View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15156_low_6 (Length: 397)

Name: NF15156_low_6
Description: NF15156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15156_low_6
NF15156_low_6
[»] chr6 (34 HSPs)
chr6 (103-249)||(34905360-34905509)
chr6 (89-249)||(5106308-5106471)
chr6 (89-252)||(10133162-10133328)
chr6 (88-234)||(31116146-31116295)
chr6 (103-234)||(445842-445976)
chr6 (134-249)||(16851980-16852098)
chr6 (104-242)||(21987317-21987458)
chr6 (89-249)||(1392640-1392800)
chr6 (114-234)||(2675930-2676053)
chr6 (139-242)||(12780773-12780879)
chr6 (126-248)||(32112725-32112850)
chr6 (103-249)||(31443983-31444132)
chr6 (88-249)||(12753767-12753931)
chr6 (105-249)||(19090221-19090369)
chr6 (103-180)||(35128802-35128879)
chr6 (132-249)||(16187441-16187557)
chr6 (132-249)||(16187659-16187775)
chr6 (103-180)||(4595766-4595843)
chr6 (103-227)||(32122819-32122946)
chr6 (103-249)||(10060883-10061033)
chr6 (108-202)||(17144725-17144822)
chr6 (103-177)||(12327287-12327361)
chr6 (106-162)||(6531395-6531451)
chr6 (103-143)||(8441953-8441993)
chr6 (103-143)||(8450757-8450797)
chr6 (103-178)||(2931585-2931660)
chr6 (103-162)||(12690276-12690335)
chr6 (103-148)||(373513-373558)
chr6 (103-148)||(9940382-9940427)
chr6 (169-248)||(8441857-8441939)
chr6 (169-248)||(8450661-8450743)
chr6 (103-147)||(12488156-12488200)
chr6 (105-149)||(19737545-19737589)
chr6 (89-141)||(32439486-32439538)
[»] chr3 (56 HSPs)
chr3 (88-249)||(28529262-28529424)
chr3 (88-249)||(20493452-20493616)
chr3 (88-249)||(37776710-37776874)
chr3 (88-249)||(41451902-41452066)
chr3 (88-249)||(24734714-24734878)
chr3 (88-249)||(52123963-52124127)
chr3 (115-242)||(18427164-18427294)
chr3 (88-249)||(5452069-5452231)
chr3 (104-246)||(20791321-20791466)
chr3 (103-249)||(27243069-27243219)
chr3 (109-246)||(46160977-46161117)
chr3 (103-202)||(26310500-26310602)
chr3 (109-234)||(46450095-46450224)
chr3 (123-243)||(29588746-29588869)
chr3 (88-243)||(48351445-48351603)
chr3 (104-249)||(14236044-14236192)
chr3 (88-248)||(29755509-29755672)
chr3 (105-177)||(46237128-46237200)
chr3 (109-234)||(138793-138921)
chr3 (88-241)||(45515512-45515666)
chr3 (135-252)||(50156664-50156784)
chr3 (105-178)||(41707520-41707593)
chr3 (103-180)||(46575972-46576049)
chr3 (89-228)||(10948588-10948730)
chr3 (105-177)||(37600212-37600284)
chr3 (105-148)||(24748933-24748976)
chr3 (109-180)||(30624661-30624732)
chr3 (105-180)||(54140972-54141047)
chr3 (108-249)||(8824986-8825130)
chr3 (89-202)||(22604570-22604686)
chr3 (103-177)||(50661604-50661678)
chr3 (118-234)||(55452037-55452156)
chr3 (89-141)||(13639412-13639464)
chr3 (127-202)||(19345054-19345132)
chr3 (192-248)||(43016529-43016585)
chr3 (119-249)||(2009035-2009167)
chr3 (103-249)||(15790377-15790525)
chr3 (181-252)||(39186069-39186140)
chr3 (88-202)||(40715916-40716033)
chr3 (181-239)||(2419481-2419539)
chr3 (104-177)||(13809107-13809179)
chr3 (99-148)||(42780690-42780739)
chr3 (105-162)||(43657093-43657150)
chr3 (107-249)||(24748916-24749062)
chr3 (88-164)||(29389108-29389184)
chr3 (90-141)||(29235658-29235709)
chr3 (105-148)||(38928032-38928075)
chr3 (105-162)||(10769822-10769879)
chr3 (196-249)||(49418426-49418479)
chr3 (90-139)||(54187050-54187099)
chr3 (117-177)||(21232604-21232664)
chr3 (213-249)||(27243054-27243090)
chr3 (168-239)||(29388611-29388685)
chr3 (103-171)||(36750960-36751028)
chr3 (89-141)||(48543262-48543314)
chr3 (88-144)||(52951475-52951531)
[»] chr4 (59 HSPs)
chr4 (88-249)||(8108965-8109129)
chr4 (88-249)||(43771135-43771299)
chr4 (90-249)||(722168-722330)
chr4 (88-249)||(39471166-39471330)
chr4 (303-388)||(11127963-11128048)
chr4 (89-248)||(50164405-50164567)
chr4 (103-249)||(754587-754736)
chr4 (103-249)||(20454564-20454711)
chr4 (88-249)||(24834587-24834751)
chr4 (103-249)||(47009213-47009362)
chr4 (121-249)||(26361315-26361446)
chr4 (89-249)||(49242180-49242343)
chr4 (106-249)||(34129407-34129553)
chr4 (116-241)||(24938430-24938558)
chr4 (17-75)||(11127716-11127774)
chr4 (109-249)||(19447161-19447305)
chr4 (132-249)||(45310955-45311075)
chr4 (88-249)||(40991596-40991760)
chr4 (122-249)||(22542424-22542554)
chr4 (103-234)||(33653511-33653645)
chr4 (104-245)||(25719123-25719268)
chr4 (105-180)||(48339419-48339494)
chr4 (109-249)||(13069971-13070114)
chr4 (112-238)||(29699522-29699650)
chr4 (115-223)||(50652369-50652479)
chr4 (103-248)||(49077273-49077421)
chr4 (85-200)||(46242000-46242116)
chr4 (85-162)||(47237838-47237915)
chr4 (105-180)||(42862500-42862575)
chr4 (104-162)||(21776942-21777000)
chr4 (103-177)||(22592328-22592402)
chr4 (109-249)||(10169652-10169795)
chr4 (103-148)||(16178697-16178742)
chr4 (103-180)||(33996014-33996091)
chr4 (106-162)||(2088762-2088818)
chr4 (127-206)||(31250933-31251015)
chr4 (109-211)||(20225386-20225491)
chr4 (105-162)||(37315589-37315643)
chr4 (103-158)||(39016687-39016742)
chr4 (120-180)||(11127794-11127854)
chr4 (211-252)||(11127854-11127894)
chr4 (117-217)||(50481584-50481687)
chr4 (103-180)||(50571888-50571965)
chr4 (105-177)||(16178610-16178681)
chr4 (103-162)||(27654501-27654560)
chr4 (191-246)||(37451023-37451078)
chr4 (106-177)||(41153280-41153351)
chr4 (119-166)||(43124607-43124654)
chr4 (105-148)||(51206157-51206200)
chr4 (211-249)||(5545714-5545752)
chr4 (117-249)||(38636375-38636508)
chr4 (103-145)||(40812061-40812103)
chr4 (102-166)||(18421922-18421984)
chr4 (99-140)||(30111787-30111828)
chr4 (99-136)||(37422921-37422958)
chr4 (192-249)||(38537520-38537577)
chr4 (105-173)||(2187899-2187967)
chr4 (114-162)||(48608115-48608163)
chr4 (88-124)||(53870998-53871034)
[»] chr7 (56 HSPs)
chr7 (103-249)||(22189963-22190112)
chr7 (107-249)||(11824099-11824242)
chr7 (88-249)||(27949282-27949446)
chr7 (88-249)||(27888291-27888455)
chr7 (109-249)||(11692209-11692352)
chr7 (89-249)||(32212877-32213039)
chr7 (88-249)||(32205088-32205249)
chr7 (88-249)||(33008113-33008274)
chr7 (103-249)||(7775024-7775172)
chr7 (103-249)||(39254107-39254256)
chr7 (103-249)||(44350809-44350958)
chr7 (88-249)||(46517302-46517464)
chr7 (103-234)||(12263458-12263592)
chr7 (103-249)||(6442189-6442338)
chr7 (88-242)||(14795140-14795297)
chr7 (88-242)||(15242132-15242289)
chr7 (88-216)||(31502504-31502635)
chr7 (141-249)||(6580009-6580120)
chr7 (105-177)||(17354609-17354681)
chr7 (134-249)||(25686842-25686960)
chr7 (104-249)||(24539129-24539278)
chr7 (88-240)||(19422850-19423005)
chr7 (180-249)||(30742547-30742616)
chr7 (109-249)||(48374446-48374589)
chr7 (117-181)||(8073366-8073430)
chr7 (104-249)||(17749719-17749868)
chr7 (153-249)||(27320448-27320547)
chr7 (103-180)||(44511015-44511092)
chr7 (105-180)||(13919806-13919881)
chr7 (118-180)||(19494418-19494480)
chr7 (108-177)||(26703522-26703591)
chr7 (109-237)||(32178823-32178953)
chr7 (90-141)||(43930078-43930129)
chr7 (105-249)||(45909481-45909630)
chr7 (89-238)||(7459353-7459505)
chr7 (103-180)||(12271010-12271086)
chr7 (120-180)||(10477278-10477338)
chr7 (105-177)||(22786177-22786249)
chr7 (99-130)||(22155939-22155970)
chr7 (99-130)||(22211854-22211885)
chr7 (103-162)||(32055600-32055659)
chr7 (194-249)||(38065333-38065388)
chr7 (114-177)||(46067973-46068036)
chr7 (184-234)||(12167315-12167365)
chr7 (99-141)||(25980769-25980811)
chr7 (109-151)||(31874061-31874103)
chr7 (106-148)||(45909570-45909612)
chr7 (103-144)||(2520657-2520698)
chr7 (118-171)||(25428567-25428620)
chr7 (103-148)||(27320249-27320294)
chr7 (180-249)||(36845498-36845567)
chr7 (119-211)||(36845567-36845661)
chr7 (90-147)||(47821990-47822047)
chr7 (106-162)||(14759670-14759726)
chr7 (105-145)||(19840908-19840948)
chr7 (98-142)||(49160366-49160410)
[»] chr2 (49 HSPs)
chr2 (107-249)||(9470109-9470253)
chr2 (88-249)||(26767768-26767932)
chr2 (88-249)||(45554576-45554732)
chr2 (103-249)||(6980127-6980276)
chr2 (88-249)||(12989200-12989364)
chr2 (103-245)||(38464187-38464332)
chr2 (105-249)||(44274260-44274407)
chr2 (103-235)||(10981542-10981677)
chr2 (88-202)||(18511263-18511380)
chr2 (118-248)||(35316409-35316542)
chr2 (104-244)||(15884458-15884597)
chr2 (103-248)||(11539447-11539598)
chr2 (93-241)||(19639107-19639258)
chr2 (93-241)||(19837700-19837851)
chr2 (117-249)||(32856142-32856277)
chr2 (89-228)||(36471866-36472008)
chr2 (105-177)||(42182915-42182987)
chr2 (105-171)||(28898125-28898191)
chr2 (108-177)||(1110227-1110296)
chr2 (90-180)||(3804595-3804686)
chr2 (103-177)||(15508938-15509012)
chr2 (86-243)||(30718340-30718499)
chr2 (104-162)||(41805873-41805931)
chr2 (105-162)||(1107064-1107121)
chr2 (106-162)||(4964770-4964826)
chr2 (118-162)||(6315697-6315741)
chr2 (88-243)||(37652258-37652416)
chr2 (103-249)||(34142146-34142295)
chr2 (103-145)||(42579771-42579813)
chr2 (110-201)||(2476565-2476659)
chr2 (88-223)||(16719463-16719601)
chr2 (106-166)||(17188092-17188152)
chr2 (103-151)||(25666701-25666749)
chr2 (105-172)||(37228524-37228592)
chr2 (118-234)||(4602890-4603008)
chr2 (105-148)||(37719860-37719903)
chr2 (103-162)||(43400157-43400216)
chr2 (104-158)||(11775859-11775913)
chr2 (97-147)||(23403802-23403852)
chr2 (106-148)||(28898061-28898103)
chr2 (204-249)||(8009522-8009567)
chr2 (138-249)||(25238284-25238399)
chr2 (196-249)||(30706390-30706443)
chr2 (105-162)||(31395542-31395599)
chr2 (109-162)||(31494236-31494289)
