View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15126_low_62 (Length: 205)
Name: NF15126_low_62
Description: NF15126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15126_low_62 |
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Alignment Details
Target: chr5 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 9445205 - 9445033
Alignment:
| Q |
14 |
cagagatatgaaatccatttgtgtctattggatttatcaagtttagtccaatagtaagctacctcgctaacacggctttgcaaagccaaggccaagactt |
113 |
Q |
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| T |
9445205 |
cagaaatatgaaatccatttgtgtctattggatttatcaagtttagtccaatagtaagctacctcgctaacacggctttgcaaagccaaggccaagactt |
9445106 |
T |
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| Q |
114 |
tgcgtccctggtgccacaatgcatgagctactcgataaacttgcagagaatggaaaccctgttgccaaaacac |
186 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9445105 |
tgcgtccctggtgccacaatgcatgagctactcgataaacttgcagagaatggaaaccctgttgccaaaacac |
9445033 |
T |
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