View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15131_high_8 (Length: 351)

Name: NF15131_high_8
Description: NF15131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15131_high_8
NF15131_high_8
[»] chr6 (30 HSPs)
chr6 (13-329)||(4601530-4601850)
chr6 (15-79)||(4505852-4505916)
chr6 (15-79)||(4480688-4480752)
chr6 (14-76)||(4617020-4617082)
chr6 (15-79)||(3171736-3171800)
chr6 (14-78)||(4299812-4299876)
chr6 (15-79)||(4492950-4493014)
chr6 (18-74)||(4560506-4560562)
chr6 (15-71)||(4267239-4267295)
chr6 (15-79)||(4504470-4504534)
chr6 (18-74)||(4563711-4563767)
chr6 (15-74)||(4557125-4557184)
chr6 (15-74)||(4570972-4571031)
chr6 (23-77)||(4515202-4515256)
chr6 (14-79)||(4516316-4516381)
chr6 (23-79)||(4461118-4461174)
chr6 (18-74)||(4574308-4574364)
chr6 (14-74)||(4606963-4607023)
chr6 (15-71)||(4622145-4622201)
chr6 (15-76)||(4392099-4392160)
chr6 (21-74)||(4579432-4579485)
chr6 (131-216)||(4616929-4617014)
chr6 (18-74)||(4585636-4585692)
chr6 (18-74)||(4592231-4592287)
chr6 (18-70)||(4598175-4598227)
chr6 (217-313)||(4616379-4616477)
chr6 (30-71)||(4256700-4256741)
chr6 (15-68)||(4490428-4490481)
chr6 (18-74)||(4613794-4613850)
chr6 (15-79)||(4625946-4626010)
[»] chr5 (3 HSPs)
chr5 (130-333)||(28000449-28000653)
chr5 (14-81)||(28000171-28000238)
chr5 (15-71)||(24103002-24103058)
[»] chr8 (3 HSPs)
chr8 (14-80)||(1674220-1674286)
chr8 (22-74)||(20863923-20863975)
chr8 (15-74)||(16686340-16686399)
[»] scaffold0288 (1 HSPs)
scaffold0288 (14-71)||(3791-3848)
[»] chr3 (1 HSPs)
chr3 (15-108)||(1281082-1281173)
[»] chr7 (1 HSPs)
chr7 (15-68)||(3086426-3086479)
[»] scaffold0477 (1 HSPs)
scaffold0477 (15-71)||(4759-4815)