chr2 (88-164)||(2122804-2122880)
chr2 (181-249)||(4552847-4552915)
chr2 (110-158)||(24895368-24895416)
chr2 (122-178)||(32701513-32701569)
[»] chr8 (48 HSPs)
chr8 (109-249)||(34861199-34861337)
chr8 (92-248)||(1977181-1977340)
chr8 (103-242)||(17499247-17499389)
chr8 (103-249)||(8903876-8904025)
chr8 (88-249)||(16983403-16983567)
chr8 (103-234)||(32072121-32072255)
chr8 (88-254)||(24055927-24056096)
chr8 (103-249)||(9952765-9952913)
chr8 (103-249)||(5979904-5980052)
chr8 (103-249)||(36804846-36804995)
chr8 (107-216)||(8914799-8914911)
chr8 (88-245)||(28413881-28414040)
chr8 (88-249)||(35151736-35151900)
chr8 (102-249)||(6098784-6098932)
chr8 (109-228)||(43506566-43506687)
chr8 (104-249)||(13407330-13407479)
chr8 (88-234)||(41727439-41727588)
chr8 (104-252)||(45246459-45246610)
chr8 (117-180)||(31301153-31301216)
chr8 (105-180)||(35689506-35689581)
chr8 (100-228)||(17741555-17741686)
chr8 (109-177)||(6387591-6387659)
chr8 (103-245)||(7493353-7493503)
chr8 (110-211)||(35797426-35797530)
chr8 (103-148)||(13856506-13856551)
chr8 (180-247)||(5727335-5727403)
chr8 (103-234)||(14236362-14236496)
chr8 (103-147)||(16441919-16441963)
chr8 (103-249)||(17915840-17915985)
chr8 (103-162)||(16314372-16314431)
chr8 (190-248)||(5095768-5095826)
chr8 (109-206)||(17716881-17716981)
chr8 (104-162)||(23685156-23685214)
chr8 (107-180)||(1961310-1961383)
chr8 (103-172)||(7599509-7599578)
chr8 (90-242)||(11962696-11962850)
chr8 (109-162)||(45218614-45218667)
chr8 (118-249)||(9193421-9193555)
chr8 (104-148)||(44709296-44709340)
chr8 (103-178)||(9192025-9192100)
chr8 (105-163)||(29011079-29011137)
chr8 (140-249)||(34952504-34952616)
chr8 (88-158)||(39023439-39023509)
chr8 (99-140)||(14195225-14195266)
chr8 (103-148)||(16441828-16441873)
chr8 (107-147)||(9905839-9905879)
chr8 (126-249)||(13214542-13214668)
chr8 (90-126)||(28700564-28700600)
[»] chr1 (66 HSPs)
chr1 (88-249)||(26980269-26980433)
chr1 (104-245)||(19101612-19101756)
chr1 (102-243)||(41948159-41948303)
chr1 (88-249)||(6133632-6133795)
chr1 (109-248)||(2225254-2225396)
chr1 (102-238)||(33193073-33193212)
chr1 (103-234)||(29673499-29673633)
chr1 (88-248)||(25543349-25543511)
chr1 (119-249)||(30678918-30679051)
chr1 (107-249)||(28218053-28218200)
chr1 (88-241)||(10659784-10659940)
chr1 (103-249)||(32211791-32211940)
chr1 (88-249)||(11987635-11987799)
chr1 (117-234)||(41958121-41958241)
chr1 (103-234)||(44271942-44272076)
chr1 (88-249)||(8899023-8899187)
chr1 (103-249)||(15928579-15928726)
chr1 (120-249)||(8741230-8741362)
chr1 (103-249)||(14094007-14094157)
chr1 (103-245)||(37552962-37553105)
chr1 (115-179)||(50539160-50539224)
chr1 (87-249)||(27570233-27570398)
chr1 (105-249)||(41095615-41095763)
chr1 (107-177)||(50773193-50773263)
chr1 (103-180)||(32848662-32848739)
chr1 (105-177)||(11135765-11135837)
chr1 (105-177)||(11430467-11430539)
chr1 (103-202)||(49730888-49730990)
chr1 (104-249)||(13114676-13114825)
chr1 (103-162)||(18157062-18157121)
chr1 (111-234)||(35336896-35337018)
chr1 (109-180)||(41918025-41918096)
chr1 (115-244)||(15468256-15468388)
chr1 (104-162)||(15523235-15523293)
chr1 (104-162)||(15531229-15531287)
chr1 (196-246)||(21466630-21466680)
chr1 (104-162)||(22540393-22540451)
chr1 (115-228)||(45179274-45179390)
chr1 (109-162)||(4578674-4578727)
chr1 (189-249)||(39974207-39974267)
chr1 (88-198)||(3872692-3872804)
chr1 (190-249)||(16948536-16948595)
chr1 (88-225)||(931383-931523)
chr1 (106-148)||(13388361-13388403)
chr1 (99-141)||(24886057-24886099)
chr1 (110-202)||(37525560-37525655)
chr1 (109-181)||(43851113-43851185)
chr1 (192-243)||(12767341-12767392)
chr1 (103-162)||(14341018-14341077)
chr1 (115-162)||(15660929-15660976)
chr1 (105-248)||(28109894-28110040)
chr1 (103-162)||(44739142-44739201)
chr1 (106-145)||(50424980-50425019)
chr1 (106-148)||(11135853-11135895)
chr1 (85-198)||(31074722-31074838)
chr1 (117-162)||(9165340-9165385)
chr1 (117-162)||(13388436-13388481)
chr1 (99-140)||(19078931-19078972)
chr1 (99-140)||(19126819-19126860)
chr1 (103-140)||(28274810-28274847)
chr1 (110-162)||(5602657-5602709)
chr1 (108-180)||(36566925-36566997)
chr1 (213-245)||(36567027-36567059)
chr1 (213-249)||(39019704-39019740)
chr1 (88-144)||(39039470-39039526)
chr1 (117-243)||(39499433-39499564)
[»] chr5 (36 HSPs)
chr5 (106-249)||(28490729-28490875)
chr5 (117-234)||(10141998-10142118)
chr5 (118-249)||(5413741-5413878)
chr5 (103-249)||(34368384-34368533)
chr5 (103-228)||(28434846-28434972)
chr5 (103-249)||(41105577-41105726)
chr5 (104-247)||(30325883-30326029)
chr5 (89-249)||(37455359-37455525)
chr5 (103-228)||(17537130-17537258)
chr5 (121-242)||(41330407-41330531)
chr5 (88-246)||(34384701-34384862)
chr5 (104-252)||(27592456-27592607)
chr5 (117-226)||(43405431-43405543)
chr5 (105-177)||(42224673-42224745)
chr5 (109-219)||(10253124-10253232)
chr5 (88-249)||(28223783-28223947)
chr5 (88-249)||(28611785-28611949)
chr5 (109-218)||(39246638-39246750)
chr5 (115-172)||(25564033-25564090)
chr5 (105-162)||(40971550-40971607)
chr5 (103-234)||(25710494-25710628)
chr5 (143-249)||(1923559-1923668)
chr5 (88-166)||(2525583-2525661)
chr5 (140-228)||(14553573-14553664)
chr5 (134-249)||(25919266-25919384)
chr5 (103-150)||(1649574-1649621)
chr5 (109-180)||(13456244-13456315)
chr5 (105-151)||(4959304-4959350)
chr5 (105-162)||(6263909-6263966)
chr5 (103-180)||(43541875-43541952)
chr5 (105-149)||(4959391-4959435)
chr5 (104-140)||(7584863-7584899)
chr5 (99-147)||(16875377-16875425)
chr5 (106-162)||(17568799-17568855)
chr5 (127-202)||(31885885-31885963)
chr5 (108-156)||(32050413-32050461)
[»] scaffold0018 (1 HSPs)
scaffold0018 (117-249)||(27850-27985)
[»] scaffold0543 (1 HSPs)
scaffold0543 (103-178)||(9688-9763)
[»] scaffold0492 (1 HSPs)
scaffold0492 (103-178)||(11234-11309)
[»] scaffold0204 (1 HSPs)
scaffold0204 (105-180)||(26941-27016)
[»] scaffold0005 (1 HSPs)
scaffold0005 (103-159)||(296860-296916)
[»] scaffold0838 (1 HSPs)
scaffold0838 (108-166)||(2251-2309)
[»] scaffold0832 (1 HSPs)
scaffold0832 (108-166)||(2282-2340)


Alignment Details
Target: chr6 (Bit Score: 104; Significance: 1e-51; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 34905360 - 34905509
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| | |||||||||||||   |||||||| ||||||||||    
T  34905360 aacactctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacccacaatgattt 34905459  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| ||| |||| |||||||||||||||||||||||||||||||||||||    
T  34905460 aaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttg 34905509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 5106308 - 5106471
Alignment:
Q  89 aacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtag 185  Q
    ||||||||| ||  |||||| ||||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||| || ||||||||||   ||||     
T  5106308 aacactcacttttcaacactttctctaacactcacttttttattggataaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgtac 5106407  T
Q  186 acctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| |||| |||||||| ||| || | ||||| |||||||||| ||||||||||||| ||||||    
T  5106408 acccacaaggatttaaaccaataatagagtgaatattagagagtgtgttcaaaagagggtgttg 5106471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 89 - 252
Target Start/End: Complemental strand, 10133328 - 10133162
Alignment:
Q  89 aacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtag 185  Q
    ||||||||| ||  ||||||||||||||||||||||| |||| |||||||||| | ||||||| |||||||||| ||  |||||||||||||   |||||    
T  10133328 aacactcacttttcaacactctctctaacactcactcatttattggatgaaattattgtatgtcccaccactttatgggggttcaattttcaaagtgtag 10133229  T
Q  186 acctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttgata 252  Q
    | | ||||||||||||| ||| || | ||||||||||| || | || ||||||||||||||||||||    
T  10133228 aaccacaatgatttaaaccaataaaagagtgagtattaaagtgagtattcaaaagagagtgttgata 10133162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 88 - 234
Target Start/End: Complemental strand, 31116295 - 31116146
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||||||||||||||| |||||||| || |||||||||||||||||||| |||| |||||||||  |||| |||| ||   ||||    
T  31116295 caacactcacttttgaacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgta 31116196  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgtt 234  Q
     ||| ||||||||||||| ||| |||| |||||||||||||||| |||||    
T  31116195 aacccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 31116146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 445842 - 445976
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||| |||||| |||||||| ||||| ||||||||||||||||||||  ||||||||||||| |||||||||||||   | ||||   ||||||||||    
T  445842 aacactatctctagcactcacttttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttcaattttcaaagtctagagtcacaatgattt 445941  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgtt 234  Q
    ||| ||| |||| | |||||||||||||| |||||    
T  445942 aaaccaataagagaatgagtattagagagagtgtt 445976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 134 - 249
Target Start/End: Complemental strand, 16852098 - 16851980
Alignment:
Q  134 gatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagaggg 230  Q
    |||||||| ||||||||| ||||||||||||   |||||||||||||   |||||||| ||||||||||||| ||| |||| |||| ||||||| ||||     
