View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15145_low_13 (Length: 271)
Name: NF15145_low_13
Description: NF15145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15145_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 41976872 - 41977112
Alignment:
| Q |
16 |
atccacataaattcccaattaaaaacaaacatcaatgcagcacaagaaccaaatcctataagtatagagcatatttaattatttatatgctgcagcgtgc |
115 |
Q |
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| T |
41976872 |
atccacataaattcccaattaaaaacaaacatcaatgcagcacaagaaccaaatcctataagtataaagcatatttaattatttatatgctgcagcgtgc |
41976971 |
T |
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| Q |
116 |
atgtttgatatcacggtggctcactgtgattctgaaatccaccacgttaccaaacaattagtaatgaagaaacagctattgcactgttaaacaaataaag |
215 |
Q |
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| T |
41976972 |
atgtttgatatcacggtggctcactgtgattctgaaatccaccacgataccaaacaattagtaatgaagaaacagctattgcactgttaaacaaataaag |
41977071 |
T |
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| Q |
216 |
caacagcatagtcagccgcagaaataaatataaaccacatt |
256 |
Q |
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| T |
41977072 |
caacagcatagtcagccgcagaaataaatataaaccacatt |
41977112 |
T |
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