Alignment Details
Target: chr6 (Bit Score: 284; Significance: 1e-159; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 13 - 329
Target Start/End: Complemental strand, 4601850 - 4601530
Alignment:
Q  13 taggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaattagatatataatgatattattttatacaatgcagtatt 112  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4601850 taggtggttgttcatacaagaacctggacaaagttattaaggaggtgttgcttaaacaaaattagatatataatgatattgttttatacaatgcagtatt 4601751  T
Q  113 ctactactttatcgacctggaggttgtttctaa----attattaagctattactatgctttgatgcaatgtattttttactatgtactattccaatattc 208  Q
    ||| |||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4601750 ctattactttatcgacctggaggttgtttctaattaaattattaagctattactatgctttgatgcaatgtattttttactatgtactattccaatattg 4601651  T
Q  209 aatttgggattaatattatgtgaagcttcaaatatttttcctagggatgattagaaagaaactttattaattgaagtttggaataagtttcctttcacag 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4601650 aatttgggattaatattatgtgaagcttcaaatatttttcctagggctgattagaaagaaactttattaattgaagtttggaataagtttcctttcacag 4601551  T
Q  309 ttactatagcttaaccaactc 329  Q
    |||||||||||||||||||||    
T  4601550 ttactatagcttaaccaactc 4601530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 4505916 - 4505852
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaattagat 79  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4505916 ggtggttgttcattcatgaacttggacaaagttattaaggaggtgttgcttaaacaaaattagat 4505852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 4480752 - 4480688
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaattagat 79  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||    
T  4480752 ggtggttgttcatacatgaacttggacaaagtgattaaggaggtcttgcttaaacaaaattagat 4480688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 4617082 - 4617020
Alignment:
Q  14 aggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaatta 76  Q
    |||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||    
T  4617082 aggtggttgttcatacatgaacttgaacaaagttattaaggatgtgttgcttaaacaaaatta 4617020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 3171800 - 3171736
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaattagat 79  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||| |||||||||||| |||||||    
T  3171800 ggtggttgttcatacatgaacttggataaagtgattaaggaggtcttgcttaaacaatattagat 3171736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 4299812 - 4299876
Alignment:
Q  14 aggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaattaga 78  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||  ||||||||||| ||||||    
T  4299812 aggtggttgttcgtacatgaacttggacaaagttattaaggaggttctgcttaaacaatattaga 4299876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 4493014 - 4492950
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaattagat 79  Q
    ||||||||||||||||||||| |||||||||| || ||||| || ||||||||||||||||||||    
T  4493014 ggtggttgttcatacatgaacttggacaaagtgatcaaggatgtcttgcttaaacaaaattagat 4492950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 4560562 - 4560506
Alignment:
Q  18 ggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaat 74  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||    
T  4560562 ggttgttcatacatgaacttggagaaagtgattaaggaggtgttgcttaaacaaaat 4560506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 4267239 - 4267295
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaa 71  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  4267239 ggtggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaaacaa 4267295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 4504470 - 4504534
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaattagat 79  Q
    ||||||||||||||||||||| |||||||||| |||||||| || ||||||||| || |||||||    
T  4504470 ggtggttgttcatacatgaacttggacaaagtgattaaggacgtcttgcttaaaaaatattagat 4504534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 4563767 - 4563711
Alignment:
Q  18 ggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaat 74  Q
    |||||||||||||||||| |||||||||| || |||||||| |||||||||||||||    
T  4563767 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 4563711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 4557184 - 4557125
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaat 74  Q
    ||||||||||||||||||||  |||| ||||| ||||||||||| |||||||||||||||    
T  4557184 ggtggttgttcatacatgaatttggaaaaagtgattaaggaggttttgcttaaacaaaat 4557125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 4571031 - 4570972
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaat 74  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||| ||||||||| |||||    
T  4571031 ggtggttgttcatacatgaacttggaaaaagtgattaaggaggttttgcttaaataaaat 4570972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 4515202 - 4515256
Alignment:
Q  23 ttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaattag 77  Q
    ||||||| ||||| |||||||||| || |||||||||||||||||||||||||||    
T  4515202 ttcatacttgaacttggacaaagtgatcaaggaggtgttgcttaaacaaaattag 4515256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 4516381 - 4516316
Alignment:
Q  14 aggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaattagat 79  Q
    |||||||||||||||  ||||| |||| ||||| |||||||||||| |||| ||||||||||||||    
T  4516381 aggtggttgttcatatgtgaacttggaaaaagtgattaaggaggtgctgctcaaacaaaattagat 4516316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 4461174 - 4461118
Alignment:
Q  23 ttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaattagat 79  Q
    |||||||| |||| |||||||||| |||||||| || ||||||||||||||||||||    
T  4461174 ttcatacaagaacttggacaaagtcattaaggatgtcttgcttaaacaaaattagat 4461118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 4574364 - 4574308
Alignment:
Q  18 ggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaat 74  Q
    |||||||||||||  ||| |||| ||||| |||||||||||||||||||||||||||    
T  4574364 ggttgttcatacacaaacttggagaaagtgattaaggaggtgttgcttaaacaaaat 4574308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 4606963 - 4607023
Alignment:
Q  14 aggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaat 74  Q
    |||||||| ||||||||||||| |||| ||||| |||||| |||| |||||||||||||||    
T  4606963 aggtggtttttcatacatgaacttggaaaaagtgattaagaaggttttgcttaaacaaaat 4607023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 4622201 - 4622145
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaa 71  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||  |||||||||||    
T  4622201 ggtggttgttcatacaacaacttggacaaagttattaaggaggtcatgcttaaacaa 4622145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 4392099 - 4392160
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaatta 76  Q
    ||||||| ||||| ||||||| |||||||| | ||||||||||| ||||||||||| |||||    
T  4392099 ggtggttcttcattcatgaacttggacaaactgattaaggaggtcttgcttaaacataatta 4392160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 4579485 - 4579432
Alignment:
Q  21 tgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaat 74  Q
    ||||||||||||||| |||| ||||| |||||||||||||| || |||||||||    
T  4579485 tgttcatacatgaacttggagaaagtgattaaggaggtgttactcaaacaaaat 4579432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 4617014 - 4616929
Alignment:
Q  131 ggaggttgtttctaaattattaagctattactatgctttgatgcaatgtattttttactatgtactattccaatattcaatttggg 216  Q
    |||||| || || ||||| ||| || ||||||||||||||||| | ||||||||| |||||||| | || ||||||| ||||||||    
T  4617014 ggaggtcgtatcgaaatttttaggccattactatgctttgatgtactgtatttttaactatgtattgtttcaatatttaatttggg 4616929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 4585692 - 4585636
Alignment:
Q  18 ggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaat 74  Q
    |||||||||||||| ||| |||| ||||| ||||||||||| ||||||||| |||||    
T  4585692 ggttgttcatacataaacttggaaaaagtgattaaggaggttttgcttaaataaaat 4585636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 4592287 - 4592231
Alignment:
Q  18 ggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaat 74  Q
    ||||||||||| |||||| |||||||| | || |||||||||||||||||| |||||    
T  4592287 ggttgttcatatatgaacttggacaaattgatcaaggaggtgttgcttaaataaaat 4592231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 4598227 - 4598175
Alignment:
Q  18 ggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaaca 70  Q
    |||||||||||||||||| | || ||||| |||||||||||||| ||||||||    
T  4598227 ggttgttcatacatgaacttagagaaagtgattaaggaggtgtttcttaaaca 4598175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 4616477 - 4616379
Alignment:
Q  217 attaatattatgtgaagcttcaaatatttttccta-gggatgattagaaagaaactttat-taattgaagtttggaataagtttcctttcacagttact 313  Q
    ||||| ||||||||||||||||||||||||| |||  |  ||||||| | ||||||| || |||||||||||||||| |||  ||||| |||| |||||    
T  4616477 attaacattatgtgaagcttcaaatattttttctacagcctgattaggatgaaacttcatataattgaagtttggaacaaggctccttccacaattact 4616379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 4256700 - 4256741
Alignment:
Q  30 atgaacctggacaaagttattaaggaggtgttgcttaaacaa 71  Q
    |||||| ||||||||||||||||||||||  |||||||||||    
T  4256700 atgaacttggacaaagttattaaggaggtcatgcttaaacaa 4256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 4490428 - 4490481
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaa 68  Q
    |||||| |||||||||||||| |||||||||| |||||||| ||  ||||||||    
T  4490428 ggtggtagttcatacatgaacttggacaaagtgattaaggatgtcatgcttaaa 4490481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 4613794 - 4613850
Alignment:
Q  18 ggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaat 74  Q
    ||||||||||| |||||| |||||||||| || || |||||| |||| |||||||||    
T  4613794 ggttgttcatatatgaacttggacaaagtgatcaatgaggtgctgctgaaacaaaat 4613850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 4626010 - 4625946
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaattagat 79  Q
    ||||||||||||||||||||  |||| ||| | ||||| || || |||||||||||| |||||||    
T  4626010 ggtggttgttcatacatgaatatggataaactgattaatgatgtcttgcttaaacaatattagat 4625946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 130 - 333
Target Start/End: Original strand, 28000449 - 28000653
Alignment:
Q  130 tggaggttgtttctaaattattaagctattactatgctttgatgcaatgtattttttactatgtactattccaatattcaatttgggattaatattatgt 229  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||   ||| || ||||  |||||| |  || ||||||||||||||||| |||| ||    
T  28000449 tggaggttgtttctaaatttttaagctattactacgctttgatgcaccatatattgtact--gtactacttaaaaattcaatttgggattaacattacgt 28000546  T
Q  230 gaagcttcaaatatttttcct-aggga-tgattagaaagaaactttat-taattgaagtttggaataagtttcctttcacagttactatagcttaaccaa 326  Q
    |||| |||||||||||||||  ||||  |||  || |||||| ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  28000547 gaagtttcaaatatttttccagagggtctgaccagcaagaaaatttatataattgaagtttggaataaggttcctttcatagttactatagcttaaccaa 28000646  T
Q  327 ctcatta 333  Q
    | |||||    
T  28000647 cacatta 28000653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 28000171 - 28000238
Alignment:
Q  14 aggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaattagatat 81  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||| ||||||||||||||||||    
T  28000171 aggtggttgttcatacatgaacttggacaaagtgattaaggaagtgttgtttaaacaaaattagatat 28000238  T

