View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15133_low_9 (Length: 475)

Name: NF15133_low_9
Description: NF15133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15133_low_9
NF15133_low_9
[»] chr4 (33 HSPs)
chr4 (1-457)||(6623229-6623682)
chr4 (272-457)||(6675035-6675220)
chr4 (272-457)||(6499094-6499279)
chr4 (272-457)||(6650097-6650282)
chr4 (268-457)||(6546699-6546888)
chr4 (269-454)||(6757423-6757608)
chr4 (268-455)||(6588740-6588921)
chr4 (270-457)||(6714818-6714999)
chr4 (271-457)||(6533484-6533670)
chr4 (268-457)||(6726893-6727076)
chr4 (272-457)||(6772180-6772359)
chr4 (268-457)||(6814632-6814815)
chr4 (268-457)||(6835234-6835423)
chr4 (269-456)||(6795363-6795544)
chr4 (338-421)||(4334669-4334752)
chr4 (1-74)||(6674719-6674792)
chr4 (9-98)||(6771928-6772017)
chr4 (269-457)||(6751864-6752052)
chr4 (343-422)||(4125235-4125314)
chr4 (2-72)||(6547085-6547155)
chr4 (338-422)||(4352406-4352490)
chr4 (338-422)||(4344127-4344211)
chr4 (1-97)||(6726647-6726743)
chr4 (339-458)||(4359584-4359703)
chr4 (1-72)||(6534834-6534905)
chr4 (110-181)||(6751693-6751764)
chr4 (338-422)||(4134621-4134705)
chr4 (346-415)||(4321836-4321905)
chr4 (115-188)||(6757252-6757325)
chr4 (1-98)||(6795158-6795255)
chr4 (111-148)||(6714643-6714680)
chr4 (1-38)||(6814488-6814525)
chr4 (133-181)||(6674855-6674903)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-457)||(5420-5873)
[»] scaffold0813 (1 HSPs)
scaffold0813 (370-457)||(5691-5778)
[»] chr6 (13 HSPs)
chr6 (342-421)||(5424753-5424832)
chr6 (342-458)||(5342765-5342881)
chr6 (342-422)||(5349377-5349457)
chr6 (342-421)||(5067996-5068075)
chr6 (342-421)||(5095169-5095248)
chr6 (342-421)||(5369485-5369564)
chr6 (338-383)||(5396187-5396232)
chr6 (345-457)||(5432545-5432657)
chr6 (342-415)||(5158352-5158425)
chr6 (342-458)||(5147701-5147817)
chr6 (342-458)||(5175996-5176112)
chr6 (342-458)||(5277823-5277939)
chr6 (346-430)||(5382750-5382834)
[»] chr5 (1 HSPs)
chr5 (342-388)||(8876991-8877037)
[»] scaffold0373 (1 HSPs)
scaffold0373 (1-98)||(11046-11143)
[»] chr7 (2 HSPs)
chr7 (342-383)||(36214710-36214751)
chr7 (342-458)||(18934463-18934579)


