View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15136_low_4 (Length: 268)
Name: NF15136_low_4
Description: NF15136
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15136_low_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 83 - 268
Target Start/End: Complemental strand, 43317134 - 43316937
Alignment:
| Q |
83 |
gtactactgtataaagatgcattttctcatgctagtacaagtgatgcttgacttgactaccaagttttgatt------------cataatcaatcaacct |
170 |
Q |
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| T |
43317134 |
gtactactgtataaagatgcattttctcatgctagtacaagtgatgcttgacttgactaccaagttttgattaatatttttattcataatcaatcaacct |
43317035 |
T |
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| Q |
171 |
tcacagtagccagtagccaccgtttgagaattaaataattaatctcaactaattattttttaaaacaatagggaggatcataaccaaagcaataatta |
268 |
Q |
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| T |
43317034 |
tcacagtagccagtagccaccatttgagaattaattaattaatctcaactaattattttttaaaacaatagggaggattataaccaaagcaataatta |
43316937 |
T |
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