View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15146_low_22 (Length: 259)
Name: NF15146_low_22
Description: NF15146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15146_low_22 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 31 - 257
Target Start/End: Original strand, 24193875 - 24194101
Alignment:
| Q |
31 |
tatcctacacacaaaacagttatctaattcaatgcctcggtagagaaagagtgacagaaacatacggaagaataacagaagaccaagaaaatttctcttc |
130 |
Q |
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| T |
24193875 |
tatcctacacacaaaacagttatctaattcaatgcctcagtagagaaagagtgacagaaacatacggaagaataacagaagaccaagaaaatttctcttg |
24193974 |
T |
|
| Q |
131 |
gtcggaagcaacagactcagaattgttcccagcagaatactcctgcgcttgaacctgtccagaagatggataaacaaaattagactaaaaacgaataaat |
230 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
24193975 |
gtcggaagcaacagactcagaattgttcccagcagaatactcctgcgcttgaacctgtccagaagatggataaacaaaattagactaaaaacgaagaaat |
24194074 |
T |
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| Q |
231 |
tttgatgagtttaccagtttctgagta |
257 |
Q |
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||||||||||||||||||||||||||| |
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| T |
24194075 |
tttgatgagtttaccagtttctgagta |
24194101 |
T |
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