Alignment Details
Target: chr4 (Bit Score: 362; Significance: 0; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 1 - 457
Target Start/End: Complemental strand, 6623682 - 6623229
Alignment:
Q  1 tgagaaccgcagtaggttgtggcgccgtgaggaagtgtatgatgtattattaaagcagaaggtaattactaactacagcacttcttgtatggtttataca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6623682 tgagaaccgcagtaggttgtggcgccgtgaggaagtgtatgatgtattattaaagcagaaggtaattactaactatagcacttcttgtatggtttataca 6623583  T
Q  101 acagtgaaggaggaagagaactaaacattgaggaatcaattattaacaatcatttggattcttaattatcaaatgaaatgtcaaaattgttataaactag 200  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6623582 acagtgaagga---agagaactaaacattgaggaatcaattattaacaatcatttggattcttaattatcaaatgaaatgtcaaaattgttataaactag 6623486  T
Q  201 tacactacaaaatgtttagctggtggatatctaagctatacannnnnnnnnnnnnnnnnnnnnnnccaatttcagggaacagaagctgtcaagggactgg 300  Q
    ||||||||||||||||||||| |||||||||||||||||||                        |||||||||||||||||||||||||||||||||||    
T  6623485 tacactacaaaatgtttagctagtggatatctaagctatacgttttctgtttttgtttttgttttccaatttcagggaacagaagctgtcaagggactgg 6623386  T
Q  301 ctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaa 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6623385 ctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaa 6623286  T
Q  401 tggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 457  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6623285 tggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 6623229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 272 - 457
Target Start/End: Original strand, 6675035 - 6675220
Alignment:
Q  272 tcagggaacagaagctgtcaagggactggctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaactcaga 371  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||     
T  6675035 tcagggaacagaagctgtcaagggtctggctttggagtttccaagaaataataaagtttgtctgaataccaaagcatctaagaagatgaataaactcagg 6675134  T
Q  372 ttgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 457  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6675135 ttgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctgtactggcatggatttcc 6675220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 272 - 457
Target Start/End: Complemental strand, 6499279 - 6499094
Alignment:
Q  272 tcagggaacagaagctgtcaagggactggctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaactcaga 371  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  6499279 tcagggaacagaagctgtcaagggactggctttggagtttccaaggaagaatacagtttctctgaataccaaagcatttaagaagatgaataaactcaga 6499180  T
Q  372 ttgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 457  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| |||||||    
T  6499179 ttgcttcaactttccggggttcagcttaatggagattttaaatacctttccggagaacttaggtggctgtcctggcatagatttcc 6499094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 272 - 457
Target Start/End: Original strand, 6650097 - 6650282
Alignment:
Q  272 tcagggaacagaagctgtcaagggactggctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaactcaga 371  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| || |||| ||||| ||| |||||||||||||| |||||||||||||||||||||    
T  6650097 tcagggaacagaagctgtcaagggactggcattggagtttccaaggaagaatacagtttctcttaataccaaagcattcaagaagatgaataaactcaga 6650196  T
Q  372 ttgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 457  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  6650197 ttgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctgtactggcacggatttcc 6650282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 268 - 457
Target Start/End: Complemental strand, 6546888 - 6546699
Alignment:
Q  268 aatttcagggaacagaagctgtcaagggactggctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaact 367  Q
    |||||||||||||| | |||||||||||||||| |||||  ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6546888 aatttcagggaacaaatgctgtcaagggactggttttggaatttcctataaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaact 6546789  T
Q  368 cagattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 457  Q
    ||||||||||| ||||   |||||  |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  6546788 cagattgcttcgacttggtggggtgaagcttaatggagattttaaatacctttcagaagaacttaggtggctttgctggcatggatttcc 6546699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 269 - 454
Target Start/End: Original strand, 6757423 - 6757608
Alignment:
Q  269 atttcagggaacagaagctgtcaagggactggctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaactc 368  Q
    |||||||||||||||||| ||||||||||||| ||||| ||||||   |||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  6757423 atttcagggaacagaagccgtcaagggactggttttggagtttccccaaaaagatagagtttgtctgaaaaccaaagcatttaagaagatgaataaactc 6757522  T
Q  369 agattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggatt 454  Q
    |||||||| ||||||   ||||| ||||||||||||||||||||||| ||||||||||| ||||| ||| | |||| |||||||||    
T  6757523 agattgctacaacttgttggggtacagcttaatggagattttaaatatctttcaggagatcttagatggttgtacttgcatggatt 6757608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 268 - 455
Target Start/End: Complemental strand, 6588921 - 6588740
Alignment:
Q  268 aatttcagggaacagaagctgtcaagggactggctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaact 367  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||      ||| || | |||||||||||||||||||||||||||||    
T  6588921 aatttcagggaacagaagctgtcaagggactggctttggagtttccaagaaaagat------tgtttggaaaccaaagcatttaagaagatgaataaact 6588828  T
Q  368 cagattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggattt 455  Q
    |||||||||||  ||| | |||||  |||| || ||||||||||| || ||||||||||| |||| |||||| || ||||||||||||    
T  6588827 cagattgcttcgccttgctggggtgaagctgaagggagattttaagtatctttcaggagatcttaagtggctgtattggcatggattt 6588740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 270 - 457
Target Start/End: Original strand, 6714818 - 6714999
Alignment:
Q  270 tttcagggaacagaagctgtcaagggactggctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaactca 369  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||||| ||      ||||||||| | |||||| ||||||||||||||||||||||||    
