||||||| ||||||||||||| |||| |||| |||| ||||||| | ||  |||| |||    
T  27294157 caacttaattactccactaactgcaattaataaatatattttagtaaaagatactaattttatcattcaaatgaacacaattaataacttctttaaaaat 27294058  T
Q  102 cgtacacaaatcttaaacaactattttttagagac 136  Q
    ||| |||||| ||||| |||||||| ||| |||||    
T  27294057 cgtgcacaaaccttaaccaactattattttgagac 27294023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 31231748 - 31231846
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||| |||||||||||||||||||| || ||| ||||||||||| ||||||||||||  ||||  ||| |||| ||||||| ||||||||    
T  31231748 caacttaactactccactaactacaattaataagggtgtttcagtaaatgatattaattttaccatcaaaatcgacacaattcatcatttccttaataa 31231846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 34394035 - 34393914
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    |||||| |||||||||  || ||||||||||| ||||||||||||||||  |||| |||| |||||||||||| |||||||| ||| ||  ||  |||||    
T  34394035 taactataattaataaaggtgttttagtaaattatactaattttaccatcaaaatcaacacaattaatcatttccttaataaccgtgcatcaactttaaa 34393936  T
Q  119 caactattttttagagacggat 140  Q
    | |||||| |||||||||||||    
T  34393935 cgactattatttagagacggat 34393914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 39329065 - 39329153
Alignment:
Q  30 aataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    |||||| ||||||||  ||| ||||||||||||| |||| ||||||||| |||||||||||||||||| ||| ||||||||| ||||||    
T  39329065 aataagggtattttaaaaaacgatactaattttatcattaaaattaacacaattaatcattttcttaaaaattgtacacaaaacttaaa 39329153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 31331426 - 31331521
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||| ||||||||||||||||||||||||   ||||||||||||| ||| ||||||||  |||||||| || | |||||||||||| |||||    
T  31331426 caacttaattacttcactaactacaattaataatgatattttagtaaataataataattttataattgaaatcaatacaattaatcatttccttaa 31331521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 36967417 - 36967508
Alignment:
Q  40 ttttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactatttttta 131  Q
    ||||||||||||||| ||||||||||||  |||| |||| |||||||||||| |||||||||||| || ||| ||||||| |||||| ||||    
T  36967417 ttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcataaaccttaaacgactattattta 36967508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 2767375 - 2767253
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctt 115  Q
    |||||||||||| |||||||  | ||||| ||||||||||||||||||||||  |||| |||| ||||||| |||| |||||||| ||| ||  || ||     
T  2767375 cactaactacaaataataaggatgttttaataaatgatactaattttaccatcaaaatcaacacaattaattatttccttaataaccgtgcatcaacctc 2767276  T
Q  116 aaacaactattttttagagacgg 138  Q
    ||||||||| | |||||||||||    
T  2767275 aaacaactactatttagagacgg 2767253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 40028531 - 40028632
Alignment:
Q  3 aacttaactacttcactaacta----caattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaat 98  Q
    ||||||| ||||||||||||||    ||||||||||   ||||||| |||||| || |||||||||||||||||| |||||||||||||||||| |||||    
T  40028531 aacttaattacttcactaactaaatacaattaataatgatattttaataaatgctattaattttaccattgaaatcaacataattaatcatttt-ttaat 40028629  T
Q  99 aat 101  Q
    |||    
T  40028630 aat 40028632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 4924166 - 4924070
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||||||||  | ||||||||||||||||   ||||||||||||| ||||||||||||||||| ||||  ||| || |||| ||||||||||    
T  4924166 tcaacttaactactctattaactacaattaataaagatattttagtaaataatactaattttaccattaaaatatacacaactaataattttcttaa 4924070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 1739709 - 1739772
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctta 116  Q
    ||||||||||||||||||||| |||| ||||||| |||| ||||||||||||||||||| ||||    
T  1739709 tactaattttaccattgaaatcaacacaattaattatttccttaataatcgtacacaaacctta 1739772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 14855027 - 14854916
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtac 106  Q
    |||||||| |||||||||||||||||||  || |||||| |||||  | ||||||||||||| |||| |||| ||| | |||||||||| ||||||||      
T  14855027 taactactccactaactacaattaataaaggtgttttagcaaatgcaattaattttaccattaaaatcaacacaatgattcattttcttgataatcgtgt 14854928  T
Q  107 acaaatcttaaa 118  Q
    ||||| ||||||    
T  14854927 acaaaccttaaa 14854916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 6611767 - 6611817
Alignment:
Q  54 actaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  6611767 actaattttaccattgaaatcaacataattaatcatttttttaataatcgt 6611817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 34057716 - 34057626
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    ||||||||||| |||||||||||||| ||| ||   ||||||||||||| |||||| |||||  |||||||| |||||||||||| |||||    
T  34057716 caacttaactatttcactaactacaaataacaacgatattttagtaaataatactagttttattattgaaatcaacataattaattatttt 34057626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 44648621 - 44648540
Alignment:
Q  11 tacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    |||| |||||| |||||||| ||||  | |||||||||||||||||||||||||||||||||| |||  || ||||||||||    
T  44648621 tactccactaattacaattagtaagtatgttttagtaaatgatactaattttaccattgaaatcaactaaactaatcatttt 44648540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 29226278 - 29226208
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaact 123  Q
    |||||||||||||||  |||| |||| ||||||||||||||||||||||  | || |||||||||||||||    
T  29226278 tactaattttaccatcaaaatcaacacaattaatcattttcttaataattatgcataaatcttaaacaact 29226208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 32678421 - 32678475
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatact 56  Q
    ||||||||||||| ||||||||||||||||||||  | |||||||||||||||||    
T  32678421 caacttaactactccactaactacaattaataaggatgttttagtaaatgatact 32678475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 21649385 - 21649312
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactatt 126  Q
    ||||| ||||| ||||| ||| ||||||||||| ||||||||||| ||| ||||||||| ||||||||| ||||    
T  21649385 tactagttttatcattggaatcaacataattaaacattttcttaaaaattgtacacaaaccttaaacaattatt 21649312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 1739565 - 1739613
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgata 54  Q
    |||||||||| |||||||||||||||||||| |||||| ||||||||||    
T  1739565 ttaactacttaactaactacaattaataagaatattttggtaaatgata 1739613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 35732140 - 35732192
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatac 55  Q
    ||||| |||||| |||||| ||||||||||| |||||||||||||||||||||    
T  35732140 aactttactactccactaattacaattaataggagtattttagtaaatgatac 35732192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 36006984 - 36006840
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatt-ttcttaataat 101  Q
    ||||||| |||  |||||||||||||||||| |  ||||||||| ||| ||| |||||||| |||| |||| |||| || |||| ||| || || | |||    
T  36006984 aacttaattaccccactaactacaattaatagggatattttagtcaataatattaattttatcattaaaatcaacacaactaattattattttttaaaat 36006885  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagta 146  Q
    ||| |||||| |||| |||| |||| ||| |||||||| ||||||    
T  36006884 cgtgcacaaaccttagacaattattattttgagacggaggaagta 36006840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 39466131 - 39466063
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaatt 74  Q
    ||||||||| ||||||| || ||||||||   |||||||||||||||||||||||||| |||| |||||    
T  39466131 ttaactactgcactaaccacgattaataaagatattttagtaaatgatactaattttagcattaaaatt 39466063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 29226625 - 29226578
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaat 50  Q
    |||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  29226625 aacttaactactccactaactacaattaataagagtgttttaataaat 29226578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 3117111 - 3117029
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||| || |||||| |||||| ||| || ||||||||||||| ||  |||||||||||||||| ||||  |||||||||||    
T  3117111 taactactccattaactataattaacaagggtgttttagtaaatgacac--attttaccattgaaatcaacactattaatcattt 3117029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 5356618 - 5356706
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||| || | || |||||||||||||||| ||||  ||||||||||||| |||||||| |||| |||| |||| || |||||||||    
T  5356618 caacttaattattccattaactacaattaataa-agtacattagtaaatgatattaattttatcattaaaatcaacacaactaatcattt 5356706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 139
Target Start/End: Complemental strand, 6796099 - 6796006
Alignment:
Q  46 taaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||||||||| ||||||||||||| |||| |||    ||||||||||| ||||||||||| ||||||  |||||| |||||  |||| |||||||    
T  6796099 taaatgatattaattttaccattaaaatcaacgctgttaatcattttattaataatcgtgcacaaacattaaacgactataatttaaagacgga 6796006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 146
Target Start/End: Original strand, 32678787 - 32678880
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactattttttagagacggatgaagta 146  Q
    ||||| |||||||||  |||| |||| |||||||||||| ||||||||||||  | |||  |||||| |||||| |||||||| | ||||||||    
T  32678787 tactagttttaccatcaaaatcaacacaattaatcatttccttaataatcgtgtataaactttaaacgactattatttagagatgcatgaagta 32678880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 12559635 - 12559734
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactat 125  Q
    ||||||||| | |||||||||||||| || ||||||||  ||| |||| |||| ||||||||| |||||||| ||||||| | || | |||||| |||||    
T  12559635 aattaataaaaatattttagtaaatggtattaattttattattaaaatcaacacaattaatca-tttcttaaaaatcgtatataatttttaaacgactat 12559733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 7672424 - 7672342
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaata 99  Q
    |||||||| ||||||||||  ||||||||||||| | ||  ||||||| ||| |||| |||||  ||||| ||||||||||||    
T  7672424 actaactataattaataaggatattttagtaaataaaacacattttactattaaaatcaacatttttaataattttcttaata 7672342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 9839909 - 9839791
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctta 116  Q
    |||||||| ||||||| |  |||||||| ||||| |||||||||||| | ||||||| || | | |||||||||| ||||| ||| ||| | |||  |||    
T  9839909 actaactataattaatgaatgtattttaataaataatactaattttatcgttgaaatcaaaacatttaatcatttccttaaaaattgtatataaacatta 9839810  T
Q  117 aacaactattttttagaga 135  Q
    ||| |||||| ||| ||||    
T  9839809 aacgactattattttgaga 9839791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 39301055 - 39301021
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataag 35  Q
    |||||| ||||||||||||||||||||||||||||    
T  39301055 tcaactgaactacttcactaactacaattaataag 39301021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 6323418 - 6323334
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||| || ||||||||| ||||| |||||||||||||| |  |||| |||| |||| || || |||||||||||| ||||||||    
T  6323418 cactaattataattaataaaagtatgttagtaaatgatac-atatttatcattaaaatcaaaattattaatcatttttttaataat 6323334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 5879073 - 5878993
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctta 96  Q
    ||||||| | |||||||||  || ||||||| ||||||||  ||||||||||| |||| ||||  ||||||||||| ||||    
T  5879073 cactaaccataattaataaatgtgttttagtgaatgatacatattttaccattaaaatcaacaatattaatcatttcctta 5878993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 12559582 - 12559622
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtatttt 43  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  12559582 aacttgactagttcactaactacaattaataagaatatttt 12559622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 15810063 - 15809985
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||| ||||| ||| ||||||||||| ||| ||||| ||||||| |||| |||  || |||||||||||||||    
T  15810063 actaactacaat-aataa-agtgttttagtaaataatattaattctaccattaaaatcaactgaactaatcattttcttaa 15809985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 5e-46; HSPs: 88)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 39864129 - 39864266
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  39864129 caacttaactactccactaactacaattaataagagtattttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataat 39864228  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| ||||||  |||||| |||||  ||||||||||||    
T  39864229 cgtgcacaaactttaaacgactataatttagagacgga 39864266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 26093413 - 26093545
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||| |||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  26093413 aacttaattacttcactaactacaattaataaggatattttaataaatgatattaattttaccattgaaatcaacacaattaatcattttcttaataatc 26093512  T
Q  103 gtacacaaatcttaaacaactattttttagaga 135  Q
    || |||||||||||||| || ||| ||||||||    
T  26093513 gtgcacaaatcttaaacgaccattatttagaga 26093545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 917042 - 917187
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| |  ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| |||||||||||||||||  ||||||||    
T  917042 caacttaactaatctactaactacaattaataagggtattttagtaaatgatattaattttaccatttaaatcaacataattaatcatttatttaataat 917141  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
    ||| |||||| ||||||| |||||  ||||||| ||||||||||||    
T  917142 cgtgcacaaaccttaaacgactataatttagaggcggatgaagtat 917187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 6160560 - 6160425
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| |||||||||||||||||| ||    
T  6160560 tcaacttaactattccattaactacaattaataagagtattttagtaaataatactaattttatcattgaaatcaacacaattaatcattttcttaaaaa 6160461  T
Q  101 tcgtacacaaatcttaaacaactattttttagagac 136  Q
    |||||||||| || ||||| |||||| ||| |||||    
T  6160460 tcgtacacaagtcgtaaacgactattattttgagac 6160425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 49224086 - 49223949
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||  |||| |||| ||||||||||||||||| |||     
T  49224086 caacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcattttcttagtaac 49223987  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| ||  |||||||||| |||||| ||||||||||||    
T  49223986 cgtgcatcaatcttaaacgactattatttagagacgga 49223949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 16395145 - 16395010
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||  |||| |||| |||||||||||||||||||||||    
T  16395145 aacttaactactccactaactacaattaaaaag-gtattttagtaaatgatactaattttactatcaaaatcaacacaattaatcattttcttaataatc 16395047  T
Q  103 gtacacaaatcttaaacaactattttttagagacgga 139  Q
    || || ||| ||||||| ||||||||| | |||||||    
T  16395046 gtgcataaaccttaaacgactatttttaaaagacgga 16395010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 12039100 - 12039222
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| |||| || |||||||||||||||||||| | |||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  12039100 caacttaaatactccattaactacaattaataagagtgtattagtaaatgttactaattttaccattgaaatcaacacaattaatcatttccttaataat 12039199  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    ||| |||||| ||||||| ||||    
T  12039200 cgtgcacaaaccttaaacgacta 12039222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 31978753 - 31978615
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| || |||||| ||||||||||| || |||||||| ||||| |||||||||||||||||| |||| |||||||| ||||||||||||    
T  31978753 tcaacttaactactccattaactataattaataagaatagtttagtaagtgatattaattttaccattgaaatcaacacaattaatctttttcttaataa 31978654  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    |||| ||||||  |||||| |||||  ||||||||||||    
T  31978653 tcgtgcacaaactttaaacgactataatttagagacgga 31978615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 31042814 - 31042931
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| |||||||||| |||||||||||||| |||||  |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  31042814 tcaacttaattacttcactacctacaattaataagggtattacagtaaatgatactaattttaccattgaaatcaacacaattaatcatttccttaataa 31042913  T
Q  101 tcgtacacaaatcttaaa 118  Q
    || | |||||| ||||||    
T  31042914 tcatgcacaaaccttaaa 31042931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 7759232 - 7759335
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||| ||||||| ||||| |||||||    
T  7759232 tcaacttaactattccactaactacaattaataagagtattttagtaaatgatattaatttcaccattgaaatcaacacaattaattatttttttaataa 7759331  T
Q  101 tcgt 104  Q
    ||||    
T  7759332 tcgt 7759335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 2572486 - 2572623
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| |||||||||||||||||||  |||||| ||||||||||| |||||||||||||||||| || | ||||||||||| | |||||||    
T  2572486 tcaacttaactactccactaactacaattaataattgtattt-agtaaatgatattaattttaccattgaaatcaatacaattaatcattattttaataa 2572584  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    |||||||||||  |||||| |||||  |||| |||||||    
T  2572585 tcgtacacaaactttaaacgactataatttaaagacgga 2572623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 12151194 - 12151311
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||| || ||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||| |||||||||||| || | |||||||||    
T  12151194 caacttaactgctccactaactacaattaattacaatattttagtaaatgatactaattttatcattgaaatcaacataattaataatctccttaataat 12151293  T
Q  102 cgtacacaaatcttaaac 119  Q
    | |||||||| |||||||    
T  12151294 catacacaaaccttaaac 12151311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 28749024 - 28749125
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctta 116  Q
    ||||| ||||||||||||| || |||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||||||| |||||||||||    
T  28749024 actaattacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaatctta 28749123  T
Q  117 aa 118  Q
    ||    
T  28749124 aa 28749125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 20209940 - 20209842
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||||||| ||  |||| ||||||||||||||||||||||||||    
T  20209940 caacttaactactccactaactacaattaataaggatgttttagtaaatgatactaattttactatcaaaatcaacataattaatcattttcttaataa 20209842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 24880899 - 24880993
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| |||||||| | |||||||    
T  24880899 taactactccactaactacaattaataaaagtattttagtaaatgatattaattttaccattgaaatcaacataatcaatcatttccgtaataat 24880993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 36701940 - 36702034
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||| | | |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  36701940 aacttaacgattccactaactacaattaataagggcattttagtaaatgatactaattttaccattgaaatcaacataattaatcatttccttaa 36702034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 36718044 - 36718138
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||| | | |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  36718044 aacttaacgattccactaactacaattaataagggcattttagtaaatgatactaattttaccattgaaatcaacataattaatcatttccttaa 36718138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 32970667 - 32970550
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| || || |||||| |||||||||| |||||||||||||||| ||| |||||||| ||||||||| |||| ||||||||||||||||||||||    
T  32970667 caacttaattattttactaacaacaattaatacgagtattttagtaaataatattaattttatcattgaaatcaacacaattaatcattttcttaataat 32970568  T
Q  102 cgtacacaaatcttaaac 119  Q
    |||| || || |||||||    
T  32970567 cgtatacgaaccttaaac 32970550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 40144947 - 40144814
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| || ||||||||||||||||| || ||||||||||||||| ||||||||||||  |||| |||| |||||||||||||||||||||     
T  40144947 caacttaactactccattaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcattttcttaataac 40144848  T
Q  102 cgtacacaaatcttaaacaactattttttagaga 135  Q
     || ||  |||||| ||| |||||| ||||||||    
T  40144847 tgtgcatcaatcttgaacgactattatttagaga 40144814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 15699140 - 15699276
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatca-ttttcttaataa 100  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||| ||||||||||||  |||| |||| ||||||||| ||||||||||||    
T  15699140 caacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttttcttaataa 15699239  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacg 137  Q
      || ||  || ||||||| |||||| ||||||||||    
T  15699240 ctgtgcatcaaccttaaacgactattatttagagacg 15699276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 23169091 - 23168971
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcg 103  Q
    ||||||||| || |||||||| ||||||||||  | |||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  23169091 acttaactatttaactaactataattaataaggatgttttagtaaatgctactaattttaccattgaaatcaacacaattaattattttcttaataatcg 23168992  T
Q  104 tacacaaatcttaaacaacta 124  Q
    | ||||||  |||||| ||||    
T  23168991 tgcacaaactttaaacgacta 23168971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 34031613 - 34031489
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctt 115  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||||| ||| |||| || ||||||||| |||||||||| | |||||| |||    
T  34031613 cactaactacaattaataacggtattttagtaaatgatattaattttaccattggaatcaacacaagtaatcatttccttaataatcatgcacaaacctt 34031514  T
Q  116 aaaca-actattttttagagacgga 139  Q
    ||||| |||||  ||||||||||||    
T  34031513 aaacagactataatttagagacgga 34031489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 10495857 - 10495975
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||||||||||  |||| |||| ||||||| ||||| ||||||||    
T  10495857 caacttaactactccactaattacaattaataa-agtgttttagtaaatgatactaattttaccatcaaaatcaacaaaattaataatttttttaataat 10495955  T
Q  102 cgtacacaaatcttaaacaa 121  Q
    | |||| ||| |||||||||    
T  10495956 cttacataaaccttaaacaa 10495975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 33733347 - 33733221
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctta 116  Q
    |||||||||||||||||| |||||||||||||||| || |||||||||||||||||| |||| || ||||||||| |||||||||||| ||||||  |||    
T  33733347 actaactacaattaataaaagtattttagtaaatgttaataattttaccattgaaatcaacacaa-taatcatttccttaataatcgtgcacaaacttta 33733249  T
Q  117 aacaactattttttagagacggatgaag 144  Q
    ||| |||||  ||| |||||||| ||||    
T  33733248 aacgactataatttggagacggaagaag 33733221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 9307645 - 9307767
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||| ||| || |||||||||||| || |||||||| ||||||||| |||| | |||||||||| |||||||||    
T  9307645 caacttaactactccactaactacaattaacaagggtgttttagtaaatgctattaattttatcattgaaatcaacacagttaatcatttccttaataat 9307744  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    |||  ||||| ||||||| ||||    
T  9307745 cgtgtacaaaccttaaacgacta 9307767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 11449920 - 11450038
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    ||||||||||||||||  || || ||| |||| ||  |||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||| ||||||    
T  11449920 taactacaattaataaatgtgttatagaaaattat--taattttaccattgaaatcaacataattaaccatttccttaataatcgtgcacaaaccttaaa 11450017  T
Q  119 caactattttttagagacgga 139  Q
    |||||||| ||||||||||||    
T  11450018 caactattatttagagacgga 11450038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 41121919 - 41121785
Alignment:
Q  8 aactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttc---ttaataatcgt 104  Q
    ||||||| |||||||||||||||||||| |||||||||||||| || |||||||||||||  |||| |||| |||||||||||| |   |||||||  ||    
T  41121919 aactactccactaactacaattaataagggtattttagtaaattatgctaattttaccatcaaaatcaacacaattaatcatttcctaattaataaatgt 41121820  T
Q  105 acacaaatcttaaacaactattttttagagacgga 139  Q
     || ||| |||||||||||||| ||||||||||||    
T  41121819 gcataaaccttaaacaactattatttagagacgga 41121785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 42410027 - 42410147
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctta 116  Q
    ||||||||||||||||||| ||  |||||||||||||| ||||||||||||  |||| |||| ||||||||||||| ||||||| ||| ||  || ||||    
T  42410027 actaactacaattaataagggtgctttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttttttaataaccgtgcatcaacctta 42410126  T
Q  117 aacaactattttttagagacg 137  Q
    |||||||||| ||||||||||    
T  42410127 aacaactattatttagagacg 42410147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 8896432 - 8896337
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||| ||| |||||||||||||||||||   ||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||||||||    
T  8896432 caacttaaccactccactaactacaattaataaatatattttagtaaatgatattaattttaccattgaaatcaacacaatcaatcattttcttaa 8896337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 14757693 - 14757610
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaat 86  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||| |||| |||||||    
T  14757693 aacttaactacttcactaactacaattaataagagtgttttagtaaatgttactaattttatcgttgaaatcaacacaattaat 14757610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 37506141 - 37506282
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatga---tactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||||||||   ||||||||||| |||  |||| |||| |||||||||||| |||||    
T  37506141 tcaacttaactactccactaactacaattaataaaagtgttttagtaaatgatagtactaattttatcatcaaaatcaacacaattaatcatttccttaa 37506240  T
