View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15145_high_24 (Length: 221)
Name: NF15145_high_24
Description: NF15145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15145_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 43216931 - 43217095
Alignment:
| Q |
40 |
aacatcaaagcagtgaaaaggcaaggaaagacacaatgcatgcttggctatagtgtctgccacttaattagcttccctgacgatatgacgccaacgaacc |
139 |
Q |
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| T |
43216931 |
aacatcaaagcagtgaaaaggcaaggaaagacacaatgcatgcttggctatagtgtctgccacttaattagcttccctgacgatatgacgccaacgaacc |
43217030 |
T |
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| Q |
140 |
tcaacattaccgaagatgaaacaagagtcgctaggggataatttgagtgatccactgagcaactt |
204 |
Q |
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| T |
43217031 |
tcaacattaccgaagatgaaacaagagtcgctaggggataatttgagtgatccactgagcaactt |
43217095 |
T |
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