T  6714818 tttcagggaacagaagctgttaagggtctggctttggagtttccaagagaa------gtttgtctggaaaccaaatcatttaagaagatgaataaactca 6714911  T
Q  370 gattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 457  Q
    |||||||||  ||| | |||||  ||||||| |||||||||||||| ||||||||||| || | |||||| |||||||||||||||||    
T  6714912 gattgcttcgccttgctggggtgaagcttaaaggagattttaaatatctttcaggagatctgaagtggctgtactggcatggatttcc 6714999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 271 - 457
Target Start/End: Complemental strand, 6533670 - 6533484
Alignment:
Q  271 ttcagggaacagaagctgtcaagggactggctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaactcag 370  Q
    ||||||||||||||||| ||||||| |||||||||  |||||   |  |||| | ||||||||||||||| || |||||||||||||||||||| |||||    
T  6533670 ttcagggaacagaagctatcaagggtctggctttgaagtttcagggtgaaaaaacagtttgtctgaatactaacgcatttaagaagatgaataagctcag 6533571  T
Q  371 attgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 457  Q
    ||||||||||||| | || || || || ||||||||||||||||  |||||| |||| ||||| ||||| |||||||||||||||||    
T  6533570 attgcttcaacttgctggtgtgcaactgaatggagattttaaatgtctttcaagagatcttagatggctgtactggcatggatttcc 6533484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 268 - 457
Target Start/End: Original strand, 6726893 - 6727076
Alignment:
Q  268 aatttcagggaacagaagctgtcaagggactggctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaact 367  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||| || | ||      ||| || | || |||||||||||||| |||||||||||    
T  6726893 aatttcagggaacagaaggtgtcaagggactggctttggagtttccaacaagagat------tgtttggaaacaaaagcatttaagaaaatgaataaact 6726986  T
Q  368 cagattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 457  Q
    |||||| ||||  ||| | |||||  ||||||| |||||||||||||| ||||||||||| || | |||||| |||||||||||||||||    
T  6726987 cagattacttcgccttgctggggtgaagcttaaaggagattttaaatatctttcaggagatctgaagtggctgtactggcatggatttcc 6727076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 272 - 457
Target Start/End: Original strand, 6772180 - 6772359
Alignment:
Q  272 tcagggaacagaagctgtcaagggactggctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaactcaga 371  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||| || ||      |||||  | ||||||||||||||||||||||| |||||||||    
T  6772180 tcagggaacagaagctgtcaaaggactagctttggagtttccaagagaagat------tgtctagaaaccaaagcatttaagaagatgaacaaactcaga 6772273  T
Q  372 ttgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 457  Q
    |||||||  ||  | || || || ||||| ||||||| ||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  6772274 ttgcttcgcctcgctggtgtgcaacttaagggagattataaatacctttcaagagatcttaggtggctgtactggcatggatttcc 6772359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 268 - 457
Target Start/End: Original strand, 6814632 - 6814815
Alignment:
Q  268 aatttcagggaacagaagctgtcaagggactggctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaact 367  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||||| ||||| ||      |||||| | |||||||||||||| |||||||| |||||    
T  6814632 aatttcagggaaccgaagctgtgaagggactggctttggagtttccaggaaaagat------tgtctggacaccaaagcatttaaaaagatgaacaaact 6814725  T
Q  368 cagattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 457  Q
    |||||||||||  ||  | |||||  ||||||| |||||||||||||| |||||| |||| |||| || ||| |||||||||||||||||    
T  6814726 cagattgcttcgcctcactggggtgaagcttaagggagattttaaatatctttcaagagatcttaagttgctatactggcatggatttcc 6814815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 268 - 457
Target Start/End: Original strand, 6835234 - 6835423
Alignment:
Q  268 aatttcagggaacagaagctgtcaagggactggctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaact 367  Q
    ||||||||||| |||||||||||||||| |||||||||   ||||||| | |||||  |||| |||| ||| |||| |||||| |||||||| |||||||    
T  6835234 aatttcagggagcagaagctgtcaagggtctggctttgaaatttccaaaagaaaatttagttcgtctaaattccaatgcatttcagaagatgtataaact 6835333  T
Q  368 cagattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 457  Q
    |||||||||||||||| | |||||  | ||||| |||||||||||| |||||||  || | ||||| ||| | |||||||||||||||||    
T  6835334 cagattgcttcaacttgctggggtgaaacttaaaggagattttaaacacctttcgagaaatcttagatggttgtactggcatggatttcc 6835423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 269 - 456
Target Start/End: Original strand, 6795363 - 6795544
Alignment:
Q  269 atttcagggaacagaagctgtcaagggactggctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaactc 368  Q
    |||| |||||||| || |||||||||| || ||||||| ||||||||||||| ||      |||||| | || |||||||||||||||||||| ||||||    
T  6795363 atttaagggaacaaaatctgtcaaggggctagctttggagtttccaagaaaagat------tgtctggaaactaaagcatttaagaagatgaacaaactc 6795456  T
Q  369 agattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttc 456  Q
    ||||||||||  ||  | |||||  ||||||| ||||||||||||||||||||| |||| |||| |||||| || |||||||||||||    
T  6795457 agattgcttcgcctcgctggggtgaagcttaagggagattttaaatacctttcaagagatcttaagtggctgtattggcatggatttc 6795544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 421
Target Start/End: Original strand, 4334669 - 4334752
Alignment:
Q  338 taccaaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttc 421  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || |  || ||| |||||||||||||||| |||||    
T  4334669 taccaaagcatttaagaagatgaagaaactcagattgcttcaactttctggcgcacaacttgatggagattttaaatatctttc 4334752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6674719 - 6674792
Alignment:
Q  1 tgagaaccgcagtaggttgtggcgccgtgaggaagtgtatgatgtattattaaagcagaaggtaattactaact 74  Q
    |||||||||||||||||||||||||| ||| ||||| | |||| |||||| |||||||||||||||||||||||    
T  6674719 tgagaaccgcagtaggttgtggcgccatgaagaagtatttgatatattatcaaagcagaaggtaattactaact 6674792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 6771928 - 6772017
Alignment:
Q  9 gcagtaggttgtggcgccgtgaggaagtgtatgatgtattattaaagcagaaggtaattactaactacagcacttcttgtatggtttata 98  Q
    ||||||| ||||||| |||||||||||||| |||| |||||| ||| ||||||||||||||||| || || ||||||||||| |||||||    
T  6771928 gcagtagattgtggcaccgtgaggaagtgtttgatatattatcaaatcagaaggtaattactaattagagaacttcttgtatagtttata 6772017  T

