View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15155_low_7 (Length: 220)

Name: NF15155_low_7
Description: NF15155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15155_low_7
NF15155_low_7
[»] chr6 (36 HSPs)
chr6 (11-170)||(10658240-10658398)
chr6 (65-137)||(10755193-10755264)
chr6 (65-136)||(12816812-12816882)
chr6 (75-141)||(9764297-9764362)
chr6 (184-220)||(2959032-2959068)
chr6 (184-220)||(8329611-8329647)
chr6 (184-220)||(8448195-8448231)
chr6 (184-220)||(8456999-8457035)
chr6 (184-220)||(16496705-16496741)
chr6 (184-220)||(31444343-31444379)
chr6 (184-220)||(34287224-34287260)
chr6 (74-136)||(6958738-6958798)
chr6 (65-136)||(21871195-21871265)
chr6 (65-136)||(35071339-35071409)
chr6 (184-218)||(4480513-4480547)
chr6 (65-107)||(6752917-6752959)
chr6 (65-107)||(23239352-23239394)
chr6 (184-218)||(29183697-29183731)
chr6 (65-107)||(32675828-32675870)
chr6 (65-126)||(2255839-2255899)
chr6 (183-216)||(5603504-5603537)
chr6 (184-217)||(11242653-11242686)
chr6 (184-220)||(735484-735520)
chr6 (184-220)||(1686287-1686323)
chr6 (184-220)||(1855045-1855081)
chr6 (184-220)||(2314652-2314688)
chr6 (184-220)||(2746488-2746524)
chr6 (184-220)||(5660438-5660474)
chr6 (184-220)||(9949204-9949240)
chr6 (184-216)||(10263128-10263160)
chr6 (184-220)||(17534576-17534612)
chr6 (184-216)||(18861824-18861856)
chr6 (75-135)||(20776469-20776528)
chr6 (184-220)||(31747039-31747075)
chr6 (184-220)||(32643781-32643817)
chr6 (184-220)||(35164660-35164696)
[»] chr5 (68 HSPs)
chr5 (75-136)||(13739344-13739404)
chr5 (65-132)||(29922104-29922170)
chr5 (184-220)||(28143285-28143321)
chr5 (184-220)||(29806606-29806642)
chr5 (72-136)||(35536956-35537019)
chr5 (65-136)||(35083344-35083414)
chr5 (75-137)||(12467383-12467444)
chr5 (75-136)||(2878587-2878648)
chr5 (184-220)||(1269572-1269608)
chr5 (184-220)||(4617819-4617855)
chr5 (184-220)||(6672280-6672316)
chr5 (184-220)||(14107291-14107327)
chr5 (184-220)||(16496639-16496675)
chr5 (184-220)||(17869177-17869213)
chr5 (184-220)||(18473953-18473989)
chr5 (184-220)||(21728700-21728736)
chr5 (184-220)||(23074697-23074733)
chr5 (184-220)||(23311226-23311262)
chr5 (65-136)||(29136735-29136807)
chr5 (184-220)||(34856620-34856656)
chr5 (184-220)||(34930264-34930300)
chr5 (184-220)||(36246047-36246083)
chr5 (184-220)||(36319555-36319591)
chr5 (184-220)||(36569318-36569354)
chr5 (184-220)||(36854211-36854247)
chr5 (184-220)||(39150979-39151015)
chr5 (184-220)||(42448250-42448286)
chr5 (65-136)||(6125391-6125461)
chr5 (65-136)||(6144843-6144912)
chr5 (77-136)||(10537137-10537195)
chr5 (81-136)||(25332302-25332356)
chr5 (65-136)||(40452388-40452458)
chr5 (65-136)||(40697111-40697181)
chr5 (65-136)||(41059700-41059770)
chr5 (65-136)||(41125779-41125849)
chr5 (184-218)||(5203590-5203624)
chr5 (184-218)||(9054026-9054060)
chr5 (186-220)||(10154215-10154249)
chr5 (75-125)||(16436282-16436332)
chr5 (65-107)||(28625585-28625627)
chr5 (184-218)||(29622244-29622278)
chr5 (65-98)||(7364257-7364290)
chr5 (183-220)||(10393555-10393592)
chr5 (184-217)||(11968815-11968848)
chr5 (183-220)||(12665133-12665170)
chr5 (65-126)||(15364106-15364165)
chr5 (183-216)||(24051441-24051474)
chr5 (183-220)||(36790368-36790405)
chr5 (75-136)||(42558628-42558688)
chr5 (184-216)||(1244238-1244270)
chr5 (84-136)||(1576754-1576806)
chr5 (84-136)||(1608009-1608061)
chr5 (184-220)||(1650330-1650366)
chr5 (184-220)||(4164998-4165034)
chr5 (184-220)||(6029651-6029687)
chr5 (184-220)||(16906376-16906412)
chr5 (82-134)||(17128378-17128430)
chr5 (184-220)||(24637993-24638029)
chr5 (184-220)||(25328357-25328393)
chr5 (184-220)||(27389980-27390016)
chr5 (184-216)||(29119645-29119677)
chr5 (184-220)||(33028269-33028305)
chr5 (184-220)||(33617135-33617171)
chr5 (184-220)||(38682967-38683003)
chr5 (184-220)||(39527971-39528007)
chr5 (192-220)||(40596003-40596031)
chr5 (184-220)||(42068580-42068616)
chr5 (184-220)||(43150211-43150247)
[»] chr7 (40 HSPs)
chr7 (65-136)||(29390462-29390532)
chr7 (76-136)||(29378761-29378820)
chr7 (75-126)||(7775346-7775396)
chr7 (183-220)||(19306750-19306787)
chr7 (184-220)||(1573894-1573930)
chr7 (184-220)||(4069169-4069205)
chr7 (184-220)||(4106593-4106629)
chr7 (184-220)||(5508724-5508760)
chr7 (184-220)||(6327250-6327286)
chr7 (184-220)||(8946467-8946503)
chr7 (184-220)||(17895673-17895709)
chr7 (184-220)||(19258463-19258499)
chr7 (184-220)||(21226104-21226140)
chr7 (184-220)||(27396367-27396403)
chr7 (184-220)||(35849334-35849370)
chr7 (184-220)||(40656161-40656197)
chr7 (184-220)||(47584724-47584760)
chr7 (184-220)||(48612556-48612592)
chr7 (65-136)||(33204939-33205009)
chr7 (65-107)||(44613412-44613454)
chr7 (75-108)||(32358724-32358757)
chr7 (75-136)||(34923048-34923108)
chr7 (65-98)||(37465834-37465867)
chr7 (183-220)||(40873224-40873261)
chr7 (184-220)||(1582669-1582705)
chr7 (184-220)||(1869855-1869891)
chr7 (184-216)||(3497574-3497606)
chr7 (75-135)||(6406779-6406838)
chr7 (184-220)||(7312506-7312542)
chr7 (184-220)||(10061069-10061105)
chr7 (184-220)||(16816730-16816766)
chr7 (184-216)||(23789470-23789502)
chr7 (184-220)||(31717336-31717372)
chr7 (184-220)||(33228739-33228775)
chr7 (184-220)||(34708713-34708749)
chr7 (184-220)||(35157137-35157173)
chr7 (184-216)||(37410759-37410791)
chr7 (184-220)||(40013303-40013339)
chr7 (184-220)||(43416340-43416376)
chr7 (184-220)||(46021484-46021520)
[»] chr2 (31 HSPs)
chr2 (65-136)||(37420011-37420081)
chr2 (184-220)||(38490453-38490489)
chr2 (65-107)||(21788562-21788604)
chr2 (184-220)||(12236160-12236196)
chr2 (184-220)||(32023291-32023327)
chr2 (184-220)||(35476543-35476579)
chr2 (64-136)||(36501426-36501497)
chr2 (184-220)||(39070058-39070094)
chr2 (184-220)||(42007268-42007304)
chr2 (184-220)||(42414544-42414580)
chr2 (184-220)||(43461387-43461423)
chr2 (65-136)||(8832562-8832632)
chr2 (184-218)||(33607082-33607116)
chr2 (75-136)||(5903653-5903713)
chr2 (75-136)||(5903730-5903790)
chr2 (65-98)||(42064956-42064989)
chr2 (64-112)||(1120389-1120437)
chr2 (184-220)||(3048581-3048617)
chr2 (184-220)||(6731581-6731617)
chr2 (184-220)||(7975067-7975103)
chr2 (184-220)||(8532145-8532181)
chr2 (184-220)||(10392684-10392720)
chr2 (184-220)||(15897253-15897289)
chr2 (184-220)||(17882753-17882789)
chr2 (184-220)||(20251538-20251574)
chr2 (184-220)||(23080151-23080187)
chr2 (184-220)||(24381284-24381320)
chr2 (184-220)||(28855467-28855503)
chr2 (184-220)||(34481724-34481760)
chr2 (184-220)||(36754794-36754830)
chr2 (184-220)||(44948058-44948094)
[»] chr8 (42 HSPs)
chr8 (184-220)||(24655013-24655049)
chr8 (65-132)||(32975792-32975858)
chr8 (65-136)||(34286475-34286545)
chr8 (183-220)||(23681048-23681085)
chr8 (184-220)||(2733655-2733691)
chr8 (184-220)||(6436722-6436758)
chr8 (184-220)||(8525254-8525290)
chr8 (184-220)||(8569984-8570020)
chr8 (184-220)||(9569763-9569799)
chr8 (184-220)||(10617824-10617860)
chr8 (184-220)||(19649551-19649587)
chr8 (184-220)||(24242638-24242674)
chr8 (184-220)||(25063379-25063415)
chr8 (184-220)||(25250824-25250860)
chr8 (184-220)||(36055508-36055544)
chr8 (184-220)||(37295165-37295201)
chr8 (65-136)||(28879160-28879230)
chr8 (184-218)||(10096651-10096685)
chr8 (83-136)||(2563326-2563378)
chr8 (65-98)||(16972304-16972337)
chr8 (72-105)||(18217219-18217252)
chr8 (75-136)||(24087286-24087346)
chr8 (184-220)||(403705-403741)
chr8 (184-220)||(4312172-4312208)
chr8 (184-220)||(4430788-4430824)
chr8 (184-220)||(6317339-6317375)
chr8 (184-220)||(6845036-6845072)
chr8 (184-220)||(14188129-14188165)
chr8 (184-220)||(16501688-16501724)
chr8 (184-220)||(17919868-17919904)
chr8 (184-220)||(25893890-25893926)
chr8 (184-220)||(26226765-26226801)
chr8 (184-216)||(26690733-26690765)
chr8 (184-220)||(26738010-26738046)
chr8 (184-220)||(27928197-27928233)
chr8 (184-220)||(31639155-31639191)
chr8 (184-220)||(34711608-34711644)
chr8 (184-220)||(36586521-36586557)
chr8 (184-220)||(38953533-38953569)
chr8 (184-220)||(40772618-40772654)
chr8 (184-220)||(43820907-43820943)
chr8 (184-220)||(44814902-44814938)
[»] chr1 (37 HSPs)
chr1 (184-220)||(9705566-9705602)
chr1 (65-136)||(26988253-26988323)
chr1 (78-136)||(1321656-1321714)
chr1 (184-218)||(32880634-32880668)
chr1 (75-136)||(37329323-37329383)
chr1 (75-136)||(47413487-47413547)
chr1 (184-220)||(270374-270410)
chr1 (184-220)||(10635528-10635564)
chr1 (184-220)||(19338231-19338267)
chr1 (184-220)||(20164126-20164162)
chr1 (184-220)||(29005129-29005165)
chr1 (184-220)||(43676077-43676113)
chr1 (68-108)||(46500938-46500978)
chr1 (65-136)||(4068220-4068290)
chr1 (75-138)||(41130109-41130171)
chr1 (65-136)||(48819404-48819474)
chr1 (75-136)||(994623-994685)
chr1 (65-107)||(9572723-9572765)
chr1 (66-136)||(28690110-28690179)
chr1 (184-218)||(39606444-39606478)
chr1 (183-220)||(13555777-13555814)
chr1 (66-107)||(28122724-28122765)
chr1 (184-216)||(10430396-10430428)
chr1 (184-220)||(13018112-13018148)
chr1 (184-220)||(17068191-17068227)
chr1 (184-220)||(18089821-18089857)
chr1 (75-107)||(19220288-19220320)
chr1 (184-220)||(21522356-21522392)
chr1 (184-220)||(23225343-23225379)
chr1 (184-216)||(25821007-25821039)
chr1 (184-220)||(27078587-27078623)
chr1 (184-220)||(40958627-40958663)
chr1 (184-220)||(43086524-43086560)
chr1 (184-220)||(48314206-48314242)
chr1 (184-220)||(48391995-48392031)
chr1 (184-220)||(48731809-48731845)
chr1 (184-220)||(52492734-52492770)
[»] chr4 (50 HSPs)
chr4 (65-136)||(34526248-34526318)
chr4 (65-108)||(48721925-48721968)
chr4 (75-136)||(29877607-29877667)
chr4 (184-220)||(7512806-7512842)
chr4 (184-220)||(12821204-12821240)
chr4 (65-133)||(24031185-24031253)
chr4 (184-220)||(35828313-35828349)
chr4 (184-220)||(36526194-36526230)
chr4 (184-220)||(47462089-47462125)
chr4 (76-136)||(48591335-48591394)
chr4 (72-107)||(897082-897117)
chr4 (185-220)||(3848871-3848906)
chr4 (73-136)||(29996695-29996757)
chr4 (65-136)||(36741009-36741079)
chr4 (65-136)||(42611779-42611850)
chr4 (65-107)||(11256600-11256642)
chr4 (65-107)||(18630834-18630876)
chr4 (184-218)||(37050740-37050774)
chr4 (75-136)||(3564321-3564381)
chr4 (75-136)||(9201619-9201679)
chr4 (75-136)||(12495555-12495615)
chr4 (75-136)||(23297406-23297466)
chr4 (75-136)||(27368062-27368123)
chr4 (184-217)||(28033231-28033264)
chr4 (75-136)||(28074479-28074539)
chr4 (75-136)||(28663687-28663747)
chr4 (183-220)||(31263554-31263591)
chr4 (183-220)||(31375151-31375188)
chr4 (75-136)||(43699541-43699601)
chr4 (191-220)||(48628517-48628546)
chr4 (184-216)||(1033506-1033538)
chr4 (184-220)||(5396993-5397029)
chr4 (184-220)||(7944277-7944313)
chr4 (184-220)||(14285134-14285170)
chr4 (75-135)||(18258119-18258178)
chr4 (184-220)||(21378327-21378363)
chr4 (184-220)||(25586380-25586416)
chr4 (184-220)||(30044637-30044673)
chr4 (184-220)||(31435971-31436007)
chr4 (184-220)||(34684241-34684277)
chr4 (184-220)||(36860902-36860938)
chr4 (65-136)||(38345734-38345803)
chr4 (184-220)||(39284628-39284664)
chr4 (64-136)||(42153073-42153144)
chr4 (184-220)||(42154191-42154227)
chr4 (184-220)||(42412041-42412077)
chr4 (184-220)||(46552964-46553000)
chr4 (184-216)||(49319770-49319802)
chr4 (184-220)||(49882762-49882798)
chr4 (184-220)||(50779844-50779880)
[»] scaffold0778 (1 HSPs)
scaffold0778 (184-220)||(857-893)
[»] scaffold0595 (1 HSPs)
scaffold0595 (184-220)||(384-420)
[»] scaffold0432 (1 HSPs)
scaffold0432 (184-220)||(9406-9442)
[»] scaffold0402 (1 HSPs)
scaffold0402 (184-220)||(1294-1330)
[»] scaffold0179 (1 HSPs)
scaffold0179 (188-220)||(4068-4100)
[»] scaffold0024 (1 HSPs)
scaffold0024 (184-220)||(160487-160523)
[»] scaffold0008 (1 HSPs)
scaffold0008 (184-220)||(39366-39402)
[»] chr3 (48 HSPs)
chr3 (184-220)||(3440765-3440801)
chr3 (184-220)||(4232230-4232266)
chr3 (184-220)||(4833162-4833198)
chr3 (184-220)||(4976761-4976797)
chr3 (184-220)||(8381118-8381154)
chr3 (184-220)||(8507971-8508007)
chr3 (184-220)||(9493537-9493573)
chr3 (184-220)||(9609971-9610007)
chr3 (184-220)||(10473967-10474003)
chr3 (184-220)||(13525208-13525244)
chr3 (184-220)||(24650600-24650636)
chr3 (184-220)||(29212118-29212154)
