View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15148_high_34 (Length: 215)
Name: NF15148_high_34
Description: NF15148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15148_high_34 |
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| [»] scaffold0618 (1 HSPs) |
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Alignment Details
Target: scaffold0618 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0618
Description:
Target: scaffold0618; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6213 - 6143
Alignment:
| Q |
1 |
aataatatataattgttggtcatatggtttagactttagagttttataattgttatgatgtgttcggtgaa |
71 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6213 |
aataatatataattgttggtcatatggtttagactttagagttttataattgttatgatgtgttcggtgaa |
6143 |
T |
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Target: chr8 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44093698 - 44093768
Alignment:
| Q |
1 |
aataatatataattgttggtcatatggtttagactttagagttttataattgttatgatgtgttcggtgaa |
71 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44093698 |
aataatatataattgttggtcatatggtttagactttagagttttataattgttatgatgtgttcggtgaa |
44093768 |
T |
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