View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15146_low_2 (Length: 558)
Name: NF15146_low_2
Description: NF15146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15146_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 483; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 483; E-Value: 0
Query Start/End: Original strand, 26 - 540
Target Start/End: Complemental strand, 37194607 - 37194098
Alignment:
| Q |
26 |
aacaaaatgaatcgcatttcaaaattactgtgaaaaacacctgcatttaatggccaatgacacctcataaataacttaagagaagacatgcgagtttacc |
125 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37194607 |
aacaaaatgaatcgcatttcaa-----ctgtgaaaaacacctgcatttaatggccaatgacacctcataaataacttaagagaagacatgcgagtttacc |
37194513 |
T |
|
| Q |
126 |
ttagaaaaatattagaaatgcaaacttcaatgtgtaatttctttggtaattctatttgcggtaattctaacatttgcaaaagacatatgatgtgttccgg |
225 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37194512 |
ttagaaaaatattagaaatgcaaacttcaatgtgtaatttctttggtaattctatttgcggtaattctaacatttgcaaaagacatatgatgtgttccgg |
37194413 |
T |
|
| Q |
226 |
attagacctagatgcccaagaatctcatgactttcatcgtattcaaacaagtccaaatacggagtaggtctcatcataccggatctccttaaactcgtaa |
325 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37194412 |
attagacctagatgcccaagaatctcatgactttcatcgcattcaaacaagtccaaatacggagtaggtctcatcataccggatctccttaaactcgtaa |
37194313 |
T |
|
| Q |
326 |
catcctacgcctttaatgcccacaacagctacctgactaatactcgtggaataatgccgttcgtaatggctgctcttaactcctcatcagctcatcctaa |
425 |
Q |
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| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37194312 |
cgtcctacgcctttaatgcccacaacagctacctgactaatactcgtggaataatgccgttcgtaatggctgctcttaactcctcatcagctcatcctaa |
37194213 |
T |
|
| Q |
426 |
tgtatatatgtcctcatcgccctcaacatcagggtatacaatctctaatcctaggacctctcactctcattgcgctcttagtgacttaagcgtcagagtg |
525 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
37194212 |
tgtatatatgtcctcatcgccctcaacatcagggtatacaatctctaatcctaggacctctcactctcattgcgctcttactgacttaagcgtcagagtg |
37194113 |
T |
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| Q |
526 |
catgcaggtactacc |
540 |
Q |
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||||||||||||||| |
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| T |
37194112 |
catgcaggtactacc |
37194098 |
T |
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