chr3 (184-220)||(35069352-35069388)
chr3 (184-220)||(40840208-40840244)
chr3 (184-220)||(43605629-43605665)
chr3 (184-220)||(47069046-47069082)
chr3 (184-220)||(53669764-53669800)
chr3 (184-219)||(28171033-28171068)
chr3 (65-136)||(40240489-40240558)
chr3 (77-131)||(47520430-47520483)
chr3 (183-220)||(1242255-1242292)
chr3 (183-220)||(2789031-2789068)
chr3 (75-136)||(21296734-21296794)
chr3 (75-136)||(29002829-29002889)
chr3 (184-220)||(2096638-2096674)
chr3 (65-136)||(3876174-3876244)
chr3 (184-220)||(3917805-3917841)
chr3 (184-220)||(6583288-6583324)
chr3 (184-220)||(8128343-8128379)
chr3 (184-220)||(8792782-8792818)
chr3 (184-220)||(11312629-11312665)
chr3 (184-220)||(11751251-11751287)
chr3 (184-220)||(24250764-24250800)
chr3 (184-220)||(25118759-25118795)
chr3 (184-216)||(27396893-27396925)
chr3 (184-220)||(28197037-28197073)
chr3 (65-125)||(31787627-31787686)
chr3 (184-220)||(32961031-32961067)
chr3 (184-220)||(35240069-35240105)
chr3 (184-220)||(35359756-35359792)
chr3 (65-136)||(35480313-35480382)
chr3 (75-107)||(36266346-36266378)
chr3 (184-220)||(38127895-38127931)
chr3 (184-220)||(42296750-42296786)
chr3 (76-136)||(43079845-43079904)
chr3 (184-220)||(43898016-43898052)
chr3 (184-220)||(52256805-52256841)
chr3 (184-220)||(54097493-54097529)
[»] scaffold1367 (1 HSPs)
scaffold1367 (72-107)||(1170-1205)
[»] scaffold0157 (1 HSPs)
scaffold0157 (75-136)||(24862-24922)
[»] scaffold0041 (1 HSPs)
scaffold0041 (183-220)||(93021-93058)
[»] scaffold0882 (1 HSPs)
scaffold0882 (184-216)||(3754-3786)
[»] scaffold0515 (1 HSPs)
scaffold0515 (184-220)||(2517-2553)
[»] scaffold0306 (1 HSPs)
scaffold0306 (184-220)||(2517-2553)
[»] scaffold0287 (1 HSPs)
scaffold0287 (184-216)||(1115-1147)
[»] scaffold0014 (1 HSPs)
scaffold0014 (184-220)||(195780-195816)


Alignment Details
Target: chr6 (Bit Score: 132; Significance: 1e-68; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 10658240 - 10658398
Alignment:
Q  11 caaaggccaaaatgattgtttaccaaaagggataatctatacctataaataaacatgaatcaatataaaagcttatttatttgcataaattattttttca 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||    
T  10658240 caaaggccaaaatgattgtttaccaaaagggataatctatacctataaataaacatgaattaatataaaagcttatttatttgcattaatta-tttttca 10658338  T
Q  111 taaactcgaaaataagacaatccaaaaacggaaagacaggcacgttagcgtctgtgttta 170  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  10658339 taaactcaaaaataagacaattcaaaaacggaaagacgggcacgttagcgtctgtgttta 10658398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 10755264 - 10755193
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaaa 137  Q
    |||||| || ||||||||||||||||||||||||| || ||||||| || ||| |||||||| ||||||||||    
T  10755264 atgaattaacataaaagcttatttatttgcataaacta-tttttcagaagctcaaaaataagtcaatccaaaa 10755193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 12816882 - 12816812
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||||||||||||||||||| || |||||||||| ||| ||||||||  ||||||||    
T  12816882 atgaattaacataaaagcttatttatttgcataaacta-tttttcataagctcaaaaataagttaatccaaa 12816812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 9764362 - 9764297
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaaaacgg 141  Q
    ||||||||||||||||||||||||||||| |||||||||  || |||||||| |||| |||| ||||    
T  9764362 ataaaagcttatttatttgcataaattat-ttttcataagttcaaaaataagtcaatgcaaacacgg 9764297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 2959032 - 2959068
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  2959032 ttaggccggatgccatgaccggggttcgaaccccggt 2959068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 8329647 - 8329611
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  8329647 ttaggccggatgccatgaccggggttcgaaccccggt 8329611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 8448231 - 8448195
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  8448231 ttaggccggatgccatgaccggggttcgaaccccggt 8448195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 8457035 - 8456999
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  8457035 ttaggccggatgccatgaccggggttcgaaccccggt 8456999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 16496741 - 16496705
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  16496741 ttaggccggatgccatgaccggggttcgaaccccggt 16496705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 31444379 - 31444343
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||| |||||||||||||||||||||||||||    
T  31444379 ttaggccgggtgccatgactggggttcgaaccccggt 31444343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 34287260 - 34287224
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  34287260 ttaggccggatgccatgaccggggttcgaaccccggt 34287224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 6958738 - 6958798
Alignment:
Q  74 tataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||||||||||||| |||||||  ||||||  ||||||||  ||||||||||||||||||    
T  6958738 tataaaagcttatttatgtgcataagctatttt--cataaactaaaaaataagacaatccaaa 6958798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 21871265 - 21871195
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||||| |||||| |||||||||||| ||||| || |||||||||| ||  |||||||| |||||||||    
T  21871265 atgaatcaacataaaaacttatttatttgtataaacta-tttttcataagctaaaaaataagtcaatccaaa 21871195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 35071409 - 35071339
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||||||||||||||||||  || |||||||||| ||  |||||||| |||||||||    
T  35071409 atgaattaacataaaagcttatttatttgcataagcta-tttttcataagctaaaaaataagccaatccaaa 35071339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 4480513 - 4480547
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccg 218  Q
    |||||||||||||||||| ||||||||||||||||    
T  4480513 ttaggccggatgccatgattggggttcgaaccccg 4480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Original strand, 6752917 - 6752959
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttt 107  Q
    |||||| |||||||||||||||||||||||||||  |||||||    
T  6752917 atgaattaatataaaagcttatttatttgcataagctattttt 6752959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Original strand, 23239352 - 23239394
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttt 107  Q
    |||||| |||||||||||||||||||||||||||  |||||||    
T  23239352 atgaattaatataaaagcttatttatttgcataagctattttt 23239394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 29183697 - 29183731
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccg 218  Q
    ||||||||||||||||||| |||||||||||||||    
T  29183697 ttaggccggatgccatgaccggggttcgaaccccg 29183731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 32675870 - 32675828
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttt 107  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||    
T  32675870 atgaattaatataaaaacttatttatttgcataagttattttt 32675828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 2255839 - 2255899
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataag 126  Q
    |||||| || |||||||||||||||||| ||||| ||||||||| |||| ||| ||||||||    
T  2255839 atgaattaacataaaagcttatttatttacataagttatttttttataagctc-aaaataag 2255899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 5603537 - 5603504
Alignment:
Q  183 attaggccggatgccatgactggggttcgaaccc 216  Q
    |||||||||||||||||||| |||||||||||||    
T  5603537 attaggccggatgccatgaccggggttcgaaccc 5603504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 11242686 - 11242653
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaacccc 217  Q
    ||||| ||||||||||||||||||||||||||||    
T  11242686 ttaggacggatgccatgactggggttcgaacccc 11242653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 735484 - 735520
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  735484 ttaggccggatgccatgatcggggttcgaaccccggt 735520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 1686323 - 1686287
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  1686323 ttaggccggatgccatgatcggggttcgaaccccggt 1686287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 1855045 - 1855081
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  1855045 ttaggccggatgccatgatcggggttcgaaccccggt 1855081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 2314688 - 2314652
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  2314688 ttaggccggatgtcatgaccggggttcgaaccccggt 2314652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 2746488 - 2746524
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  2746488 ttaggccggatgtcatgacaggggttcgaaccccggt 2746524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 5660438 - 5660474
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  5660438 ttaggccggatgccatgatcggggttcgaaccccggt 5660474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 9949240 - 9949204
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  9949240 ttaggccggatgccatgatcggggttcgaaccccggt 9949204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 10263160 - 10263128
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    ||||||||||||||||||| |||||||||||||    
T  10263160 ttaggccggatgccatgaccggggttcgaaccc 10263128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 17534612 - 17534576
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  17534612 ttaggccggatgtcatgaccggggttcgaaccccggt 17534576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 18861856 - 18861824
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    ||||||||||||||||||| |||||||||||||    
T  18861856 ttaggccggatgccatgaccggggttcgaaccc 18861824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 20776469 - 20776528
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaa 135  Q
    ||||||| |||||||||||||||| ||| |||||||||  ||| |||||||| ||||||||    
T  20776469 ataaaagtttatttatttgcataagtta-tttttcatatgctcaaaaataagccaatccaa 20776528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 31747075 - 31747039
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  31747075 ttaggccggatgccatgatcggggttcgaaccccggt 31747039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 32643817 - 32643781
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  32643817 ttaggccggatgccatgaccggggttcgaatcccggt 32643781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 35164696 - 35164660
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  35164696 ttaggccggatgccatgaccggggttcgaacaccggt 35164660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 13739344 - 13739404
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||||    
T  13739344 ataaaagcttatttatttgcataagtta-tttttcataaactcaaaaataagccaatccaaa 13739404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 29922170 - 29922104
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatc 132  Q
    |||||| |||||||||||||||||||||||||||  || |||||||||||||| |||||||| |||||    
T  29922170 atgaattaatataaaagcttatttatttgcataagcta-tttttcataaactcaaaaataagccaatc 29922104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 28143321 - 28143285
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||||||||||||||||||||    
T  28143321 ttaggccggatgccatgactggggttcgaaccccggt 28143285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 29806606 - 29806642
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||||||||||||||||||||    
T  29806606 ttaggccggatgccatgactggggttcgaaccccggt 29806642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 35536956 - 35537019
Alignment:
Q  72 aatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||||||||||||||||||||||||  || |||||||||| ||| |||||||| |||||||||    
T  35536956 aatataaaagcttatttatttgcataagcta-tttttcataatctcaaaaataagtcaatccaaa 35537019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 35083344 - 35083414
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||||||||||||||||||| || ||| |||||||||| |||||||  |||||||||    
T  35083344 atgaattaacataaaagcttatttatttgcataaacta-tttatcataaactcaaaaataaaccaatccaaa 35083414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 12467383 - 12467444