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Target: chr4; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 269 - 457
Target Start/End: Original strand, 6751864 - 6752052
Alignment:
Q  269 atttcagggaacagaagctgtcaagggactggctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaactc 368  Q
    |||||||||| ||| |||||| ||||| |||||||||   ||||||||| |||||| ||||   |||||| |||  ||||||||||| ||| ||||||||    
T  6751864 atttcagggagcaggagctgtaaagggtctggctttgaaatttccaagagaaaatatagttcacctgaattccagtgcatttaagaatatgtataaactc 6751963  T
Q  369 agattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 457  Q
    ||||||||||||||| |  ||||  |  |||| |||||||||||| | |||||  || | ||||| ||| | || ||||||||||||||    
T  6751964 agattgcttcaacttgcttgggtgaaatttaaaggagattttaaacatctttcgagaaatcttagatggttgtattggcatggatttcc 6752052  T

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Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 422
Target Start/End: Complemental strand, 4125314 - 4125235
Alignment:
Q  343 aagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttca 422  Q
    ||||||||||||||||||| ||||||||||||||||||||||| || |  || ||| |||||||||||||||| ||||||    
T  4125314 aagcatttaagaagatgaagaaactcagattgcttcaactttctggtgcacaacttgatggagattttaaatatctttca 4125235  T