T  16852098 gatgaaataaatgtatgtcccaccactttgtaggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtattagggagga 16851999  T
Q  231 tgttcaaaagagagtgttg 249  Q
    |||||||||||||||||||    
T  16851998 tgttcaaaagagagtgttg 16851980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 242
Target Start/End: Original strand, 21987317 - 21987458
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattta 200  Q
    ||||||||| || |||||||| ||||| |||||||||||||||||| | |||||||||| ||   |||| |||| ||   |||||| |  ||||||||||    
T  21987317 acactctctttagcactcactattttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgattta 21987416  T
Q  201 aatcaacaagaaagtgagtattagagagggtgttcaaaagag 242  Q
    || ||| ||||||||||||||||||||| |||||||||||||    
T  21987417 aaccaataagaaagtgagtattagagagagtgttcaaaagag 21987458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 1392640 - 1392800
Alignment:
Q  89 aacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtag 185  Q
    ||||||||| || |||||||||||  | |||||  | ||||| ||||||||||||||||||||  ||| ||||||| |  |||||||||| |   |||||    
T  1392640 aacactcactttttaacactctct--agcactctattttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag 1392737  T
Q  186 acctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
     || ||||||||||||| ||| |||| ||||||||||||| |||||||||||||||||||||||    
T  1392738 ccc-acaatgatttaaaccaataagagagtgagtattagatagggtgttcaaaagagagtgttg 1392800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 2675930 - 2676053
Alignment:
Q  114 taacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgtagacctacaatgatttaaatcaacaag 210  Q
    ||||| ||||||||||| || ||||| ||||||||||| |||||||||||| | |||| |||||||   ||||||||| |||||| |||||| ||| ||     
T  2675930 taacattcactcttttattgaatgaattcaatgtatgtcccaccactttgtttaggtttaattttcaaaatgtagacccacaatggtttaaaccaataaa 2676029  T
Q  211 aaagtgagtattagagagggtgtt 234  Q
    |||||||||||||||||| |||||    
T  2676030 aaagtgagtattagagagagtgtt 2676053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 12780879 - 12780773
Alignment:
Q  139 aatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttc 235  Q
    |||||||||||||  ||| |||||||||||||||||||||||   |||||| | ||||||||||||| ||| |||  | ||| |||||||||||||||||    
T  12780879 aatcaatgtatgtctcactactttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagggaatgaatattagagagggtgttc 12780780  T
Q  236 aaaagag 242  Q
    |||||||    
T  12780779 aaaagag 12780773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 126 - 248
Target Start/End: Complemental strand, 32112850 - 32112725
Alignment:
Q  126 ttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtatt 222  Q
    ||||| ||||||||||||||| ||||  ||||| ||||||| ||||  |||||||   |||||| | ||||||||||||| ||| |||| ||||| ||||    
T  32112850 ttttattggatgaaatcaatgcatgtcacaccattttgtgtgggttttattttcaaagtgtagatccacaatgatttaaaacaataagagagtgaatatt 32112751  T
Q  223 agagagggtgttcaaaagagagtgtt 248  Q
    ||||||  ||||||||||||||||||    
T  32112750 agagagaatgttcaaaagagagtgtt 32112725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 31443983 - 31444132
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||| | ||||||||| ||||||| |||||||||| ||| ||||| |||||| ||||||| |||||||||||||   ||| |||  |||| |||||    
T  31443983 aacactctttttaacactcattcttttattggatgaaattaatttatgttccaccattttgtgtcggttcaattttcaaagtgttgactcacaaggattt 31444082  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||  |  | |||| ||||||||||  ||||||| |||||||||||    
T  31444083 aaattaatgaacacgtgaatattagagagaatgttcaagagagagtgttg 31444132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 12753931 - 12753767
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||||||| | || || ||||||||| | ||||| ||||  ||| |||| |||||||||||||| ||||| |||||||   ||||    
T  12753931 caacactcacttttgaacactctttatagcaatcactctttcattggataaaatacatgcatgtcccaccactttgtgtgggttctattttcagggtgta 12753832  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
     ||  |||||||||||||  || || | || ||||||||||||| ||||| ||||||||||||||    
T  12753831 cactcacaatgatttaaactaataaaagagcgagtattagagagagtgttgaaaagagagtgttg 12753767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 249
Target Start/End: Complemental strand, 19090369 - 19090221
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta-gacctacaatgattta 200  Q
    ||||||||||| ||| |||||||||| ||| |||||||||||||||| |||||||||| ||| ||||| |||| ||   |||| | |||||| ||| ||     
T  19090369 cactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgaattc 19090270  T
Q  201 aatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    || ||| || | |||||||  ||||||| ||| ||||||||||||||||    
T  19090269 aaccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttg 19090221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 35128879 - 35128802
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||||||||||| || ||||||||||| ||| | |||||||||||||| |||||||||| ||| ||||| |||||||    
T  35128879 aacactctctctagcagtcactcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttccattttca 35128802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 249
Target Start/End: Complemental strand, 16187557 - 16187441
Alignment:
Q  132 tggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagag 228  Q
    ||||| ||||||||||||   |||||| |||||||  ||||||||||||   |||||||||||||| ||||||| ||| |||  |||||||||||||||     
T  16187557 tggattaaatcaatgtatc--ccaccattttgtgtaagttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattagaga- 16187461  T
Q  229 ggtgttcaaaagagagtgttg 249  Q
     ||||| ||||||||||||||    
T  16187460 -gtgttgaaaagagagtgttg 16187441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 249
Target Start/End: Complemental strand, 16187775 - 16187659
Alignment:
Q  132 tggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagag 228  Q
    ||||| ||||||||||||   |||||| |||||||  ||||||||||||   |||||||||||||| ||||||| ||| |||  |||||||||||||||     
T  16187775 tggattaaatcaatgtatc--ccaccattttgtgtaagttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattagaga- 16187679  T
Q  229 ggtgttcaaaagagagtgttg 249  Q
     ||||| ||||||||||||||    
T  16187678 -gtgttgaaaagagagtgttg 16187659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 4595766 - 4595843
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||||||||||| |||||||||||||| ||  ||||||||||||||||  ||||||||| | | ||||| |||||||    
T  4595766 aacactctctctagcactcactcttttattgagtgaaatcaatgtatgtctcaccactttttatgggttccattttca 4595843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 227
Target Start/End: Original strand, 32122819 - 32122946
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||| || | ||||||||  |||| |||||||||||||| ||||| |||||| ||||||   ||||||||||||   |||||||| ||||||||||    
T  32122819 aacactctttccaccactcacttatttattggatgaaatcaatatatgtcccaccattttgtgggagttcaattttcaaagtgtagacccacaatgattt 32122918  T
Q  200 aaatcaacaagaaagtgagtattagaga 227  Q
    ||  ||| || ||||||| || ||||||    
T  32122919 aagccaataaaaaagtgaataatagaga 32122946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 10060883 - 10061033
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta-gacctacaatgatt 198  Q
    |||||||| | ||||| ||||||||||| |   |||||||||||||||| || ||||||| ||| ||||| |||||||   |||| | |||||| ||||     
T  10060883 aacactctttataacaatcactcttttattatgtgaaatcaatgtatgtcccgccactttatgtgggttccattttcaaagtgtaggtcctacattgatc 10060982  T
Q  199 taaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    | |  ||| || ||||||||| |||||||| ||| ||||||||||||||||    
T  10060983 tcacccaataaaaaagtgagtgttagagagagtgctcaaaagagagtgttg 10061033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 17144822 - 17144725
Alignment:
Q  108 tctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaa 202  Q
    |||||||| |||| ||| ||||| || ||||||||||| ||||| |||||  ||||||| |||| ||||||||   |||||||| |||||||||||||    
T  17144822 tctctctagcacttactattttattgaatgaaatcaatatatgttccaccgttttgtgtaggttaaattttcaaagtgtagacccacaatgatttaaa 17144725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 12327361 - 12327287
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    ||||||||||||| || ||||||||||| |||||  ||||||||||||| | |||| ||||||| ||||| ||||    
T  12327361 aacactctctctagcagtcactcttttattggatagaatcaatgtatgtcctaccattttgtgtgggttctattt 12327287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 6531451 - 6531395
Alignment:
Q  106 actctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||||| | |||||||||||||| ||| |||||||||||||||| |||| |||||    
T  6531451 actctctccagcactcactcttttattgggtgaaatcaatgtatgtcccactacttt 6531395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 8441993 - 8441953
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatca 143  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  8441993 aacactctctctaacactcactcatttattggatgaaatca 8441953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 8450797 - 8450757
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatca 143  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  8450797 aacactctctctaacactcactcatttattggatgaaatca 8450757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 2931585 - 2931660
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaatttt 178  Q