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Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 24103058 - 24103002
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaa 71  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  24103058 ggtggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaaacaa 24103002  T

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Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 1674286 - 1674220
Alignment:
Q  14 aggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaattagata 80  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  1674286 aggtggttgttcatacatgaacttggacaaagtgattaaggaagtgttgcttaaacaaaattagata 1674220  T

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Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 20863923 - 20863975
Alignment:
Q  22 gttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaat 74  Q
    ||||||| |||||| |||||||||| |||||||||||||||||||||||||||    
T  20863923 gttcatatatgaacttggacaaagtgattaaggaggtgttgcttaaacaaaat 20863975  T

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Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 16686340 - 16686399
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaat 74  Q
    ||||||||||||||||||||| |||| ||||| |||| |||||| |||||||||||||||    
T  16686340 ggtggttgttcatacatgaacttggaaaaagtgattatggaggttttgcttaaacaaaat 16686399  T

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Target: scaffold0288 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 3791 - 3848
Alignment:
Q  14 aggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaa 71  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3791 aggtggtcgttcatacatgaacctggacaaagttattaaggaggttttgcttaaacaa 3848  T

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Target: chr3 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 108
Target Start/End: Complemental strand, 1281173 - 1281082
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaaaattagatatataatgatattattttatacaatgcag 108  Q
    ||||||||||||||||||||| | |||||||| ||||||||  ||||||||||||||||||||  ||| ||||||||| |||| | ||||||||    
T  1281173 ggtggttgttcatacatgaacttcgacaaagtgattaaggaaatgttgcttaaacaaaattag--atagaatgatattgttttctgcaatgcag 1281082  T

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Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 3086479 - 3086426
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaa 68  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  3086479 ggtggttgttcatacatgaacttggacaaagttattaaggaggtcttgcttaaa 3086426  T

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Target: scaffold0477 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 4759 - 4815
Alignment:
Q  15 ggtggttgttcatacatgaacctggacaaagttattaaggaggtgttgcttaaacaa 71  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||  |||||||||||    
T  4759 ggtggctgttcatacatgaacttggacaaagtgattaaggaggtcatgcttaaacaa 4815  T

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