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaaa 137  Q
    |||||||||||||||||||||||| ||| |||||||||| ||  |||||||| ||||||||||    
T  12467383 ataaaagcttatttatttgcataagtta-tttttcataacctaaaaaataagccaatccaaaa 12467444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 2878648 - 2878587
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||||||||||||||| |||||  ||||||||||||| ||  |||||||| |||||||||    
T  2878648 ataaaagcttatttatttacataagctattttttcataagctaaaaaataagccaatccaaa 2878587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 1269608 - 1269572
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||| ||||||||||||||||||    
T  1269608 ttaggccggatgccatgattggggttcgaaccccggt 1269572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 4617855 - 4617819
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  4617855 ttaggccggatgccatgaccggggttcgaaccccggt 4617819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 6672280 - 6672316
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  6672280 ttaggccggatgccatgaccggggttcgaaccccggt 6672316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 14107291 - 14107327
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  14107291 ttaggccggatgccatgaccggggttcgaaccccggt 14107327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 16496639 - 16496675
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  16496639 ttaggccggatgccatgaccggggttcgaaccccggt 16496675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 17869213 - 17869177
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  17869213 ttaggccggatgccatgaccggggttcgaaccccggt 17869177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 18473953 - 18473989
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  18473953 ttaggccggatgccatgaccggggttcgaaccccggt 18473989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 21728700 - 21728736
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  21728700 ttaggccggatgccatgaccggggttcgaaccccggt 21728736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 23074733 - 23074697
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  23074733 ttaggccggatgccatgaccggggttcgaaccccggt 23074697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 23311262 - 23311226
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  23311262 ttaggccggatgccatgaccggggttcgaaccccggt 23311226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 29136807 - 29136735
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaatta-ttttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||||||||||||||||||| || |||||| |||| ||  |||||||| |||||||||    
T  29136807 atgaattaacataaaagcttatttatttgcataaactattttttttataagctgaaaaataagtcaatccaaa 29136735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 34856620 - 34856656
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  34856620 ttaggccggatgccatgaccggggttcgaaccccggt 34856656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 34930264 - 34930300
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  34930264 ttaggccggatgccatgaccggggttcgaaccccggt 34930300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 36246083 - 36246047
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  36246083 ttaggccggatgccatgaccggggttcgaaccccggt 36246047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 36319591 - 36319555
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  36319591 ttaggccggatgccatgacaggggttcgaaccccggt 36319555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 36569318 - 36569354
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  36569318 ttaggccggatgccatgaccggggttcgaaccccggt 36569354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 36854247 - 36854211
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  36854247 ttaggccggatgccatgaccggggttcgaaccccggt 36854211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 39151015 - 39150979
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  39151015 ttaggccggatgccatgaccggggttcgaaccccggt 39150979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 42448250 - 42448286
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  42448250 ttaggccggatgccatgaccggggttcgaaccccggt 42448286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 6125391 - 6125461
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| |||||||||||||||||||||||||||  || ||||||||||  || |||| ||| |||||||||    
T  6125391 atgaattaatataaaagcttatttatttgcataagcta-tttttcataagttcaaaaagaagtcaatccaaa 6125461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 6144843 - 6144912
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| ||||||||||||| |||||||||||||| || |||||||||| ||| ||||||||  ||||||||    
T  6144843 atgaattaatataaaagcttgtttatttgcataaacta-tttttcataagctc-aaaataagtaaatccaaa 6144912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 10537195 - 10537137
Alignment:
Q  77 aaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||||||| |||||||||||  ||||||| ||||||||| |||||||| |||||||||    
T  10537195 aaaagcttatatatttgcataagctattttt-cataaactcaaaaataagccaatccaaa 10537137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 25332302 - 25332356
Alignment:
Q  81 gcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||||||||||||||  ||||||  ||||||||| ||||||||||||||||||    
T  25332302 gcttatttatttgcataagctatttta-cataaactctaaaataagacaatccaaa 25332356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 40452458 - 40452388
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || |||| |||||||||||||||||||  || |||||||||| ||| |||||||| |||||||||    
T  40452458 atgaataaacataatagcttatttatttgcataagcta-tttttcataagctcaaaaataagccaatccaaa 40452388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 40697111 - 40697181
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||||||||||||| ||||  || |||||||||| ||| |||||||| |||||||||    
T  40697111 atgaattaacataaaagcttatttatttgtataagcta-tttttcataagctcaaaaataagccaatccaaa 40697181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 41059770 - 41059700
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||||||||||||||||||| |  |||||||||| ||| |||||||| | |||||||    
T  41059770 atgaattaacataaaagcttatttatttgcataaact-gtttttcataagctcaaaaataagcccatccaaa 41059700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 41125779 - 41125849
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || |||||||||||| |||||||| ||  |||||| |||||||||| |||||||| |||||||||    
T  41125779 atgaattaacataaaagcttatatatttgcaaaagctatttt-tcataaactcaaaaataagccaatccaaa 41125849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 5203590 - 5203624
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccg 218  Q
    ||||||||||||||||||| |||||||||||||||    
T  5203590 ttaggccggatgccatgaccggggttcgaaccccg 5203624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 9054060 - 9054026
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccg 218  Q
    ||||||||||||||||||| |||||||||||||||    
T  9054060 ttaggccggatgccatgaccggggttcgaaccccg 9054026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 10154249 - 10154215
Alignment:
Q  186 aggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||| |||||||||||||||||    
T  10154249 aggccggatgccatgaccggggttcgaaccccggt 10154215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 16436332 - 16436282
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataa 125  Q
    ||||||| ||| ||||||||||||||||| ||| ||||||||| |||||||    
T  16436332 ataaaagtttagttatttgcataaattatatttgcataaactcaaaaataa 16436282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Original strand, 28625585 - 28625627
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttt 107  Q
    |||||| || |||||||||||||||||||||||| ||||||||    
T  28625585 atgaattaacataaaagcttatttatttgcataagttattttt 28625627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 29622244 - 29622278
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccg 218  Q
    ||||||||||||||||||| |||||||||||||||    
T  29622244 ttaggccggatgccatgaccggggttcgaaccccg 29622278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 7364290 - 7364257
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataa 98  Q
    |||||| |||||||||||||||||||||||||||    
T  7364290 atgaattaatataaaagcttatttatttgcataa 7364257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 10393592 - 10393555
Alignment:
Q  183 attaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  10393592 attaggccggatgccttgaccggggttcgaaccccggt 10393555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 11968815 - 11968848
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaacccc 217  Q
    ||||||||||||||||||| ||||||||||||||    
T  11968815 ttaggccggatgccatgaccggggttcgaacccc 11968848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 12665133 - 12665170
Alignment:
Q  183 attaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  12665133 attaggccggatgccatgaccggggttcgaactccggt 12665170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 15364106 - 15364165
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataag 126  Q
    |||||| || |||||||||||||||||||||||| || |||||| |||||||| ||||||||    
T  15364106 atgaattaacataaaagcttatttatttgcataagttctttttt-ataaactc-aaaataag 15364165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 24051441 - 24051474
Alignment:
Q  183 attaggccggatgccatgactggggttcgaaccc 216  Q
    |||||||||||||||||||| |||||||||||||    
T  24051441 attaggccggatgccatgaccggggttcgaaccc 24051474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 36790405 - 36790368
Alignment:
Q  183 attaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  36790405 attaggccggatgctatgaccggggttcgaaccccggt 36790368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 42558688 - 42558628
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||||||||||||||||||||  || |||||||||| ||| |||||||| |||| ||||    
T  42558688 ataaaagcttatttatttgcataagcta-tttttcataagctcaaaaataagccaattcaaa 42558628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 1244270 - 1244238
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    ||||||||||||||||||| |||||||||||||    
T  1244270 ttaggccggatgccatgaccggggttcgaaccc 1244238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 1576754 - 1576806
Alignment:
Q  84 tatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||||||||||||  || |||||||||| ||| |||||||| |||||||||    
T  1576754 tatttatttgcataagctaatttttcataagctcaaaaataagccaatccaaa 1576806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 1608061 - 1608009
Alignment:
Q  84 tatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||||||||||||  || |||||||||| ||| |||||||| |||||||||    
T  1608061 tatttatttgcataagctaatttttcataagctcaaaaataagccaatccaaa 1608009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 1650330 - 1650366
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  1650330 ttaggccggatgccatgaccggggttcgaactccggt 1650366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 4164998 - 4165034
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  4164998 ttaggccggatgtcatgaccggggttcgaaccccggt 4165034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 6029651 - 6029687
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||| |||||||||||||||||||    
T  6029651 ttaggccggatgtcatgcctggggttcgaaccccggt 6029687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 16906376 - 16906412
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  16906376 ttaggccggatgccatgatcggggttcgaaccccggt 16906412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 17128378 - 17128430
Alignment:
Q  82 cttatttatttgcataaattattttttcataaactcgaaaataagacaatcca 134  Q
    ||||||| ||| |||||| ||||||||||||| ||| |||||||| |||||||    
T  17128378 cttatttctttacataaactattttttcataagctcaaaaataagtcaatcca 17128430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 24637993 - 24638029
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  24637993 ttaggccggatgtcatgattggggttcgaaccccggt 24638029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 25328393 - 25328357