    ||||||||||||| || || ||  |||| | |||||||||||||||||| | |||| |||||| ||||||||||||    
T  2931585 aacactctctctatcattcgcttatttatttgatgaaatcaatgtatgtcctaccattttgtggtggttcaatttt 2931660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 12690276 - 12690335
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||||||||||||  |||||||| |||||||||| |||| ||||  |||||||||    
T  12690276 aacactctctctaacacttgctcttttattggatgaaattaatgcatgtctcaccacttt 12690335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 373558 - 373513
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    |||||||||||||||||| ||| ||||| ||||| |||||||||||    
T  373558 aacactctctctaacacttactattttattggataaaatcaatgta 373513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 9940382 - 9940427
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    |||| |||||||| |||||||||||||| ||| |||||||||||||    
T  9940382 aacattctctctagcactcactcttttattgggtgaaatcaatgta 9940427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 8441939 - 8441857
Alignment:
Q  169 gttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgtt 248  Q
    ||||||||||||   ||||||||| |||| || |||| ||| || | |||||||||||||||| |||||||||| | ||||||    
T  8441939 gttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttcaaaaaatagtgtt 8441857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 8450743 - 8450661
Alignment:
Q  169 gttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgtt 248  Q
    ||||||||||||   ||||||||| |||| || |||| ||| || | |||||||||||||||| |||||||||| | ||||||    
T  8450743 gttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttcaaaaaatagtgtt 8450661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 12488200 - 12488156
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgt 147  Q
    |||||| | ||||| ||||||||||||| ||||||||||||||||    
T  12488200 aacactttttctaatactcactcttttattggatgaaatcaatgt 12488156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 19737589 - 19737545
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtat 149  Q
    ||||||||||| |||||||||||| | ||| ||||||||||||||    
T  19737589 cactctctctagcactcactctttaattgggtgaaatcaatgtat 19737545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 32439486 - 32439538
Alignment:
Q  89 aacactcaccttctaacactctctctaacactcactcttttactggatgaaat 141  Q
    ||||||| | ||| |||||||||||||||||||||||| ||| ||| ||||||    
T  32439486 aacactctctttcaaacactctctctaacactcactctcttattgggtgaaat 32439538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 6e-47; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 28529262 - 28529424
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  ||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| ||||  |||||||||||||   ||||    
T  28529262 caacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactgtgtg--ggttcaattttcaaagtgta 28529359  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||    
T  28529360 gacccacaatgatttaaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttg 28529424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 20493616 - 20493452
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  ||||||||||||||||||||||| |||| |||||||||||||||||||| | |||||||||||  |||||||| ||||   ||||    
T  20493616 caacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgtatgtcctaccactttgtgggggttcaatattcaaagtgta 20493517  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||||||||||| ||| |||| |||||||| ||||||| ||||||||||||||||||||    
T  20493516 gacccacaatgatttaaaccaataagagagtgagtaatagagagagtgttcaaaagagagtgttg 20493452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 37776874 - 37776710
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||||| |||| | |||||||||||||| | |||||||||||||||||| | |||||||||||| |||||||||||||   ||||    
T  37776874 caacactcacttttcaacactttctccagcactcactcttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgta 37776775  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||||||||||||||||| ||  |||| |||||||||||||||||||||||| || |||||||||    
T  37776774 gacctacaatgatttaaaccactaagagagtgagtattagagagggtgttcataaaagagtgttg 37776710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 41452066 - 41451902
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||||  ||||||  ||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||    |||    
T  41452066 caacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagta 41451967  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||||||||||| ||| |||| |||||||||||||||| ||||||||||||||||||||    
T  41451966 gacccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttg 41451902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 24734714 - 24734878
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||||  ||||||  ||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||    |||    
T  24734714 caacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagta 24734813  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    | || ||||||||||||| ||| |||| |||||||||||||||| ||||||||||||||||||||    
T  24734814 ggcccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttg 24734878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 52124127 - 52123963
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| || |||| ||||||||| ||||||||  |||  |||||||||| ||||||||| |||| | ||||||  |||||||||||||   ||||    
T  52124127 caacactcactttttaacgctctctctagcactcacttatttgttggatgaaattaatgtatgtcccactattttgtgggggttcaattttcaaagtgta 52124028  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  52124027 gacccacaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttg 52123963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 18427294 - 18427164
Alignment:
Q  115 aacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaaga 211  Q
    ||||||||||| |||| |||||||||||||||||||| |||||| ||||||| ||||| |||||||   |||||||| ||||||||||||| ||| ||||    
T  18427294 aacactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgtagacccacaatgatttaaaccaataaga 18427195  T
Q  212 aagtgagtattagagagggtgttcaaaagag 242  Q
     ||||||||||||||||||||||||| ||||    
T  18427194 gagtgagtattagagagggtgttcaagagag 18427164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 5452231 - 5452069
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgta 184  Q
    |||||||||| ||  |||||||||| ||||| ||||||||||| |||||||||||||||||| | |||||||||||||| | ||||||||||    ||||    
T  5452231 caacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtggattcaattttctaagtgta 5452132  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||||  ||| |||||||||||| |||| || ||||||| ||||| ||||||||||||||||||||    
T  5452131 gacc--caaggatttaaatcaataagagagcgagtattggagagagtgttcaaaagagagtgttg 5452069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 104 - 246
Target Start/End: Original strand, 20791321 - 20791466
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattta 200  Q
    ||||||||| || |||||||| ||||| |||||||||||||||||||| |||||||||| ||   |||| |||| ||   |||||| |  ||||||||||    
T  20791321 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgattta 20791420  T
Q  201 aatcaacaagaaagtgagtattagagagggtgttcaaaagagagtg 246  Q
    || ||| ||||||||||||||||||||| |||||||||||||||||    
T  20791421 aaccaataagaaagtgagtattagagagagtgttcaaaagagagtg 20791466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 27243069 - 27243219
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta-gacctacaatgatt 198  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| |||| |||||||||| ||| ||||| |||| ||   |||| |||| ||| |||||    
T  27243069 aacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaagtgtatgacccacattgatt 27243168  T
Q  199 taaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||  |||  ||| ||||||||||||| || ||||||||||||||||||||    
T  27243169 taacccaatgagagagtgagtattagaaagagtgttcaaaagagagtgttg 27243219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 46160977 - 46161117
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatca 205  Q
    ||||||| |||||||||||||| ||||||||||||||  |||| | |||||||||||||||||| |||| ||   |||||| | | ||||||||||| ||    
T  46160977 ctctctagcactcactcttttattggatgaaatcaatacatgtccgaccactttgtgttggttctatttccaaagtgtagatccataatgatttaaacca 46161076  T
Q  206 acaagaaagtgagtattagagagggtgttcaaaagagagtg 246  Q
    | |||| |||||||||||||||| |||| ||| ||||||||    
T  46161077 ataagagagtgagtattagagagagtgtccaagagagagtg 46161117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 26310602 - 26310500
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||| |||||| ||| |||||||||||||||||   |||||||| | ||||||||    
T  26310602 aacactctctctagcacttactcttttattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgtagacccataatgattt 26310503  T
Q  200 aaa 202  Q
    |||    
T  26310502 aaa 26310500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 46450095 - 46450224
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccac-tttgtgttggttcaattttca---tgtagacctacaatgatttaaatc 204  Q
    ||||||| |||||||||||||| | |||| ||||||||||||| ||||||| ||||||| ||||| |||| ||   |||||||| ||||||||||||| |    
T  46450095 ctctctagcactcactcttttattagatggaatcaatgtatgtcccaccacttttgtgtgggttctatttgcaaagtgtagacccacaatgatttaaacc 46450194  T
Q  205 aacaagaaagtgagtattagagagggtgtt 234  Q
    || |||| |||||||||||||||| |||||    