Q  98 taatcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| ||| ||  || ||||||| | |||| ||||||||||||    
T  37506241 taaccgtgcatcaaccttaaacgattattatttagagacgga 37506282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 30755040 - 30754918
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||| ||||||||||| |||||||||   ||||||||||||| |||  ||||||||| || |||| |||| |||||||||||| ||||||||||    
T  30755040 aacttaactatttcactaactataattaataatgatattttagtaaataatataaattttacccttaaaatcaacacaattaatcatttccttaataatc 30754941  T
Q  103 gtacacaaatcttaaacaactat 125  Q
    || || ||||||||||| |||||    
T  30754940 gtgcataaatcttaaacgactat 30754918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 44761632 - 44761522
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||| | | ||||||||| |||||||||   ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||| |||    
T  44761632 tcaacttaaccattccactaactataattaataaagatattttagtaaatgatattaattttatcattaaaattaacataattaatcatttttttattaa 44761533  T
Q  101 tcgtacacaaa 111  Q
    || ||||||||    
T  44761532 tcatacacaaa 44761522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 52429361 - 52429479
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| |||||||||||||||||||| |||||||| ||||||| | ||| |||||||| | ||| |||  |||||||||||| ||| ||||    
T  52429361 tcaacttaactactccactaactacaattaataagggtattttaataaatgacattaaatttaccatcgtaatcaaccaaattaatcatttccttcataa 52429460  T
Q  101 tcgtacacaaatcttaaac 119  Q
    |||| |||||| |||||||    
T  52429461 tcgtgcacaaaccttaaac 52429479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 38787363 - 38787495
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgta 105  Q
    ||||||||| ||||||||| ||||||||||  | |||| | ||||||||||| |||||||||  |||| |||| ||| |||||||| ||||||||||||     
T  38787363 ttaactactccactaactataattaataaggatgttttggcaaatgatactagttttaccatcaaaatcaacacaatcaatcatttccttaataatcgtg 38787462  T
Q  106 cacaaatcttaaacaactattttttagagacgg 138  Q
    || ||| ||||||| |||||| |||||||||||    
T  38787463 cataaaccttaaacgactattatttagagacgg 38787495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 45331376 - 45331492
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||||  |||| |||||||||||| ||||||||||||| ||| |   || ||||||    
T  45331376 taactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacataattaattattttcttaataaccgtgcgtcaaccttaaa 45331475  T
Q  119 caactattttttagaga 135  Q
    | |||||| ||||||||    
T  45331476 cgactattatttagaga 45331492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 153
Target Start/End: Complemental strand, 5179491 - 5179348
Alignment:
Q  10 ctacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacaca 109  Q
    ||||| |||||||||||||||||| ||  | |||||||||||||||| ||||| | |||||||| |||| ||||||||||||| |||| ||||||  |||    
T  5179491 ctactccactaactacaattaatatgaaaactttagtaaatgatactcattttgctattgaaatcaacacaattaatcattttgttaagaatcgtgtaca 5179392  T
Q  110 aatcttaaacaactattttttagagacggatgaagtatcatcta 153  Q
    || ||||||| ||| || |||||||| ||| | ||||| |||||    
T  5179391 aaccttaaacgactgttatttagagatggagggagtattatcta 5179348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 6023749 - 6023627
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| || ||||||||||||||||  ||||||||||||| | |||||| |||||||||||||| |||| |||||| ||||| | |||||||    
T  6023749 caacttaactactccaataactacaattaataaaggtattttagtaaaagctactaaatttaccattgaaatcaacacaattaaacatttccgtaataat 6023650  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    ||  ||||||  |||||| ||||    
T  6023649 cgcgcacaaacattaaacgacta 6023627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 24991753 - 24991631
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| | |||||||||||||||||||  || || ||||||||  || |||||||||| ||||||| |||| |||||||||||| |||||||||    
T  24991753 caacttaactattccactaactacaattaataaaggtgttgtagtaaatactattaattttaccgttgaaatcaacacaattaatcatttccttaataat 24991654  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    |||  ||||| ||||||| ||||    
T  24991653 cgtgtacaaaccttaaacgacta 24991631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 37276483 - 37276581
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    ||||||| | |||||||||||||||||||| || |||||||||| |||||||||||||||||  |||| |||| | |||||||||| ||||||||||||    
T  37276483 ttaactattccactaactacaattaataagggtgttttagtaaacgatactaattttaccatcaaaatcaacacagttaatcatttccttaataatcgt 37276581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 44707860 - 44707758
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||| ||||||||||||||||||||||  || |||||||||||  ||||||||||| ||||||||| || ||||||||||||||   |||||||    
T  44707860 caacttaactgcttcactaactacaattaataaatgtgttttagtaaatactactaattttatcattgaaatcaatataattaatcatttctataataat 44707761  T
Q  102 cgt 104  Q
    |||    
T  44707760 cgt 44707758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 17988654 - 17988530
Alignment:
Q  8 aactacttcactaactacaattaataagagtattttagtaaat--gatactaattttaccattgaaattaacataattaatcattttcttaataatcgta 105  Q
    |||||||||| ||||||||||||||||||||||||||||||||   |||||||||||| ||||||||| |||| |||||||||  ||||||| || ||      
T  17988654 aactacttcattaactacaattaataagagtattttagtaaataatatactaattttaacattgaaatcaacacaattaatcacattcttaaaaaccgcc 17988555  T
Q  106 cacaaatcttaaacaactatttttt 130  Q
     ||||| ||||||  ||||||||||    
T  17988554 aacaaaccttaaatgactatttttt 17988530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 29778481 - 29778423
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaatta 75  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  29778481 actaactacaattaataatgatattttagtaaatgatactaattttaccattgaaatta 29778423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 22181360 - 22181452
Alignment:
Q  8 aactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||| ||| |||||||||| | |||| || ||||||||||||||| |||||||||||||||||| |||  || ||||||||| ||||||||    
T  22181360 aactacctcattaactacaataactaagggtgttttagtaaatgatattaattttaccattgaaatgaactcaactaatcatttccttaataa 22181452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 35538678 - 35538778
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    |||||||||||||||||  ||||||||||||| |||   |||||| ||||||||| |||| ||||||| |||||||||| ||| ||| | ||||||||||    
T  35538678 taactacaattaataaggatattttagtaaataatatccattttatcattgaaatcaacacaattaataattttcttaaaaattgtaaataaatcttaaa 35538777  T
Q  119 c 119  Q
    |    
T  35538778 c 35538778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 49176952 - 49177032
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaata 99  Q
    |||||| ||||||||||||||||||||||||||| ||  |||||||| ||||||| ||||| |||||| |||| |||||||    
T  49176952 taactataattaataagagtattttagtaaatgacacatattttacctttgaaatcaacattattaattatttccttaata 49177032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 32826077 - 32825963
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctt 115  Q
    |||||| ||||||||||||  || ||||||||||||||||||||||||||||  |||| ||||  ||||||||||| |||||||| ||| ||  || |||    
T  32826077 cactaattacaattaataaaggtgttttagtaaatgatactaattttaccatcaaaatcaaca-cattaatcatttccttaataaccgtgcatcaacctt 32825979  T
Q  116 aaacaactatttttta 131  Q
    |||| |||||| ||||    
T  32825978 aaacgactattattta 32825963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 4441699 - 4441581
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgta 105  Q
    |||| |||| |||||||||||||||| ||| || ||||||||||    | ||||||||||||| |||| | || ||||||| |||||||||||||   |     
T  4441699 ttaattactccactaactacaattaacaagggtgttttagtaaagacgattaattttaccattaaaatcaccacaattaattattttcttaataaagatg 4441600  T
Q  106 cacaaatcttaaacaacta 124  Q
    |||||||||||||||||||    
T  4441599 cacaaatcttaaacaacta 4441581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 32219761 - 32219695
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccatt 68  Q
    ||||||||| ||| ||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  32219761 caacttaaccactccacaaactataattaataagagtattttaataaatgatattaattttaccatt 32219695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 3312137 - 3312218
Alignment:
Q  10 ctacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||| ||||||||||||||||||  | |||| ||||||||||||||||||| | |||| |||| |||| ||||||||||||    
T  3312137 ctactccactaactacaattaatatcaatattatagtaaatgatactaatttaatcattaaaatcaacacaattaatcattt 3312218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 146
Target Start/End: Complemental strand, 6267953 - 6267812
Alignment:
Q  5 cttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    |||||||||| || | |||||||  | ||| | |||||||||| ||||||||| ||||| |||| |||| |||| ||||||||||||  |||| ||| ||    
T  6267953 cttaactactccattgactacaaccattaaaaatattttagtacatgatactagttttatcattaaaatcaacacaattaatcatttctttaaaaatagt 6267854  T
Q  105 acacaaatcttaaacaactattttttagagacggatgaagta 146  Q
     |||||| ||||||| |||||| ||| |||||| | ||||||    
T  6267853 gcacaaaccttaaacgactattattttgagacgaaggaagta 6267812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 27687298 - 27687375
Alignment:
Q  41 tttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    |||||||||| ||| |||||||||||||||||| |||| || |||||||||| |||||||| || |||||| ||||||    
T  27687298 tttagtaaataatattaattttaccattgaaatcaacacaactaatcatttttttaataattgtgcacaaaccttaaa 27687375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 6365650 - 6365738
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||||| |||||||||||||||||| ||   ||||||| ||||| |||||||||| |  |||||||| |||| ||||||||||||    
T  6365650 aacttaactaattcactaactacaattaacaatgatattttaataaataatactaatttgattattgaaatcaacacaattaatcattt 6365738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 13579720 - 13579576
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||| |||| |||||||||||||||||| | || |||| |||||||||| |||| ||  |||  |||| |||| ||||||||||||  |||||||||    
T  13579720 aacttaaatactccactaactacaattaatatgggtgtttttgtaaatgatattaatattgtcatcaaaatcaacacaattaatcatttctttaataatc 13579621  T
Q  103 gtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
     | || ||| ||||||  | ||||  ||||||||||||| |||||    
T  13579620 atgcataaaccttaaatgattattacttagagacggatggagtat 13579576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 21910104 - 21909989
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| | | ||||| | |||||||| || |||||| ||| |||||||||||||||||  |||| |||| |||||||||||| |||||||||     
T  21910104 aacttaactactcctcaaactatagttaataag-gtgttttagcaaacgatactaattttaccatcaaaatcaacacaattaatcatttccttaataatt 21910006  T
Q  103 gtacacaaatcttaaac 119  Q
    || || ||| |||||||    
T  21910005 gtgcataaaccttaaac 21909989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 22856334 - 22856267
Alignment:
Q  5 cttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaa 72  Q
    |||||||||| ||||||||||||||||| || ||||||||||||||| || ||||||||  |||||||    
T  22856334 cttaactactccactaactacaattaattagggtattttagtaaatggtattaattttatgattgaaa 22856267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 52837302 - 52837364
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccatt 68  Q
    ||||||||| ||||| ||||||||||||||||||||||||||  ||| | |||||||||||||    
T  52837302 ttaactactccactagctacaattaataagagtattttagtagttgaaattaattttaccatt 52837364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 3260610 - 3260738
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa-t 101  Q
    ||||||||| || ||||||||||||||||||||      ||||||| | |||||| |||||  |||||||| |||| || |||||||||  |||| || |    
T  3260610 aacttaacttctccactaactacaattaataagg-----ttagtaattaatactacttttattattgaaatcaacacaactaatcatttctttaaaaaat 3260704  T
Q  102 cgtacacaaatcttaaacaactattttttagaga 135  Q
    | |||||||||||||||| |||||| ||||||||    
T  3260705 catacacaaatcttaaacgactattatttagaga 3260738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 16783256 - 16783305
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgat 53  Q
    |||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  16783256 acttaactactttaataactacaattaataagagtatattagtaaatgat 16783305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24903988 - 24904061
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaatt 74  Q
    ||||||||||||| | ||||| || ||||||||| | |||||||||||||||||| ||||||  ||||||||||    
T  24903988 tcaacttaactacctaactaattataattaataaaaatattttagtaaatgatacaaattttctcattgaaatt 24904061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 51028576 - 51028471
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    |||||||||||||||| | ||||||| |||||| |||||| ||||  ||| |||| |||| |||||||| ||| ||| | |||||||  |||||||||||    
T  51028576 taactacaattaataaaaatattttaataaatgctactaactttattattaaaatcaacacaattaatcgtttccttgaaaatcgtatgcaaatcttaaa 51028477  T
Q  119 caacta 124  Q
    | ||||    
T  51028476 cgacta 51028471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 146
Target Start/End: Complemental strand, 7439963 - 7439871
Alignment:
Q  54 actaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactattttttagagacggatgaagta 146  Q
    ||||||||||||||||||||| |||   |||||||||||  ||| |||||| || ||| ||||||| |||||| ||| |||||| ||||||||    
T  7439963 actaattttaccattgaaattgacacggttaatcatttttctaaaaatcgtgcaaaaaccttaaacgactattattttgagacgcatgaagta 7439871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 35367821 - 35367869
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatg 51  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||    
T  35367821 aacttaactactccactaactacaattaataagggtgttttagtaaatg 35367869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 43500846 - 43500762
Alignment:
Q  40 ttttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaacta 124  Q
    ||||||||||||| ||||||| ||||||  |||| |||| ||||||| |||| |||||||||||| || ||| ||||||| ||||    
T  43500846 ttttagtaaatgaaactaattataccatcaaaatcaacacaattaataatttccttaataatcgtgcataaaccttaaacgacta 43500762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 43614450 - 43614510
Alignment:
Q  37 gtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||| ||||||||||||||||||||| |||| |||| | |||||||||| |||||    
T  43614450 gtattttagtcaatgatactaattttaccattaaaatcaacacacttaatcatttccttaa 43614510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 35367694 - 35367643
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    |||||||||||||||  |||| |||| |||||||||||||||||||||||||    
T  35367694 tactaattttaccatcaaaatcaacacaattaatcattttcttaataatcgt 35367643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 45615557 - 45615644
Alignment:
Q  10 ctacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||| |||||||||| ||||||||| | |||||||||||||| |||  |||||  ||| ||||||||| |  |||||||||||||||    
T  45615557 ctactccactaactactattaataagggaattttagtaaatgaaactccttttataattaaaattaacacagctaatcattttcttaa 45615644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 978943 - 978849
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaa 110  Q
    |||||||||| |||||||||  ||||| | ||||||| ||  |||||| ||||||||| |||| || ||||||||||||||| ||| ||| ||||    
T  978943 cactaactactattaataaggatatttcattaaatgaaacacattttatcattgaaatcaacacaactaatcattttcttaagaattgtaaacaa 978849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 15904771 - 15904817
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaat 50  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||||    
T  15904771 acttaactacttcactaactacaattaataaggatattttaataaat 15904817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 31154164 - 31154249
Alignment:
Q  20 aactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtac 106  Q
    |||||||||||||||  | | ||||||| || |||||||||||| |||| |||| |||| ||||||||||||| |||| ||||||||    
T  31154164 aactacaattaataaatgcaatttagtagataatactaattttatcattaaaatcaacacaattaatcattttattaa-aatcgtac 31154249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 7351654 - 7351735
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataatt 83  Q
    |||||||| || | ||||||||| ||||||||||  ||||||||||||| ||| |||||||| |||| |||| |||| ||||    
T  7351654 caacttaattattccactaactagaattaataaggttattttagtaaataatattaattttatcattaaaatcaacacaatt 7351735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 9379250 - 9379339
Alignment:
Q  3 aacttaactacttc-actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||||||| | ||||||||||||||||||   ||||||| ||||||||| |||||||| |||| |||| |  | ||||||||||||    
T  9379250 aacttaactactcccactaactacaattaataaatatattttaataaatgatattaattttatcattaaaatcattacaattaatcattt 9379339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 27896973 - 27897082
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||| || |||| ||||||||| ||||||||||| ||||||  ||||| |||||||||||| |||| |||| ||||   ||||| |||| ||||| |||    
T  27896973 caactaaattactccactaactataattaataagaatattttgataaattatactaattttatcattaaaatcaacacgtttaattatttccttaaaaat 27897072  T
Q  102 cgtacacaaa 111  Q
    | | ||||||    
T  27897073 catgcacaaa 27897082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 25089186 - 25089154
Alignment:
Q  2 caacttaactacttcactaactacaattaataa 34  Q
    |||||||||||||||||||||||||||||||||    
T  25089186 caacttaactacttcactaactacaattaataa 25089154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 7460438 - 7460501
Alignment:
Q  29 taataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    |||||| ||| ||||||||||||| ||| || ||| ||||| |||||||| |||||||||||||    
T  7460438 taataaaagtgttttagtaaatgaaactcatattatcattgcaattaacacaattaatcatttt 7460501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 26258025 - 26257930
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaat 112  Q
    |||||| || ||||||||  |||||||||||||||||| | ||||| | |||||||| || | ||||||||||||  |||| | ||| ||||||||    
T  26258025 actaaccacgattaataaaggtattttagtaaatgataatcattttgctattgaaatcaatacaattaatcatttctttaaaagtcgcacacaaat 26257930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 29074902 - 29074997
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||||| | |  |||| |||||||||| |  | ||||| ||||||||| ||||||||||||| |||| |||| || |||||||||| ||||    
T  29074902 caacttaactattacgttaacaacaattaatatggatgttttaataaatgatattaattttaccattaaaatcaacacaactaatcatttttttaa 29074997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 34688945 - 34688858
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||| |  |||||||| ||||||||||  |  ||||||||| ||||||||||||| |||| |||| |||  ||||||||||||    
T  34688945 acttaactattcaactaactaaaattaataagcctggtttagtaaacgatactaattttatcatttaaatcaaccaaattaatcattt 34688858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 34693473 - 34693386
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||| |  |||||||| ||||||||||  |  ||||||||| ||||||||||||| |||| |||| |||  ||||||||||||    
T  34693473 acttaactattcaactaactaaaattaataagcctggtttagtaaacgatactaattttatcatttaaatcaaccaaattaatcattt 34693386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 37177913 - 37178007
Alignment:
Q  52 atactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
    |||||||||||| |||| |||| ||   |||||||  ||||||||| |||||||||| ||||||||| || |||| ||| |||||| |||||||||    
T  37177913 atactaattttatcattaaaatcaatgcaattaattgttttcttaaaaatcgtacac-aatcttaaataattattattttgagacgaatgaagtat 37178007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 13366041 - 13365999
Alignment:
Q  10 ctacttcactaactacaattaataagagtattttagtaaatga 52  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||    
T  13366041 ctactccactaactactattaataagggtattttagtaaatga 13365999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 15057450 - 15057531
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaat 86  Q
    ||||||||||| || |||||| ||||||||| | | ||||| || |||||||||||||||| ||| |||| ||| ||||||||    
T  15057450 acttaactactcca-taactataattaataaaaatgttttaatatatgatactaattttactattaaaatcaacttaattaat 15057531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 35682866 - 35682796
Alignment:
Q  41 tttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaa 111  Q
    |||| |||||||||||||| ||| ||||||||| |||| |||||||| |||  |||| |||||| ||||||    
T  35682866 tttaataaatgatactaatgttatcattgaaatcaacacaattaatcttttcgttaaaaatcgtgcacaaa 35682796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 4659831 - 4659872
Alignment:
Q  58 attttaccattgaaattaacataattaatcattttcttaata 99  Q
    |||||| ||||||||| |||| ||||||||||||||||||||    
T  4659831 attttagcattgaaatcaacacaattaatcattttcttaata 4659872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 9412886 - 9412837
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccatt 68  Q
    |||||||||||||| ||| ||||||| |||||| | ||||||||||||||    
T  9412886 taactacaattaatcagaatattttattaaatgcttctaattttaccatt 9412837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 37539146 - 37539195
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatga 52  Q
    ||||||||||||  ||||||||||||||| |||||| || ||||||||||    
T  37539146 aacttaactactctactaactacaattaacaagagtgttgtagtaaatga 37539195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 41080630 - 41080711
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||| ||||||||||||   ||||| | |||||||||  |||||||| ||| |||| |||| ||||||||||||| ||||    
T  41080630 cactaattacaattaataaagatatttcaataaatgatataaattttactattaaaatcaacacaattaatcatttttttaa 41080711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 15444543 - 15444483
Alignment:
Q  40 ttttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||| ||||  ||||||||||| |||| ||||  ||||||||||| ||||||||    
T  15444543 ttttagtaaataatacatattttaccattaaaatcaacactattaatcatttccttaataa 15444483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 3e-44; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 15058135 - 15058257
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  15058135 caacttaaatacttcactaactacaattaataagggtattttagtaaatgccactaattttaccattgaaattaacttaattaatcattttcttaataat 15058234  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    ||| |||||| ||||||| ||||    
T  15058235 cgtgcacaaaccttaaacgacta 15058257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 31894306 - 31894189
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||||||||||||||||||||||||     |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  31894306 caacttaactacttcactaactacaattaataatgacgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataat 31894207  T
Q  102 cgtacacaaatcttaaac 119  Q
    | ||||||||||||||||    
T  31894206 catacacaaatcttaaac 31894189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 3291864 - 3291720
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||| |||||||| |||||||| ||||  | | |||||||||||| |||||||||    
T  3291864 caacttaactacttcactaactacaattaataaaggtattttagtaaataatactaatattaccattaaaatcgatacaattaatcatttccttaataat 3291765  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagta 146  Q
    ||| || ||| ||||||| |||||| ||||||||| |||| ||||    
T  3291764 cgtgcaaaaaccttaaacgactattatttagagaccgatggagta 3291720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 1956067 - 1955930
Alignment:
Q  10 ctacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacaca 109  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || | |||||||| |||||||||| |  ||  | |    
T  1956067 ctacttcactaactacaattaataagagtatattagtaaatgatactaattttaccattgaaatcaatacaattaatctttttcttaattactgtgtata 1955968  T
Q  110 aatcttaaacaactattttttagagacggatgaagtat 147  Q
    || ||||||| |||||| ||| |||||| |||||||||    
T  1955967 aaccttaaacgactattattttgagacgaatgaagtat 1955930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 6801949 - 6802082
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||| |  ||||||||||||||| ||||||||||||  |||| ||||||||||||||||||||||||||     
T  6801949 caacttaactactccactaactacaattaataagggcgttttagtaaatgatattaattttaccatcaaaatcaacataattaatcattttcttaataac 6802048  T
Q  102 cgtacacaaatcttaaacaactattttttagaga 135  Q
    | | ||  |||||||||| |||||| ||||||||    
T  6802049 catgcatcaatcttaaacgactattatttagaga 6802082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 11656042 - 11655905
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||| |||||| |||||||||||||||||||| || ||||||||||||| ||||||||||||||  |||| |||| |||||||||||||||||||||     
T  11656042 caactttactactccactaactacaattaataagggtgttttagtaaatgacactaattttaccatcaaaatcaacacaattaatcattttcttaataac 11655943  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| || ||| ||||||| ||| || ||||||||||||    
T  11655942 cgtgcataaaccttaaacgactcttatttagagacgga 11655905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 21010212 - 21010340
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    ||||||||||| ||||| || ||||||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||| || || ||| ||||||    
T  21010212 taactacaatttataagggtgttttagtaaatgatactaatttttccatcaaaattaacacaattaatcattttcttaataattgtgcataaaccttaaa 21010311  T
Q  119 caactattttttagagacggatgaagtat 147  Q
    |||||||| |||||| ||||| |||||||    
T  21010312 caactattatttagaaacggaggaagtat 21010340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 1781820 - 1781937
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||| ||| |||||||||||||||||||| || |||||||||||| |||||||||||||||||| || ||||||||||||||||||||||| ||    
T  1781820 tcaacttaac-actccactaactacaattaataagggtgttttagtaaatgctactaattttaccattgagatcaacataattaatcattttcttaacaa 1781918  T
Q  101 tcgtacacaaatcttaaac 119  Q
    |||| || ||| |||||||    
T  1781919 tcgtgcataaaccttaaac 1781937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 13087548 - 13087685
