View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1512_low_1 (Length: 537)
Name: NF1512_low_1
Description: NF1512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1512_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 442; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 1 - 521
Target Start/End: Original strand, 35694372 - 35694880
Alignment:
| Q |
1 |
cgcaggtaactgcgaaattaccttccaagccagtactttcacctgcaattccagttccaacgaactcttaatctctcttcctcgtagcggaaatatcaaa |
100 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
35694372 |
cgcaggtaactgcgaaattaccgtccaagccagtactttcacctgcaattccagttccagcgaactcttaatctctcttcctcgtagcggaaatatcaaa |
35694471 |
T |
|
| Q |
101 |
gtatctggtaatatcttttgtttc-aattaccaacgcttctatttgtattcatttgattcaattcgttaattaacgatttttaccatgtttcaagatgtt |
199 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35694472 |
gtatctggtaatatcttttgtttccaattaccaacgcttctatttgtattcatttgattcaattcgttaattaacgatttttaccatgtttcaagatgtt |
35694571 |
T |
|
| Q |
200 |
tctgcaaaccatagaaacgcttctgagaatttcactcctgaagaaagaggtaaaaccctaattttactcgtcattcattcaaatattcattttaagtatt |
299 |
Q |
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| T |
35694572 |
tctgcaaaccataaaaacgcttctgagaatttcactcctgaagaaagaggtaaatccctaattttacgcgtcattcattcaaatattcatcttaagtatt |
35694671 |
T |
|
| Q |
300 |
tatctgtgtgattataatgcttgctcttgggttgatatattcgtagaacatgagttcatgctggttaatcctaaagatgttgatgatattaccaaatcat |
399 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35694672 |
tatctgtgtgattataatgcttgctcttgggttgatatattcgtagaacatgagttcatgctggttaatcctaaagatgttgatgatattaccaaatcat |
35694771 |
T |
|
| Q |
400 |
accttcaggtagtgtaacacgggcgtctctccgttgttattcatgtttattcattttacagttatataaatgtagaaattttaattttgtaatgctttga |
499 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
35694772 |
accttcaggtagtgtaacatgggcgtctctccgttgttattcatgttta-------------tatataaatgtagaaattttaattttgtaatgctttga |
35694858 |
T |
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| Q |
500 |
atgtaaattgttgggtttacag |
521 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
35694859 |
atgtaaattgttgggtttacag |
35694880 |
T |
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