T  46450195 aataagagagtgagtattagagagagtgtt 46450224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 29588869 - 29588746
Alignment:
Q  123 ctcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagt 219  Q
    |||||||| ||||| |||||||||||||| |   |||||| |||  ||||||||||||   |||||||| ||||||||||||||||| |||| |||||||    
T  29588869 ctcttttattggataaaatcaatgtatgtcctttcactttatgtgagttcaattttcaaagtgtagacccacaatgatttaaatcaataagagagtgagt 29588770  T
Q  220 attagagagggtgttcaaaagaga 243  Q
     ||| |||| ||||||||||||||    
T  29588769 gttatagagagtgttcaaaagaga 29588746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 243
Target Start/End: Original strand, 48351445 - 48351603
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||  || ||||||||||| ||| || |||||||||| ||||| |||||||| |||||  ||| ||||||||| |||||||||||||   ||||    
T  48351445 caacactcagtttttaacactctctttaagacacactcttttattggataaaatcaatatatgtctcactactttgtgtgggttcaattttcaaagtgta 48351544  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagaga 243  Q
     | | | ||||||||||||||| |||| |  ||||||||||||   |||||||||||||    
T  48351545 tatccataatgatttaaatcaataagagaaagagtattagagaaaatgttcaaaagaga 48351603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 249
Target Start/End: Original strand, 14236044 - 14236192
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattta 200  Q
    ||||||||| || |||||||| ||||| |||||||||||||| ||||| |||||||||| ||   |||| |||| ||   |||||| | ||||| |||||    
T  14236044 acactctctttagcactcactattttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgtagatccacaataattta 14236143  T
Q  201 aatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
     | ||| || ||||||||||||||| || |||||||||| |||||||||    
T  14236144 gaccaataaaaaagtgagtattagaaagagtgttcaaaacagagtgttg 14236192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 248
Target Start/End: Original strand, 29755509 - 29755672
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||| ||||| |||||| ||||||||||  | ||  ||||||| |||||  ||| ||||||||| |||||||||||||   ||||    
T  29755509 caacactcacttttcaacattctctttaacacccactcttttatcgaatagaatcaatatatgtttcactactttgtgtgggttcaattttcaaagtgta 29755608  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgtt 248  Q
    || | ||||||||||||| ||| ||||  ||  ||||||||| | |||||||||||||||||||    
T  29755609 gatcaacaatgatttaaaccaataagagggtaggtattagagggagtgttcaaaagagagtgtt 29755672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 46237200 - 46237128
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||| |||||||||| ||| ||||| ||||    
T  46237200 cactctctctagcaatcactcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttccattt 46237128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 138793 - 138921
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaatttt---catgtagacctacaatgatttaaatca 205  Q
    ||||||| |||||||||||||| || |||||||||||||||||  ||||| ||||| |   |||||||||    ||||| || |||||||||||||||||    
T  138793 ctctctagcactcactcttttattgaatgaaatcaatgtatgtctcaccattttgtatgtattcaatttttaaaatgtaaacttacaatgatttaaatca 138892  T
Q  206 acaagaaagtgagtattagagagggtgtt 234  Q
    | || | ||| ||||||| ||||||||||    
T  138893 ataaaagagtaagtattaaagagggtgtt 138921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 241
Target Start/End: Complemental strand, 45515666 - 45515512
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||| ||||| || |||||||||||| |||||||||| ||||| |||||||||||||||||| | ||| |||   ||||  ||||||||||||   ||||    
T  45515666 caacgctcactttttaacactctctccaacactcactattttattggatgaaatcaatgtatatcccatcacagagtgtgagttcaattttcaaagtgta 45515567  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaaga 241  Q
    ||||||  ||||||| || ||| |||| ||||| ||||||||||| | |||||||||    
T  45515566 gaccta-tatgattt-aaccaataagagagtgaatattagagaggttattcaaaaga 45515512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 252
Target Start/End: Complemental strand, 50156784 - 50156664
Alignment:
Q  135 atgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggt 231  Q
    ||||||| ||||||||| |||| |||||| |  ||||||||||| |   |||||||| ||||||||||||| ||| |||| ||||||||||| | || ||    
T  50156784 atgaaattaatgtatgttccacaactttgcgggggttcaattttaaaagtgtagacccacaatgatttaaaccaataagagagtgagtattacaaagagt 50156685  T
Q  232 gttcaaaagagagtgttgata 252  Q
    |||||||||| ||||| ||||    
T  50156684 gttcaaaagaaagtgtcgata 50156664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 41707593 - 41707520
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaatttt 178  Q
    |||||||||||||||||||||| | | ||||| ||||||||||||||  || |||||||||| |||||||||||    
T  41707593 cactctctctaacactcactctctcattggataaaatcaatgtatgtttcatcactttgtgtgggttcaatttt 41707520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 46575972 - 46576049
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||||||||| |||||||||||| ||| ||| ||||| |||||||||| |||||||||| ||| ||||| |||||||    
T  46575972 aacactctctcaaacactcactctcttattggctgaaaccaatgtatgtcccaccactttttgtgggttccattttca 46576049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 228
Target Start/End: Complemental strand, 10948730 - 10948588
Alignment:
Q  89 aacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtag 185  Q
    ||||||||| ||  |||||| |||| | ||||||||  |||| |||| || || ||||||||| ||||||||||||||| |||||||||| |   ||||     
T  10948730 aacactcacttttcaacactttctcaagcactcacttctttattggacgatattaatgtatgttccaccactttgtgtttgttcaatttttaaagtgtaa 10948631  T
Q  186 acctacaatgatttaaatcaacaagaaagtgagtattagagag 228  Q
    ||| ||||||||||||| ||| || | ||||||||||| ||||    
T  10948630 acccacaatgatttaaaccaataaaagagtgagtattaaagag 10948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 37600284 - 37600212
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    ||||||||||| ||| |||||||||| ||| |||||||||||||||| |||||||||| ||| ||||| ||||    
T  37600284 cactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 37600212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 24748933 - 24748976
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  24748933 cactctctctaacactcactcttttattggatgaaatcaatgta 24748976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 30624661 - 30624732
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    |||||||||||||||||||||| || || |||| |||||||||  |||||||||||||  ||||||||||||    
T  30624661 ctctctaacactcactcttttattgaataaaattaatgtatgtttcaccactttgtgtgagttcaattttca 30624732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 54141047 - 54140972
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||||||||| ||||||||| |||| ||| |||||||||||||||| ||||||||||  || ||||| |||||||    
T  54141047 cactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccaccactttacgtgggttccattttca 54140972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 249
Target Start/End: Complemental strand, 8825130 - 8824986
Alignment:
Q  108 tctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatc 204  Q
    ||||||||  |||||| |||||| | |||||||||||| ||||| |||||| ||| ||  |||||||||||||   | || ||  ||||| ||||||| |    
T  8825130 tctctctagtactcacccttttattagatgaaatcaatatatgtcccaccattttatgcgggttcaattttcaaagtctacactcacaataatttaaacc 8825031  T
Q  205 aacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    || |||| ||||||||||| |||| |||||||||| ||| |||||    
T  8825030 aataagagagtgagtattaaagagagtgttcaaaacagaatgttg 8824986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 22604570 - 22604686
Alignment:
Q  89 aacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgtag 185  Q
    |||||| || || ||| ||||||| |||||||||||| |||| ||||| |||| ||||||||| |||||| ||||||   |||||||||||   ||||||    
T  22604570 aacacttactttttaatactctctttaacactcactcatttattggataaaattaatgtatgtcccaccattttgtgggagttcaattttcaaaatgtag 22604669  T
Q  186 acctacaatgatttaaa 202  Q
    ||  |||||||||||||    
T  22604670 actcacaatgatttaaa 22604686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 50661678 - 50661604
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    |||||||||||||||||| ||||||||| | ||| ||||||||| |||| |||||||||| ||| ||||| ||||    
T  50661678 aacactctctctaacacttactcttttattagataaaatcaatgcatgtcccaccactttatgtgggttccattt 50661604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 55452156 - 55452037
Alignment:
Q  118 actcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaag 214  Q
    ||||||||||||| |||||| |||  |||||||| |||||||||||||| ||||| |||| ||   |||||||  | ||||||||||| |||  | | ||    
T  55452156 actcactcttttattggatggaatacatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagactcataatgatttaaaccaatgaaagag 55452057  T
Q  215 tgagtattagagagggtgtt 234  Q
    |||||||||||||| |||||    
T  55452056 tgagtattagagagagtgtt 55452037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 13639412 - 13639464
Alignment:
Q  89 aacactcaccttctaacactctctctaacactcactcttttactggatgaaat 141  Q
    ||||||| | |||||||||||||||||||| ||||||||||| ||||||||||    
T  13639412 aacactctctttctaacactctctctaacagtcactcttttattggatgaaat 13639464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 19345132 - 19345054
Alignment:
Q  127 tttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaa 202  Q
    |||| |||||||||||||||||||| ||||||||||||   |||||||||||||   |||||||  |||||||||||||    