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| |||||||||||||| ||||||||||  | ||||||||||||||| |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  13087548 caacttaattacttcactaactataattaataaggatgttttagtaaatgatattaattttaccattgaaatcaacacaattaatcactttcttaataat 13087647  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    |||  |  || ||||||| ||| || ||||||||||||    
T  13087648 cgtttatgaaccttaaacgacttttatttagagacgga 13087685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 32440741 - 32440604
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||||  ||||| ||||||||||||| || ||||||||||| ||||||||||||||||  |||| |||| |||||||||||| || |||||     
T  32440741 caacttaactactctactaattacaattaataagggtgttttagtaaataatactaattttaccatcaaaatcaacacaattaatcatttcctaaataac 32440642  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| || ||||||||||| |||||| ||||||||||||    
T  32440641 cgtgcataaatcttaaacgactattatttagagacgga 32440604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 13909443 - 13909551
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||| |||| |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||| |||| | |||||||||| ||||||||||    
T  13909443 aacttaattactccactaactacaattaataagggtattttagtaaatgtcactaattttaccattgaaatcaacacatttaatcatttccttaataatc 13909542  T
Q  103 gtacacaaa 111  Q
    || ||||||    
T  13909543 gtgcacaaa 13909551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 1063698 - 1063604
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||||| |||||||||||| ||||||||| |||| ||||||||||||||||||    
T  1063698 aacttaactactccactaactacaattactcagagtattttagtaaataatactaattttatcattgaaatcaacacaattaatcattttcttaa 1063604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 7920256 - 7920373
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||||||| |  |||||||||||||||||| |||| ||||||||||||  |||| ||    
T  7920256 tcaaattaaatacttcactaactacaattaataaga-tattttagtaaatggttttaattttaccattgaaatcaacaaaattaatcatttctttaaaaa 7920354  T
Q  101 tcgtacacaaatcttaaac 119  Q
    |||| ||||||||||||||    
T  7920355 tcgtgcacaaatcttaaac 7920373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 29363324 - 29363461
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| | | ||||||||||||||||||  | |||||||||||||||||| |||||||||  |||| |||| ||||||||||||||||||||||    
T  29363324 caacttaactaatccgctaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaatcaacacaattaatcattttcttaataat 29363423  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
     || || ||| ||||||| |||||| |||| |||||||    
T  29363424 tgtgcataaaccttaaacgactattatttaaagacgga 29363461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 23142688 - 23142787
Alignment:
Q  5 cttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    |||||||||| ||||| |||||||||||||| || ||||||||||||  |||| ||||||||||||||| |||| |||||||||||||||||||||||||    
T  23142688 cttaactactccactacctacaattaataagggtgttttagtaaatgccactatttttaccattgaaatcaacacaattaatcattttcttaataatcgt 23142787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 24983545 - 24983444
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| |||  || ||||||||| ||||| |||    
T  24983545 caacttaactactccactaactacaattaataagggtgttttagtaaatgacactaattttaccattgaaatcaactcaactaatcatttccttaagaat 24983446  T
Q  102 cg 103  Q
    ||    
T  24983445 cg 24983444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 3720338 - 3720215
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||| | ||||||||||||||||||||||| |||| ||||||  ||| |||||||  |||||||| |||| ||||||||||||  |||||||    
T  3720338 tcaacttaactattccactaactacaattaataagagtgtttttgtaaatactacaaattttataattgaaatcaacacaattaatcatttcattaataa 3720239  T
Q  101 tcgtacacaaatcttaaacaacta 124  Q
    |||| |||||| ||||||| ||||    
T  3720238 tcgtgcacaaaccttaaacgacta 3720215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 1225065 - 1225182
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||||||| ||| ||||||||| ||| |||| |||| ||||||||||||  |||| | |    
T  1225065 caacttaacttcttcactaactaaaattaataagaatattttagtaaataatattaattttactatttaaatcaacacaattaatcatttctttaaaact 1225164  T
Q  102 cgtacacaaatcttaaac 119  Q
    ||| ||||| ||||||||    
T  1225165 cgtgcacaactcttaaac 1225182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 30716918 - 30717050
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||| |||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||  || | || | |||||||||||| ||||||||     
T  30716918 caactttactactccactaactacaattaataagggtgtttaagtaaatgatactaattttaccatcaaagtcaataaaattaatcatttccttaataac 30717017  T
Q  102 cgtacacaaatcttaaacaactattttttagag 134  Q
     || ||  |||||||||| |||||| |||||||    
T  30717018 tgtgcatcaatcttaaacgactattatttagag 30717050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 17828958 - 17829094
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| ||||||||||||||||||||||||   ||||||||||||||||| |||||||||  ||||||||||||  |||||| |||| ||||| ||     
T  17828958 caacttaattacttcactaactacaattaataaagatattttagtaaatgatattaattttactgttgaaattaacactattaataatttccttaa-aac 17829056  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
      |||||||| ||||||  |||||| ||| ||||||||    
T  17829057 tatacacaaaccttaaaagactattattttgagacgga 17829094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 21804610 - 21804536
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||| | ||||||||||||    
T  21804610 cactaactacaattaataaga-tatttaagtaaatgatactaattttacaattgaaattaatacaattaatcattt 21804536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 15582302 - 15582446
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||| ||||||||||||||||  | |||  |||||||| ||||||||||| |||||||||||||||| |||| |||||||||||   ||||  ||     
T  15582302 aacttaaccacttcactaactacaacaagtaaatgtattttaataaatgatactgattttaccattgaaatcaacacaattaatcattcatttaaatatt 15582401  T
Q  103 gtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
    ||  ||||||||||||| |||||| |||  ||| ||| |||||||    
T  15582402 gtctacaaatcttaaacgactattattttaagatggaggaagtat 15582446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 34300013 - 34300084
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaat 73  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||||| |||| ||||    
T  34300013 caacttaactacttcactaaccacaattaataaggatattttagtaaataatactaattttatcattcaaat 34300084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 5302369 - 5302467
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||| || |||||||||||||||||  | |||| |||||| ||| ||||||||||||  |||| |||| | |||||||||||||||||||    
T  5302369 caacttaactactccattaactacaattaataaggatgttttggtaaattatattaattttaccatcaaaatcaacacatttaatcattttcttaataa 5302467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 6834450 - 6834328
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctta 116  Q
    |||||||| |||||||||  || ||||||||||||||| |||||| || ||  |||| |||| ||||||| ||||||||||||||||| || |||  |||    
T  6834450 actaactataattaataaaggtgttttagtaaatgatattaatttgactatcaaaatcaacacaattaattattttcttaataatcgtgcataaacttta 6834351  T
Q  117 aacaactattttttagagacgga 139  Q
    || ||||||| |||||| |||||    
T  6834350 aagaactattatttagaaacgga 6834328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 11143683 - 11143597
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacat-aattaatc 87  Q
    ||||||||||||||||||||||| |||||||||| ||  ||||||||||||||||||||||| |||  |||| ||||| ||||||||    
T  11143683 caacttaactacttcactaactataattaataagggtgatttagtaaatgatactaattttatcatcaaaatcaacatcaattaatc 11143597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 8115129 - 8115068
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccatt 68  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  8115129 taactaatccactaactaaaattaataagagtattttagtaaatgatactaattttatcatt 8115068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 27448231 - 27448115
Alignment:
Q  23 tacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaac 122  Q
    ||||||||||||   | |||||||||||||||||||||| | |||  |||| |||| |||||||||||| ||||||||| || || ||| ||||||| |     
T  27448231 tacaattaataatgatgttttagtaaatgatactaatttcatcatcaaaatcaacacaattaatcatttccttaataattgtgcaaaaaccttaaacgat 27448132  T
Q  123 tattttttagagacgga 139  Q
    |||| ||||||||||||    
T  27448131 tattatttagagacgga 27448115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 181574 - 181675
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||| |||||||||   | |||||||||||  |||||||||||| |||||||| || | ||||||| ||||| ||||||||    
T  181574 caacttaactactccactaactataattaataatgatgttttagtaaatactactaattttactattgaaatcaatacaattaat-atttttttaataat 181672  T
Q  102 cgt 104  Q
    |||    
T  181673 cgt 181675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 7072213 - 7072295
Alignment:
Q  37 gtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaac 119  Q
    |||||| ||||||||| ||||||||||||||| |||| |||| ||||||| |||||||||| |||  |||||||| |||||||    
T  7072213 gtatttcagtaaatgacactaattttaccattaaaatcaacacaattaattattttcttaaaaattatacacaaaccttaaac 7072295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 28101448 - 28101375
Alignment:
Q  9 actacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataat 82  Q
    |||||| |||||||||||||||  ||  | ||||||||||||||||||||||||| ||||||||| ||||||||    
T  28101448 actactacactaactacaattatcaaatgaattttagtaaatgatactaattttatcattgaaatcaacataat 28101375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 8115059 - 8114999
Alignment:
Q  51 gatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaa 111  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||| ||| |||||||||    
T  8115059 gataccaattttacaattgaaattgacataattaatcattttcttaaaaattgtacacaaa 8114999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 4582053 - 4581970
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacaca 109  Q
    |||||||| || ||||||||||||||||| ||||||||||||| |||| |||| |  |||| |||||| ||| |||||||||||    
T  4582053 aattaatatgaatattttagtaaatgatattaattttaccattaaaatcaacacagctaattattttcataagaatcgtacaca 4581970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 16431038 - 16431101
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttacc 65  Q
    |||||||| |||||||  |||||||| |||||||||||||||||||||||| || |||||||||    
T  16431038 caacttaattacttcataaactacaagtaataagagtattttagtaaatgacacaaattttacc 16431101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 26592352 - 26592439
Alignment:
Q  14 ttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| ||| || ||| |||| ||||||||||||||  ||||||||||| |||| || || ||||||||||| |||||||||    
T  26592352 ttcactaactataataaacaagggtatattagtaaatgatacacattttaccattaaaatcaatattattaatcatttccttaataat 26592439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 2423662 - 2423736
Alignment:
Q  28 ttaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||||||| ||||| ||||||||||  ||||||||||| |||| ||||  |||||||||||||| |||||||    
T  2423662 ttaataagagtgttttaataaatgatacatattttaccattaaaatcaacaatattaatcattttctgaataatc 2423736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 4367349 - 4367295
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatact 56  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||||||||    
T  4367349 caacttaactacttcactaactacagttaataaggatattttagaaaatgatact 4367295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 8695067 - 8695124
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaatttta 63  Q
    ||||| ||||||||||||||||||||||||| | |||||||||||| || ||||||||    
T  8695067 ttaaccacttcactaactacaattaataagaatgttttagtaaatgctattaatttta 8695124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 25418057 - 25417966
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||| |||| || |||||||| | ||||||| ||||| ||| |||||||| ||||||||| ||  ||  |||||||||||||||    
T  25418057 ttaactacttcattaacaacgattaataaaaatattttactaaataatattaattttaacattgaaatcaatctacctaatcattttcttaa 25417966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 17835402 - 17835492
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    |||||||||||||  || |||||||||||||||  |||||||||||||||| | ||||||||  ||| |||| || | ||||||| |||||    
T  17835402 caacttaactactaaacaaactacaattaataaatgtattttagtaaatgagattaattttattattaaaatcaatacaattaattatttt 17835492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 32251887 - 32251984
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    |||||| ||| ||||||| ||| |||||  || |||||||| ||||  |  ||||| |||||||||| ||||| |||||||||||| |||||||||||    
T  32251887 taactatttcgctaactaaaatgaataatggtgttttagtacatgaaccatatttttccattgaaatcaacattattaatcatttttttaataatcgt 32251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 4590670 - 4590610
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaat 86  Q
    |||||||| || |||||||||||| |||| ||||||||| |||||||| |||| |||||||    
T  4590670 aattaatatgaatattttagtaaacgatattaattttactattgaaatcaacacaattaat 4590610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 34657658 - 34657610
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaat 50  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||| |||||    
T  34657658 caacttaactactccactaactacaattaataaaagtgttttaataaat 34657610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 15046165 - 15046232
Alignment:
Q  80 aattaatcattttcttaataatcgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
    ||||||| | |||| ||| |||||||||||||||||| || |||||| ||| ||||||||| ||||||    
T  15046165 aattaattactttcgtaaaaatcgtacacaaatcttagacgactattatttggagacggataaagtat 15046232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 22398432 - 22398467
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagt 38  Q
    ||||||||||||||| ||||||||||||||||||||    
T  22398432 aacttaactacttcaataactacaattaataagagt 22398467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 34639497 - 34639446
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    ||||||||| |||||||||||||||| ||||||| |||| |||| |||||||    
T  34639497 tactaatttcaccattgaaattaacacaattaattatttccttattaatcgt 34639446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 7764335 - 7764246
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||| ||| | ||| |||||| ||||||||   |||||||| ||||| ||| ||||||||||||| |||| |||||||||||| ||||    
T  7764335 tcaacttgactgcctcaataactataattaatagaggtattttaataaat-atattaattttaccattaaaatcaacataattaataattt 7764246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 105
Target Start/End: Complemental strand, 12605554 - 12605456
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgta 105  Q
    ||||||||  |||||||| |||||||||  || ||||| |||||||||  |||||| ||||| |||| ||  | |||||||||||| ||||||| ||||    
T  12605554 taactactctactaactaaaattaataaaggtgttttaataaatgatataaattttgccattaaaatcaatcttattaatcattttgttaataaccgta 12605456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 27823338 - 27823416
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||||| ||| ||||| ||||||| ||| ||||||  ||||| ||||||  || |||| ||||||||||    
T  27823338 taactacaattaataaaagtgttttaataaatgaaactcattttattattgagattaactcaactaattattttcttaa 27823416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13206929 - 13206884
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagt 46  Q
    |||| ||||| ||| ||||||||||||||||||| |||||||||||    
T  13206929 tcaatttaacaactccactaactacaattaataaaagtattttagt 13206884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 23397713 - 23397616
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcg 103  Q
    |||| |||| ||||||||||| ||||||   || ||||||||||| | ||||||||||||||| |||| |||  || |||| |||||| ||| |||||    
T  23397713 ttaattactccactaactacacttaatagatgtgttttagtaaattacactaattttaccatttaaatcaactcaagtaataattttcataagaatcg 23397616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 33510158 - 33510218
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaatttta 63  Q
    |||||||||||||  | ||| |||||||||||| | ||||||||||||| ||||||||||||    
T  33510158 caacttaactactcaattaattacaattaataaaaatattttagtaaat-atactaatttta 33510218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 34436304 - 34436271
Alignment:
Q  19 taactacaattaataagagtattttagtaaatga 52  Q
    |||||| |||||||||||||||||||||||||||    
T  34436304 taactataattaataagagtattttagtaaatga 34436271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 26974050 - 26974191
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgat---actaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||   | |||||||||||||||||| |||| |||||||||||| |||||    
T  26974050 tcaacttaactactccactaactacaattaataagagtattttagtaaatgatgatattaattttaccattgaaatcaacacaattaatcatttccttaa 26974149  T
Q  98 taatcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||||||| |||||| ||||||| |||||  ||||||||||||    
T  26974150 taatcgtgcacaaaccttaaacgactataatttagagacgga 26974191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 9786013 - 9786158
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||| | ||||||||||||  |||| |||| |||||||||||| |||||||||    
T  9786013 caacttaactacttcactaactacaattaataagcgtgttttagtaaatgaaattaattttaccatcaaaatcaacacaattaatcatttccttaataat 9786112  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
    ||| |||| | ||||||| |||||| |||||||||||||| |||||    
T  9786113 cgtgcacagaccttaaacgactattatttagagacggatggagtat 9786158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 34100651 - 34100507
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||||||| ||||||||||||||||   |||||||||||||| |||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  34100651 caacttaactacttcagtaactacaattaataaagatattttagtaaatgctactaattttactattgaaatcaacacaattaatcattttcttaataat 34100552  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagta 146  Q
    |||  |||||||||||||||||| | ||  |||||||||| ||||    
T  34100551 cgttgacaaatcttaaacaactaatattgtgagacggatggagta 34100507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 27921013 - 27921146
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||     
T  27921013 caacttaactaatgcactaactacaattaataagagtgttttaataaatgatactaattttaccattaaaatcaacataattaatcattttcttaataac 27921112  T
Q  102 cgtacacaaatcttaaacaactattttttagaga 135  Q
     || ||  || |||||||||||||| ||||||||    
T  27921113 tgtgcatcaaccttaaacaactattatttagaga 27921146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 34947525 - 34947662
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||| ||||||||||||  |||||||     
T  34947525 caacttaactactccactaactacaattaataagggtgttttagtaaatgataataattttaccattgaaatcaacacaattaatcatttctttaataaa 34947624  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    | | |||||| ||||||| |||||| ||||||||||||    
T  34947625 catgcacaaaccttaaacgactattatttagagacgga 34947662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 41506169 - 41506054
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  41506169 caacttaactactccactaactacaattaataagagtgttttagtaaatgctactaattttaccattaaaattaacacaattaatcatttccttaataat 41506070  T
Q  102 cgtacacaaatcttaa 117  Q
    ||| || ||| |||||    
T  41506069 cgtgcataaaccttaa 41506054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 28103758 - 28103875
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||| |||||||||||||||||||||||| || |||| ||||||| | ||||||||||||||||||| |||| ||||||||||||||||||||||    
T  28103758 caacttaaccacttcactaactacaattaataagggtgttttggtaaatgctgctaattttaccattgaaatcaacacaattaatcattttcttaataat 28103857  T
Q  102 cgtacacaaatcttaaac 119  Q
    ||| |||||| |||||||    
T  28103858 cgtgcacaaaccttaaac 28103875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 83411 - 83547
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| | ||||||||||||||||||| | ||||||||||||||||||||||||||||  |||| |||| |||||||||||| |||||||||     
T  83411 aacttaactactccgctaactacaattaataagaatgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataatt 83510  T
Q  103 gtacacaaatcttaaacaactattttttagagacgga 139  Q
    || || ||| ||||||| |||||| ||||||||||||    
T  83511 gtgcataaaccttaaacgactattatttagagacgga 83547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 30865993 - 30866109
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||  |||||||||    
T  30865993 aacttaactactccactaattataattaataagagtattttagtaaatgatattaattataccattgaaattaacacaattaatcatttctttaataatc 30866092  T
Q  103 gtacacaaatcttaaac 119  Q
    || |||||| |||||||    
T  30866093 gtgcacaaaccttaaac 30866109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 32346157 - 32346034
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| |||||| || |||||||||||||||||||||| |||||| |||||||||||||||||| |||| ||| ||| |||| ||||||||    
T  32346157 tcaacttaactactccactaattataattaataagagtattttagtagatgatattaattttaccattgaaatcaacacaatcaattatttccttaataa 32346058  T
Q  101 tcgtacacaaatcttaaacaacta 124  Q
     |||||||||| ||||||||||||    
T  32346057 ccgtacacaaaccttaaacaacta 32346034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 16560674 - 16560537
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||  ||||||||||||||||||||  | |||||||||||||||||| |||||||||  |||| |||| |||||||||||| |||||||||    
T  16560674 caacttaactaccccactaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttccttaataat 16560575  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| || ||||||||||  |||||| ||||||||||||    
T  16560574 cgtgcataaatcttaaatgactattatttagagacgga 16560537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 16604988 - 16605125
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||  ||||||||||||||||||||  | |||||||||||||||||| |||||||||  |||| |||| |||||||||||| |||||||||    
T  16604988 caacttaactaccccactaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttccttaataat 16605087  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| || ||||||||||  |||||| ||||||||||||    
T  16605088 cgtgcataaatcttaaatgactattatttagagacgga 16605125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 28202413 - 28202268
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||| |||||| ||||||||||||||||||||  | ||||||||||||| | ||||||||||||  |||| |||| ||||||| |||||||||||||     
T  28202413 caactttactactccactaactacaattaataaggatgttttagtaaatgacattaattttaccatcaaaatcaacacaattaattattttcttaataac 28202314  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
    ||| || ||| |||||||||||||| |||||||||||||| |||||    
T  28202313 cgtgcataaaccttaaacaactattatttagagacggatggagtat 28202268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 11373532 - 11373410
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||||| ||||||||||||||| ||||| |||| |||||| ||||| |||||||||    
T  11373532 caacttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttaccatcgaaatcaacacaattaaacatttccttaataat 11373433  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    ||| |||||  ||||||| ||||    
T  11373432 cgtgcacaatccttaaacgacta 11373410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 24516393 - 24516291
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||||||||||||  | |||||||||||| ||||||||||||||||||||| |||| ||||||||||||| ||||||||    
T  24516393 caacttaactactccactaactacaattaataaggtttttttagtaaatgttactaattttaccattgaaatcaacacaattaatcattttattaataat 24516294  T
Q  102 cgt 104  Q
    |||    
T  24516293 cgt 24516291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 5524405 - 5524514
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||||  |||||||| ||||||||| ||| ||||| |||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  5524405 caacttaactactcaactaactataattaataaaagtgttttattaaatgttactaattttaccattgaaatcaacacaattaatcattttcttaataat 5524504  T
Q  102 cgtacacaaa 111  Q
    ||| ||||||    
T  5524505 cgtgcacaaa 5524514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 42935700 - 42935824
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctt 115  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||  |||| |||| ||||||||||||||||||||| ||| ||  || |||    
T  42935700 cactaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcattttcttaataaccgtgcatcaacctt 42935799  T
Q  116 aaacaactattttttagagacggat 140  Q
    |||| |||||| |||||||||||||    
T  42935800 aaacgactattatttagagacggat 42935824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 2850971 - 2850840
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctt 115  Q
    ||||||||| ||||||| || |||||||||||||| ||| |||||||| ||||||||| ||||||||||||||||| |||||||||| | |||||| | |    
T  2850971 cactaactataattaatgagggtattttagtaaataatattaattttatcattgaaatcaacataattaatcatttccttaataatcatgcacaaaccat 2850872  T
Q  116 aaacaactattttttagagacggatgaagtat 147  Q
    |||| |||||  |||||||||||||| |||||    
T  2850871 aaacgactataatttagagacggatggagtat 2850840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 3178308 - 3178186
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||  || ||||||||||||||| ||||||||||||  |||| |||| ||| |||||||| |||||||||    
T  3178308 caacttaactactccactaactacaattaataaaggtgttttagtaaatgatattaattttaccatcaaaatcaacacaatcaatcatttacttaataat 3178209  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    | | |||||| ||||||||||||    
T  3178208 catgcacaaaccttaaacaacta 3178186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 7463238 - 7463360
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||||||||| || |||||| |||||||| ||||||||||| ||||||||| |||| |||||||||||| ||||||||     
T  7463238 caacttaactactccactaactacaattaatgagggtatttaagtaaatgctactaattttatcattgaaatcaacacaattaatcatttccttaataac 7463337  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    ||| |||||  ||||||| ||||    
T  7463338 cgtgcacaatccttaaacgacta 7463360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 21390321 - 21390466
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| ||||||||||||| ||||||  | ||||||||||||||| || |||||||||  ||||||||| |||||||||||| ||||||||||    
