View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15146_low_7 (Length: 394)
Name: NF15146_low_7
Description: NF15146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15146_low_7 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 20 - 384
Target Start/End: Complemental strand, 22831036 - 22830672
Alignment:
| Q |
20 |
atgatgatactggtcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttac |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
22831036 |
atgatgatactggtcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaagattgatgttac |
22830937 |
T |
|
| Q |
120 |
cttagctccagttagtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgtt |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22830936 |
cttagctccagttagtgttggttttagtcataaaccaacacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgtt |
22830837 |
T |
|
| Q |
220 |
ggattctcatcttcaacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgacc |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22830836 |
ggattctcatcttcaacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaatctcaaaaccttgaaatctctgacc |
22830737 |
T |
|
| Q |
320 |
ttcctgtagtaagagtatttgctgagnnnnnnnngtccaaatttttaactgttaggttgcctttg |
384 |
Q |
| |
|
|||||| || |||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
22830736 |
ttcctggagaaagagtatttgctgagaaaaaaaagtccaaatttttaactgttcggttgcctttg |
22830672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 33 - 384
Target Start/End: Complemental strand, 22840044 - 22839693
Alignment:
| Q |
33 |
tcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctccagtt |
132 |
Q |
| |
|
|||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||| || |
|
|
| T |
22840044 |
tcgattcagggatttatccctctccagtggatatcctatgcaagtatggattgaatatgatagagtgaagaaaaagattgatgttaccttagctccattt |
22839945 |
T |
|
| Q |
133 |
agtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatctt |
232 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22839944 |
agtgttggttttagtcataaaccaacacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatctt |
22839845 |
T |
|
| Q |
233 |
caacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcctgtagtaag |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |
|
|
| T |
22839844 |
caacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaatctcaaaaccttgaaatctctgaccttcctggagaaag |
22839745 |
T |
|
| Q |
333 |
agtatttgctgagnnnnnnnngtccaaatttttaactgttaggttgcctttg |
384 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
22839744 |
agtatttgctgagaaaaaaaagtccaaatttttaactgttcggttgcctttg |
22839693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 30 - 384
Target Start/End: Complemental strand, 22815022 - 22814668
Alignment:
| Q |
30 |
tggtcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctcca |
129 |
Q |
| |
|
||||| ||||||| | ||||||||| ||| |||| |||||| |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
22815022 |
tggtcaattcagggagttatccctttccaatggatttcctatacaggtatggattgactatgatggagtgaagaaaaagattgatgttactttagctcca |
22814923 |
T |
|
| Q |
130 |
gttagtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcat |
229 |
Q |
| |
|
| ||||||||| |||| ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
22814922 |
atgagtgttggtgctagtaataaaccaacacaacctttgttatcattgaccaaagatctttcttcaattctcaacaatagaatgtatgttggattctcat |
22814823 |
T |
|
| Q |
230 |
cttcaacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcctgtagt |
329 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| ||||| |||||| | |
|
|
| T |
22814822 |
cttcaacagggttacttgtagcttctcattatattcttgggtggagttttaaggttaatggccaagctcaaaaccttgaaatatctgaacttcctaagct |
22814723 |
T |
|
| Q |
330 |
aagagtatttgctgagnnnnnnnngtccaaatttttaactgttaggttgcctttg |
384 |
Q |
| |
|
|| ||||||||||||| ||| ||||||||||||||| ||||||||||| |
|
|
| T |
22814722 |
aacagtatttgctgaggtaaaaaagtctaaatttttaactgttgggttgcctttg |
22814668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 30 - 324
Target Start/End: Complemental strand, 22889287 - 22888993
Alignment:
| Q |
30 |
tggtcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctcca |
129 |
Q |
| |
|
||||| ||||| | ||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| |
|
|
| T |
22889287 |
tggtcaattcaaggatttatccctttccagtggataccctatgcaggtatggattgaatatgatggagtgaagaaaaagattgatgttactttagcacca |
22889188 |
T |
|
| Q |
130 |
gttagtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcat |
229 |
Q |
| |
|
