View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1514_low_6 (Length: 342)
Name: NF1514_low_6
Description: NF1514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1514_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 18 - 324
Target Start/End: Complemental strand, 33751655 - 33751349
Alignment:
| Q |
18 |
ttctcacataacaggacataagtataacttattggcatctcaaattttgcaagcataatatgcacctatttcactagtcctgatcttttacttctattgg |
117 |
Q |
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| T |
33751655 |
ttctcacataacaggacataagtataacttattggcatctcaaattttgcaagcataatatgcacctatttcactagtcctgatcttttacttctattgg |
33751556 |
T |
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| Q |
118 |
ataacaatatctgcctcaacttctgcttatctcagataattgtcaaagtattgaactcaattcatatacttgatttgatatacagtaggactgaaaaaac |
217 |
Q |
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| T |
33751555 |
ataacaatatctgcctcaacttctgcttatctcagataattgtcaaagtattgaactcaattcatatacttgatttgatatacagtaggactgaaaaaac |
33751456 |
T |
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| Q |
218 |
atcagagattatgtatataatgccaagagaaatcatcataaaaaacacctagaaattagagtgtacaaatgactctaacaaaacgaagaggatcatgacc |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33751455 |
atcagagattatgtatataatgccaagagaaatcatcataaaaaacacctagaaattagagtgtacaaatgactctaacaaaacgaagaggatcatgacc |
33751356 |
T |
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| Q |
318 |
aaatcct |
324 |
Q |
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| T |
33751355 |
aaatcct |
33751349 |
T |
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