View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15146_low_35 (Length: 203)
Name: NF15146_low_35
Description: NF15146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15146_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 29061833 - 29062008
Alignment:
| Q |
11 |
agatgaagagagaaaatgcctnnnnnnngtgtgtggagataaagtcaaagaagagagggaaggctctgatagtacatagatgtctcataagtgaaaggat |
110 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |
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| T |
29061833 |
agatgaagagagaaaatgcctaaaaaaagtgtgtggagataaagtcaaagaagagagggaaggctctgacattacatagatgtctcataagtgaaaggat |
29061932 |
T |
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| Q |
111 |
cttattgaccagtaacaaattcagacactttaatttgtctttgtgtaggaaaaagttatcatgaattacacatatg |
186 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29061933 |
cttattgaccagtaacaaattcagacattttaatttgtctttgtgtaggaaaaagttatcatgaattacacatatg |
29062008 |
T |
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