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Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 6547155 - 6547085
Alignment:
Q  2 gagaaccgcagtaggttgtggcgccgtgaggaagtgtatgatgtattattaaagcagaaggtaattactaa 72  Q
    |||||||||||||||||||||||||||||||| | |  ||||||||||| |||||| ||||||||||||||    
T  6547155 gagaaccgcagtaggttgtggcgccgtgaggatgcgcttgatgtattatcaaagcataaggtaattactaa 6547085  T

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Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 422
Target Start/End: Original strand, 4352406 - 4352490
Alignment:
Q  338 taccaaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttca 422  Q
    ||||||||||||| |||| ||||| |||||||||||||| |||||||| || || || ||| |||||||||||||||| ||||||    
T  4352406 taccaaagcatttgagaacatgaagaaactcagattgctgcaactttctggtgtacaacttgatggagattttaaatatctttca 4352490  T

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Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 422
Target Start/End: Original strand, 4344127 - 4344211
Alignment:
Q  338 taccaaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttca 422  Q
    ||||||||||||| |||| ||||| ||||| |||||||| |||||||| || || || ||| |||||||||||||||| ||||||    
T  4344127 taccaaagcatttgagaacatgaagaaacttagattgctgcaactttctggtgtacaacttgatggagattttaaatatctttca 4344211  T

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Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 6726647 - 6726743
Alignment:
Q  1 tgagaaccgcagtaggttgtggcgccgtgaggaagtgtatgatgtattattaaagcagaaggtaattactaactacagcacttcttgtatggtttat 97  Q
    |||||| |||||||| |||||||| | ||||||||||| |||| |||||  |||||  |||||||||||||| || || ||||||||||| ||||||    
T  6726647 tgagaagcgcagtagattgtggcggcatgaggaagtgtttgatatattagaaaagcgtaaggtaattactaattagagaacttcttgtatagtttat 6726743  T

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Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 458
Target Start/End: Original strand, 4359584 - 4359703
Alignment:
Q  339 accaaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggc 438  Q
    |||||| ||||| |||| ||||| |||||||||||||| ||||||||||| || || ||| |||||||||||||| | |||||| || || | || ||||    
T  4359584 accaaaacatttgagaacatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggc 4359683  T
Q  439 tttactggcatggatttcct 458  Q
    |  | ||| |||||||||||    
T  4359684 tgcagtggaatggatttcct 4359703  T

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Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 6534905 - 6534834
Alignment:
Q  1 tgagaaccgcagtaggttgtggcgccgtgaggaagtgtatgatgtattattaaagcagaaggtaattactaa 72  Q
    ||||||||| |||||||||||||| |||||||||| |  |||| |||||| || ||||||||||||||||||    
T  6534905 tgagaaccgaagtaggttgtggcgtcgtgaggaagcgcttgatatattatcaatgcagaaggtaattactaa 6534834  T

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Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 6751693 - 6751764
Alignment:
Q  110 gaggaagagaactaaacattgaggaatcaattattaacaatcatttggattcttaattatcaaatgaaatgt 181  Q
    ||||| ||||||||||||||||  |||||||||  |||| |||||||||||||||||||||| | |||||||    
T  6751693 gaggaggagaactaaacattgattaatcaattaacaacattcatttggattcttaattatcatacgaaatgt 6751764  T

