View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15156_high_9 (Length: 273)
Name: NF15156_high_9
Description: NF15156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15156_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 3 - 259
Target Start/End: Original strand, 28266844 - 28267100
Alignment:
| Q |
3 |
acactttcacatacaaaagcttgtatgtggtgtggtgaagcatacactcatgatcaacatttgatgttgataacttccttatccaacagacagtaacatt |
102 |
Q |
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| T |
28266844 |
acactttcacatacaaaagcttgtatgtggtgtggtgaagcatacactcatgatcaacatttgatgttgataacttccttatccaacagacagtaacatt |
28266943 |
T |
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| Q |
103 |
ggtaaagaactgtctatgtggaatggaagttggacaatactgatccttttaacttaaaagaaagaaaaatgtgagtccaaattcacaaaccatgttacgt |
202 |
Q |
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| T |
28266944 |
gctaaagaactgtctatgtggaatggaagttggataatactgatccttttaacttaaaagaaagaaaaatgtgagtccaaattcacaaaccatgttacgt |
28267043 |
T |
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| Q |
203 |
aacatgaatatcttcctaaagttgctacaaggtttagtggtccatgatgtgaatgtt |
259 |
Q |
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| T |
28267044 |
aacatgaatatcttcctaaagttgctacaaggtttagtggtccatgatgtgaatgtt |
28267100 |
T |
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