View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15133_high_25 (Length: 239)
Name: NF15133_high_25
Description: NF15133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15133_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 28669013 - 28669221
Alignment:
| Q |
15 |
aagaagtgtaagataaaaacatgcacagtttgagtttcacatacacaatttcaaaaaacaaactttgaactg--nnnnnnnctctctctctagaaatgct |
112 |
Q |
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| T |
28669013 |
aagaagtgtaagataaaaacatgcacagtttgagtttcacatacacaatttcaaaaaacaaactttgaactgtttttttctctctctctctagaaatgct |
28669112 |
T |
|
| Q |
113 |
aagataatgaatgtgtcagggttgttgtctcacaaagattctctctgtnnnnnnntgtgttatttttctctgtcaacaacggcaaagacacgtttgatga |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28669113 |
aagataatgaatgtgtcagggttgttgtctcacaaagattctctctgtaaaaaaatgtgttatttttctctgtcaacaacggcaaagacacgtttgatga |
28669212 |
T |
|
| Q |
213 |
taatctaac |
221 |
Q |
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||||||||| |
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| T |
28669213 |
taatctaac |
28669221 |
T |
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