T  21390321 aacttaactactccactaactacaatcaataaggatgttttagtaaatgatattagttttaccatcaaaattaacacaattaatcatttccttaataatc 21390420  T
Q  103 gtacacaaatcttaaacaac--tattttttagagacggatgaagta 146  Q
    || || ||| ||||||| ||  |||| |||||||||||||| ||||    
T  21390421 gtgcataaaccttaaacgactgtattatttagagacggatggagta 21390466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 21760088 - 21759966
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| || |||||||||||| |||| || ||||| ||||||||||||||||||||||  |||| |||| ||||||||||||||||||||||    
T  21760088 caacttaactactccattaactacaattagtaagggtgttttattaaatgatactaattttaccatcaaaatcaacacaattaatcattttcttaataat 21759989  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    | | |||||| ||||||| ||||    
T  21759988 catgcacaaaccttaaacgacta 21759966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 38391773 - 38391890
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| || | |||||||||||||||| |||||| ||||||||||||||||||||||||||||  |||| |||| ||||||||||||||||||||||    
T  38391773 caacttaattattccactaactacaattaacaagagtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcattttcttaataat 38391872  T
Q  102 cgtacacaaatcttaaac 119  Q
     || || ||| |||||||    
T  38391873 tgtgcataaaccttaaac 38391890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 40076356 - 40076473
Alignment:
Q  18 ctaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaa 117  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||  ||||||||||| || ||| |||||    
T  40076356 ctaagtacaattaataatagtgttttagtaaatgatactaattttaccatcaaaattaacacaattaatcatttctttaataatcgtgcataaaccttaa 40076455  T
Q  118 acaactattttttagaga 135  Q
    || |||||| ||||||||    
T  40076456 acgactattatttagaga 40076473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 19271837 - 19271729
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| ||||  |||||||| | ||||||||| |||| ||||||||||||| ||||||||    
T  19271837 caacttaactactccactaactacaattaataaaagtattttagtcaatgccactaatttgatcattgaaatcaacacaattaatcatttttttaataat 19271738  T
Q  102 cgtacacaa 110  Q
    ||| |||||    
T  19271737 cgtgcacaa 19271729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 22738726 - 22738866
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| |  |||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||  ||| ||||||||||||  ||||||||    
T  22738726 caacttaactaatctactaactacaattaatgaggatattttagtaaatgatactaattttaccattgaaatctacacaattaatcatttctttaataat 22738825  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatga 142  Q
    ||| || ||| ||||||| |||| | ||  |||||||||||    
T  22738826 cgtgcataaaccttaaacgactaatattgtgagacggatga 22738866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 33819238 - 33819358
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||| |||||| ||| ||| |||||||||||||||  ||| ||||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  33819238 tcaacttcactactccacaaacaacaattaataagagtgattttgtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataa 33819337  T
Q  101 tcgtacacaaatcttaaacaa 121  Q
    |||||||  || |||||||||    
T  33819338 tcgtacattaaccttaaacaa 33819358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 44180268 - 44180367
Alignment:
Q  40 ttttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||  | ||| ||||||| |||||| ||||||||||||    
T  44180268 ttttagtaaattatactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgtataaaccttaaacgactattatttagagacgga 44180367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 759195 - 759061
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| | ||||||||||||||||||  | |||||||||||||||||| |||||||||  |||| |||| |||||||||||| |||||||||    
T  759195 caacttaactactccgctaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaatcaacacaattaatcatttccttaataat 759096  T
Q  102 cgtacacaaatcttaaacaactattttttagagac 136  Q
     || || ||| ||||||  |||||| |||||||||    
T  759095 tgtgcataaaccttaaatgactattatttagagac 759061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 7457509 - 7457403
Alignment:
Q  18 ctaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaa 117  Q
    ||||||||| |||||||| || ||||||||||||  |||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||  ||||    
T  7457509 ctaactacatttaataagggtcttttagtaaatgtaactaattttaccattgaaatcaacataattaatcatttttttaataatcgtgcacaaacattaa 7457410  T
Q  118 acaacta 124  Q
    | |||||    
T  7457409 ataacta 7457403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 16904404 - 16904538
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| || ||||||||||| |||||||| ||||||||||| || ||||| ||||||||| |||||||| |||| |||||||||||||||||| |||    
T  16904404 caacttaattatttcactaactataattaatacgagtattttagaaagtgataataattttactattgaaatcaacacaattaatcattttcttaaaaat 16904503  T
Q  102 cgtacacaaatcttaaacaactattttttagagac 136  Q
      | |||||| ||||||| |||||| ||| |||||    
T  16904504 tttgcacaaaccttaaacgactattattttgagac 16904538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 49101687 - 49101807
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtatttta---gtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    |||||||||||||| |||||||||||||||||| ||||||||||   |||||||||| |||||||| | || |||| |||| ||||||||||||||||||    
T  49101687 tcaacttaactactccactaactacaattaatatgagtattttaatagtaaatgatattaattttatccttaaaataaacacaattaatcattttcttaa 49101786  T
Q  98 taatcgtacacaaatcttaaa 118  Q
     ||||||| ||||| ||||||    
T  49101787 aaatcgtaaacaaaccttaaa 49101807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 2459498 - 2459616
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcg 103  Q
    ||||||||||| |||||||||||||||||||| || || ||||||||||  ||||||||||| ||||||| |||| |||||||||||| |||||||||||    
T  2459498 acttaactactccactaactacaattaataagggtgttgtagtaaatga--ctaattttaccgttgaaatcaacacaattaatcatttccttaataatcg 2459595  T
Q  104 tacacaaatcttaaacaacta 124  Q
    | ||||||  |||||| ||||    
T  2459596 tgcacaaacattaaacgacta 2459616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 8592543 - 8592399
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||| |||||| |||||||||||||||||||| || ||||| |||||  ||||||||| ||||||||||| |||| ||||||||||||  |||||||||    
T  8592543 aactttactactccactaactacaattaataagggtgttttattaaatactactaatttaaccattgaaatcaacacaattaatcatttctttaataatc 8592444  T
Q  103 gtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
     | |||||| |||||||  ||| | ||  ||||||||||||||||    
T  8592443 atgcacaaaccttaaacggctaatattgtgagacggatgaagtat 8592399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 29835501 - 29835401
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    ||||| |||||||||||||| |||||||||||| |||||||||||||||| |||| ||||||||||||||||| |||||||| ||  |||||| ||||||    
T  29835501 taactgcaattaataagagtgttttagtaaatgctactaattttaccatttaaatcaacataattaatcatttccttaataagcgcgcacaaaccttaaa 29835402  T
Q  119 c 119  Q
    |    
T  29835401 c 29835401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 46478397 - 46478295
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||||  | ||||||||||||||||| ||||||||||||||| |||||| ||||| ||| ||||||||| ||||||||||||  ||||||||    
T  46478397 caacttaactactcaattaactacaattaataagggtattttagtaaatgctactaactttactattaaaattaacacaattaatcatttaattaataat 46478298  T
Q  102 cgt 104  Q
    |||    
T  46478297 cgt 46478295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 13961984 - 13962121
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||| ||||||||  ||||||| ||| ||||| |||||||| |||| |||| |||| |||||||||||| ||||||||     
T  13961984 caacttaactactccactaactacacttaataaggatattttattaagtgatattaattttatcattaaaatcaacacaattaatcatttccttaataaa 13962083  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| || ||| ||||||  |||||| ||||||| ||||    
T  13962084 cgtgcataaaccttaaatgactattatttagaggcgga 13962121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 21350729 - 21350610
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||||   |||| ||||||||||||||| |||| |||||   |||| |||||||||    
T  21350729 caacttaactactccactaactacaattaataagggtgttttagtaaatacaactatttttaccattgaaatcaacacaatta---atttccttaataat 21350633  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    ||| |||||| ||||||| ||||    
T  21350632 cgtgcacaaaccttaaacgacta 21350610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 23670512 - 23670627
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| |||||||||| |||||||||||| |||||||||||| || |||||||||||| ||||| |||| ||||||| |||  |||||||||     
T  23670512 aacttaactactccactaactaccattaataagagtgttttagtaaatgctattaattttaccatggaaatcaacacaattaat-attcccttaataatt 23670610  T
Q  103 gtacacaaatcttaaac 119  Q
    || |||||| |||||||    
T  23670611 gtgcacaaaccttaaac 23670627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 32018816 - 32018700
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| ||||  |||||| |||||||||||||||||||||||||||||||  |||||||| |||||||| |||| ||||| ||||||  |||| |||    
T  32018816 caacttaattactctactaacgacaattaataagagtattttagtaaatgatagaaattttactattgaaatcaacacaattattcatttcattaaaaat 32018717  T
Q  102 cgtacacaaatcttaaa 118  Q
    |||||| |||| |||||    
T  32018716 cgtacaaaaattttaaa 32018700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 17828455 - 17828334
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| |||| |||||||||||||| ||||||||| ||| |||||||||| |||||||||||||||||| |||| || ||||| ||| |||||| ||    
T  17828455 caacttaattactccactaactacaattgataagagtaattttgtaaatgatattaattttaccattgaaatcaacaaaaataatcgtttccttaat-at 17828357  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    ||| ||||||  |||||| ||||    
T  17828356 cgtgcacaaactttaaacgacta 17828334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 37245715 - 37245834
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctt---aat 98  Q
    ||||||||| ||| |||| | |||||||||||||||| |||||||||||| |||||| |||||||||||||| |||| |||||||| |||||||   |||    
T  37245715 caacttaaccactccacttattacaattaataagagtgttttagtaaatgctactaa-tttaccattgaaatcaacagaattaatctttttcttataaat 37245813  T
Q  99 aatcgtacacaaatcttaaac 119  Q
    |||||| |||||| |||||||    
T  37245814 aatcgtgcacaaaccttaaac 37245834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 43873948 - 43874046
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||| ||||||||||| |||||||| || ||||||||||||||| ||||||||||||  |||| |||| ||||||||||||  |||||||    
T  43873948 caacttaactactccactaactacatttaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttctttaataa 43874046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 32019020 - 32018909
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccatt-gaaattaacataattaatcattttcttaataa 100  Q
    |||||||| |||| ||||||| |||||||||||||||||||||||||||||||  |||||||| |||  |||| |||| ||||||||||||  |||| ||    
T  32019020 caacttaattactccactaacaacaattaataagagtattttagtaaatgatagaaattttactattcaaaatcaacacaattaatcatttcattaaaaa 32018921  T
Q  101 tcgtacacaaat 112  Q
    ||||||| ||||    
T  32018920 tcgtacagaaat 32018909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 21937887 - 21937796
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||| |||||||||||||||||||||||  |||||||||||| |||||||||| |||| |||| ||  ||| ||||||||| |||||    
T  21937887 ttaactactccactaactacaattaataagagtgctttagtaaatgacactaattttatcattaaaataaagttaactaatcatttccttaa 21937796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 146
Target Start/End: Original strand, 39452390 - 39452512
Alignment:
Q  23 tacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaac 122  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||| |||| ||||| |||||| ||||| ||||  || ||   |||| ||||||| ||    
T  39452390 tacaattaataagggtattttagtaaatgatattaattttaccattaaaatcaacat-attaattatttttttaaagattgtgtccaaaccttaaacgac 39452488  T
Q  123 tattttttagagacggatgaagta 146  Q
    |||| |||||||| ||| ||||||    
T  39452489 tattatttagagatggaggaagta 39452512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 46211472 - 46211593
Alignment:
Q  21 actacaattaataagagtattttagtaaatgata---ctaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaa 117  Q
    |||||||||||||||  | |||||||||||||||   ||| |||||||||  |||| |||| |||||||||||| ||||||||| || || ||| |||||    
T  46211472 actacaattaataaggatgttttagtaaatgatagtactagttttaccatcaaaatcaacacaattaatcatttccttaataattgtgcataaaccttaa 46211571  T
Q  118 acaactattttttagagacgga 139  Q
    || |||||| |||| |||||||    
T  46211572 acgactattatttaaagacgga 46211593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 47045538 - 47045469
Alignment:
Q  21 actacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| |||  ||||||||||||    
T  47045538 actacaattaataagggtattttaggaaatgatactaatttta-cattgaaatcaactcaattaatcattt 47045469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 6495038 - 6494973
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccat 67  Q
    |||||| |||||| ||||||||||||||||||| ||| ||||||||||| | ||||||||||||||    
T  6495038 caactttactactccactaactacaattaataaaagtgttttagtaaataacactaattttaccat 6494973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 7930083 - 7930176
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||| ||||||||||| |||||||||| || |||||||||||||  |  ||||| |||||||||| ||||  | ||||||||||||||||||    
T  7930083 taactatttcactaactataattaataagggtgttttagtaaatgaaccatatttttccattgaaatcaacactactaatcattttcttaataa 7930176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 12631345 - 12631446
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctta 116  Q
    |||||||||||||||||||  | ||||  |||||  |||||||||||| |||||||| || | ||||||| |||| |||||||||||| |||||| ||||    
T  12631345 actaactacaattaataaggatgttttgataaatactactaattttactattgaaatcaatacaattaattatttccttaataatcgtgcacaaacctta 12631444  T
Q  117 aa 118  Q
    ||    
T  12631445 aa 12631446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 48608891 - 48609012
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||| ||||||||||| |||||||||  | |||||||||    ||||| |||||||||  |||| |||| |||||||||||| |||||||||    
T  48608891 caacttaactacatcactaactacgattaataaggatgttttagtaa----tactagttttaccatcaaaatcaacacaattaatcatttccttaataat 48608986  T
Q  102 cgtacacaaatcttaaacaactattt 127  Q
    | | || ||| || |||| |||||||    
T  48608987 catgcataaacctcaaacgactattt 48609012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 17610638 - 17610571
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaat 73  Q
    ||||||| |||||||| || ||||||||||| ||||||| ||||| ||||||||||||||||| ||||    
T  17610638 ttaactatttcactaattaaaattaataagaatattttaataaattatactaattttaccattaaaat 17610571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 31930592 - 31930457
Alignment:
Q  11 tacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaa 110  Q
    |||| |||||||||||||||||||| ||||||||  |||| | | || |||||||||| |||| |||| | | ||||||||  ||||||||||| || ||    
T  31930592 tactccactaactacaattaataagggtattttaaaaaattagattagttttaccattaaaatcaacacagtcaatcatttctttaataatcgtgcataa 31930493  T
Q  111 atcttaaacaactattttttagagacggatgaagta 146  Q
    |  |||||| |||||  |||||||| ||| ||||||    
T  31930492 actttaaacgactataatttagagaaggaggaagta 31930457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 39005461 - 39005512
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccatt 68  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  39005461 actaactacaattattaaaggtattttagtaaatgatactaattttaccatt 39005512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 25571444 - 25571498
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatact 56  Q
    ||||||||||| | |||||||||||| ||||||| ||||||||||||||||||||    
T  25571444 caacttaactattccactaactacaactaataagggtattttagtaaatgatact 25571498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 35333069 - 35333151
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaa 85  Q
    |||||||||||| ||||||||||||||||||| | ||||||| ||||| ||| ||||| ||  |||||||| |||| ||||||    
T  35333069 aacttaactactccactaactacaattaataataatattttaataaataatattaattatataattgaaatcaacacaattaa 35333151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 44424169 - 44424299
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| |||| ||||||||||| |||||||| ||      ||||||||||   ||||||||||  |||| |||| |||||||||||| ||||||||     
T  44424169 caacttaattactccactaactacatttaataagggt------gtaaatgata---attttaccatcaaaatcaacacaattaatcatttccttaataac 44424259  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatg 141  Q
    ||| ||  || ||||||| |||||| ||||||||||||||    
T  44424260 cgtgcatcaaccttaaacgactattatttagagacggatg 44424299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 27557048 - 27556975
Alignment:
Q  27 attaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||| ||||||||||||||||  ||||| ||||| |||| ||||| | ||||||||| ||||||||    
T  27557048 attaataagagtgttttagtaaatgatacacattttgccattaaaatcaacatcagtaatcatttccttaataa 27556975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 7004441 - 7004504
Alignment:
Q  59 ttttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaac 122  Q
    |||||||||||||||| |||||||||||||||||  ||| ||| ||||||||| || |||||||    
T  7004441 ttttaccattgaaattgacataattaatcatttttgtaaaaattgtacacaaacctaaaacaac 7004504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 7019799 - 7019862
Alignment:
Q  59 ttttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaac 122  Q
    |||||||||||||||| |||||||||||||||||  ||| ||| ||||||||| || |||||||    
T  7019799 ttttaccattgaaattgacataattaatcatttttgtaaaaattgtacacaaacctaaaacaac 7019862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 7050312 - 7050375
Alignment:
Q  59 ttttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaac 122  Q
    |||||||||||||||| |||||||||||||||||  ||| ||| ||||||||| || |||||||    
T  7050312 ttttaccattgaaattgacataattaatcatttttgtaaaaattgtacacaaacctaaaacaac 7050375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 24167021 - 24167080
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttacca 66  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| | | |||||||||||    
T  24167021 taactactgcactaactactattaataagggtattttagtaaataacattaattttacca 24167080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 42796039 - 42796094
Alignment:
Q  8 aactacttcactaactacaattaataagagtattttagtaaatgatactaatttta 63  Q
    ||||||| |||||||||||||||||||| || ||||| |||||| |||||||||||    
T  42796039 aactactccactaactacaattaataagggtgttttaataaatgttactaatttta 42796094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 15464720 - 15464790
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcat 89  Q
    |||||| |||||| ||||||| |||||||||||||||  ||||||||||| |||| ||||  |||||||||    
T  15464720 taactataattaacaagagtactttagtaaatgatacacattttaccattaaaatcaacactattaatcat 15464790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 19060488 - 19060367
Alignment:
Q  14 ttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatc 113  Q
    ||||||||||||||||||||||     | || ||||| ||| ||||||||| ||| |||| |||| ||||||||||||  || | |||  ||||||||      
T  19060488 ttcactaactacaattaataag-----tataataaataatattaattttacaatttaaatcaacacaattaatcatttctttcaaaattatacacaaact 19060394  T
Q  114 ttaaacaactattttttagagacggat 140  Q
    |||||| |||||| |||||||||||||    
T  19060393 ttaaacgactattatttagagacggat 19060367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 25531070 - 25530992
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    ||||||||||||| |||||||||||||| |  ||||| ||||| |||| ||||  |||||||||||| ||| |||||||    
T  25531070 aattaataagagtgttttagtaaatgatgcacattttgccattaaaatcaacactattaatcatttttttagtaatcgt 25530992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 27903314 - 27903356
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaa 58  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  27903314 cactaactacaattaatacgagtattttggtaaatgatactaa 27903356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 31327482 - 31327550
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttct 94  Q
    ||||||||||||| ||| ||||||||||||  |||||| |||| |||| ||||| ||| ||||||||||    
T  31327482 aattaataagagtgtttcagtaaatgatacatattttatcattaaaatcaacattattcatcattttct 31327550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 10042308 - 10042371
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccat 67  Q
    ||||||||||| || ||| || ||||||||||| ||||||| ||||||||| ||| ||||||||    
T  10042308 acttaactactccaataattataattaataagaatattttaataaatgatattaagtttaccat 10042371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 30107160 - 30107241
Alignment:
Q  21 actacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||| |||| ||||| |||||| ||||||| ||| ||||||||||||| |||| |||  || |||| |||||||||| ||||    
T  30107160 actataattcataagggtatttaagtaaataatattaattttaccattaaaatcaactaaactaattattttcttaagaatc 30107241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 47254958 - 47255031
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    |||||| ||||||||||||| ||||||||||||| |   ||||||||| |||| | || || ||||||||||||    
T  47254958 taactataattaataagagtgttttagtaaatgaaatatattttaccaatgaagtcaatattattaatcatttt 47255031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 7348251 - 7348203
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatac 55  Q
    ||||||||||| |||||| ||||||||||||| ||||| | ||||||||    
T  7348251 taactacttcagtaactataattaataagagtgttttaattaatgatac 7348203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 17610927 - 17610975
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaat 50  Q
    ||||||||||| |||| |||||||||||||||  | |||||||||||||    
T  17610927 caacttaactatttcaataactacaattaatacaaatattttagtaaat 17610975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 27167957 - 27167905
Alignment:
Q  40 ttttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    ||||||||| ||||||  ||||||||||| |||| ||||| ||||||||||||    
T  27167957 ttttagtaattgatacacattttaccattaaaataaacattattaatcatttt 27167905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 30546457 - 30546365
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctta 96  Q
    ||||||||||| || ||||||||||||||||  || ||||||||| ||| |  |||||| |||||||| | |||  |  ||||||||||||||    
T  30546457 acttaactactccaataactacaattaataaaggtgttttagtaagtgaaatcaatttttccattgaactcaaccaatctaatcattttctta 30546365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 36790852 - 36790908
Alignment:
Q  83 taatcattttcttaataatcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||||||||| |||||||| ||| || ||| ||||||| |||||| ||||||||||||    
T  36790852 taatcatttccttaataaccgtgcataaaccttaaacgactattatttagagacgga 36790908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 38032765 - 38032805
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtatttta 44  Q
    ||||||||| | ||||||||||||||||||||| |||||||    
T  38032765 acttaactaatacactaactacaattaataagaatatttta 38032805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 8e-42; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 52247532 - 52247394
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||||||  || ||||||||||||||||||||||| |||||||||||||||||||||    
T  52247532 tcaacttaactactccactaactacaattaataaggatattttagtaaattgtattaattttaccattgaaattaacacaattaatcattttcttaataa 52247433  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    |||| |||||  ||||||| |||||  ||||||||||||    
T  52247432 tcgtgcacaatccttaaacgactataatttagagacgga 52247394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 32884819 - 32884964
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  32884819 caacttaactactccactaactacaattaataagagtgttttactaaatgctactaattctaccattgaaatcaacacaattaatcattttcttaataat 32884918  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
    ||| |||||| ||||||| |||| | ||  |||||||| |||||||    
T  32884919 cgtgcacaaaccttaaacgactaatattgtgagacggaggaagtat 32884964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 38405205 - 38405068
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||  |||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| |||| |||||||||||| |||||||||    
T  38405205 caacttaactacaccactaactacaattaataagggtattttagtaaatgatattaattttaccatttaaatcaacagaattaatcatttccttaataat 38405106  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| |||||| ||||||| |||||  ||||||||||||    
T  38405105 cgtgcacaaaccttaaacgactataatttagagacgga 38405068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 2653442 - 2653573
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgta 105  Q
    ||||||||| |  |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||  ||||||||| |     
T  2653442 ttaactactcctttaactacaattaataagagtattttaataaatgatactaattttacaattgaaatcaacacaattaatcattt--ttaataatcatg 2653539  T
Q  106 cacaaatcttaaacaactattttttagagacgga 139  Q
    ||||||||||||||||||||| ||||||||||||    
T  2653540 cacaaatcttaaacaactattatttagagacgga 2653573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 33790834 - 33790699
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||| || |||||| |||||| ||||||||||||||  |||| |||| ||||||||||||||||||||||    
T  33790834 caacttaactactccactaactacaattaataagggtgttttagcaaatgaaactaattttaccatcaaaatcaacacaattaatcattttcttaataat 33790735  T
Q  102 cgtacacaaatcttaaacaactattttttagagacg 137  Q
    ||| || ||| ||||||| |||||| ||||||||||    
T  33790734 cgtgcataaaccttaaacgactattatttagagacg 33790699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 47464468 - 47464346
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  47464468 caacttaactactccaccaactacaattaataagagttttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataat 47464369  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    ||| | |||| ||||||| ||||    
