View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15146_low_26 (Length: 249)
Name: NF15146_low_26
Description: NF15146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15146_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 1325121 - 1325362
Alignment:
| Q |
1 |
agaggtaataaacgattggaaactaaattaagcttttagaacatttatcggatcacaatccacgtttgtaacttatagcctctagtagaattttagagac |
100 |
Q |
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| T |
1325121 |
agaggtaataaacgattggaaactaaattaagcttttagaacatttatcggatcacaatccacgtttgtaacttatagcctctagtagaattttagagac |
1325220 |
T |
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| Q |
101 |
ctagttaatctctaacaaacattactcatttctctctcttcttttttcatcattgcactctaattgcttccattgttctcaaccatcccatgaccacacc |
200 |
Q |
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| T |
1325221 |
ctagttaatctctaacaaacattactcatttctctctcttcttttttcatcattgcactctaattgcttccattgttctcaaccatcccatgaccacacc |
1325320 |
T |
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| Q |
201 |
acaaaatttcatgtaaggtaaaattcttatgtgacctttgct |
242 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||| |
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| T |
1325321 |
acaaaatttcttgtaaggtaaaattcttatgtgacctttgct |
1325362 |
T |
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