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| | |||||||||||||||    
T  25328393 ttaggccggatgccatgaccgaggttcgaaccccggt 25328357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 27390016 - 27389980
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  27390016 ttaggccggatgccatgaccggggttcgaacctcggt 27389980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 29119645 - 29119677
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    ||||||||||||||||||| |||||||||||||    
T  29119645 ttaggccggatgccatgaccggggttcgaaccc 29119677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 33028269 - 33028305
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  33028269 ttaggccggatgtcatgaccggggttcgaaccccggt 33028305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 33617135 - 33617171
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  33617135 ttaggccggatgctatgattggggttcgaaccccggt 33617171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 38682967 - 38683003
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||| |||||||||||| |||||||||||||||||    
T  38682967 ttaggctggatgccatgaccggggttcgaaccccggt 38683003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 39527971 - 39528007
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||| |||||||||||| |||||||||||||||||    
T  39527971 ttaggctggatgccatgaccggggttcgaaccccggt 39528007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Original strand, 40596003 - 40596031
Alignment:
Q  192 gatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||||||||||||    
T  40596003 gatgccatgactggggttcgaaccccggt 40596031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 42068580 - 42068616
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||| |||||||||||| |||||||||||||||||    
T  42068580 ttaggctggatgccatgaccggggttcgaaccccggt 42068616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 43150247 - 43150211
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  43150247 ttaggccggatgctatgattggggttcgaaccccggt 43150211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 29390532 - 29390462
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||||||||||||||||||| || |||||||||| ||| |||||||| |||||||||    
T  29390532 atgaattaacataaaagcttatttatttgcataaacta-tttttcataagctcaaaaataagtcaatccaaa 29390462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 29378761 - 29378820
Alignment:
Q  76 taaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||||||||||||||||||||  |||||| |||||||||| |||||||| |||||||||    
T  29378761 taaaagcttatttatttgcataagctatttt-tcataaactcaaaaataagtcaatccaaa 29378820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 7775346 - 7775396
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataag 126  Q
    |||||||||||||||||||||||||||||||| | |||||||| ||||||||    
T  7775346 ataaaagcttatttatttgcataaattattttat-ataaactctaaaataag 7775396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 19306750 - 19306787
Alignment:
Q  183 attaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||| |||||||||||||||||    
T  19306750 attaggccggatgccatgaccggggttcgaaccccggt 19306787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 1573930 - 1573894
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  1573930 ttaggccggatgccatgaccggggttcgaaccccggt 1573894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 4069205 - 4069169
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  4069205 ttaggccggatgccatgaccggggttcgaaccccggt 4069169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 4106593 - 4106629
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  4106593 ttaggccggatgccatgaccggggttcgaaccccggt 4106629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 5508724 - 5508760
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5508724 ttaggccggatgccatgaccggggttcgaaccccggt 5508760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 6327250 - 6327286
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  6327250 ttaggccggatgccatgaccggggttcgaaccccggt 6327286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 8946467 - 8946503
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  8946467 ttaggccggatgccatgaccggggttcgaaccccggt 8946503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 17895673 - 17895709
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  17895673 ttaggccggatgccatgaccggggttcgaaccccggt 17895709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 19258463 - 19258499
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  19258463 ttaggccggatgccatgaccggggttcgaaccccggt 19258499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 21226104 - 21226140
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  21226104 ttaggccggatgccatgaccggggttcgaaccccggt 21226140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 27396403 - 27396367
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||| ||||||||||||||||||    
T  27396403 ttaggccggatgccatgattggggttcgaaccccggt 27396367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 35849334 - 35849370
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  35849334 ttaggccggatgccatgaccggggttcgaaccccggt 35849370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 40656197 - 40656161
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  40656197 ttaggccggatgccatgaccggggttcgaaccccggt 40656161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 47584760 - 47584724
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  47584760 ttaggccggatgccatgaccggggttcgaaccccggt 47584724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 48612556 - 48612592
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  48612556 ttaggccggatgccatgaccggggttcgaaccccggt 48612592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 33204939 - 33205009
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||||||||||||||||||  || |||||||||| ||  |||||||| |||||||||    
T  33204939 atgaattaacataaaagcttatttatttgcataagata-tttttcataagctaaaaaataagccaatccaaa 33205009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 44613454 - 44613412
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttt 107  Q
    |||||| |||||||||||||||||||||||||||  |||||||    
T  44613454 atgaattaatataaaagcttatttatttgcataagctattttt 44613412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 32358724 - 32358757
Alignment:
Q  75 ataaaagcttatttatttgcataaattatttttt 108  Q
    ||||||||||||||| ||||||||||||||||||    
T  32358724 ataaaagcttatttacttgcataaattatttttt 32358757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 34923048 - 34923108
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||||||||||||||||||||  |||||||| |||| ||| |||||||| |||| ||||    
T  34923048 ataaaagcttatttatttgcataagctatttttt-ataagctcaaaaataagccaattcaaa 34923108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 37465867 - 37465834
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataa 98  Q
    |||||| |||||||||||||||||||||||||||    
T  37465867 atgaattaatataaaagcttatttatttgcataa 37465834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 40873224 - 40873261
Alignment:
Q  183 attaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  40873224 attaggctggatgccatgaccggggttcgaaccccggt 40873261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 1582705 - 1582669
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  1582705 ttaggccggatgctatgaccggggttcgaaccccggt 1582669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 1869855 - 1869891
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  1869855 ttaggccggatgccatgaccggggttcgaactccggt 1869891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 3497606 - 3497574
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    ||||||||||||||||||| |||||||||||||    
T  3497606 ttaggccggatgccatgaccggggttcgaaccc 3497574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 6406838 - 6406779
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaa 135  Q
    |||||| |||||||||||| |||| ||| |||||||||| ||| |||||||| ||||||||    
T  6406838 ataaaatcttatttatttgtataagtta-tttttcataagctcaaaaataagtcaatccaa 6406779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 7312542 - 7312506
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  7312542 ttaggccggatgtcatgaccggggttcgaaccccggt 7312506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 10061105 - 10061069
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  10061105 ttaggccggatgccatgaccggggttcgaatcccggt 10061069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 16816730 - 16816766
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  16816730 ttaggccggatgccatgaccggggttcgaaccgcggt 16816766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 23789502 - 23789470
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    ||||||||||||||||||| |||||||||||||    
T  23789502 ttaggccggatgccatgaccggggttcgaaccc 23789470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 31717336 - 31717372
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  31717336 ttaggccggatgccatgaccggggttcgaactccggt 31717372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 33228739 - 33228775
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| | |||||||||||||||    
T  33228739 ttaggccggatgccatgaccgaggttcgaaccccggt 33228775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 34708713 - 34708749
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||| |||||||||||| |||||||||||||||||    
T  34708713 ttaggctggatgccatgaccggggttcgaaccccggt 34708749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 35157173 - 35157137
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  35157173 ttaggccggatgtcatgaccggggttcgaaccccggt 35157137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 37410791 - 37410759
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    |||||||||||| ||||||||||||||||||||    
T  37410791 ttaggccggatgtcatgactggggttcgaaccc 37410759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 40013303 - 40013339
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| | |||||||||||||||    
T  40013303 ttaggccggatgccatgaccgaggttcgaaccccggt 40013339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 43416376 - 43416340
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  43416376 ttaggccggataccatgaccggggttcgaaccccggt 43416340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 46021520 - 46021484
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  46021520 ttaggccggatgtcatgaccggggttcgaaccccggt 46021484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 37420011 - 37420081
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||| ||  |||||||| |||||||||    
T  37420011 atgaattaacataaaagcttatttatttgcataaatta-tttttcataagctaaaaaataagccaatccaaa 37420081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 38490489 - 38490453
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||||||||||||||||||||    
T  38490489 ttaggccggatgccatgactggggttcgaaccccggt 38490453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 107
Target Start/End: Original strand, 21788562 - 21788604
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttt 107  Q
    |||||| ||||||||||||||||||||||||||| ||||||||    
T  21788562 atgaattaatataaaagcttatttatttgcataagttattttt 21788604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 12236160 - 12236196
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  12236160 ttaggccggatgccatgaccggggttcgaaccccggt 12236196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 32023291 - 32023327
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  32023291 ttaggccggatgccatgaccggggttcgaaccccggt 32023327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 35476579 - 35476543
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  35476579 ttaggccggatgccatgaccggggttcgaaccccggt 35476543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 36501497 - 36501426
Alignment:
Q  64 catgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||| || ||||||||||||||||||||||||  || ||||||| || ||| |||||||| |||||||||    