T  47464368 cgtgctcaaaccttaaacgacta 47464346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 35311326 - 35311209
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| |||| ||||||||||||||||||||||| || |||||||||  | |||||||||||||||||||||||||||||||||||| |||||||||    
T  35311326 caacttaattactccactaactacaattaataagagtgttctagtaaatgcaattaattttaccattgaaattaacataattaatcatttccttaataat 35311227  T
Q  102 cgtacacaaatcttaaac 119  Q
    ||| |||||| |||||||    
T  35311226 cgtgcacaaaccttaaac 35311209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 49428445 - 49428308
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| |||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| |||| || ||||||||| |||||||||    
T  49428445 caacttaattactccactaactacaattaataagggtattttagtaaattatattaattttaccattgaaatcaacacaaataatcatttccttaataat 49428346  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| || ||| ||||||| |||||  ||||||||||||    
T  49428345 cgtgcaaaaaccttaaacgactataatttagagacgga 49428308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 54506807 - 54506935
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| |||||||||||||| ||||   ||||||| ||||||||| |||||||||||||||||| |||| | ||||||||||||||||||| |    
T  54506807 aacttaactactccactaactacaattgataatgatattttaataaatgatattaattttaccattgaaatcaacacagttaatcattttcttaataacc 54506906  T
Q  103 gtacacaaatcttaaacaactatttttta 131  Q
    ||| ||||||||||||| |||||||||||    
T  54506907 gtaaacaaatcttaaacgactatttttta 54506935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 34360672 - 34360782
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| || | ||||||||||||  |||||||    
T  34360672 tcaacttaactactccactaactacaattaataagagtgttttagtaaatgctactaattttaccattgaaatcaatacaattaatcatttctttaataa 34360771  T
Q  101 tcgtacacaaa 111  Q
    |||| ||||||    
T  34360772 tcgtgcacaaa 34360782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 52859903 - 52859765
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||||||||||  |||| |||| |||||||||||| ||||||||    
T  52859903 tcaacttaactactccactaactacaattaataaggatgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataa 52859804  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    |||| || ||  ||||| | |||||| ||||||||||||    
T  52859803 tcgtgcataagccttaagcgactattatttagagacgga 52859765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 11288732 - 11288616
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| || | ||||||||||||||||||||||    
T  11288732 caacttaactactccaccaactacaattaataaga-tattttagtaaatgatattaattttgccattgaaatcaatacaattaatcattttcttaataat 11288634  T
Q  102 cgtacacaaatcttaaac 119  Q
    |||||| ||| |||||||    
T  11288633 cgtacataaaccttaaac 11288616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 11907702 - 11907565
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| || ||||||||||||||||| || ||||||||||||||||||||||||||||  |||| |||| |||||||||||| |||||||||    
T  11907702 caacttaactactccaataactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataat 11907603  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| ||  || ||||||  |||||| ||||||||||||    
T  11907602 cgtgcattaaccttaaatgactattatttagagacgga 11907565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 36985819 - 36985941
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctta 116  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| || || ||||||| | ||||||||    
T  36985819 actaactacaattaatacgggtattttagtaaatgatactaattttaccattgaaatcaacacaattaatcatttcctgaaaaatcgtataaaaatctta 36985918  T
Q  117 aacaactattttttagagacgga 139  Q
    ||| | |||| ||| ||||||||    
T  36985919 aacgagtattattttgagacgga 36985941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 47773122 - 47772985
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||  |||| |||| ||||||| |||| ||||||||     
T  47773122 caacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaattatttccttaataac 47773023  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
     || ||  || ||||||| |||||| ||||||||||||    
T  47773022 tgtgcatcaaccttaaacgactattatttagagacgga 47772985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 53346778 - 53346899
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| ||||||||| |||||||||| || |||||||||||| || ||||||||||||||||| ||||| ||| ||| |||||||||||||||    
T  53346778 aacttaactactccactaactaaaattaataagggtgttttagtaaatgctattaattttaccattgaaactaacacaatcaattattttcttaataatc 53346877  T
Q  103 gtacacaaatcttaaacaacta 124  Q
    || ||||||| |||||| ||||    
T  53346878 gtgcacaaattttaaacgacta 53346899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 17237399 - 17237283
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||||||||||||  | |||||||||||| ||||||||||||||||| ||| |||| ||||||| ||||||||||||||    
T  17237399 caacttaactactccactaactacaattaataaggttgttttagtaaatgttactaattttaccattgcaatcaacacaattaattattttcttaataat 17237300  T
Q  102 cgtacacaaatcttaaa 118  Q
    | | |||||| ||||||    
T  17237299 catgcacaaaccttaaa 17237283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 42617004 - 42616864
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcg 103  Q
    ||||||||||| |||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||| |||| | ||||||||||  |||||||||     
T  42617004 acttaactactccacttactacaattaataaaaatattttagtaaatgatattaattttaccattgaaatcaacacagttaatcatttctttaataatca 42616905  T
Q  104 tacacaaatcttaaacaactattttttagagacggatgaag 144  Q
    | |||||| ||||||| |||||  |||||| | ||||||||    
T  42616904 tgcacaaaacttaaacgactataatttagaaaaggatgaag 42616864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 49176037 - 49175913
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| | ||||||||||||||||||  |||||||||||||||||||||||||| |||||||||   || |||||||||||||||||| |||    
T  49176037 caacttaactactccgctaactacaattaataaggttattttagtaaatgatactaattttatcattgaaatctccacaattaatcattttcttaaaaat 49175938  T
Q  102 cgtacacaaatcttaaacaactatt 126  Q
    | | |||||| ||||||| ||||||    
T  49175937 catgcacaaaccttaaacgactatt 49175913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 53412126 - 53412250
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| | ||| ||||| ||||||||| | |||||||||||||||||||||||||||||||||||| || | |||||||| ||||||||| |||    
T  53412126 caacttaactattccacaaactataattaataaaaatattttagtaaatgatactaattttaccattgaaatcaataaaattaatcgttttcttaaaaat 53412225  T
Q  102 cgtacacaaatcttaaacaactatt 126  Q
    |||||  ||||| ||||||||||||    
T  53412226 cgtacgtaaatcgtaaacaactatt 53412250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 5841524 - 5841393
Alignment:
Q  8 aactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtaca 107  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| |||  ||| |||||||| ||||||| | || ||    
T  5841524 aactactccactaactacaattaataagggtattttagtaaatgatattaattttaccattaaaatcaacgcaatcaatcatttccttaatagttgtgca 5841425  T
Q  108 caaatcttaaacaactattttttagagacgga 139  Q
    |||| ||||||| |||||  ||||||||||||    
T  5841424 caaaccttaaacgactataatttagagacgga 5841393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 7061768 - 7061645
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| || | |||||||||||||||||||   |||| ||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  7061768 tcaacttaattaatccactaactacaattaataaagatattatagtaaatgatactaattttaccattgaaatcaacacaattaatcatttccttaataa 7061669  T
Q  101 tcgtacacaaatcttaaacaacta 124  Q
    ||||  ||||| ||||||| ||||    
T  7061668 tcgtgtacaaaccttaaacgacta 7061645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 28500984 - 28500857
Alignment:
Q  12 acttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaa 111  Q
    |||| ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||| |||| ||| |||||||| |||||||||||| ||||||    
T  28500984 acttaactaactgcaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaatcaatcatttccttaataatcgtgcacaaa 28500885  T
Q  112 tcttaaacaactattttttagagacgga 139  Q
      ||||||  ||||  ||||||||||||    
T  28500884 cattaaacggctataatttagagacgga 28500857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 16821435 - 16821297
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| |||| ||||||||| ||||||||||  |||| ||||||||||||||||||||| ||||||||| |||| |||||||||||   |||||||    
T  16821435 tcaacttaaatactccactaactataattaataaggatattatagtaaatgatactaattttatcattgaaatcaacacaattaatcattgcattaataa 16821336  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    |||| |||||| ||||||| |||| ||||  ||||||||    
T  16821335 tcgtgcacaaaccttaaacgactaattttgtgagacgga 16821297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 35380436 - 35380334
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||| ||| |||||||||||||||||||   | |||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||    
T  35380436 caacttaaccactccactaactacaattaataatgatgttttagtaaatgctactaattttaccattaaaatcaacataattaatcattttcttaataat 35380337  T
Q  102 cgt 104  Q
    |||    
T  35380336 cgt 35380334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 42517729 - 42517639
Alignment:
Q  14 ttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    ||||||||||| |||||||||| |||||||||||||||||  |||||||||||||||||| |||| |||||||||||||||||||||||||    
T  42517729 ttcactaactataattaataagggtattttagtaaatgatcttaattttaccattgaaatcaacacaattaatcattttcttaataatcgt 42517639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 43237261 - 43237383
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||||||||||||| |||||||||   | |||||||||||  ||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  43237261 caacttaactacttcactaactataattaataatgattttttagtaaatattactaattttaccattgaaataaacacaattaatcatttccttaataat 43237360  T
Q  102 cgtacacaaatcttaaacaacta 124  Q
    ||| || ||| ||||||| ||||    
T  43237361 cgtgcataaaccttaaacgacta 43237383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 17114462 - 17114595
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgta 105  Q
    ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||  |||| |||| |||||||||||| ||||||||  ||     
T  17114462 ttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataactgtg 17114561  T
Q  106 cacaaatcttaaacaactattttttagagacgga 139  Q
    ||  || ||||||| |||||| |||| |||||||    
T  17114562 catcaaccttaaacgactattatttaaagacgga 17114595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 25233199 - 25233336
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||||||||||||| ||||||||  ||| ||||||||||||||||||||||||||||  ||||||||| ||||||| ||||  |||||||     
T  25233199 caacttaactacttcactaactataattaatactagtgttttagtaaatgatactaattttaccatcaaaattaacacaattaattatttctttaataac 25233298  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
     |||||  || ||||||| | |||| ||||||||||||    
T  25233299 tgtacatcaaccttaaacgaatattatttagagacgga 25233336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 46396969 - 46396869
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    |||||||||||||||||||| |||||||||||| || |||||||||||||||||| |||| |||||||||||| |||||| ||||| |||||| ||||||    
T  46396969 taactacaattaataagagtgttttagtaaatgctattaattttaccattgaaatcaacacaattaatcatttacttaatgatcgtgcacaaaccttaaa 46396870  T
Q  119 c 119  Q
    |    
T  46396869 c 46396869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 2942748 - 2942598
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||| ||| |||||||||||||||||||| || |||||||||||| ||||||||||| ||| ||||| |||| ||||||||||||  |||||||    
T  2942748 tcaacttaaccactccactaactacaattaataag-gtgttttagtaaatgctactaattttatcatcgaaatcaacacaattaatcatttctttaataa 2942650  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacggatgaagtatcatct 152  Q
    || || ||||| ||||||| |||| | ||  |||||||||| ||||| ||||    
T  2942649 tcttatacaaaccttaaacgactaatattgtgagacggatgtagtattatct 2942598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 461975 - 462113
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| | |||| |||||||||||||  ||||||||||||| ||| || ||||||||||||||| || | |||||||||||||||||| ||    
T  461975 tcaacttaactactccgctaattacaattaataaggatattttagtaaataatattacttttaccattgaaatcaatacaattaatcattttcttaaaaa 462074  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    |  | |||||||||||||  |||||| ||| ||||||||    
T  462075 ttatgcacaaatcttaaattactattatttcgagacgga 462113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 29575143 - 29575248
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    ||||||||||||| |||||||||||| |||||| || |||||||| |||| ||||||||||||||||||||||||||| |||||||  |||||| |||||    
T  29575143 taactacaattaacaagagtattttaataaatgttattaattttatcatttaaattaacataattaatcattttcttagtaatcgtgtacaaattttaaa 29575242  T
Q  119 caacta 124  Q
    | ||||    
T  29575243 cgacta 29575248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 40122956 - 40122835
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||||| || ||||||||||||| |||||| || |||||||||||| ||||||||||| |||| |||| |||  |||||||||||| ||||||||||    
T  40122956 aacttaactgctccactaactacaatcaataagggtgttttagtaaatgctactaattttaacattaaaatcaacgcaattaatcatttccttaataatc 40122857  T
Q  103 gtacacaaatcttaaacaacta 124  Q
    || |||||| ||||||| ||||    
T  40122856 gtgcacaaagcttaaacgacta 40122835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 2066808 - 2066952
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||  ||||||||| |||||||||| || ||||| ||||| ||||||| ||||||||  |||| |||| |||||||||||| ||||||||||    
T  2066808 aacttaactaccccactaactaaaattaataagggtgttttaataaataatactaactttaccatcaaaatcaacacaattaatcatttccttaataatc 2066907  T
Q  103 gtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
    || || ||| ||||||| |||||| |||| ||| ||||| |||||    
T  2066908 gtgcataaaccttaaacgactattatttaaagatggatggagtat 2066952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 3689581 - 3689709
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||| |||  |||||||| ||||||||||||| ||||||||||||||||||||||||||||  |||| || | ||||||||||||  ||||||| |    
T  3689581 aacttaacaactcaactaactataattaataagagtgttttagtaaatgatactaattttaccatcaaaatcaatacaattaatcatttctttaataacc 3689680  T
Q  103 gtacacaaatcttaaacaactatttttta 131  Q
    ||||| ||| ||||||| |||||| ||||    
T  3689681 gtacataaaccttaaacgactattattta 3689709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 51625139 - 51625235
Alignment:
Q  40 ttttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactattttttagagac 136  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||  |||||| |||||  |||||||||    
T  51625139 ttttagtaaatgttactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaactttaaacgactataatttagagac 51625235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 4972595 - 4972722
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    |||||||||||||||||||| ||||||||||||  || |||||| | |||||||| |||| ||||||||||||  ||||||||||| |||||||||||||    
T  4972595 taactacaattaataagagtgttttagtaaatgtcaccaatttttcaattgaaatcaacacaattaatcatttcattaataatcgtgcacaaatcttaaa 4972694  T
Q  119 caactattttttagagacggatgaagta 146  Q
    | |||| | ||  |||||||||| ||||    
T  4972695 cgactaatattgtgagacggatggagta 4972722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 6609779 - 6609917
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| || ||| ||||||||||||   | |||| |||||||||||||||||||||||  |||| |||| |||||||||||| |||||||||    
T  6609779 caacttaactactccaataattacaattaataaagatgtttttgtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataat 6609878  T
Q  102 cgtacacaaatcttaaac-aactattttttagagacgga 139  Q
    ||| || |||  |||||| ||||||| ||||||||||||    
T  6609879 cgtgcataaactttaaacgaactattatttagagacgga 6609917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 6643763 - 6643661
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||   |||||||||||||||||||   | |||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  6643763 caacttaactataccactaactacaattaataaagatgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataat 6643664  T
Q  102 cgt 104  Q
    |||    
T  6643663 cgt 6643661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 38502585 - 38502448
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| || |||||| ||||||||| ||||||||| ||||||||||||||||||||||  |||| |||| ||||||| |||| ||||||||     
T  38502585 caacttaactactacattaactataattaataaaagtattttaataaatgatactaattttaccatcaaaatcaacacaattaattatttccttaataac 38502486  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
      | ||  || ||||||| |||||| ||||||||||||    
T  38502485 tatgcatcaaccttaaacgactattatttagagacgga 38502448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 146
Target Start/End: Original strand, 18532201 - 18532341
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgta 105  Q
    ||||| ||| |||| |||| ||||||||| | ||||||| ||||| ||||||||||||||||| ||||| | ||||||||||||||   ||| |||| |     
T  18532201 ttaaccactccacttactataattaataaaactattttaataaatcatactaattttaccattaaaatttatataattaatcatttatgtaaaaatcatg 18532300  T
Q  106 cacaaatcttaaacaactattttttagagacggatgaagta 146  Q
    |||||| |||||||||||||| ||| |||||||||| ||||    
T  18532301 cacaaaccttaaacaactattattttgagacggatggagta 18532341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 30682300 - 30682176
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||| |||||||||  ||||||||||| |||||||  |||| |||||||||||| ||||||||||| | ||||||||| ||||||||||||| ||||||     
T  30682300 tcaaattaactactctactaactacaactaataaggatattatagtaaatgatattaattttaccaataaaattaacacaattaatcatttttttaatag 30682201  T
Q  101 tcgtacacaaatcttaaacaactat 125  Q
    |||| || ||| ||||||| |||||    
T  30682200 tcgtgcaaaaaccttaaacgactat 30682176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 22130061 - 22130209
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaac----ataattaatcattttcttaa 97  Q
    |||||||| |||| ||||||||||||||||||||  | |||| |||||||||||||||| |||||||||||| |||    | |||||||||||| |||||    
T  22130061 caacttaattactccactaactacaattaataaggatgtttttgtaaatgatactaattataccattgaaatcaacacatacaattaatcatttccttaa 22130160  T
Q  98 taatcgtacacaaatcttaaacaactattttttagagacggatgaagta 146  Q
    ||| ||| |||||| ||||||| |||| | ||  |||||||||| ||||    
T  22130161 taaccgtgcacaaaccttaaacgactaatattgtgagacggatggagta 22130209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 8175659 - 8175549
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactat 125  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||||| |||| ||||| ||||||| ||||||||| | |||||  | |||||||||||    
T  8175659 aattaacaagagtattttaataaatgatattaattttaccattgaaatcaacacaattattcatttttttaataatcatgcacaagccataaacaactat 8175560  T
Q  126 tttttagagac 136  Q
    | ||| |||||    
T  8175559 tattttgagac 8175549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 44536298 - 44536180
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||| ||||| |||||||||||||||||||| || ||||| |||||  | |||||||||||||| |||| |||| |||||||||||| ||||||||||    
T  44536298 aacttagctactccactaactacaattaataagggtgttttaataaatcctgctaattttaccattaaaatcaacacaattaatcatttccttaataatc 44536199  T
Q  103 gtacacaaatcttaaacaa 121  Q
    || || |||  ||||||||    
T  44536198 gtgcataaactttaaacaa 44536180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 50264184 - 50264102
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataatt 83  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| |||| ||||    
T  50264184 tcaacttaaatatttcactaactacaattaataagagtattttagtaaatgatgttaattttaacattgaaatcaacacaatt 50264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 32470034 - 32469918
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    |||||||| ||||||||| | ||||| ||||||||||||||||||||||| |||| |||| |||||||||||||||| | |||  | || ||||||||||    
T  32470034 taactacagttaataagaatgttttaataaatgatactaattttaccattaaaatcaacacaattaatcattttctttaaaattatgcataaatcttaaa 32469935  T
Q  119 caactattttttagaga 135  Q
    ||| |||| ||| ||||    
T  32469934 caaatattattttgaga 32469918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 19265825 - 19265924
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| ||||||||| ||||||||||  ||||||| ||||| | | ||||||||  |||||||| || |||||||||||||||||||||||    
T  19265825 tcaacttaactactccactaactataattaataaggttattttaataaataacattaattttattattgaaataaatataattaatcattttcttaataa 19265924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 21240807 - 21240708
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||||  |||||||||||||||||||  | | ||||||||||||||||||||||||||  |||| |||| | |||||||||| |||||||||    
T  21240807 caacttaactactcaactaactacaattaataaggatgtgttagtaaatgatactaattttaccatcaaaatcaacacagttaatcatttccttaataat 21240708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 26147718 - 26147635
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaa 85  Q
    |||||||| |||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||  |||| |||| ||||||    
T  26147718 caacttaattactccactaactacaattaataagaatgttttagtaaatgatactaattttaccatcaaaatcaacacaattaa 26147635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 27880323 - 27880221
Alignment:
Q  23 tacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaac 122  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||| || |||||||||  |||| |||| || ||||| ||||||| ||    
T  27880323 tacaattgataagagtattctagtaaatgatactaattttaccattgaaatcaacacaa-taatcatttatttaaaaatcatatacaaaccttaaacgac 27880225  T
Q  123 tatt 126  Q
    ||||    
T  27880224 tatt 27880221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 30192238 - 30192325
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    |||||||||||||||||||| |||||||| |||||| | ||||||||  |||||||| |||| |||||||||||||||||| ||||||    
T  30192238 actaactacaattaataagaatattttagcaaatgacattaattttataattgaaatcaacacaattaatcattttcttaaaaatcgt 30192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 38663550 - 38663480
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaa 72  Q
    |||||||||||||| ||||||||| |||||||| ||| |||||||||||| ||||||||||||||||||||    
T  38663550 caacttaactactttactaactacgattaataaaagtgttttagtaaatgctactaattttaccattgaaa 38663480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 49746979 - 49747086
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||||  |||||||| ||||||| |  ||||||||||||||  ||||||||||| ||||||||| |||| ||||||| ||||| ||||||||    
T  49746979 caacttaactactcaactaactataattaatgaaggtattttagtaaatactactaattttatcattgaaatcaacacaattaattatttt-ttaataat 49747077  T
Q  102 cgtacacaa 110  Q
    ||| |||||    
T  49747078 cgtgcacaa 49747086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 39157973 - 39157874
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaatt-aacataattaatcattttcttaataatcgt 104  Q
    |||||||||  |||| ||| |||||||||| |||||||||||||||| || |||||||||||  ||||| |||| || ||||||||||||||||||||||    
T  39157973 ttaactactctactagctataattaataagtgtattttagtaaatgaaacaaattttaccatcaaaattaaacacaactaatcattttcttaataatcgt 39157874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 47359053 - 47358958
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctta 96  Q
    ||||||||| |||| |||| |||||||||||||| |||||||||| |||| || ||||||||| ||||||||| |||| ||| ||| |||||||||    
T  47359053 tcaacttaattactccactgactacaattaataaaagtattttagaaaattattctaattttatcattgaaatcaacacaatcaataattttctta 47358958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 35998829 - 35998934
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||  |||||||||||||||   ||||||| |||||| ||||||||||||  || |||| ||||||| |||| ||||| ||||||||    
T  35998829 caacttaactactccatcaactacaattaataatgatattttaataaatgttactaattttactgttaaaatcaacataaataataatttttttaataat 35998928  T
Q  102 cgtaca 107  Q
    ||||||    
T  35998929 cgtaca 35998934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 41711523 - 41711426
Alignment:
Q  38 tattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactattttttagaga 135  Q
    |||||||  |||||||| ||||||||||||| |||| ||||||||||||||||| | ||| ||| || |||||| |||||||||||||| ||| ||||    
T  41711523 tattttaaaaaatgatattaattttaccattaaaatcaacataattaatcatttccataaaaattgtgcacaaaccttaaacaactattgttttgaga 41711426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 52869107 - 52869212
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    ||||||||||||||||  |||||||| |||| |||| |||| |||| |||||||| |||| ||||||| |||| ||||||||| || |||||| ||||||    
T  52869107 taactacaattaataaaggtattttaataaacgatattaatcttactattgaaatcaacacaattaattatttccttaataattgtgcacaaaccttaaa 52869206  T
Q  119 caacta 124  Q
    | ||||    
T  52869207 cgacta 52869212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 39397379 - 39397471
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaa 111  Q
    ||||||||||||||| | | |||||||||||||| | ||| ||||||| |||||| ||||||||||||||||| |||||  ||||| ||||||    
T  39397379 taactacaattaatatggggattttagtaaatgacattaaatttaccaatgaaatcaacataattaatcatttccttaaacatcgtgcacaaa 39397471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 11024988 - 11024897
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaat 98  Q
    ||||||||||||||| || ||||||||| | ||||||||||||||| ||  ||| ||||||| |||| ||||  ||||||||||||||||||    
T  11024988 taactacttcactaattataattaataaaaatattttagtaaatgaaacatattataccattaaaatcaacactattaatcattttcttaat 11024897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 18741577 - 18741494
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaa 85  Q
    ||||||||||||| || ||||||||||||||||   ||||||| ||||||| |||||||||||| ||||||| || ||||||||    
T  18741577 caacttaactactccattaactacaattaataaagatattttaataaatgacactaattttaccgttgaaatcaatataattaa 18741494  T