| ||||||||| |||| ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
22889187 |
atgagtgttggtgctagtaataaaccaacacaacctttgttatcattgaccaaagatctttcttcaattctcaacaatagaatgtatgttggattctcat |
22889088 |
T |
|
| Q |
230 |
cttcaacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcct |
324 |
Q |
| |
|
||||||||||||| || | ||||||||| ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
22889087 |
cttcaacagggttaatggtagcttctcagtatattcttggttggagttttaaggttaatggtcaagctcaaaaccttgaaatctctgaacttcct |
22888993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 20 - 322
Target Start/End: Complemental strand, 22880596 - 22880294
Alignment:
| Q |
20 |
atgatgatactggtcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttac |
119 |
Q |
| |
|
|||||||| || |||||||| | ||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||| |||||| ||||| |
|
|
| T |
22880596 |
atgatgattatgatcgattcaaggatttatccctttccagtggatatcccatgcaggtatggattgactatgatggagtgaagaaaaagattgaggttac |
22880497 |
T |
|
| Q |
120 |
cttagctccagttagtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgtt |
219 |
Q |
| |
|
|||||||| ||||||||||||||| | ||||||||| || || ||| |||||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
22880496 |
attagctccgattagtgttggttttaataataaaccaacacgacatttgttgtcattgaccaaagatctttctccaattctcaacaatagtatgtatgtt |
22880397 |
T |
|
| Q |
220 |
ggattctcatcttcaacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgacc |
319 |
Q |
| |
|
||||| |||||||||||| |||| ||| ||||||||||||| ||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
22880396 |
ggattatcatcttcaacaaggttaattttagcttctcattatgttcttggttggagttttaaggttaatggtcaagctcaaaaccttgaaatctctgagc |
22880297 |
T |
|
| Q |
320 |
ttc |
322 |
Q |
| |
|
||| |
|
|
| T |
22880296 |
ttc |
22880294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 111 - 325
Target Start/End: Complemental strand, 22885539 - 22885325
Alignment:
| Q |
111 |
tgatgttaccttagctccagttagtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaataga |
210 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
22885539 |
tgatgttactttagctccaattagtgttggttttagtgataaaccaacacaacctttgttatcattgaccaaagatctttctccaatactcaacaataga |
22885440 |
T |
|
| Q |
211 |
atgtatgttggattctcatcttcaacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaa |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
22885439 |
atgtatgttggattctcatcttcaacagggttaattgtagcttctcattatattcttggttggagttttaaggttaatagccaagctcaaaaccttgaaa |
22885340 |
T |
|
| Q |
311 |
tctctgaccttcctg |
325 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
22885339 |
tctctgaacttcctg |
22885325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 33 - 324
Target Start/End: Complemental strand, 22875908 - 22875623
Alignment:
| Q |
33 |
tcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctccagtt |
132 |
Q |
| |
|
|||||||||| ||||||||||| ||||||| |||| ||||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||| | |
|
|
| T |
22875908 |
tcgattcagggatttatcccttttcagtggatatcccatgcaggtatggattgactatgatggagtgaaaaaaaagattgatgttactttagctccaata |
22875809 |
T |
|
| Q |
133 |
agtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatctt |
232 |
Q |
| |
|
|| | ||| ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22875808 |
gatgct------agtaataaaccaacacaacctttgttatcattgaccaaagatctttctccaattctcaacaatagaatgtatgttggattctcatctt |
22875715 |
T |
|
| Q |
233 |
caacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcct |
324 |
Q |
| |
|
||||||| || ||| ||||||||||||||||| |||||||||||||| ||||||||| |||||||||| ||||||||||||||| |||||| |
|
|
| T |
22875714 |
caacaggtttaattttagcttctcattatattcttggttggagttttaaggttaatggtcaagctcaaacccttgaaatctctgaacttcct |
22875623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 30 - 342
Target Start/End: Complemental strand, 22858457 - 22858142
Alignment:
| Q |
30 |
tggtcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctcca |
129 |
Q |
| |
|
||||||||||| | ||||||||| | |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
22858457 |
tggtcgattcaacgacttatccctttctagtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttacattagctcca |
22858358 |
T |
|
| Q |
130 |
gttagtgttggtttta---gtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattct |
226 |
Q |
| |
|
||| | |||||| || | ||||||| || ||| ||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
22858357 |
attaattttggttgtaatgttgttaaaccagcacgacctttgttatcattcacgaaagatctttctccaattctcaacaatagaatgtatgttggattct |