T  36501497 catgaattaacataaaagcttatttatttgcataagcta-tttttcacaagctcaaaaataagccaatccaaa 36501426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 39070058 - 39070094
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  39070058 ttaggccggatgccatgaccggggttcgaaccccggt 39070094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 42007304 - 42007268
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  42007304 ttaggccggatgccatgaccggggttcgaaccccggt 42007268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 42414544 - 42414580
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  42414544 ttaggccggatgccatgaccggggttcgaaccccggt 42414580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 43461423 - 43461387
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  43461423 ttaggccggatgccatgaccggggttcgaaccccggt 43461387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 8832562 - 8832632
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||||||||||||||||||  || |||||||||| ||  |||||||| |||||||||    
T  8832562 atgaattaacataaaagcttatttatttgcataagcta-tttttcataagctaaaaaataagtcaatccaaa 8832632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 33607082 - 33607116
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccg 218  Q
    ||||||| |||||||||||||||||||||||||||    
T  33607082 ttaggccagatgccatgactggggttcgaaccccg 33607116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 5903653 - 5903713
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||||||||||||||||||||  || |||||||| | ||| |||||||| |||||||||    
T  5903653 ataaaagcttatttatttgcataagcta-tttttcatgagctcaaaaataagccaatccaaa 5903713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 5903730 - 5903790
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||||||||||||||||||||  || |||||||| | ||| |||||||| |||||||||    
T  5903730 ataaaagcttatttatttgcataagcta-tttttcatgagctcaaaaataagccaatccaaa 5903790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 42064956 - 42064989
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataa 98  Q
    |||||| |||||||||||||||||||||||||||    
T  42064956 atgaattaatataaaagcttatttatttgcataa 42064989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 1120389 - 1120437
Alignment:
Q  64 catgaatcaatataaaagcttatttatttgcataaattattttttcata 112  Q
    ||||||| || ||||||| ||||||||||||||||  ||||||||||||    
T  1120389 catgaattaacataaaagattatttatttgcataagctattttttcata 1120437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 3048581 - 3048617
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  3048581 ttaggccggatgccatgatcggggttcgaaccccggt 3048617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 6731581 - 6731617
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  6731581 ttaggccggatgtcatgaccggggttcgaaccccggt 6731617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 7975103 - 7975067
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  7975103 ttaggccggatgctatgaccggggttcgaaccccggt 7975067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 8532145 - 8532181
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  8532145 ttaggccggatgctatgaccggggttcgaaccccggt 8532181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 10392684 - 10392720
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| || ||||||||||||||    
T  10392684 ttaggccggatgccatgaccggagttcgaaccccggt 10392720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 15897253 - 15897289
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  15897253 ttaggccggatgtcatgaccggggttcgaaccccggt 15897289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 17882753 - 17882789
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  17882753 ttaggctggatgccatgactagggttcgaaccccggt 17882789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 20251574 - 20251538
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  20251574 ttaggccggatgccatgatcggggttcgaaccccggt 20251538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 23080187 - 23080151
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  23080187 ttaggccggatgtcatgaccggggttcgaaccccggt 23080151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 24381284 - 24381320
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||| |||||||||||| |||||||||||||||||    
T  24381284 ttaggctggatgccatgaccggggttcgaaccccggt 24381320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 28855503 - 28855467
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  28855503 ttagggcggatgccatgactggggttcgaatcccggt 28855467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 34481760 - 34481724
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||| |||||||||||| |||||||||||||||||    
T  34481760 ttaggctggatgccatgaccggggttcgaaccccggt 34481724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 36754830 - 36754794
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  36754830 ttaggccggatgctatgaccggggttcgaaccccggt 36754794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 44948058 - 44948094
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  44948058 ttaggccggatgccatgaccggggttcgaactccggt 44948094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 24655013 - 24655049
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||||||||||||||||||||    
T  24655013 ttaggccggatgccatgactggggttcgaaccccggt 24655049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 32975792 - 32975858
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatc 132  Q
    |||||| |||||||||||||||||||||||||||  || |||||||||| ||| |||| |||||||||    
T  32975792 atgaattaatataaaagcttatttatttgcataagcta-tttttcataagctcaaaaacaagacaatc 32975858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 34286545 - 34286475
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| |||||||||||||||||||||||||||  || |||||||||| ||| |||||||| |||| ||||    
T  34286545 atgaattaatataaaagcttatttatttgcataaccta-tttttcataagctcaaaaataagtcaattcaaa 34286475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 23681048 - 23681085
Alignment:
Q  183 attaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||| |||||||||||||||||    
T  23681048 attaggccggatgccatgaccggggttcgaaccccggt 23681085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 2733655 - 2733691
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  2733655 ttaggccggatgccatgaccggggttcgaaccccggt 2733691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 6436722 - 6436758
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  6436722 ttaggccggatgccatgaccggggttcgaaccccggt 6436758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 8525290 - 8525254
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||| ||||||||||||||||||||||||||||||||    
T  8525290 ttagaccggatgccatgactggggttcgaaccccggt 8525254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 8569984 - 8570020
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||| |||||||||||||||||||||||    
T  8569984 ttaggccggatgcaatgactggggttcgaaccccggt 8570020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 9569763 - 9569799
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  9569763 ttaggccggatgccatgaccggggttcgaaccccggt 9569799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 10617824 - 10617860
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| ||||||||||||||||||||||||    
T  10617824 ttaggccggatgtcatgactggggttcgaaccccggt 10617860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 19649587 - 19649551
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  19649587 ttaggccggatgccatgaccggggttcgaaccccggt 19649551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 24242674 - 24242638
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  24242674 ttaggccggatgccatgaccggggttcgaaccccggt 24242638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 25063379 - 25063415
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  25063379 ttaggccggatgccatgaccggggttcgaaccccggt 25063415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 25250824 - 25250860
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  25250824 ttaggccggatgccatgaccggggttcgaaccccggt 25250860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 36055508 - 36055544
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  36055508 ttaggccggatgccatgaccggggttcgaaccccggt 36055544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 37295165 - 37295201
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  37295165 ttaggccggatgccatgaccggggttcgaaccccggt 37295201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 28879160 - 28879230
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||||||||||||||||||  || |||||||||| ||  |||||||| |||||||||    
T  28879160 atgaattaacataaaagcttatttatttgcataagcta-tttttcataagctaaaaaataagtcaatccaaa 28879230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 10096651 - 10096685
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccg 218  Q
    ||||||||||||||||||| |||||||||||||||    
T  10096651 ttaggccggatgccatgaccggggttcgaaccccg 10096685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 2563378 - 2563326
Alignment:
Q  83 ttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||||||||||||||||| |||| ||||| ||| |||||||| |||||||||    
T  2563378 ttatttatttgcataaatta-ttttacataacctctaaaataagccaatccaaa 2563326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 16972337 - 16972304
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataa 98  Q
    ||||||||||||||||| ||||||||||||||||    
T  16972337 atgaatcaatataaaagtttatttatttgcataa 16972304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 105
Target Start/End: Complemental strand, 18217252 - 18217219
Alignment:
Q  72 aatataaaagcttatttatttgcataaattattt 105  Q
    |||||||||| |||||||||||||||||||||||    
T  18217252 aatataaaagtttatttatttgcataaattattt 18217219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 24087286 - 24087346
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||||||||||||||||||||  || ||||||||  |||| |||||||| |||||||||    
T  24087286 ataaaagcttatttatttgcataagcta-tttttcattcactcaaaaataagtcaatccaaa 24087346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 403705 - 403741
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  403705 ttaggtcggatgccatgaccggggttcgaaccccggt 403741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 4312172 - 4312208
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  4312172 ttaggtcggatgccatgactggggttcgaactccggt 4312208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 4430824 - 4430788
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  4430824 ttaggccggatgtcatgaccggggttcgaaccccggt 4430788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 6317339 - 6317375
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  6317339 ttaggccggatgtcatgaccggggttcgaaccccggt 6317375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 6845072 - 6845036
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  6845072 ttaggccggatgccatgaccggggttcgaatcccggt 6845036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 14188129 - 14188165
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||  ||||||||||||||||    
T  14188129 ttaggccggatgccatgacctgggttcgaaccccggt 14188165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 16501688 - 16501724
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||| |||||||||||| |||||||||||||||||    
T  16501688 ttaggctggatgccatgaccggggttcgaaccccggt 16501724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 17919904 - 17919868
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  17919904 ttaggccggatgccatgaccggggttcgaacctcggt 17919868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 25893890 - 25893926
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  25893890 ttaggccggatgccatgatcggggttcgaaccccggt 25893926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 26226801 - 26226765
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| | |||||||||||||||    
T  26226801 ttaggccggatgccatgaccgaggttcgaaccccggt 26226765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 26690733 - 26690765