T  19345132 tttattggatgaaatcaatgtatgtcccaccactttgttggggttcaattttcaaattgtagactcacaatgatttaaa 19345054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 43016529 - 43016585
Alignment:
Q  192 aatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgtt 248  Q
    ||||||||||||||| |||| ||||||||||| || |||||||||||| ||||||||    
T  43016529 aatgatttaaatcaataagagagtgagtattacagtgggtgttcaaaatagagtgtt 43016585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 119 - 249
Target Start/End: Original strand, 2009035 - 2009167
Alignment:
Q  119 ctcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagt 215  Q
    ||||||||||||   |||||||| ||||||||| |||||||||| ||| | |||| |||| |   |||||||  ||||| ||||||||||| || ||| |    
T  2009035 ctcactcttttatcagatgaaattaatgtatgt-ccaccactttatgtagtttcagtttttaaagtgtagactcacaataatttaaatcaataaaaaaat 2009133  T
Q  216 gagtattagagagggtgttcaaaagagagtgttg 249  Q
    || ||||||||||| |||| |||||||| |||||    
T  2009134 gaatattagagaggatgtttaaaagagaatgttg 2009167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 249
Target Start/End: Complemental strand, 15790525 - 15790377
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||| | ||||||||| |||  |||| ||||| ||||||||||||||  ||||| ||| || |||  |||||||||   ||||| || | ||||||||    
T  15790525 aacactttttctaacacttacttatttattggataaaatcaatgtatgtctcaccattttatggtgggacaattttcaaagtgtaggcc-ataatgattt 15790427  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| ||| |||| ||||||||||||||||  | ||||||| |||||||||    
T  15790426 aaaccaataagagagtgagtattagagagattattcaaaaaagagtgttg 15790377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 39186069 - 39186140
Alignment:
Q  181 tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttgata 252  Q
    |||||| || |||||||||||||||| |||| || | ||||| ||||| || ||||||||||||||||||||    
T  39186069 tgtagatctgcaatgatttaaatcaataagagagagggtattggagagagtattcaaaagagagtgttgata 39186140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 40716033 - 40715916
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaatttt---catgta 184  Q
    |||||||||| ||  ||||||||||||| ||||||||||||||   | |||||| ||||||||   || |||||||||| |||||||||||    ||||     
T  40716033 caacactcacttttcaacactctctctagcactcactcttttatatggtgaaattaatgtatgactcatcactttgtgtgggttcaatttttaaaatgtt 40715934  T
Q  185 gacctacaatgatttaaa 202  Q
    ||| ||||||||||||||    
T  40715933 gacatacaatgatttaaa 40715916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 2419539 - 2419481
Alignment:
Q  181 tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaa 239  Q
    |||||||| ||||||||||||| ||| |||||||||||||||| |||  ||||||||||    
T  2419539 tgtagacccacaatgatttaaaccaataagaaagtgagtattaaagaaagtgttcaaaa 2419481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 177
Target Start/End: Original strand, 13809107 - 13809179
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    ||||||||||||||  ||||||||||| ||||| |||||||||||||| |||||| ||| ||| ||||| ||||    
T  13809107 acactctctctaact-tcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccattt 13809179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 42780690 - 42780739
Alignment:
Q  99 ttctaacactctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||| |||||    
T  42780690 ttctaacactctctctaacactcattctcttattggatgaaatccatgta 42780739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 43657150 - 43657093
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||| |||||| |||||||| ||||| | |||||||||||||||||| ||||||||||    
T  43657150 cactttctctagcactcactattttatttgatgaaatcaatgtatgtcccaccacttt 43657093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 249
Target Start/End: Complemental strand, 24749062 - 24748916
Alignment:
Q  107 ctctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta-gacctacaatgatttaaa 202  Q
    |||||||||||||||| |||||||  || ||| |||||||||||| |||||| ||| ||| ||||| ||||  |   |||| | |||||| |||||| |     
T  24749062 ctctctctaacactcattcttttatggggtgatatcaatgtatgtcccaccattttatgtgggttccatttctaaagtgtaggtcctacattgatttcat 24748963  T
Q  203 tcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
     ||| || | ||||||| |||||||| ||| ||||||||||||||||    
T  24748962 ccaataaaagagtgagtgttagagagagtgctcaaaagagagtgttg 24748916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 29389184 - 29389108
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgt 164  Q
    |||||||||| ||  | ||||| || ||||||||||||||| | || || |||||||||||||| ||||||||||||    
T  29389184 caacactcacttttgagcactcactttaacactcactctttcattgaataaaatcaatgtatgtcccaccactttgt 29389108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 29235658 - 29235709
Alignment:
Q  90 acactcaccttctaacactctctctaacactcactcttttactggatgaaat 141  Q
    |||||| | |||||||||||||||||||||||||||| ||| ||| ||||||    
T  29235658 acactctctttctaacactctctctaacactcactctcttattgggtgaaat 29235709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 38928032 - 38928075
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||    
T  38928032 cactttctctaacactcactcttttattgggtgaaatcaatgta 38928075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 10769879 - 10769822
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||||| |||  ||||||||| | | |||||||||||||||| ||||||||||    
T  10769879 cactctctctatcaccgactcttttatttggtgaaatcaatgtatgtcccaccacttt 10769822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 49418479 - 49418426
Alignment:
Q  196 atttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||||||||||| |||| ||||| || |||||||  |||||||||||||||||||    
T  49418479 atttaaatcaataagagagtgaatactagagagaatgttcaaaagagagtgttg 49418426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 54187099 - 54187050
Alignment:
Q  90 acactcaccttctaacactctctctaacactcactcttttactggatgaa 139  Q
    |||||| | |||||||||||||||||||||||||||| ||| ||| ||||    
T  54187099 acactctctttctaacactctctctaacactcactctcttattgggtgaa 54187050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 21232664 - 21232604
Alignment:
Q  117 cactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    |||||| | ||||| ||| |||||||||||||||| |||||||||| ||| ||||| ||||    
T  21232664 cactcatttttttattgggtgaaatcaatgtatgttccaccactttatgtgggttccattt 21232604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 249
Target Start/End: Complemental strand, 27243090 - 27243054
Alignment:
Q  213 agtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  27243090 agtgagtgttagagagagtgttcaaaagagagtgttg 27243054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 29388685 - 29388611
Alignment:
Q  168 ggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaa 239  Q
    |||||||||||||   |||||||  |||||||||||| |||| |||| |||| || |||||||| ||||||||||    
T  29388685 ggttcaattttcaaagtgtagactcacaatgatttaagtcaataagagagtgggtgttagagagagtgttcaaaa 29388611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 36750960 - 36751028
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggtt 171  Q
    |||||||||  ||||||||||||| |||||| ||||||||| || |||| | |||||||| ||| ||||    
T  36750960 aacactctcattaacactcactctcttactgaatgaaatcagtgcatgtcctaccactttatgtaggtt 36751028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 48543314 - 48543262
Alignment:
Q  89 aacactcaccttctaacactctctctaacactcactcttttactggatgaaat 141  Q
    ||||||| | ||||||||||||||| |||||||||||| ||| ||| ||||||    
T  48543314 aacactctctttctaacactctctccaacactcactctcttattgggtgaaat 48543262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 52951531 - 52951475
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaa 144  Q
    |||||||| | || |||||||||||||| |||||||||| | | |||||||||||||    
T  52951531 caacactctctttttaacactctctctagcactcactctctcattggatgaaatcaa 52951475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 8108965 - 8109129
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  ||||||||||||| |||||||||||||| ||| |||||||||||||||| |||| | |||||||| ||||||||||||   ||||    
T  8108965 caacactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaattttcaaagtgta 8109064  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  8109065 gacccacaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttg 8109129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 43771135 - 43771299
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||||||||||||  ||||||||||||| |||||||||||||||||||| |||||||| ||||| |||||||||||||   ||||    
T  43771135 caacactcacttttgaacactctctctatgactcactcttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaattttcaaagtgta 43771234  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||||||||||| ||| |||| ||||||||||| |||||||||||||||||||| ||||    
T  43771235 gacccacaatgatttaaaccaataagagagtgagtattaaagagggtgttcaaaagagagcgttg 43771299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 90 - 249
Target Start/End: Original strand, 722168 - 722330
Alignment:
Q  90 acactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtaga 186  Q
    ||||||| |||  ||||||||||||| |||||||| ||||| ||||||||||||| |||||| ||||||||||||||  |||||||||| |   ||||||    
T  722168 acactcatctttcaacactctctctagcactcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 722267  T
Q  187 cctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    || ||||||||||||| ||| |||| |||||||||||||||| |||||||||||| |||||||    
T  722268 cccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 722330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 39471166 - 39471330