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Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 422
Target Start/End: Complemental strand, 4134705 - 4134621
Alignment:
Q  338 taccaaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttca 422  Q
    |||||| |||||| |||| ||||| ||||| ||||||||||||| ||| || || || ||| |||||||||||||||| ||||||    
T  4134705 taccaatgcatttgagaacatgaagaaactgagattgcttcaaccttctggtgtacaacttgatggagattttaaatatctttca 4134621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 415
Target Start/End: Complemental strand, 4321905 - 4321836
Alignment:
Q  346 catttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaata 415  Q
    ||||| |||| ||||| |||||||||||||| |||||||| || || || ||| ||||||||||||||||    
T  4321905 catttgagaacatgaagaaactcagattgctgcaactttctggtgtacaacttgatggagattttaaata 4321836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 6757252 - 6757325
Alignment:
Q  115 agagaactaaacattgaggaatcaattattaacaatcatttggattcttaattatcaaatgaaatgtcaaaatt 188  Q
    ||||||||||||||||| |||| |||||| |||| |||| ||||||| ||| ||||| ||||||| | ||||||    
T  6757252 agagaactaaacattgatgaatgaattatgaacattcatctggattcgtaaatatcacatgaaatatgaaaatt 6757325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 6795158 - 6795255
Alignment:
Q  1 tgagaaccgcagtaggttgtggcgccgtgaggaagtgtatgatgtattattaaagcagaaggtaattactaactacagcacttcttgtatggtttata 98  Q
    |||||| ||||||||||| ||||||| || |||||||| |||| |||||  ||||   |||||||||||||| |  || ||||||||||| |||||||    
T  6795158 tgagaagcgcagtaggttatggcgccatggggaagtgtttgatatattagaaaagtgtaaggtaattactaatttgagaacttcttgtatagtttata 6795255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 6714643 - 6714680
Alignment:
Q  111 aggaagagaactaaacattgaggaatcaattattaaca 148  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  6714643 aggaagagaactaatcattgcggaatcaattattaaca 6714680  T

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Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6814488 - 6814525
Alignment:
Q  1 tgagaaccgcagtaggttgtggcgccgtgaggaagtgt 38  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  6814488 tgagaagcgcagtaggttgtggcggcgtgaggaagtgt 6814525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 6674855 - 6674903
Alignment:
Q  133 gaatcaattattaacaatcatttggattcttaattatcaaatgaaatgt 181  Q
    ||||||||| |||| | ||||||| |||||||||||||| |||||||||    
T  6674855 gaatcaattcttaatattcatttgtattcttaattatcagatgaaatgt 6674903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 1 - 457
Target Start/End: Original strand, 5420 - 5873
Alignment:
Q  1 tgagaaccgcagtaggttgtggcgccgtgaggaagtgtatgatgtattattaaagcagaaggtaattactaactacagcacttcttgtatggtttataca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5420 tgagaaccgcagtaggttgtggcgccgtgaggaagtgtatgatgtattattaaagcagaaggtaattactaactatagcacttcttgtatggtttataca 5519  T
Q  101 acagtgaaggaggaagagaactaaacattgaggaatcaattattaacaatcatttggattcttaattatcaaatgaaatgtcaaaattgttataaactag 200  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5520 acagtgaagga---agagaactaaacattgaggaatcaattattaacaatcatttggattcttaattatcaaatgaaatgtcaaaattgttataaactag 5616  T
Q  201 tacactacaaaatgtttagctggtggatatctaagctatacannnnnnnnnnnnnnnnnnnnnnnccaatttcagggaacagaagctgtcaagggactgg 300  Q
    ||||||||||||||||||||| |||||||||||||||||||                        |||||||||||||||||||||||||||||||||||    
T  5617 tacactacaaaatgtttagctagtggatatctaagctatacgttttctgtttttgtttttgttttccaatttcagggaacagaagctgtcaagggactgg 5716  T
Q  301 ctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaa 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5717 ctttggtgtttccaagaaaaaataaagtttgtctgaataccaaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaa 5816  T
Q  401 tggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 457  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  5817 tggagattttaaatacctttcaggagaacttaggtggctgtactggcacggatttcc 5873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0813 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0813
Description:

Target: scaffold0813; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 370 - 457
Target Start/End: Complemental strand, 5778 - 5691
Alignment:
Q  370 gattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttactggcatggatttcc 457  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  5778 gattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctgtactggcacggatttcc 5691  T

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Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 421
Target Start/End: Original strand, 5424753 - 5424832
Alignment:
Q  342 aaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttc 421  Q
    |||||||| ||||||||||  | ||||||||||||||||||| | |||||  | |||||||||||||||||||| |||||    
T  5424753 aaagcattcaagaagatgacgagactcagattgcttcaacttgctggggtaaaacttaatggagattttaaatatctttc 5424832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 458
Target Start/End: Original strand, 5342765 - 5342881
Alignment:
Q  342 aaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggcttt 441  Q
    ||||||||| | |||||||||||||| ||||||||||||||||| || || || ||| ||||||||||| | || |||||  || |||| || ||||| |    
T  5342765 aaagcatttgaaaagatgaataaactaagattgcttcaactttctggcgtacaacttgatggagattttgactatctttctagaaaactaagatggctat 5342864  T
Q  442 actggcatggatttcct 458  Q
      ||| |||||||||||    
T  5342865 gttggaatggatttcct 5342881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 422
Target Start/End: Original strand, 5349377 - 5349457
Alignment:
Q  342 aaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttca 422  Q
    |||||||| ||||||||||| | ||||||||||||||||||| | |||||  | ||| ||||||||||| |||| ||||||    
T  5349377 aaagcattcaagaagatgaagagactcagattgcttcaacttgctggggtaaaacttgatggagattttgaatatctttca 5349457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 421
Target Start/End: Complemental strand, 5068075 - 5067996
Alignment:
Q  342 aaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttc 421  Q
    |||||||| ||||||||||| | ||||||||||||||||||| | |||||  | ||| ||||||||||| |||| |||||    
T  5068075 aaagcattcaagaagatgaagagactcagattgcttcaacttgctggggtaaaccttgatggagattttgaatatctttc 5067996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 421
Target Start/End: Original strand, 5095169 - 5095248
Alignment:
Q  342 aaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttc 421  Q
    |||||||| ||||||||||  | ||||||||||||||||||| | |||||| | ||| ||||||||||| |||| |||||    
T  5095169 aaagcattcaagaagatgacgagactcagattgcttcaacttgctggggttaaacttgatggagattttgaatatctttc 5095248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 421
Target Start/End: Original strand, 5369485 - 5369564
Alignment:
Q  342 aaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttc 421  Q
    |||||||| ||||||||||| |||||||||||||| |||||| | |||||  | ||| ||||||||||| |||| |||||    
T  5369485 aaagcattcaagaagatgaacaaactcagattgctccaacttgctggggtaaaacttgatggagattttgaatatctttc 5369564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 383
Target Start/End: Original strand, 5396187 - 5396232
Alignment:
Q  338 taccaaagcatttaagaagatgaataaactcagattgcttcaactt 383  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||||    
T  5396187 taccaaagcattcaagaagatgaaaaaactcagactgcttcaactt 5396232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 457
Target Start/End: Original strand, 5432545 - 5432657
Alignment:
Q  345 gcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggctttact 444  Q
    ||||||||||||||||| ||||||||||||||| ||||| | || || |||||| ||||  ||||| || | |||||| || | || || |||||||  |    
T  5432545 gcatttaagaagatgaagaaactcagattgcttgaacttgctggtgtgcagcttgatgggaattttgaacatctttcaagaaatctgagatggctttctt 5432644  T
Q  445 ggcatggatttcc 457  Q
    || ||||||||||    
T  5432645 ggaatggatttcc 5432657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 415
Target Start/End: Complemental strand, 5158425 - 5158352
Alignment:
Q  342 aaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaata 415  Q
    |||||||| ||||||||||| | ||| ||||||||||||||| | |||||  | |||  |||||||||||||||    
T  5158425 aaagcattcaagaagatgaagagacttagattgcttcaacttgctggggtcaaacttgttggagattttaaata 5158352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 458
Target Start/End: Complemental strand, 5147817 - 5147701
Alignment:
Q  342 aaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggcttt 441  Q
    |||||||||||||||||||  | ||| ||||||||||||||| | || || || ||| |||| |||||| ||||| ||||  || | || || |||||||    
T  5147817 aaagcatttaagaagatgacaagactgagattgcttcaacttactggagtacaacttgatggggattttgaatacatttcgagaaatctgagatggcttt 5147718  T
Q  442 actggcatggatttcct 458  Q
      ||| |||||||||||    
T  5147717 cttggaatggatttcct 5147701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 458
Target Start/End: Original strand, 5175996 - 5176112
Alignment:
Q  342 aaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggcttt 441  Q
    ||||||||| |||| ||||| |||||||| |||||||||||| | || || || ||| |||| |||||| | || |||||| || | || || |||||||    
T  5175996 aaagcatttgagaacatgaagaaactcaggttgcttcaacttgctggtgtgcaacttgatggggattttgagtatctttcaagaaatctgagatggcttt 5176095  T
Q  442 actggcatggatttcct 458  Q
      ||| |||||||||||    
T  5176096 cttggaatggatttcct 5176112  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 458
Target Start/End: Original strand, 5277823 - 5277939
Alignment:
Q  342 aaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggcttt 441  Q
    ||||||||| |||| ||||| |||||||| |||||||||||| | || || || ||| |||| |||||| | || |||||| || | || || |||||||    
T  5277823 aaagcatttgagaacatgaagaaactcagtttgcttcaacttgctggtgtgcaacttgatggggattttgagtatctttcaagaaatctgagatggcttt 5277922  T
Q  442 actggcatggatttcct 458  Q
      ||| |||||||||||    
T  5277923 cttggaatggatttcct 5277939  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 430
Target Start/End: Original strand, 5382750 - 5382834
Alignment:
Q  346 catttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaact 430  Q
    |||||||||||||| | | ||| ||||||||||||||| | || || || ||| |||||||||| || || ||||||||| ||||    
T  5382750 catttaagaagatggaaagactaagattgcttcaacttgctggagtacaacttgatggagatttcaagtatctttcaggaaaact 5382834  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 388
Target Start/End: Original strand, 8876991 - 8877037
Alignment:
Q  342 aaagcatttaagaagatgaataaactcagattgcttcaactttccgg 388  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||||    
T  8876991 aaagcatttaagaagatgaagagactcagattgcttcaacttgccgg 8877037  T