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    ||||||||||||||||||| |||||||||||||    
T  26690733 ttaggccggatgccatgaccggggttcgaaccc 26690765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 26738010 - 26738046
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  26738010 ttaggccggatgtcatgaccggggttcgaaccccggt 26738046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 27928197 - 27928233
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||| |||||||||||||| |||||||||||||||||    
T  27928197 ttagaccggatgccatgaccggggttcgaaccccggt 27928233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 31639191 - 31639155
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  31639191 ttaggccggatgccatgaccggggttcgaactccggt 31639155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 34711644 - 34711608
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  34711644 ttaggtcggatgccatgaccggggttcgaaccccggt 34711608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 36586521 - 36586557
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  36586521 ttaggtcggatgccatgaccggggttcgaaccccggt 36586557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 38953569 - 38953533
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  38953569 ttaggccggatgtcatgaccggggttcgaaccccggt 38953533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 40772654 - 40772618
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  40772654 ttaggccggatgccatgatcggggttcgaaccccggt 40772618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 43820907 - 43820943
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  43820907 ttaggccggatgccatgatcggggttcgaaccccggt 43820943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 44814902 - 44814938
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  44814902 ttaggccggatgtcatgaccggggttcgaaccccggt 44814938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 9705566 - 9705602
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||||||||||||||||||||    
T  9705566 ttaggccggatgccatgactggggttcgaaccccggt 9705602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 26988253 - 26988323
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||| ||||||||||||||| || |||||||||| ||| |||||||| |||||||||    
T  26988253 atgaattaacataaaagctaatttatttgcataaacta-tttttcataagctcaaaaataagtcaatccaaa 26988323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 1321656 - 1321714
Alignment:
Q  78 aaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||||||||||||||| || ||||||||||||| ||  |||||||| |||||||||    
T  1321656 aaagcttatttatttgcatgaactattttttcataagcttcaaaataagccaatccaaa 1321714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 32880668 - 32880634
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccg 218  Q
    |||||||||||||||||||||||||||||||||||    
T  32880668 ttaggccggatgccatgactggggttcgaaccccg 32880634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 37329383 - 37329323
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||||||||||||||||||||| ||| |||||||||| ||| |||||||| | |||||||    
T  37329383 ataaaagcttatttatttgcataagtta-tttttcataagctcaaaaataagtcgatccaaa 37329323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 47413487 - 47413547
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||||||||||||||||||||  || |||||||||| ||| |||||||| |||||||||    
T  47413487 ataaaagcttatttatttgcataagcta-tttttcataagctcaaaaataagccaatccaaa 47413547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 270410 - 270374
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  270410 ttaggccggatgccatgaccggggttcgaaccccggt 270374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 10635528 - 10635564
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  10635528 ttaggccggatgccatgaccggggttcgaaccccggt 10635564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 19338267 - 19338231
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  19338267 ttaggccggatgccatgaccggggttcgaaccccggt 19338231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 20164162 - 20164126
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  20164162 ttaggccggatgccatgaccggggttcgaaccccggt 20164126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 29005129 - 29005165
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  29005129 ttaggccggatgccatgaccggggttcgaaccccggt 29005165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 43676113 - 43676077
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  43676113 ttaggccggatgccatgaccggggttcgaaccccggt 43676077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 46500978 - 46500938
Alignment:
Q  68 aatcaatataaaagcttatttatttgcataaattatttttt 108  Q
    |||||| |||||||||||||||||||||||| |||||||||    
T  46500978 aatcaacataaaagcttatttatttgcataagttatttttt 46500938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 4068220 - 4068290
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| |||||||||| ||||||||||||||||  ||  ||||||||||||  |||||||| |||||||||    
T  4068220 atgaattaatataaaagtttatttatttgcataagcta-cttttcataaactaaaaaataagccaatccaaa 4068290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 41130109 - 41130171
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaaaa 138  Q
    |||||| |||||||||| | |||| |||||||| ||||| |||||||||||| |||||||||||    
T  41130109 ataaaatcttatttattagaataagttattttt-cataagctcgaaaataagccaatccaaaaa 41130171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 48819404 - 48819474
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||||||||||||||||||  || |||||||||| ||  |||||||| |||||||||    
T  48819404 atgaattaacataaaagcttatttatttgcataagcta-tttttcataagctaaaaaataagccaatccaaa 48819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 994685 - 994623
Alignment:
Q  75 ataaaagcttatttatttgcataaattatttttt-cataaactcgaaaataagacaatccaaa 136  Q
    |||||||||| |||||||| |||| ||||||||| ||||| ||| |||||||| |||||||||    
T  994685 ataaaagcttgtttatttgaataagttatttttttcataagctcaaaaataagtcaatccaaa 994623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 9572765 - 9572723
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttt 107  Q
    |||||| |||||||||||||||||||||||||||  |||||||    
T  9572765 atgaattaatataaaagcttatttatttgcataagctattttt 9572723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 28690110 - 28690179
Alignment:
Q  66 tgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||| || ||||||||||||||||||||||||  || |||||||||| ||| |||| ||| |||||||||    
T  28690110 tgaattaacataaaagcttatttatttgcataagcta-tttttcataagctcaaaaacaagtcaatccaaa 28690179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 39606444 - 39606478
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccg 218  Q
    ||||||||||||||||||| |||||||||||||||    
T  39606444 ttaggccggatgccatgaccggggttcgaaccccg 39606478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 13555814 - 13555777
Alignment:
Q  183 attaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  13555814 attaggccggatgtcatgaccggggttcgaaccccggt 13555777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 28122724 - 28122765
Alignment:
Q  66 tgaatcaatataaaagcttatttatttgcataaattattttt 107  Q
    ||||| ||||||||||||||||||||| |||||| |||||||    
T  28122724 tgaattaatataaaagcttatttattttcataaactattttt 28122765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 10430428 - 10430396
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    ||||||||||||| |||||||||||||||||||    
T  10430428 ttaggccggatgcaatgactggggttcgaaccc 10430396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 13018112 - 13018148
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||| |||||||||||||| |||||||||||||||||    
T  13018112 ttagaccggatgccatgaccggggttcgaaccccggt 13018148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 17068191 - 17068227
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  17068191 ttaggccggatgccatgagcggggttcgaaccccggt 17068227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 18089857 - 18089821
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  18089857 ttaggccggatgtcatgaccggggttcgaaccccggt 18089821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 19220288 - 19220320
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttt 107  Q
    ||||||||||||||||||||||||| |||||||    
T  19220288 ataaaagcttatttatttgcataaactattttt 19220320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 21522356 - 21522392
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  21522356 ttaggtcggatgccatgaccggggttcgaaccccggt 21522392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 23225379 - 23225343
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  23225379 ttaggtcggatgccatgacaggggttcgaaccccggt 23225343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 25821039 - 25821007
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    ||||||||||||||||||| |||||||||||||    
T  25821039 ttaggccggatgccatgaccggggttcgaaccc 25821007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 27078587 - 27078623
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  27078587 ttaggccggatgtcatgaccggggttcgaaccccggt 27078623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 40958663 - 40958627
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  40958663 ttaggccggatgccatgaccggggttcgaatcccggt 40958627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 43086560 - 43086524
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  43086560 ttaggccggatgccatgatcggggttcgaaccccggt 43086524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 48314206 - 48314242
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  48314206 ttaggccggatgtcatgaccggggttcgaaccccggt 48314242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 48391995 - 48392031
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||  ||||||||||||||||    
T  48391995 ttaggccggatgccatgaccagggttcgaaccccggt 48392031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 48731845 - 48731809
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  48731845 ttaggccagatgccatgaccggggttcgaaccccggt 48731809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 52492770 - 52492734
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  52492770 ttaggccggatgtcatgattggggttcgaaccccggt 52492734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 34526318 - 34526248
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||||||||||||||||||| || |||||||||| ||||||| |||| |||| ||||    
T  34526318 atgaattaacataaaagcttatttatttgcataaacta-tttttcataagctcgaaagtaagtcaattcaaa 34526248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 108
Target Start/End: Original strand, 48721925 - 48721968
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattatttttt 108  Q
    |||||| |||||||||||||||||||||| ||||||||||||||    
T  48721925 atgaattaatataaaagcttatttatttgtataaattatttttt 48721968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 29877667 - 29877607
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||||||||||||||||||||||||  |||| ||||| ||| |||||||| |||||||||    
T  29877667 ataaaagcttatttatttgcataaatt-gttttgcataagctcaaaaataagccaatccaaa 29877607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 7512806 - 7512842
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  7512806 ttaggccggatgccatgaccggggttcgaaccccggt 7512842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 12821204 - 12821240
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  12821204 ttaggccggatgccatgaccggggttcgaaccccggt 12821240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 24031185 - 24031253
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatcc 133  Q
    |||||| |||||||||| || ||||||||||||| |||| ||||||||| ||  ||||||||| |||||    
T  24031185 atgaattaatataaaagtttttttatttgcataagttatattttcataacctaaaaaataagaaaatcc 24031253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 35828313 - 35828349
