View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1512_high_13 (Length: 216)
Name: NF1512_high_13
Description: NF1512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1512_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 6710378 - 6710193
Alignment:
| Q |
13 |
attatacttccaaaacaagaaaaatcaacataaatagcaataagcacccttgaaagagaagaagacaacaaaaacaaacctaaatgggaaaagtaatatt |
112 |
Q |
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| T |
6710378 |
attatacttccaaatcaagaaaaatcaacataaatagcaataagcacccttgaaagagaagaagacaacaaaaacaaacctaaatgggaaaagtaatatt |
6710279 |
T |
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| Q |
113 |
tatacaaggggaaaaattagaatagagagcgacatgaaccatccccttctcatgatctaaagactcacagccaacaacacaataaat |
199 |
Q |
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| T |
6710278 |
tatacaagggg-aaaattagaatagagagcgacatgaacgatccccttctcatgatccaaagactcacagccaacaacacaataaat |
6710193 |
T |
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