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  || ||||||| ||||||  ||||||||| | |||||||||||||||||| ||||||||||||||||||||||| ||||   ||||    
T  39471166 caacactcacttttaaatactctctttaacaccaactcttttattagatgaaatcaatgtatgtcccaccactttgtgttggttcaatcttcaaagtgta 39471265  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||||||||||| ||| |||| ||||||||||||||||  |||| ||||||||||||||    
T  39471266 gacccacaatgatttaaaccaataagagagtgagtattagagagaatgtttaaaagagagtgttg 39471330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 303 - 388
Target Start/End: Original strand, 11127963 - 11128048
Alignment:
Q  303 tgttttcgtgtttagtgatagtaatctgcgatgggggaaaattcaggtcttggtgctgataattgggagtttgcttcttgttcttc 388  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11127963 tgttttcgtttttagtgatagtaatctgccatgggggaaaattcaggtcttggtgctgataattgggagtttgcttcttgttcttc 11128048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 248
Target Start/End: Original strand, 50164405 - 50164567
Alignment:
Q  89 aacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtag 185  Q
    ||||||||| || |||||||||||||| ||||||||| |||| ||||| |||||||||||| | |||||| ||||||  |||||||||||||   |||||    
T  50164405 aacactcactttttaacactctctctagcactcactcatttattggataaaatcaatgtatctcccaccattttgtgggggttcaattttcaaagtgtag 50164504  T
Q  186 acctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgtt 248  Q
    ||  ||||||||||||| ||| ||||||||||| ||||||||| |||||||||||| ||||||    
T  50164505 actcacaatgatttaaaccaataagaaagtgagcattagagagagtgttcaaaagatagtgtt 50164567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 103 - 249
Target Start/End: Complemental strand, 754736 - 754587
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||| ||||||||||||||| ||||| |||||||| |||| |||||| ||||||||||||||  |||||||||| |   |||||||| ||||||||||    
T  754736 aacactttctctaacactcacttttttattggatgaactcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgattt 754637  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| ||| |||| |||||||||||||||| |||||||||||| |||||||    
T  754636 aaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 754587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 20454564 - 20454711
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    ||||||||||||| |||||||||||||| | ||| |||||||||||||| |||| |||||||||||||||||||||||   |||||| | ||||||||||    
T  20454564 aacactctctctagcactcactcttttattagataaaatcaatgtatgt-ccac-actttgtgttggttcaattttcaaagtgtagatccacaatgattt 20454661  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||||||| || | ||||||| |||||||| |||||||||||||| |||||    
T  20454662 aaatcaataacagagtgagtgttagagagagtgttcaaaagagaatgttg 20454711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 24834587 - 24834751
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| || | |||||||||||||| |||||  ||||| |||||| ||||||||||||| |||||| ||||||| |||||||||||||   ||||    
T  24834587 caacactcactttttgacactctctctaacgctcacatttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaagtgta 24834686  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||| ||||||| ||| |||| ||||| |||||||||| | ||| ||||||||||||||    
T  24834687 gacccacaataatttaaaccaataagagagtgactattagagagagagtttaaaagagagtgttg 24834751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 47009213 - 47009362
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||| |||| |||||||||||||| ||||| |||| ||||| |||  |||| ||||||||  ||||||||||||   ||||||   ||||||||||    
T  47009213 aacactctttctagcactcactcttttattggataaaattaatgtttgtctcaccgctttgtgtgagttcaattttcaaagtgtagatacacaatgattt 47009312  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| ||| |||||||||||||||||||||||||||||||||||| |||||    
T  47009313 aaaccaataagaaagtgagtattagagagggtgttcaaaagagaatgttg 47009362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 26361446 - 26361315
Alignment:
Q  121 cactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtga 217  Q
    |||||||||| |||||||| ||||||||||  |||||| ||||||| |||||||| ||||   |||||||| | ||||||||||| ||| |||  |||||    
T  26361446 cactcttttattggatgaagtcaatgtatgacccaccattttgtgtgggttcaatattcaaagtgtagacccataatgatttaaaccaataagtgagtga 26361347  T
Q  218 gtattagagagggtgttcaaaagagagtgttg 249  Q
    ||||||||||||||||||||||||||||||||    
T  26361346 gtattagagagggtgttcaaaagagagtgttg 26361315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 49242180 - 49242343
Alignment:
Q  89 aacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtag 185  Q
    ||||||||| ||  |||||||| ||||||| ||||| ||| | |||||||||||||| ||||| ||| |||||||||| |||||||||||||   |||||    
T  49242180 aacactcacttttgaacactctatctaacagtcactttttaattggatgaaatcaatatatgtcccatcactttgtgtgggttcaattttcaatgtgtag 49242279  T
Q  186 acctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |   ||||||||||||| ||| |||| | ||||||| | |||| ||||| ||||||||||||||    
T  49242280 attcacaatgatttaaaccaataagagaatgagtatcatagagagtgtttaaaagagagtgttg 49242343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 106 - 249
Target Start/End: Complemental strand, 34129553 - 34129407
Alignment:
Q  106 actctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaa 202  Q
    |||||||||| ||||||||||| || ||||||| |||||||||| | ||||||||||||||  ||||||||||||   ||| |||  |||||| ||||||    
T  34129553 actctctctagcactcactcttctattggatgagatcaatgtatatcccaccactttgtgtgtgttcaattttcaaagtgtggactcacaatggtttaaa 34129454  T
Q  203 tcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
     ||| || | |||||||||||||||  ||||||| ||||||||||||    
T  34129453 ccaataaaagagtgagtattagagattgtgttcagaagagagtgttg 34129407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 116 - 241
Target Start/End: Complemental strand, 24938558 - 24938430
Alignment:
Q  116 acactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaa 212  Q
    ||||||||||||||| |||||| ||||||||||||| |||||| ||||| | | ||||||||| |   |||||||||||||||||||||| ||| ||||     
T  24938558 acactcactcttttattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgtagacctacaatgatttaaaccaataagag 24938459  T
Q  213 agtgagtattagagagggtgttcaaaaga 241  Q
    ||| |||||||||||  ||||| ||||||    
T  24938458 agtaagtattagagaaagtgttgaaaaga 24938430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 11127716 - 11127774
Alignment:
Q  17 aaaaagagttaggttactatttcagctttataataagtatttaagatttaggaatgcta 75  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11127716 aaaaaaagttaggttactatttcagctttataataagtatttaagatttagaaatgcta 11127774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 249
Target Start/End: Original strand, 19447161 - 19447305
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtag-acctacaatgatttaaatc 204  Q
    ||||| ||||| |||||| ||| ||| ||||| |||||||||| |||||||||| ||| ||||| |||||||   || || ||| |||||||||||| ||    
T  19447161 ctctcaaacacccactctcttattgggtgaaaccaatgtatgtcccaccactttatgtgggttccattttcaaaatgcaggaccgacaatgatttaactc 19447260  T
Q  205 aacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||  ||| ||||||||||| |||| ||||||||||||||||||||    
T  19447261 aattagagagtgagtattaaagagagtgttcaaaagagagtgttg 19447305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 249
Target Start/End: Complemental strand, 45311075 - 45310955
Alignment:
Q  132 tggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagag 228  Q
    |||||||||||||| ||||| |||||||||||||  | |||||||||||   || |||| |||||||||||||||||| |||| ||| ||||||||||||    
T  45311075 tggatgaaatcaatatatgtcccaccactttgtggggattcaattttcaaagtgaagacttacaatgatttaaatcaataagagagtaagtattagagag 45310976  T
Q  229 ggtgttcaaaagagagtgttg 249  Q
       |||||||||||| |||||    
T  45310975 tcagttcaaaagagaatgttg 45310955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 40991760 - 40991596
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt-tca--tgta 184  Q
    |||||||||| ||  ||||||||||||| |||||||||||| | |||||||||||||| ||||| ||||| | |||| ||||  | |||| | |  ||||    
T  40991760 caacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatatatgtcccaccccattgtattggcactatttctgaagtgta 40991661  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||||||||||| ||| || | ||||||||| |||||| |||||||||| | |||||||    
T  40991660 gacccacaatgatttaaaccaataaaagagtgagtatcagagagagtgttcaaaaaaaagtgttg 40991596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 122 - 249
Target Start/End: Original strand, 22542424 - 22542554
Alignment:
Q  122 actcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgag 218  Q
    ||||||||| || |||||||||| |||||| |||||||||||||| |||||||||||||     ||| || |||||||||||||  || |||| ||||||    
T  22542424 actcttttattgaatgaaatcaaagtatgttccaccactttgtgtgggttcaattttcaaagaatagtcccacaatgatttaaactaataagagagtgag 22542523  T
Q  219 tattagagagggtgttcaaaagagagtgttg 249  Q
    ||||| | || |||||||||||| |||||||    
T  22542524 tattaaaaagagtgttcaaaagatagtgttg 22542554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 103 - 234
Target Start/End: Complemental strand, 33653645 - 33653511
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgtagacctacaatgattt 199  Q
    |||||||||||||  | |||||| |||| | |||||||||||||||||| |||||| ||||||  | ||||||||||   || | || | ||||||||||    