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  35828313 ttaggccggatgccatgaccggggttcgaaccccggt 35828349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 36526230 - 36526194
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||| ||||||||||||||||||    
T  36526230 ttaggccggatgccatgattggggttcgaaccccggt 36526194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 47462125 - 47462089
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  47462125 ttaggccggatgccatgaccggggttcgaaccccggt 47462089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 48591394 - 48591335
Alignment:
Q  76 taaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||||||||||||||||||||  || |||||||||| ||| |||||||| |||||||||    
T  48591394 taaaagcttatttatttgcataagcta-tttttcataagctcaaaaataagccaatccaaa 48591335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 107
Target Start/End: Original strand, 897082 - 897117
Alignment:
Q  72 aatataaaagcttatttatttgcataaattattttt 107  Q
    |||||||||||||||||||||||||||| |||||||    
T  897082 aatataaaagcttatttatttgcataaactattttt 897117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 220
Target Start/End: Complemental strand, 3848906 - 3848871
Alignment:
Q  185 taggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||| |||||||||||||||||    
T  3848906 taggccggatgccatgaccggggttcgaaccccggt 3848871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 29996695 - 29996757
Alignment:
Q  73 atataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||||||||||||||||||||||||||  |||| || |||||| |||||||| ||| |||||    
T  29996695 atataaaagcttatttatttgcataaatt-gttttgcaaaaactcaaaaataagtcaaaccaaa 29996757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 36741009 - 36741079
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||||| | ||||||||||||||||||||||  || |||||||||| ||  |||||||| |||||||||    
T  36741009 atgaatcaacacaaaagcttatttatttgcataagcta-tttttcataagctaaaaaataagccaatccaaa 36741079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 42611850 - 42611779
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||||||||||||||||||||   |||||||||| ||  |||||| | |||||||||    
T  42611850 atgaattaacataaaagcttatttatttgcataaatctatttttcataagcttaaaaatacgccaatccaaa 42611779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 11256642 - 11256600
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttt 107  Q
    |||||| || ||||||||||||||||||||||||| |||||||    
T  11256642 atgaattaacataaaagcttatttatttgcataaactattttt 11256600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 18630876 - 18630834
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttt 107  Q
    |||||| |||||||||||||||||||||||||||  |||||||    
T  18630876 atgaattaatataaaagcttatttatttgcataagctattttt 18630834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 37050740 - 37050774
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccg 218  Q
    ||||||||||||||||||| |||||||||||||||    
T  37050740 ttaggccggatgccatgaccggggttcgaaccccg 37050774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 3564321 - 3564381
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||| ||||||||||||||||  || |||||||||| ||| |||||||| |||||||||    
T  3564321 ataaaagattatttatttgcataagcta-tttttcataagctcaaaaataagtcaatccaaa 3564381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 9201679 - 9201619
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| ||||||||||||||||| ||||||| | |||||||| ||||||||  ||||||||    
T  9201679 ataaaaacttatttatttgcataagttattttat-ataaactctaaaataagctaatccaaa 9201619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 12495615 - 12495555
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| |||||||||||||||||  || |||| ||||| ||| ||||||||||||||||||    
T  12495615 ataaaaacttatttatttgcataagctactttt-cataagctcaaaaataagacaatccaaa 12495555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 23297466 - 23297406
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||||||||||||||||||||  || |||| ||||| ||| |||||||| |||||||||    
T  23297466 ataaaagcttatttatttgcataagcta-ttttgcataagctcaaaaataagccaatccaaa 23297406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 27368123 - 27368062
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||| ||||||||||||| ||||  ||||||||||||| ||  |||||||| |||||||||    
T  27368123 ataaatgcttatttatttgaataagatattttttcataagctaaaaaataagccaatccaaa 27368062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 28033231 - 28033264
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaacccc 217  Q
    ||||||||||||||||||| ||||||||||||||    
T  28033231 ttaggccggatgccatgaccggggttcgaacccc 28033264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 28074479 - 28074539
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| |||||||||||||||||  || |||||||||||||  |||||||| |||||||||    
T  28074479 ataaaatcttatttatttgcataagcta-tttttcataaactaaaaaataagccaatccaaa 28074539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 28663687 - 28663747
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||||||| ||| ||||||||| || |||||||||| ||| |||||||| |||||||||    
T  28663687 ataaaagcttaattagttgcataaacta-tttttcataagctcaaaaataagtcaatccaaa 28663747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 31263591 - 31263554
Alignment:
Q  183 attaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  31263591 attagaccggatgccatgaccggggttcgaaccccggt 31263554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 31375151 - 31375188
Alignment:
Q  183 attaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  31375151 attaggccagatgccatgaccggggttcgaaccccggt 31375188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 43699541 - 43699601
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||||||||||||||| |||| ||  |||||||||| ||| |||||||| |||||||||    
T  43699541 ataaaagcttatttatttgtataagtt-gtttttcataagctcaaaaataagccaatccaaa 43699601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 191 - 220
Target Start/End: Complemental strand, 48628546 - 48628517
Alignment:
Q  191 ggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||||||||||||||    
T  48628546 ggatgccatgactggggttcgaaccccggt 48628517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 1033538 - 1033506
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    ||||||||||||||||||| |||||||||||||    
T  1033538 ttaggccggatgccatgaccggggttcgaaccc 1033506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 5397029 - 5396993
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  5397029 ttaggccggatgtcatgaccggggttcgaaccccggt 5396993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 7944313 - 7944277
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  7944313 ttaggccggatgtcatgaccggggttcgaaccccggt 7944277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 14285134 - 14285170
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| || ||||||||||||||    
T  14285134 ttaggccggatgccatgaccggcgttcgaaccccggt 14285170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 18258119 - 18258178
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaa 135  Q
    ||||||| ||||||||||| |||| ||||||| | |||| ||| |||||||||||||||||    
T  18258119 ataaaagtttatttatttgtataagttattttct-ataagctcaaaaataagacaatccaa 18258178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 21378327 - 21378363
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  21378327 ttaggccggatgccatgaccggggttcgaactccggt 21378363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 25586416 - 25586380
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  25586416 ttaggccggatgccatgatcggggttcgaaccccggt 25586380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 30044673 - 30044637
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  30044673 ttaggccggatgccatgatcggggttcgaaccccggt 30044637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 31436007 - 31435971
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  31436007 ttaggccggatgtcatgattggggttcgaaccccggt 31435971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 34684241 - 34684277
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  34684241 ttaggccggatgtcatgaccggggttcgaaccccggt 34684277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 36860938 - 36860902
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  36860938 ttaggccggatgtcataactggggttcgaaccccggt 36860902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 38345803 - 38345734
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || |||||||||||||||||| |||||  |||||||  |||| ||| |||||||| |||||||||    
T  38345803 atgaattaacataaaagcttatttatttacataagctattttt--ataagctcaaaaataagccaatccaaa 38345734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 39284664 - 39284628
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  39284664 ttaggccggatgtcatgaccggggttcgaaccccggt 39284628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 42153144 - 42153073
Alignment:
Q  64 catgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    ||||||| || ||||||||||||||||||||||||  || |||| | ||| ||| |||||||| |||||||||    
T  42153144 catgaattaacataaaagcttatttatttgcataagcta-ttttacgtaagctcaaaaataagccaatccaaa 42153073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 42154227 - 42154191
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  42154227 ttaggccggatgtcatgaccggggttcgaaccccggt 42154191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 42412077 - 42412041
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  42412077 ttaggccagatgccatgaccggggttcgaaccccggt 42412041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 46552964 - 46553000
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  46552964 ttaggccggatgtcatgaccggggttcgaaccccggt 46553000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 49319770 - 49319802
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    ||||||||||||||||||| |||||||||||||    
T  49319770 ttaggccggatgccatgaccggggttcgaaccc 49319802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 49882798 - 49882762
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| | |||||||||||||||    
T  49882798 ttaggccggatgccatgaccgaggttcgaaccccggt 49882762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 50779880 - 50779844
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  50779880 ttaggccggatgccatgaccgggattcgaaccccggt 50779844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 857 - 893
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  857 ttaggccggatgccatgaccggggttcgaaccccggt 893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 384 - 420
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  384 ttaggccggatgccatgaccggggttcgaaccccggt 420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 9406 - 9442
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  9406 ttaggccggatgccatgaccggggttcgaaccccggt 9442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 1330 - 1294
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  1330 ttaggccggatgccatgaccggggttcgaaccccggt 1294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 4100 - 4068
Alignment:
Q  188 gccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||||||||||||||||    
T  4100 gccggatgccatgactggggttcgaaccccggt 4068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 160487 - 160523
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  160487 ttaggccggatgccatgaccggggttcgaaccccggt 160523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 39402 - 39366
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  39402 ttaggccggatgccatgaccggggttcgaaccccggt 39366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 3440765 - 3440801
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  3440765 ttaggccggatgccatgaccggggttcgaaccccggt 3440801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 4232266 - 4232230
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  4232266 ttaggccggatgccatgaccggggttcgaaccccggt 4232230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 4833198 - 4833162
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  4833198 ttaggccggatgccatgaccggggttcgaaccccggt 4833162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 4976797 - 4976761