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Target: chr4; HSP #64
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 48914250 - 48914151
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatga-----tactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||| ||||||||||||||||| |||||||  |||||||||| ||||     ||||||||||||||||||||| |||| ||||||| |||| |||||    
T  48914250 aacttaattacttcactaactacaaataataaggatattttagtatatgatggagtactaattttaccattgaaatgaacacaattaattatttccttaa 48914151  T

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Target: chr4; HSP #65
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 35251942 - 35252044
Alignment:
Q  37 gtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactattttttagagac 136  Q
    |||||||||||||||||| |||||||| ||||||||| | || ||||||| |||||||| | |||| | ||||||||| |||| |||||  ||| |||||    
T  35251942 gtattttagtaaatgatattaattttatcattgaaataaccacaattaattattttcttgaaaatcatgcacaaatctcaaacgactataattttgagac 35252041  T
Q  137 gga 139  Q
    |||    
T  35252042 gga 35252044  T

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Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 3098757 - 3098836
Alignment:
Q  23 tacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||||||||||   |||||||||||||||||  ||||||| ||||||||| || ||||||||||||||| ||| |||||    
T  3098757 tacaattaataaagatattttagtaaatgatatcaattttatcattgaaatcaatataattaatcatttttttactaatc 3098836  T

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Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 20612272 - 20612174
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||||| || |||||||||||||  || ||||||||||| ||||||| |||| || |||||| |||  || |||||||||| |||| ||||    
T  20612272 acttaactacttcattatctacaattaataatggtgttttagtaaattatactaactttagcaatgaaatcaactcaactaatcatttttttaagaatc 20612174  T

