View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15144_low_4 (Length: 392)
Name: NF15144_low_4
Description: NF15144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15144_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 343; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 7080744 - 7081118
Alignment:
| Q |
1 |
tacataggaaccaaccacattgtgctatgtcaccacccctgaaacatttcaactaaattccaagtcactcttgttagcttatgctctcaaatttttgacc |
100 |
Q |
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| T |
7080744 |
tacataggaaccaaccacattgtgctatgtcaccacccctgaaatatttcaactaaattctaagtcactcttgttagcttatgctctcaaatttttgaca |
7080843 |
T |
|
| Q |
101 |
ttgattccctaacatcggagaatcttgcagttatacaaatcaagacggtccaaatttaaagctcgataaataaaaagatacgttgtaaatctcgatcaaa |
200 |
Q |
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| T |
7080844 |
ttgattccctaacatcggagaatcttgcacttatacaaatcaagacggtccaaatttaaagcttgataaataaaaagatacgttgtaaatcttgatcaaa |
7080943 |
T |
|
| Q |
201 |
atcagatgatcgagattttcatgcattgactactttgaagcatttttccgacgacttgggctaaacgtttgaaacacaacactacctattgcaggaaact |
300 |
Q |
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| T |
7080944 |
atcagatgatcgagattttcatgcattgactactttgaagcatttttccgacgacgtggggtaaacgtttgaaacacaacactacctattgcaggaaact |
7081043 |
T |
|
| Q |
301 |
gatccatagcacaactcctacatttcaacccaagaggctccaatgcaccagtaacctttctccaaacctcattgt |
375 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7081044 |
gatccatagcacaactcctacatttcaacccaagaggctccaatgcaccagtaacctttctccaaacctcattgt |
7081118 |
T |
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