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  4976797 ttaggccggatgccatgaccggggttcgaaccccggt 4976761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 8381118 - 8381154
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  8381118 ttaggccggatgccatgaccggggttcgaaccccggt 8381154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 8507971 - 8508007
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||||||||||| |||||||||    
T  8507971 ttaggccggatgccatgactggggttcaaaccccggt 8508007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 9493537 - 9493573
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||| ||||||||||||||||||||||||||||||    
T  9493537 ttaggctggatgccatgactggggttcgaaccccggt 9493573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 9609971 - 9610007
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  9609971 ttaggccggatgccatgaccggggttcgaaccccggt 9610007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 10474003 - 10473967
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  10474003 ttaggccggatgccatgaccggggttcgaaccccggt 10473967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 13525208 - 13525244
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  13525208 ttaggccggatgccatgaccggggttcgaaccccggt 13525244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 24650636 - 24650600
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  24650636 ttaggccggatgccatgaccggggttcgaaccccggt 24650600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 29212154 - 29212118
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  29212154 ttaggccggatgccatgaccggggttcgaaccccggt 29212118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 35069352 - 35069388
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  35069352 ttaggccggatgccatgaccggggttcgaaccccggt 35069388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 40840208 - 40840244
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  40840208 ttaggccggatgccatgaccggggttcgaaccccggt 40840244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 43605665 - 43605629
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  43605665 ttaggccggatgccatgaccggggttcgaaccccggt 43605629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 47069046 - 47069082
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  47069046 ttaggccggatgccatgaccggggttcgaaccccggt 47069082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 53669800 - 53669764
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||||| ||||||||||||||    
T  53669800 ttaggccggatgccatgactggagttcgaaccccggt 53669764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 28171068 - 28171033
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccgg 219  Q
    ||||||||||||||||||| ||||||||||||||||    
T  28171068 ttaggccggatgccatgaccggggttcgaaccccgg 28171033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 40240558 - 40240489
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||||||||||||||||||||||||  || |||||||||| ||| |||||||| |||||||||    
T  40240558 atgaattaagataaaagcttatttatttgcataagcta-tttttcataagctc-aaaataagtcaatccaaa 40240489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 47520483 - 47520430
Alignment:
Q  77 aaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaat 131  Q
    |||| ||||||||| ||||||||||||||||| |||||||| |||||||| ||||    
T  47520483 aaaaacttatttatatgcataaattatttttt-ataaactcaaaaataagtcaat 47520430  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 1242255 - 1242292
Alignment:
Q  183 attaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||  |||||||||||||||||    
T  1242255 attaggccggatgccatgatcggggttcgaaccccggt 1242292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 2789068 - 2789031
Alignment:
Q  183 attaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  2789068 attaggcctgatgccatgaccggggttcgaaccccggt 2789031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 21296794 - 21296734
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| ||||||||||||||||||||  |||| ||||| ||| |||||||| |||||||||    
T  21296794 ataaaaacttatttatttgcataaatt-gttttgcataatctcaaaaataagtcaatccaaa 21296734  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 29002829 - 29002889
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| |||||||||||||||||| |||||||| |||| ||| ||||||||  ||||||||    
T  29002829 ataaaatcttatttatttgcataaagtatttttt-ataagctcaaaaataagttaatccaaa 29002889  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 2096674 - 2096638
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||| |||||||||||| |||||||||||||||||    
T  2096674 ttaggctggatgccatgaccggggttcgaaccccggt 2096638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 3876244 - 3876174
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataaga-caatccaaa 136  Q
    |||||| ||||||||| |||||||||||||||||  || |||||||||| ||| ||||||||| |||||||||    
T  3876244 atgaattaatataaaaacttatttatttgcataagcta-tttttcataagctc-aaaataagatcaatccaaa 3876174  T

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Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 3917805 - 3917841
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  3917805 ttaggccggatgtcatgaccggggttcgaaccccggt 3917841  T

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Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 6583324 - 6583288
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  6583324 ttaggccggatgccatgatcggggttcgaaccccggt 6583288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 8128379 - 8128343
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||  |||||||||||||||||    
T  8128379 ttaggccggatgccatgatcggggttcgaaccccggt 8128343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 8792818 - 8792782
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  8792818 ttaggctggatgccatgattggggttcgaaccccggt 8792782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 11312629 - 11312665
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  11312629 ttaggccggatgctatgaccggggttcgaaccccggt 11312665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 11751251 - 11751287
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||| || |||||||||||||||||    
T  11751251 ttaggccggatgccatcaccggggttcgaaccccggt 11751287  T

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Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 24250764 - 24250800
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  24250764 ttaggccggatgctatgaccggggttcgaaccccggt 24250800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 25118795 - 25118759
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||  ||||||||||||||||    
T  25118795 ttaggccggatgccatgaccagggttcgaaccccggt 25118759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 27396893 - 27396925
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    ||||||||||||||||||| |||||||||||||    
T  27396893 ttaggccggatgccatgaccggggttcgaaccc 27396925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 28197073 - 28197037
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  28197073 ttaggccggatgtcatgaccggggttcgaaccccggt 28197037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 31787627 - 31787686
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataa 125  Q
    |||||| |||||||| | ||||||||||||||||| || |||||||||| ||| |||||||    
T  31787627 atgaattaatataaacgtttatttatttgcataaacta-tttttcataagctcaaaaataa 31787686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 32961067 - 32961031
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  32961067 ttaggccagatgccatgaccggggttcgaaccccggt 32961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 35240069 - 35240105
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||| |||| |||||||||||||||||    
T  35240069 ttaggccggatgccttgaccggggttcgaaccccggt 35240105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 35359756 - 35359792
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||||||||||  ||||||||||||||||    
T  35359756 ttaggccggatgccatgaccagggttcgaaccccggt 35359792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 35480382 - 35480313
Alignment:
Q  65 atgaatcaatataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| || ||| ||||| |||||||||||||| |||  ||||||||| ||| |||||||| |||||||||    
T  35480382 atgaattaacatacaagctcatttatttgcataagtta--ttttcataagctcaaaaataagtcaatccaaa 35480313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 36266346 - 36266378
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttt 107  Q
    |||||| ||||||||||||||||||||||||||    
T  36266346 ataaaaacttatttatttgcataaattattttt 36266378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 38127931 - 38127895
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  38127931 ttaggccggatgctatgaccggggttcgaaccccggt 38127895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 42296750 - 42296786
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||| |||||| |||||||||||||||||    
T  42296750 ttaggccggatgtcatgaccggggttcgaaccccggt 42296786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 43079904 - 43079845
Alignment:
Q  76 taaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||||||||||||||| ||||  || |||||||||| |||| ||||||| |||||||||    
T  43079904 taaaagcttatttatttgaataagcta-tttttcataagctcgtaaataagtcaatccaaa 43079845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 43898052 - 43898016
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  43898052 ttaggccggatgccatgaccgggattcgaaccccggt 43898016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 52256841 - 52256805
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||| |||||||||||| |||||||||||||||||    
T  52256841 ttaggctggatgccatgaccggggttcgaaccccggt 52256805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 54097529 - 54097493
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  54097529 ttaggccggatgccatgaccggggttggaaccccggt 54097493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 107
Target Start/End: Original strand, 1170 - 1205
Alignment:
Q  72 aatataaaagcttatttatttgcataaattattttt 107  Q
    ||||||||||||||||||||||||||| ||||||||    
T  1170 aatataaaagcttatttatttgcataagttattttt 1205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 24862 - 24922
Alignment:
Q  75 ataaaagcttatttatttgcataaattattttttcataaactcgaaaataagacaatccaaa 136  Q
    |||||| |||||||||||||||||  || |||| ||||| ||| ||||||||||||||||||    
T  24862 ataaaaacttatttatttgcataagctactttt-cataagctcaaaaataagacaatccaaa 24922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 93058 - 93021
Alignment:
Q  183 attaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  93058 attaggctggatgccatgaccggggttcgaaccccggt 93021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0882 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0882
Description:

Target: scaffold0882; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 3786 - 3754
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    ||||||||||||| |||||||||||||||||||    
T  3786 ttaggccggatgctatgactggggttcgaaccc 3754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 2517 - 2553
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  2517 ttaggccggatgctatgaccggggttcgaaccccggt 2553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 2517 - 2553
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  2517 ttaggccggatgctatgaccggggttcgaaccccggt 2553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 1147 - 1115
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccc 216  Q
    ||||||||||||||||||| |||||||||||||    
T  1147 ttaggccggatgccatgaccggggttcgaaccc 1115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 195780 - 195816
Alignment:
Q  184 ttaggccggatgccatgactggggttcgaaccccggt 220  Q
    |||||||||||  ||||||||||||||||||||||||    
T  195780 ttaggccggatttcatgactggggttcgaaccccggt 195816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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