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Target: scaffold0373 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11143 - 11046
Alignment:
Q  1 tgagaaccgcagtaggttgtggcgccgtgaggaagtgtatgatgtattattaaagcagaaggtaattactaactacagcacttcttgtatggtttata 98  Q
    |||||| ||||||||||| ||||||| || |||||||| |||| |||||  ||||   |||||||||||||| |  || ||||||||||| |||||||    
T  11143 tgagaagcgcagtaggttatggcgccatggggaagtgtttgatatattagaaaagtgtaaggtaattactaatttgagaacttcttgtatagtttata 11046  T

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Target: chr7 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 36214751 - 36214710
Alignment:
Q  342 aaagcatttaagaagatgaataaactcagattgcttcaactt 383  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  36214751 aaagcatttaagaagatgaaaagactcagattgcttcaactt 36214710  T

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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 458
Target Start/End: Original strand, 18934463 - 18934579
Alignment:
Q  342 aaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttcaggagaacttaggtggcttt 441  Q
    ||||||||  ||||||||||||| || | ||||||||||||||| || || || |||||||||||||  ||||| |||||   ||| ||||  | |||||    
T  18934463 aaagcattcgagaagatgaataagcttaaattgcttcaactttctggtgtacaacttaatggagattacaaatatctttcgaaagatcttatattgcttt 18934562  T
Q  442 actggcatggatttcct 458  Q
      |||||||||||||||    
T  18934563 gttggcatggatttcct 18934579  T

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