View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15156_low_11 (Length: 269)
Name: NF15156_low_11
Description: NF15156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15156_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 32192123 - 32191864
Alignment:
| Q |
1 |
ttgataatacaagctctcatactttcaatgaaagcgaggttattcggctaagagacttgttcagagaatgggatatccatgagagtgacttgtttggacc |
100 |
Q |
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| T |
32192123 |
ttgataatacaagctctcatactttcaatgaaagcgaggttattcggctaagagacttgttcagagaatgggatatccatgagagtgacttgtttggacc |
32192024 |
T |
|
| Q |
101 |
ttatgaacttctagacttcgttctcctcgatccttacaaagatggtaagtaaaaagaaacttaatatcactagaattcaataatgaatctgctgatgcat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| | |||||||||||||| ||||| |
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| T |
32192023 |
ttatgaacttctagacttcgttctcctcgatccttacgaagatggtaagtaaaaagaaacttaacgtcactagaatttagtaatgaatctgctgctgcat |
32191924 |
T |
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| Q |
201 |
actgcaacaaaccctatttcatcgataaatacagttgaactcgttacttattatctctgc |
260 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |
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| T |
32191923 |
actgcaacaaaccctatttcattgataaatacagttgaactcgttacttatcatctctgc |
32191864 |
T |
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