22858258 |
T |
|
| Q |
227 |
catcttcaacagggttcattgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcctgt |
326 |
Q |
| |
|
|||||||||| ||| | |||| |||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
22858257 |
catcttcaaccggggtaattgtagcttcccattatattcttggttggagttttaaggttaatggccaagctcaaaaccttgaaatctctaaacttcctga |
22858158 |
T |
|
| Q |
327 |
agtaagagtatttgct |
342 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
22858157 |
gctaagaatatttgct |
22858142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 51 - 315
Target Start/End: Complemental strand, 22805283 - 22805028
Alignment:
| Q |
51 |
ccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctccagttagtgttggttttagtcat |
150 |
Q |
| |
|
|||| |||||||| ||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| ||||| | |
|
|
| T |
22805283 |
cctttccagtggaaatcctatacaggtatggattgattatgatggagtgaagaaaaagattgatgttactttagctccagtttatgttgtt--------- |
22805193 |
T |
|
| Q |
151 |
aaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttcattgcag |
250 |
Q |
| |
|
||||||| | ||| |||||||| |||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22805192 |
aaaccaacaggaccttcgttatcaatgaccaaagatctttctccaattcttaacaatagtatgtatgttggattctcatcttcaacagggttacttgcag |
22805093 |
T |
|
| Q |
251 |
cttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctct |
315 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||| |
|
|
| T |
22805092 |
cttctcattatattcttggttggagttttaaggttaatggtcaagctcaaaaccttgtaatctct |
22805028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 65 - 325
Target Start/End: Complemental strand, 22809604 - 22809341
Alignment:
| Q |
65 |
atcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctccagttagtgttggttttagtcat---aaaccaagaca |
161 |
Q |
| |
|
|||||||||| |||||||||||||||||||| | ||||||| |||||||| ||| ||||||||| ||| ||||||||||| | | ||||||| || |
|
|
| T |
22809604 |
atcctatgcatgtatggattgaatatgatggtgaaaagaaaaagattgatgctactttagctccaattaatgttggttttaatgttgttaaaccaacacg |
22809505 |
T |
|
| Q |
162 |
accgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttcattgcagcttctcattat |
261 |
Q |
| |
|
||| ||||||||| |||||||||||||| |||||||| |||| ||| ||||||||||||||||||||||||||||| | ||| | ||||||||||| |
|
|
| T |
22809504 |
acctttgttatcattcaccaaagatctttctccaattcttaacactagtatgtatgttggattctcatcttcaacaggttctattctatcttctcattat |
22809405 |
T |
|
| Q |
262 |
attcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcctg |
325 |
Q |
| |
|
||| |||||||||||||| ||||||||| ||||||||||||||||| |||||| | ||||||| |
|
|
| T |
22809404 |
gttcttggttggagttttaaggttaatggtcaagctcaaaaccttgatatctctaaacttcctg |
22809341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 20 - 325
Target Start/End: Complemental strand, 22893949 - 22893653
Alignment:
| Q |
20 |
atgatgatactggtcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttac |
119 |
Q |
| |
|
|||||| || ||||| ||||| |||| || ||||| |||||| ||||||||||||||||||||||||||||||| | ||||||| |||||||||||| |
|
|
| T |
22893949 |
atgatggtaatggtcaattcaagaatataagccttatcagtggctatcctatgcaggtatggattgaatatgatggtgaaaagaaaaagattgatgttac |
22893850 |
T |
|
| Q |
120 |
cttagctccagttagtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgtt |
219 |
Q |
| |
|
||||||||| ||| ||||| |||||||| |||||| |||||||||||||||||||||||| |||||||| |||||||| ||||||||| |
|
|
| T |
22893849 |
tttagctccaattaatgttg---------ttaaaccaaaacaacctttgttatcattgaccaaagatctttctccaattcttaacaatagtatgtatgtt |
22893759 |
T |
|
| Q |
220 |
ggattctcatcttcaacagggttcattgc-agcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgac |
318 |
Q |
| |
|
||||| ||||| | || |||||||| | | ||||||||||||||| |||||||||||||| | ||||||| |||||||||||||||| ||||||||| |
|
|
| T |
22893758 |
ggattttcatcagctac-tggttcatttctaacttctcattatattcttggttggagttttaagattaatggtcaagctcaaaaccttgtaatctctgaa |
22893660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 85 - 324
Target Start/End: Complemental strand, 22913605 - 22913375
Alignment:
| Q |
85 |
gaatatgatggagtgaagaaaaggattgatgttaccttagctccagttagtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaag |
184 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| ||||||||| ||| ||||| | ||||||| |||||| ||||||||||| ||||| |
|
|
| T |
22913605 |
gaatatgatggagtgaagaaaaagattgatgttactttagctccaattaatgttgtt---------aaaccaaaacaacctttgttatcattgaacaaag |
22913515 |
T |
|
| Q |
185 |
atctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttcattgcagcttctcattatattcatggttggagttttatggt |
284 |
Q |
| |
|
||||||| ||||||| |||| ||| ||||||||||||||||||||||||||||| | ||| | ||||||||||||||| |||||||||||||| ||| |
|
|
| T |
22913514 |
atctttcttcaattcttaacactagtatgtatgttggattctcatcttcaacaggttcaattctaacttctcattatattcttggttggagttttaaggt |
22913415 |
T |
|
| Q |
285 |
taatggccaagctcaaaaccttgaaatctctgaccttcct |
324 |
Q |
| |
|
|||||| ||||||||||| |||| ||||||||| |||||| |
|
|
| T |
22913414 |
taatggtcaagctcaaaatcttgtaatctctgaacttcct |
22913375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 20 - 324
Target Start/End: Complemental strand, 22898268 - 22897973
Alignment:
| Q |
20 |
atgatgatactggtcgattcaggaatttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttac |
119 |
Q |
| |
|
|||||| || ||||| | ||| |||||| ||||| |||||| ||||||||||||||||||||||||||||||| | ||||||| |||||||||||| |
|
|
| T |
22898268 |
atgatgttaatggtcaactcaagaatttgacccttttcagtggcaatcctatgcaggtatggattgaatatgatggtgaaaagaaaaagattgatgttac |
22898169 |
T |
|
| Q |
120 |
cttagctccagttagtgttggttttagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgtt |
219 |
Q |
| |
|
||||||||| ||| ||||| | ||||||| |||||| ||| |||||||||| ||||||||| |||||| | |||||||| ||||||||| |
|
|
| T |
22898168 |
tttagctccaattaatgttgtt---------aaaccaaaacaacctttgttgtcattgaccagagatctttctccaattttaaacaatagtatgtatgtt |
22898078 |
T |
|
| Q |
220 |
ggattctcatcttcaacagggttca--ttgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctga |
317 |
Q |
| |
|
||||| ||||| | || || |||| || || ||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||| ||||||||| |
|
|
| T |
22898077 |
ggattttcatcagctactgg-ttcagttttca-cttctcattatattcttggttggagttttaaggttaatggtcaagctgaaaaccttgtaatctctga |
22897980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 65 - 324
Target Start/End: Complemental strand, 22826209 - 22825959
Alignment:
| Q |
65 |
atcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctccagttagtgttggttttagtcataaaccaagacaacc |
164 |
Q |
| |
|
||||||||||||||||||| ||||||||||| | || |||| |||||||||||| ||||||||| ||| ||||| |||||||| |||||| |
|
|
| T |
22826209 |
atcctatgcaggtatggatagaatatgatggtgaaaataaaaagattgatgttactttagctccaattaatgttg---------ttaaaccaaaacaacc |
22826119 |
T |
|
| Q |
165 |
gacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttca--ttgcagcttctcattata |
262 |
Q |
| |
|
||| |||||||||| ||||||| | |||||| | |||||||| |||||||||||||||||||| | || |||||| || || |||||||||||| |
|
|
| T |
22826118 |
tttgttttcattgaccagagatcttcctccaattttgaacaatagtatgtatgttggattctcatcagctac-tggttcagttttca-cttctcattata |
22826021 |
T |
|
| Q |
263 |
ttcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcct |
324 |
Q |
| |
|
||| |||||| ||||||| | ||||||| ||||||||||| |||| ||| ||||| |||||| |
|
|
| T |
22826020 |
ttcttggttgaagttttaagcttaatggtcaagctcaaaatcttgtaatttctgaacttcct |
22825959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 165; Significance: 4e-88; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 44 - 384
Target Start/End: Original strand, 21150733 - 21151073
Alignment:
| Q |
44 |
atttatcccttaccagtggacatcctatgcaggtatggattgaatatgatggagtgaagaaaaggattgatgttaccttagctccagttagtgttggttt |
143 |
Q |
| |
|
||||||||||| ||||||| |||||||||| |||||||||||||||||||| | ||||| | |||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
21150733 |
atttatcccttttcagtggatatcctatgcatgtatggattgaatatgatggtgaaaagaagaagattaatgttactttagctccaattagtgttggttt |
21150832 |
T |
|
| Q |
144 |
tagtcataaaccaagacaaccgacgttatcattgaccaaagatctttccccaattctcaacaatagaatgtatgttggattctcatcttcaacagggttc |
243 |
Q |
| |
|
|| | | |||||| | ||| |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
21150833 |
taataaaaaaccagcaagacctttgttatcattgaccaaagatctttctccagttctcaacaatagtatgtatgttggattctcatcttcaacagggtta |
21150932 |
T |
|
| Q |
244 |
attgcagcttctcattatattcatggttggagttttatggttaatggccaagctcaaaaccttgaaatctctgaccttcctgtagtaagagtatttgctg |
343 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||||||| ||| |
|
|
| T |
21150933 |
cttgcagcttctcattatattcttggttggagttttaaggttaatggcctggctcaaaaccttgaaatctctgaacttcctgaagtaacagtattttctg |
21151032 |
T |
|
| Q |
344 |
agnnnnnnnngtccaaatttttaactgttaggttgcctttg |
384 |
Q |
| |
|
|| ||||||||||||||| |||| ||||||||| |
|
|
| T |
21151033 |
agaaaaaaaaatccaaatttttaactattagtttgcctttg |
21151073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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