View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15131_low_8 (Length: 381)
Name: NF15131_low_8
Description: NF15131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15131_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 19 - 367
Target Start/End: Original strand, 980696 - 981046
Alignment:
| Q |
19 |
tgtttgtgtaaacaataacgaatatgtttttaatttacaaagtgtaagtcaaatatatacaatatgtaatatcaaacttcagaggtacctacaattgggt |
118 |
Q |
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| T |
980696 |
tgtttgtgaaaacaacaactaatatgtttttaatttacaatgtgtaagttaaatatatacaatatgtaatatcaaacttcagaggtacctacaactgggt |
980795 |
T |
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| Q |
119 |
aaaaaag--ctatacaaacttacaaccatgttttctgcatatttagttgaataggttctgtctttccttaaccaagttgtcactataacctcagctcgac |
216 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||| |
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| T |
980796 |
aaaaaaaatctatacaaacttacaaccatgttttctgcatatttagttgaataggttccgtctttcttcaaccaagttgtcactataacctcagctcgac |
980895 |
T |
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| Q |
217 |
aaatgggtcttctcaaatctgtctcctatcacattatgttaaagcaaagaaaaagttatagtatggtaggtaacctgaaactaaatttgcaaaaatacaa |
316 |
Q |
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|||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | |
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| T |
980896 |
aaatgggtcttctcaattctgtctcctatcatattatgttaaagcaaagaaaaagttagagtatgataggtaacctgaaactaaatttgcaaaaatacta |
980995 |
T |
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| Q |
317 |
ccaaaatatgattct-cacattagaacaaaccatttcgtacgccctcctttg |
367 |
Q |
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||||||||||||| | |||||| |||| |||||||||||| ||||||||||| |
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| T |
980996 |
ccaaaatatgattttacacattggaac-aaccatttcgtatgccctcctttg |
981046 |
T |
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