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Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 10215250 - 10215169
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||| ||||||||||||||||||| | ||||| ||  ||||||||||| ||||||| |  |||||||||||| |||||||    
T  10215250 taactataattaataagagtattttaattaatgaaacatattttaccattaaaattaaaaatattaatcatttttttaataa 10215169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 21325224 - 21325171
Alignment:
Q  45 gtaaatgatactaattttaccattgaaattaacataattaatcattttcttaat 98  Q
    ||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||    
T  21325224 gtaaatgatactaattttaccattgaaataaacacaatttatcatttccttaat 21325171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 43902269 - 43902375
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatacta---attttaccattgaaattaacataattaatcattttcttaat 98  Q
    |||||||| |||| |||||||||  |||||||||| ||||||| ||||| ||| ||   |||||| |||| |||| ||||||||||||||||  ||||||    
T  43902269 caacttaattactccactaactatgattaataagaatattttaataaataataatattaattttatcattaaaatcaacataattaatcattgccttaat 43902368  T
Q  99 aatcgta 105  Q
     ||||||    
T  43902369 gatcgta 43902375  T

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Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 7986993 - 7987068
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaaca 78  Q
    ||||||||||||  |||||| | ||||||||| | |||||||||| ||||||||||||||| |||| |||| ||||    
T  7986993 aacttaactactctactaacaataattaataataatattttagtagatgatactaattttatcattaaaatcaaca 7987068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 16506332 - 16506248
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||| |||| || ||||||||||||||||  || |||||||||||| |||| |||  | |||||||||||||||||||||| ||||    
T  16506332 ttaattactccattaactacaattaataaatgtgttttagtaaatgttact-attgcatcattgaaattaacataattaataattt 16506248  T

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Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 20598168 - 20598253
Alignment:
Q  39 attttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaacta 124  Q
    ||||||||| |||||| ||||| ||| |||||||| |||| |||||| |||||  |||| | ||||  ||||||||||||||||||    
T  20598168 attttagtagatgatattaattatacaattgaaatcaacaaaattaaacatttctttaaaagtcgtgtacaaatcttaaacaacta 20598253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 17512424 - 17512352
Alignment:
Q  20 aactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    |||||||||||||||  |||||||||||||| ||| |||||||||| || |||| |||  || ||||||||||    
T  17512424 aactacaattaataatggtattttagtaaattatattaattttacctttaaaatcaactcaactaatcatttt 17512352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 29295253 - 29295296
Alignment:
Q  23 tacaattaataagagtattttagtaaatgatactaattttaccat 67  Q
    |||||||||||||| | ||||||||||||||||||||||||||||    
T  29295253 tacaattaataaga-tgttttagtaaatgatactaattttaccat 29295296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 37868688 - 37868640
Alignment:
Q  15 tcactaactacaattaataagagtattttagtaaatgatactaatttta 63  Q
    ||||||| |||||||||||| | ||||||||||||||||| ||||||||    
T  37868688 tcactaattacaattaataaaaatattttagtaaatgatattaatttta 37868640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 5618582 - 5618661
Alignment:
Q  24 acaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcg 103  Q
    ||||||||||||  ||||||| ||||| ||  ||||||||||||| |||| |||| || | |||||||| ||||||||||    
T  5618582 acaattaataaggatattttaataaataattttaattttaccattaaaatcaacacaactcatcatttttttaataatcg 5618661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 34321758 - 34321715
Alignment:
Q  58 attttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||    
T  34321758 attttaccattaaaatcaacacaattaatcattttcttaataat 34321715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 31370358 - 31370312
Alignment:
Q  52 atactaattttaccattgaaattaacataattaatcattttcttaat 98  Q
    |||||||||||||||  ||||| |||||||||||||||||| |||||    
T  31370358 atactaattttaccaacgaaatcaacataattaatcatttttttaat 31370312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 49579281 - 49579192
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccatt-gaaattaacataattaatcattt 91  Q
    ||||||||| | |||| |||||||||||||||| ||| ||||||| ||| ||| |||||||| ||||  |||| |||| ||||||||||||    
T  49579281 caacttaacaatttcaataactacaattaataaaagtgttttagt-aataataataattttatcattaaaaatcaacacaattaatcattt 49579192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 50263953 - 50263891
Alignment:
Q  84 aatcattttcttaataatcgtacacaaatcttaaacaactattttttagagacggatgaagta 146  Q
    ||||||||||||||||||||| |||||| ||||||| |||||  |||||| ||| ||| ||||    
T  50263953 aatcattttcttaataatcgtgcacaaaccttaaacgactataatttagaaacgtatggagta 50263891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 12567275 - 12567214
Alignment:
Q  12 acttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaat 73  Q
    |||||| |||||||||| |||| || | ||||| ||||||||| ||||||||||||| ||||    
T  12567275 acttcattaactacaatcaatatgactgttttattaaatgatattaattttaccattaaaat 12567214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 16411416 - 16411347
Alignment:
Q  56 taattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactat 125  Q
    |||||||| ||||||||| |||||||||||| |||||||| | ||  |  |||||||||||||| |||||    
T  16411416 taattttatcattgaaatcaacataattaattattttctttaaaactgggcacaaatcttaaacgactat 16411347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 92
Target Start/End: Complemental strand, 21761095 - 21761010
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    ||||||| ||| |||||| |||| |||| ||||||||| ||||||| | | ||||||||||| ||||||  || | ||||||||||    
T  21761095 taactacatcattaactataatttataaaagtattttaataaatgaaattcattttaccattaaaattagtattactaatcatttt 21761010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 23915528 - 23915435
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||| ||||||||| |||||||||   | ||||||||||| | ||  ||||||||||| |||| ||||  | ||||||||| ||||||||    
T  23915528 taactactccactaactataattaataatgatgttttagtaaattaaacatattttaccattaaaatcaacactactaatcatttccttaataa 23915435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 2400798 - 2400890
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttctta 96  Q
    ||||||||||| ||| ||||||||| ||| || || ||||||||||| ||  ||||| |||||||  |||||| | || | ||||||||||||    
T  2400798 acttaactactccacaaactacaatcaatgagggtgttttagtaaataatgttaattgtaccattataattaatacaactgatcattttctta 2400890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 16411471 - 16411435
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaatttt 62  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  16411471 aattaataagagtattttaataaatgataccaatttt 16411435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 25142482 - 25142430
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgata 54  Q
    |||||||||||| ||||||||| |||| ||||||  |||||||||| ||||||    
T  25142482 caacttaactacatcactaactgcaatcaataaggatattttagtacatgata 25142430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 25869902 - 25869842
Alignment:
Q  47 aaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtaca 107  Q
    ||||| |||||||||||  |||||||| |||| ||||||||||||||| || |||| ||||    
T  25869902 aaatgttactaattttaaaattgaaatcaacacaattaatcattttctaaaaaatcataca 25869842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 36217461 - 36217385
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||| |||||| ||| || |||||||||  |||||  |||| |||| ||||| |||||||||||| |||||||||    
T  36217461 aattaacaagagtgtttaagcaaatgatacatattttttcattaaaataaacattattaatcatttttttaataatc 36217385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 45789193 - 45789157
Alignment:
Q  55 ctaattttaccattgaaattaacataattaatcattt 91  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  45789193 ctaattttatcattgaaattaatataattaatcattt 45789157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 39691507 - 39691644
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||| |||| |||||||||||||||||||||    
T  39691507 tcaactttactactccactaactgcaattaataagagtattttagtaaatgatattaattttatcattgaaatcaacacaattaatcattttcttaataa 39691606  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacgg 138  Q
    |||| |||||| ||||||| | |||  |||||||||||    
T  39691607 tcgtgcacaaaccttaaacgattataatttagagacgg 39691644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 37322447 - 37322591
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt-cttaataat 101  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||| |||| ||| ||||||||| |||||||||    
T  37322447 aacttaactactccactaactacaattaataagggtattttaataaatgatattaattttaccattgaaatcaacacaatcaatcattttccttaataat 37322546  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagta 146  Q
    ||| || ||| ||||||| |||||  |||||||||||||||||||    
T  37322547 cgtgcataaaccttaaacgactataatttagagacggatgaagta 37322591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 45235600 - 45235736
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||| |||| ||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||| ||| |||||||| ||||||||||    
T  45235600 aacttaactatttcattaactacaattaataagggtgttttagtaaatgatattaattttaccattgaaatcaacacaatcaatcatttccttaataatc 45235699  T
Q  103 gtacacaaatcttaaacaactattttttagagacgga 139  Q
    || |||||| ||||||| |||||| ||||||||||||    
T  45235700 gtgcacaaaccttaaacgactattatttagagacgga 45235736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 16463708 - 16463843
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    ||||| |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||  |||| |||| |||||||||||| |||||||| |    
T  16463708 aactttactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatttccttaataacc 16463807  T
Q  103 gtacacaaatcttaaacaactattttttagagacgg 138  Q
    || || ||| ||||||| |||||| |||||||||||    
T  16463808 gtgcataaaccttaaacgactattatttagagacgg 16463843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 36354538 - 36354392
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||||||||||||||| ||| | ||||| ||||||||||||||||  |||| |||| || || |||||| |||||||||    
T  36354538 caacttaactactccactaactacaattaataagagtgtttcaataaataatactaattttaccatcaaaatcaacacaactagtcatttccttaataat 36354439  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagtatc 148  Q
    |||||| ||| ||||||  |||||| |||||||||||||| ||||||    
T  36354438 cgtacataaaccttaaatgactattatttagagacggatggagtatc 36354392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 14523466 - 14523330
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||| |||| ||  |||||||| |||||||| |    
T  14523466 aacttaactactccactaactacaattaataaggatattttagtaaatgatattaattttaccattgaaatcaacacaaaaaatcatttccttaataacc 14523367  T
Q  103 gtacacaaatcttaaacaactattttttagagacgga 139  Q
     | || |||  |||||| |||||||||||||||||||    
T  14523366 ttgcataaactttaaacgactattttttagagacgga 14523330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 16805899 - 16806023
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||| ||| |||| |||| ||||||||||||  ||||||||    
T  16805899 caacttaacaactccactaactacaattaataaggatattttagtaaatgatactaattttactattaaaatcaacacaattaatcatttctttaataat 16805998  T
Q  102 cgtacacaaatcttaaacaactatt 126  Q
    ||| |||||| ||||||| ||||||    
T  16805999 cgtgcacaaaccttaaactactatt 16806023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 16845180 - 16845304
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||| ||| |||| |||| ||||||||||||  ||||||||    
T  16845180 caacttaacaactccactaactacaattaataaggatattttagtaaatgatactaattttactattaaaatcaacacaattaatcatttctttaataat 16845279  T
Q  102 cgtacacaaatcttaaacaactatt 126  Q
    ||| |||||| ||||||| ||||||    
T  16845280 cgtgcacaaaccttaaactactatt 16845304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 15359182 - 15359037
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||| |||||||| |||  |||| |||| |||||||||| ||||||||||     
T  15359182 caacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttatcatcaaaatcaacacaattaatcatcttcttaataac 15359083  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
    ||| ||  || ||||||| |||||| |||| ||||||| |||||||    
T  15359082 cgtgcatcaaccttaaacgactattatttaaagacggaagaagtat 15359037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 16377747 - 16377634
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgta 105  Q
    ||||||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||||||| ||| |||| ||||||||||||  |||||||||||     
T  16377747 ttaactactccactaactacaattaataaggttattttggtaaatgatattaattttaccattgtaatcaacacaattaatcatttctttaataatcgtg 16377648  T
Q  106 cacaaatcttaaac 119  Q
    ||||||||||||||    
T  16377647 cacaaatcttaaac 16377634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 43115898 - 43115773
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| |||| ||||||||| |||| ||||||||||||  |||||||    
T  43115898 tcaacttaactactccactaactacaataaataagagtattttagtaaatgctactaactttatcattgaaatcaacacaattaatcatttctttaataa 43115799  T
Q  101 tcgtacacaaatcttaaacaactatt 126  Q
    |||  ||||||  |||||| ||||||    
T  43115798 tcgcgcacaaactttaaacgactatt 43115773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 17695348 - 17695492
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||||  |||||||| ||||||||||| |||||| ||||||||||  ||||||||||||||||| || | |||||||||||| |||||||||    
T  17695348 caacttaactactctactaactataattaataagaatatttttgtaaatgatatcaattttaccattgaaatcaatacaattaatcatttccttaataat 17695447  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagta 146  Q
    ||| |||||| ||||||| | |||  ||| |||||||||| ||||    
T  17695448 cgtgcacaaaccttaaacgattataattttgagacggatggagta 17695492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 25637499 - 25637642
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |  ||||||||||||||||  || ||||||||||||| ||||||||||||||  |||| |||| |||||||||||| ||| |||||    
T  25637499 caacttaactactcctataactacaattaataaaggtgttttagtaaatgacactaattttaccatcaaaatcaacacaattaatcatttcctt-ataat 25637597  T
Q  102 cgtacacaaatcttaaacaactattttttagagacggatgaagta 146  Q
    ||| || ||| |||||||||||||| |||||||||||||| ||||    
T  25637598 cgtgcataaaccttaaacaactattatttagagacggatggagta 25637642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 39785603 - 39785743
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatga---tactaattttaccattgaaattaacataattaatcattttcttaat 98  Q
    ||||||||||||| || |||||||||||||||||||| |||||||||||||   |||||||||||||||  |||| |||| |||||||||||| ||||||    
T  39785603 caacttaactactccattaactacaattaataagagtgttttagtaaatgatagtactaattttaccatcaaaatcaacacaattaatcatttccttaat 39785702  T
Q  99 aatcgtacacaaatcttaaacaactattttttagagacgga 139  Q
    || ||| ||  || ||||||| |||||| ||||||||||||    
T  39785703 aaccgtgcatcaaccttaaacgactattatttagagacgga 39785743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 36794302 - 36794439
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||| |||||||| |  |||||||||| |||||||||||||||||  |||| |||| |||||||||||| ||||||||     
T  36794302 caacttaactactccactaactacagttaataagggcgttttagtaaaagatactaattttaccatcaaaatcaacacaattaatcatttccttaataac 36794401  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    | | ||  |||||||||| |||||| ||||||||||||    
T  36794402 catgcatcaatcttaaacgactattatttagagacgga 36794439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 43410443 - 43410588
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||||| || |||||||||||||||||  ||||||||||||||||| |||||||| |||||| || |||| ||||||| |||| ||||||||    
T  43410443 tcaacttaactactccattaactacaattaataaggatattttagtaaatgatattaattttatcattgatatcaacacaattaataatttccttaataa 43410542  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacggatgaagta 146  Q
    |||| ||||||  |||||  |||||  |||||||||| | ||||||    
T  43410543 tcgtgcacaaacattaaaggactataatttagagacgtaggaagta 43410588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 5789743 - 5789627
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| |||||||||||||||||||||| || ||||||||||||  ||||||||||| |||||| | || | |||||||||||| |||||||||    
T  5789743 caacttaactatttcactaactacaattaataagggtgttttagtaaatgccactaattttactattgaattcaatacaattaatcatttccttaataat 5789644  T
Q  102 cgtacacaaatcttaaa 118  Q
    ||| |||||| ||||||    
T  5789643 cgtgcacaaaccttaaa 5789627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 41221039 - 41220895
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcg 103  Q
    |||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||||||  |||||||| |||| |||||||||| || |||| |||||    
T  41221039 acttaactacttcattaactacaattaataaaaatattttaataaatgatactaattttataattgaaatcaacacaattaatcatgtttttaaaaatcg 41220940  T
Q  104 tacacaaa-tcttaaacaactattttttagagacggatgaagtat 147  Q
    |||| ||| | |||| | |||||| ||  ||||||||||||||||    
T  41220939 tacataaatttttaagcgactattattgtgagacggatgaagtat 41220895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 31448788 - 31448665
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| |||||||||| |||||| |||| || |||||||||||||  |||||||||||||  |||| |||| |||||||||||| |||||||||    
T  31448788 caacttaactatttcactaactgcaattagtaagggtgttttagtaaatgactctaattttaccatcaaaatcaacacaattaatcatttccttaataat 31448689  T
Q  102 cgtacacaaatcttaaacaactat 125  Q
    ||| |||||| ||||||| |||||    
T  31448688 cgtgcacaaaccttaaacgactat 31448665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 34225607 - 34225726
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| |||| || ||||||||||||||||| || ||||||||||| ||||||| ||||||||| |||| || ||||||| |||||| ||||||||    
T  34225607 tcaacttaaatactccattaactacaattaataagggtgttttagtaaataatactaagtttaccattaaaatcaatataattattcatttccttaataa 34225706  T
Q  101 tcgtacacaaatcttaaaca 120  Q
    |||| |||||| ||||||||    
T  34225707 tcgtgcacaaaccttaaaca 34225726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 19937730 - 19937818
Alignment:
Q  37 gtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactat 125  Q
    |||||||||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||||||| |||||| ||||||| |||||    
T  19937730 gtattttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactat 19937818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 35313906 - 35314007
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| ||||||||||||||||||||  |  |||| |||||  ||||||||||||||||||||| |||| |||||||||||| ||||||||||    
T  35313906 aacttaactactccactaactacaattaataaggttgctttaataaatactactaattttaccattgaaatcaacacaattaatcatttccttaataatc 35314005  T
Q  103 gt 104  Q
    ||    
T  35314006 gt 35314007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 8947147 - 8947048
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||| ||||||||||  | |||||||||||  ||||||||||| ||||||||| |||| |||||||||||| |||||||||    
T  8947147 caacttaactactccactaactataattaataaggatgttttagtaaatattactaattttatcattgaaatcaacacaattaatcatttccttaataat 8947048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 34120532 - 34120397
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| | |||||||||||||||||||   ||||||||||||| |||||| |||||||||  |||| |||| ||||||||||||||||||||||    
T  34120532 caacttaactattccactaactacaattaataaa--tattttagtaaataatactagttttaccatcaaaatcaacacaattaatcattttcttaataat 34120435  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    | | || |||  ||||||   |||| ||||||||||||    
T  34120434 catgcataaactttaaacggttattatttagagacgga 34120397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 1206781 - 1206708
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    |||||||||||||||||  |||||||||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  1206781 taactacaattaataaggatattttagtaaatgttactaattttaccactgaaatcaacataattaatcatttt 1206708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 17346457 - 17346349
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||||||||||||| | ||||||| ||||||||| |||||||||  ||||||| || ||||||||| ||||  ||||||||    
T  17346457 caacttaactactccactaactacaattaataaaaatattttaataaatgatattaattttacttttgaaatcaaaataattaat-atttctttaataat 17346359  T
Q  102 cgtacacaaa 111  Q
    ||||| ||||    
T  17346358 cgtacgcaaa 17346349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 27501586 - 27501516
Alignment:
Q  49 atgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaac 119  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| |||||||||| |||||||| |||||||    
T  27501586 atgatactaattttaccattgaaatcaacataatttatcatttccttaataatcatacacaaaccttaaac 27501516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 43699670 - 43699595
Alignment:
Q  26 aattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| | |||||||| ||||||||||||||||||| |||||||| |||| | ||||||||||||||||||||    
T  43699670 aattaataggtgtattttaataaatgatactaattttactattgaaatcaacacagttaatcattttcttaataat 43699595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 3323337 - 3323259
Alignment:
Q  46 taaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaacta 124  Q
    |||||| ||||||||||||||||||||| |||| |||||||||||||  |||||||||| |||||| ||||||| ||||    
T  3323337 taaatgttactaattttaccattgaaatcaacacaattaatcatttttataataatcgtgcacaaaccttaaacgacta 3323259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 18853281 - 18853157
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaatt--ttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatct 114  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||  ||| ||||||||| |||| ||||||| |||| |||||  ||||| ||||||| |    
T  18853281 actaactacaactaataagagtattttggtaaatgatac-aattaattatcattgaaatcaacacaattaattatttccttaaagatcgtgcacaaattt 18853183  T
Q  115 taaacaactattttttagagacggat 140  Q
    ||||| |||||| ||| || ||||||    
T  18853182 taaacgactattattttgatacggat 18853157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 26608008 - 26607946
Alignment:
Q  57 aattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaac 119  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||| |||||| |||||||    
T  26608008 aattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaac 26607946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26608239 - 26608178
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaatttt 62  Q
    |||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||||    
T  26608239 tcaacttaactaatccactaactataattaataagagtattttagtaaatgatattaatttt 26608178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 39329754 - 39329648
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaatta--acataattaatcattttcttaataatcg 103  Q
    ||||||||| || |||||||||||||||||||| |||||||||||| || |||||||| ||||||||| |  ||| |||| ||||||||||||  |||||    
T  39329754 ttaactactcca-taactacaattaataagagtgttttagtaaatgctattaattttatcattgaaatcaatacacaattgatcattttcttagaaatcg 39329656  T
Q  104 tacacaaa 111  Q
    | ||||||    
T  39329655 tgcacaaa 39329648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 31976370 - 31976464
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| ||||||||| ||||| ||||||| ||||||||||||| ||  ||||||| |||||||| ||||  | ||||||||| ||||||||    
T  31976370 ttaactactccactaactataattattaagagtgttttagtaaatgaaacatattttactattgaaatcaacactactaatcatttccttaataa 31976464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 35242392 - 35242278
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||||  ||||||||||||||||||   |||| ||||||||||| ||||||||| |||| |||| |||| |||||| ||| | ||||| |||    
T  35242392 caacttaactactcaactaactacaattaataaatatattctagtaaatgattctaattttaacattaaaatcaacacaattaaacatctccttaaaaat 35242293  T
Q  102 cgtacacaaatctta 116  Q
     || || ||||||||    
T  35242292 tgtgcataaatctta 35242278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 32783404 - 32783480
Alignment:
Q  24 acaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||  || ||||||||||||||| ||||||||| ||  |||| |||| |||||||||||||||||||||    
T  32783404 acaattaataaaggtgttttagtaaatgatattaattttactatcaaaataaacacaattaatcattttcttaataa 32783480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 32831266 - 32831175
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaa 97  Q
    ||||||||| || ||||||||||||||||   | ||||||||||||||| |||||||||||||| |||||||  |  ||| |||||||||||    
T  32831266 ttaactactccaataactacaattaataaagatgttttagtaaatgatattaattttaccattgtaattaactaagctaaacattttcttaa 32831175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 34438081 - 34437998
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||| ||| ||||||||||| ||||||||||||||||||  |||||  |||| |||| ||||| |||||||||||| |||||||    
T  34438081 actatctataattaataagaatattttagtaaatgatacatattttgtcattaaaatcaacattattaatcatttttttaataa 34437998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 19426473 - 19426563
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattg-aaattaacataattaatcattt 91  Q
    |||||||||||||  ||| ||||||||||||||   |||||||||||||| | ||||||||| ||||| |||| |||| ||||||||||||    
T  19426473 caacttaactactcgacttactacaattaataatgatattttagtaaatgttgctaattttatcattgaaaatcaacacaattaatcattt 19426563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 28186231 - 28186348
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||||   ||||||| ||| ||||||  ||||||| ||||||||  ||||||||||||| | || ||||| |||||| |||||||||| ||    
T  28186231 tcaacttaactactctgctaactaaaatgaataaggatattttaataaatgattataattttaccattaatatcaacat-attaattattttcttaaaaa 28186329  T
Q  101 tcgtacacaaatcttaaac 119  Q
    || | |||||| |||||||    
T  28186330 tcatccacaaaacttaaac 28186348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 34451430 - 34451340
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcatttt 92  Q
    ||||| ||||| |||| |||||| ||||||| | | ||||||||||||| |||||||||||  ||| ||||| |||||||||||| |||||    
T  34451430 caactaaactatttcaataactagaattaatgaaaatattttagtaaataatactaattttctcatcgaaatcaacataattaataatttt 34451340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 27866527 - 27866611
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    |||||||||||||||||  ||||||| |||| |||| |||||||| |||| |||| ||||| ||||||||||| ||||| ||||||    
T  27866527 taactacaattaataaggatattttactaaa-gatattaattttatcattaaaatcaacattattaatcatttccttaaaaatcgt 27866611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 38763571 - 38763664
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| || ||||| |||||||| |||||||||||||||||| ||  ||||||||||| |||| ||||  | ||| ||||| ||||||||    
T  38763571 taactacttgacaaactataattaatatgagtattttagtaaatgaaacacattttaccattaaaatcaacactactaaccatttccttaataa 38763664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19937402 - 19937442
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtatt 41  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  19937402 tcaacttaactactccactaactacaattaataagagtatt 19937442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 28170637 - 28170569
Alignment:
Q  43 tagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaa 111  Q
    |||||||||  |||||||||||| ||||||| |||||||||||||||||| | |||| |||| ||||||    
T  28170637 tagtaaatgcaactaattttacccttgaaatcaacataattaatcattttttaaatactcgtgcacaaa 28170569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 39443789 - 39443853
Alignment:
Q  60 tttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaacta 124  Q
    ||||| |||||||| |||| |||||||||||||||||||||| || |||||| ||||||| ||||    
T  39443789 tttactattgaaatcaacaaaattaatcattttcttaataattgtgcacaaaccttaaacgacta 39443853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 10005197 - 10005079
Alignment:
Q  24 acaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaact 123  Q
    |||||||||||   ||||||||||||||||||||||||||    |||||| |||| |||| ||||||||||| ||||  || |||||| ||||||| |||    
T  10005197 acaattaataaagatattttagtaaatgatactaattttattgctgaaatcaacacaattgatcattttctt-ataaatgtgcacaaaccttaaacgact 10005099  T
Q  124 attttttagagacggatgaa 143  Q
     || ||| ||||| ||||||    
T  10005098 gttattttgagacagatgaa 10005079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 43730635 - 43730720
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattt 91  Q
    |||||||||||  | ||||||||||||||||| || ||||||||||||||| ||||||||||||| |||| |||| |  |||||||||    
T  43730635 acttaactactctagtaactacaattaataag-gt-ttttagtaaatgatattaattttaccattaaaatcaacacacctaatcattt 43730720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 11742622 - 11742482
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||| || ||||||||||||||||| || ||||| ||||| ||| | | ||||||||  |||| || | ||||||  | |||||||||||||    
T  11742622 aacttaactactccattaactacaattaataagggtgttttaataaataatattga-tttaccatcaaaatcaatacaattaaaaaatttcttaataatc 11742524  T
Q  103 gtacacaaatcttaaacaac---tattttttagagacggatg 141  Q
    || || |||  |||||| ||   |||| ||||||||||||||    
T  11742523 gtgcataaacgttaaacgactaatattatttagagacggatg 11742482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 12520891 - 12520832
Alignment:
Q  56 taattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctt 115  Q
    ||||||||||||| |||| |||| ||||||| ||||| || |||||||| ||||||||||    
T  12520891 taattttaccattaaaatcaacacaattaattattttattgataatcgtgcacaaatctt 12520832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 38187963 - 38187912
Alignment:
Q  17 actaactacaattaataagagtattttagtaaatgatactaattttaccatt 68  Q
    ||||||||||||||||| | || ||||||||||| | |||||||||||||||    
T  38187963 actaactacaattaataggggtgttttagtaaattaaactaattttaccatt 38187912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 2053283 - 2053337
Alignment:
Q  9 actacttcactaactacaattaataagagtattttagtaaatgatactaatttta 63  Q
    |||||| |||| |||| |||||||| | |||||||||| ||||||||||||||||    
T  2053283 actactccactgactataattaatatgcgtattttagtgaatgatactaatttta 2053337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 7438925 - 7438879
Alignment:
Q  78 ataattaatcattttcttaataatcgtacacaaatcttaaacaacta 124  Q
    |||||||||||||| |||||||||||| | |||| ||||||||||||    
T  7438925 ataattaatcatttccttaataatcgtgctcaaaccttaaacaacta 7438879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 26863451 - 26863405
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaat 50  Q
    ||||||||||| ||||||||||||||||||| ||| ||||| |||||    
T  26863451 acttaactactccactaactacaattaataaaagtgttttaataaat 26863405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 3601415 - 3601464
Alignment:
Q  15 tcactaactacaattaataagagtattttagtaaatgatactaattttac 64  Q
    ||||||||||||||||||||| || ||||||||||||  |||| ||||||    
T  3601415 tcactaactacaattaataagggtgttttagtaaatgcaactatttttac 3601464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 36173408 - 36173351
Alignment:
Q  31 ataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatca 88  Q
    |||||||||||||| ||||||||| |||||||| || | |||| |||| |||||||||    
T  36173408 ataagagtattttaataaatgatattaattttatcactaaaatcaacaaaattaatca 36173351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 38449200 - 38449159
Alignment:
Q  14 ttcactaactacaattaataagagtattttagtaaatgatac 55  Q
    ||||||||| | ||||||||||||| ||||||||||||||||    
T  38449200 ttcactaaccataattaataagagtgttttagtaaatgatac 38449159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 3323367 - 3323335
Alignment:
Q  2 caacttaactacttcactaactacaattaataa 34  Q
    ||||||||||||| |||||||||||||||||||    
T  3323367 caacttaactactccactaactacaattaataa 3323335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 4411067 - 4410988
Alignment:
Q  24 acaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    |||||||||||| |  |||||| |||||||| | ||||| ||||| |||| ||||| |||||||||| | |||||||||||    
T  4411067 acaattaataagtgcgttttagcaaatgatattcattttgccattaaaatcaacattattaatcattat-ttaataatcgt 4410988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 18202123 - 18202159
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagt 38  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  18202123 caacttaactacttcactaactacatttaacaagagt 18202159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 105701 - 105819
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||| | || |||||||||||||||||| |||| |||||||||||| ||||||||    
T  105701 tcaacttaactacttcactaactacaattaataagggtgttttagtaaacgctattaattttaccattgaaataaacacaattaatcatttacttaataa 105800  T
Q  101 tcgtacacaaatcttaaac 119  Q
    || | || |||||||||||    
T  105801 tcatgcataaatcttaaac 105819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 1722 - 1855
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| |||| ||||||||||||| | || ||| ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||     
T  1722 caacttaactactccactgactacaattaatacgggtgtttaagtaaatgatactaattttaccatcaaaatcaacataattaatcattttcttaataac 1821  T
Q  102 cgtacacaaatcttaaacaactattttttagaga 135  Q
    |||  | ||||||||||| |||||| ||||||||    
T  1822 cgtgtataaatcttaaacgactattatttagaga 1855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 136133 - 136012
Alignment:
Q  3 aacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatc 102  Q
    |||||||||||||||||||||| |||||||||| || |||||||||||| || |||||||||||||||||| ||||| |||||||||||  |||||||||    
T  136133 aacttaactacttcactaactataattaataagggtgttttagtaaatgctattaattttaccattgaaatcaacattattaatcatttatttaataatc 136034  T
Q  103 gtacacaaatcttaaacaacta 124  Q
    || || ||||||||||| ||||    
T  136033 gtgcataaatcttaaacgacta 136012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 50221 - 50367
Alignment:
Q  1 tcaacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    ||||||||| |||| ||||||||  |||||||||   |||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  50221 tcaacttaattactccactaactgtaattaataaagatattatagtaaatgatactaattttatcattgaaattaacacaattaatcatttccttaataa 50320  T
Q  101 tcgtacacaaatcttaaacaactattttttagagacggatgaagtat 147  Q
    |||| |||||| ||||||| |||| | ||  |||||||||| |||||    
T  50321 tcgtgcacaaaccttaaacgactaatattgtgagacggatggagtat 50367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 22370 - 22438
Alignment:
Q  6 ttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaatt 74  Q
    ||||||||| ||||||| || ||||||||   |||||||||||||||||||||||||| |||| |||||    
T  22370 ttaactactgcactaaccacgattaataaagatattttagtaaatgatactaattttagcattaaaatt 22438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 5408 - 5525
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||| | |||| | ||||||||||||||||||||    
T  5408 caacttaactactccactaactaaaattaataaggatattttagtaaatgatattaattttaccattgaattcaacacagttaatcattttcttaataat 5507  T
Q  102 cgtacacaaatcttaaac 119  Q
    | |  ||||| |||||||    
T  5508 catgtacaaaccttaaac 5525  T

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Target: scaffold0182 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 20450 - 20317
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||  |||| |||| ||||||||||||  ||||||||    
T  20450 caacttaactacttcactaactgcaattaataagggtattttactaaatgatactaattttacaatcaaaatcaacacaattaatcatttaattaataat 20351  T
Q  102 cgtacacaaatcttaaacaactattttttagaga 135  Q
    | | |||||  ||||||  |||||| ||||||||    
T  20350 cttgcacaacccttaaagtactattatttagaga 20317  T

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Target: scaffold0159 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 34116 - 34000
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    ||||||||||| |||||||||||||||||||||| || ||||||||||||  ||||||||||| |||||| | || | |||||||||||| |||||||||    
T  34116 caacttaactatttcactaactacaattaataagggtgttttagtaaatgccactaattttactattgaattcaatacaattaatcatttccttaataat 34017  T
Q  102 cgtacacaaatcttaaa 118  Q
    ||| |||||| ||||||    
T  34016 cgtgcacaaaccttaaa 34000  T

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Target: scaffold0583 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 2057 - 2180
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatctt 115  Q
    ||||||||||||||||||||  | ||||||||||||||| |||||||| |||||||||||||| ||||||||| || |||||||||||| ||  || |||    
T  2057 cactaactacaattaataaggatgttttagtaaatgatattaattttatcattgaaattaacacaattaatcacttccttaataatcgtgcatgaacctt 2156  T
Q  116 aaacaactattttttagagacgga 139  Q
    |||| ||| || ||||||||||||    
T  2157 aaacgacttttatttagagacgga 2180  T

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Target: scaffold0302 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 16119 - 16238
Alignment:
Q  5 cttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    ||||||| ||||| ||||||||||||||||| || |||||||||||| || |||||||| |||| |||| |||| |||||||||||| ||||||||||||    
T  16119 cttaactgcttcattaactacaattaataagtgtgttttagtaaatgctattaattttatcattaaaatcaacacaattaatcatttccttaataatcgt 16218  T
Q  105 acacaaatcttaaacaacta 124  Q
      ||||||||||||| ||||    
T  16219 gaacaaatcttaaactacta 16238  T

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Target: scaffold0328 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 8078 - 7941
Alignment:
Q  2 caacttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||||| |||| |||||||||||||||||||| || |||| |||||| ||| ||||||||||||  |||| |||| |||||||||||| ||||||||     
T  8078 caacttaattactccactaactacaattaataagggtgttttggtaaataatattaattttaccatccaaatcaacaaaattaatcatttccttaataac 7979  T
Q  102 cgtacacaaatcttaaacaactattttttagagacgga 139  Q
    ||| ||  || | ||||| |||||| ||||||||||||    
T  7978 cgtgcatcaaccgtaaacgactattatttagagacgga 7941  T

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Target: scaffold0294 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 17070 - 17175
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    |||||| |||||||||| || || || |||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||| | |||||| ||||||    
T  17070 taactataattaataagggtgttctaataaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataatcatgcacaaaccttaaa 17169  T
Q  119 caacta 124  Q
    | ||||    
T  17170 cgacta 17175  T

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Target: scaffold1391 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 1897 - 1777
Alignment:
Q  19 taactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaa 118  Q
    |||||| |||||||||  || ||||||||||||||| |||||| || ||  |||| |||| ||||||| ||||||||||||||||| || |||  |||||    
T  1897 taactataattaataaaggtgttttagtaaatgatattaatttgactatcaaaatcaacacaattaattattttcttaataatcgtgcataaactttaaa 1798  T
Q  119 caactattttttagagacgga 139  Q
     ||||||| |||||| |||||    
T  1797 gaactattatttagaaacgga 1777  T

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Target: scaffold0188 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 6792 - 6876
Alignment:
Q  39 attttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaact 123  Q
    |||||||||||| |||||||||||| |||||||||||| | |||||||||||| ||||| ||||   |||||| |||||||||||    
T  6792 attttagtaaataatactaattttatcattgaaattaaaacaattaatcatttccttaaaaatcacgcacaaaccttaaacaact 6876  T

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Target: scaffold0003 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 39127 - 39243
Alignment:
Q  23 tacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaac 122  Q
    ||||||||||||   | |||||||||||||||||||||| | |||  |||| |||| |||||||||||| ||||||||| || || ||| ||||||| |     
T  39127 tacaattaataatgatgttttagtaaatgatactaatttcatcatcaaaatcaacacaattaatcatttccttaataattgtgcaaaaaccttaaacgat 39226  T
Q  123 tattttttagagacgga 139  Q
    |||| ||||||||||||    
T  39227 tattatttagagacgga 39243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 252575 - 252491
Alignment:
Q  53 tactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaactattttttagagacg 137  Q
    |||||||||||||||| |||| |||||||||||||||||  ||||||||| ||| |||| ||||||| |||||  ||||||||||    
T  252575 tactaattttaccattaaaatcaacataattaatcatttctttaataatcatacgcaaaccttaaacgactataatttagagacg 252491  T

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Target: scaffold0470 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 1055 - 1105
Alignment:
Q  54 actaattttaccattgaaattaacataattaatcattttcttaataatcgt 104  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  1055 actaattttaccattgaaatcaacataattaatcatttttttaataatcgt 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 767 - 697
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaat 86  Q
    ||||||||||||| |||||  || |||||||||||| || |||||||||||||||||| |||| |||||||    
T  767 cactaactacaatcaataaaggtgttttagtaaatgctattaattttaccattgaaatcaacacaattaat 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 126194 - 126288
Alignment:
Q  7 taactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataat 101  Q
    |||||| ||||||||||| |||||| || ||| ||||||||||||||||  |||||  |||| |||| ||||  ||||||||||| |||||||||    
T  126194 taactatttcactaactataattaacaacagtcttttagtaaatgatacacattttgtcattaaaataaacactattaatcatttccttaataat 126288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 12041 - 12114
Alignment:
Q  27 attaataagagtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataa 100  Q
    |||||||||||| ||||||||||||||||  ||||| ||||| |||| ||||| | ||||||||| ||||||||    
T  12041 attaataagagtgttttagtaaatgatacacattttgccattaaaatcaacatcagtaatcatttccttaataa 12114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 6347 - 6260
Alignment:
Q  37 gtattttagtaaatgatactaattttaccattgaaattaacataattaatcattttcttaataatcgtacacaaatcttaaacaacta 124  Q
    ||||| |||| |||||||||||||||| ||||  ||| |||| ||||||||||||  |||| |||||| ||||||  |||||| ||||    
T  6347 gtattgtagtgaatgatactaattttatcattagaatcaacacaattaatcatttcgttaaaaatcgtgcacaaactttaaacgacta 6260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2146 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold2146
Description:

Target: scaffold2146; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 437 - 494
Alignment:
Q  16 cactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaat 73  Q
    |||||||||| ||||||||| || ||||| | |||||||||||||||| |||| ||||    
T  437 cactaactactattaataagggtgttttattgaatgatactaattttaacattaaaat 494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 42897 - 42969
Alignment:
Q  4 acttaactacttcactaactacaattaataagagtattttagtaaatgatactaattttaccattgaaattaa 76  Q
    |||||| || |||||||| || ||||||||||| | |||||| |||  ||| ||||||||| |||||||||||    
T  42897 acttaattatttcactaattataattaataagaatgttttagcaaaatatattaattttactattgaaattaa 42969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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