T  33653645 aacactctctctattaatcactcatttatttgatgaaatcaatgtatgtcccaccattttgtggggtttcaattttcaaaatattgatccacaatgattt 33653546  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgtt 234  Q
    ||| ||| ||||||||||||||||||||| |||||    
T  33653545 aaaccaataagaaagtgagtattagagagagtgtt 33653511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 245
Target Start/End: Complemental strand, 25719268 - 25719123
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgta-gacctacaatgattt 199  Q
    |||||||||| |||||||||||| ||| ||| |||||||||||||||| |||||||||| ||| ||||  |||| |   ||||| |||| ||||||||||    
T  25719268 acactctctcaaacactcactctcttattggttgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgtaggacccacaatgattt 25719169  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagt 245  Q
    ||  |||  ||| |||||||||||||||   |||||||||||||||    
T  25719168 aacccaatcagagagtgagtattagagaaattgttcaaaagagagt 25719123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 48339494 - 48339419
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    |||||||| ||||||||||||| ||| ||||  |||||||||||||| |||||||||||||| |||||||||||||    
T  48339494 cactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttca 48339419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 249
Target Start/End: Original strand, 13069971 - 13070114
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta-gacctacaatgatttaaatc 204  Q
    ||||||| |||||||||||||| ||| |||||||||||||||| |||||||||| ||| ||||| |||||||   |||| | |||||| |||||| | ||    
T  13069971 ctctctagcactcactcttttattgg-tgaaatcaatgtatgttccaccactttatgtgggttccattttcaaagtgtaggtcctacattgattttactc 13070069  T
Q  205 aacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    || || | ||||||| |||||||   |||||||||||||||||||    
T  13070070 aataaaagagtgagtgttagagaaaatgttcaaaagagagtgttg 13070114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 29699522 - 29699650
Alignment:
Q  112 tctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca--tgtagacctacaatgatttaaatcaacaa 209  Q
    |||| |||||||||||||| ||||||||||||||  |||| |||||||||||||||||||| ||||  |  | ||| || ||||||||||||| ||| ||    
T  29699522 tctagcactcactcttttattggatgaaatcaatacatgtcccaccactttgtgttggttctatttcaaagtatagcccgacaatgatttaaaacaataa 29699621  T
Q  210 gaaagtgagtattagagagggtgttcaaa 238  Q
    || ||||| ||||||| || |||| ||||    
T  29699622 gagagtgaatattagatagagtgtacaaa 29699650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 50652479 - 50652369
Alignment:
Q  115 aacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaaga 211  Q
    ||||||||| |||||| || || |||||||||||| |  ||||||||||||| |||||||||||||   ||||||| |||||| ||||||||||| ||||    
T  50652479 aacactcac-cttttattgcataaaatcaatgtatatctcaccactttgtgtaggttcaattttcaaaatgtagacgtacaataatttaaatcaataaga 50652381  T
Q  212 aagtgagtatta 223  Q
    |||||| |||||    
T  50652380 aagtgaatatta 50652369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 248
Target Start/End: Original strand, 49077273 - 49077421
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||| ||||| || |||||| ||||||| | ||| |||| ||| ||||| |||||||||||||| ||||||||||| |   |||||||| ||||||||||    
T  49077273 aacattctctttagcactcattcttttattagataaaattaatatatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaatgattt 49077372  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgtt 248  Q
    ||| ||| ||||   |||||| |  ||| |||||| |||||||||||||    
T  49077373 aaaccaataagagtttgagtactcaagaaggtgtttaaaagagagtgtt 49077421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 46242116 - 46242000
Alignment:
Q  85 tatcaacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---at 181  Q
    ||||||||||||| || |||||||||||  |||  |||| ||||||  ||||||||||| ||||||| |||||| ||||||| ||||||||||||   ||    
T  46242116 tatcaacactcactttttaacactctctagaac--tcacacttttatgggatgaaatcattgtatgtcccaccattttgtgtaggttcaattttcaaaat 46242019  T
Q  182 gtagacctacaatgattta 200  Q
     |||||| |||||||||||    
T  46242018 atagacccacaatgattta 46242000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 162
Target Start/End: Complemental strand, 47237915 - 47237838
Alignment:
Q  85 tatcaacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||||| | ||  ||||||||||||| || ||||||||||| |||||||||||||| ||||| ||||||||||    
T  47237915 tatcaacactctcttttgaacactctctctagcattcactcttttattggatgaaatcaatatatgtcccaccacttt 47237838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 42862575 - 42862500
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    |||| |||||| |||||||| ||||| ||| |||||||||||||||| |||||||||| ||| ||||| |||||||    
T  42862575 cactttctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttca 42862500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 21777000 - 21776942
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||| | ||||||||    
T  21777000 acactctctctaacattcactcttttattggataaaatcaatgtatgtcctaccacttt 21776942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 22592328 - 22592402
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    |||| |||||||  |||||||||||||| |||||||||| ||||| ||| |||||||||||||| ||||| ||||    
T  22592328 aacattctctctggcactcactcttttattggatgaaataaatgtttgtcccaccactttgtgtaggttctattt 22592402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 249
Target Start/End: Complemental strand, 10169795 - 10169652
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgtagacctacaatgatttaaatca 205  Q
    |||||||| | ||||||| ||| |||||||||||||| ||||| | ||||||||||||  |||||||||||   |  |||| | ||||| ||||||| ||    
T  10169795 ctctctaatattcactctattattggatgaaatcaatatatgtcctaccactttgtgtgagttcaattttcaaaacatagatccacaattatttaaacca 10169696  T
Q  206 acaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    | |||| ||||| ||||| | ||| |||| |||| |||||||||    
T  10169695 ataagagagtgaatattaaaaaggatgttaaaaaaagagtgttg 10169652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 16178742 - 16178697
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  16178742 aacactctctctaactctcactcttttattggatgaaatcaatgta 16178697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 33996091 - 33996014
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||| |||||||||| ||||||||||| |  || ||||||||||||||  ||||||||| ||| |||||||||||||    
T  33996091 aacacactctctaacattcactcttttattaaatcaaatcaatgtatgtctcaccactttttgtgggttcaattttca 33996014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 2088818 - 2088762
Alignment:
Q  106 actctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||||||||||||||||| | ||  |||||||||||||||| ||||||||||    
T  2088818 actctctctaacactcactctttaattgagtgaaatcaatgtatgtcccaccacttt 2088762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 31251015 - 31250933
Alignment:
Q  127 tttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgtagacctacaatgatttaaatcaa 206  Q
    |||| |||||||||||||||||||| |||||| ||| ||   |||||||||||   ||||||||| |||||||||||||||||    
T  31251015 tttattggatgaaatcaatgtatgtcccaccattttatggacgttcaattttcaaaatgtagacccacaatgatttaaatcaa 31250933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 20225491 - 20225386
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatca 205  Q
    ||||||| |||||||||||||| |||||| |||| ||| |||| |||||||||| ||| ||||| |||| ||   |||||||  ||||||||||||| ||    
T  20225491 ctctctagcactcactcttttattggatggaatccatgcatgtcccaccactttttgtgggttctatttccaaagtgtagactcacaatgatttaaacca 20225392  T
Q  206 acaaga 211  Q
    | ||||    
T  20225391 ataaga 20225386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 37315589 - 37315643
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||||||||||||||||||   ||| |||||||||||||||| ||||||||||    
T  37315589 cactctctctaacactcactcttt---tgggtgaaatcaatgtatgtcccaccacttt 37315643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 39016687 - 39016742
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccacca 158  Q
    |||||||||| ||||||| ||| ||||| |||||||||||||||||||| ||||||    
T  39016687 aacactctctataacacttactattttattggatgaaatcaatgtatgtcccacca 39016742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 11127794 - 11127854
Alignment:
Q  120 tcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttc-aattttca 180  Q
    |||||||||||  ||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  11127794 tcactcttttatgggatgaaatcaatgtatgt-ccaccactttgtattggttctaattttca 11127854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 11127854 - 11127894
Alignment:
Q  211 aaagtgagtattagagagggtgttcaaaagagagtgttgata 252  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  11127854 aaagtgagtattagagagggtgttcaaaa-agagtgttgata 11127894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 50481687 - 50481584
Alignment:
Q  117 cactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaa 213  Q
    |||||||||||||| ||||||||||||| ||||||  ||||||||||| | | ||| |||||||   |||||||  ||||| ||||||| ||| |||| |    
T  50481687 cactcactcttttattggatgaaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgtagacacacaatcatttaaaccaataagaga 50481588  T
Q  214 gtga 217  Q
    ||||    
T  50481587 gtga 50481584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 50571888 - 50571965
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||||||||||| |||| ||||||||| | |||||||||||||||||  ||| || ||| ||| | |||||||||||    
T  50571888 aacactctctctagcacttactcttttattagatgaaatcaatgtatgccccatcaatttatgtggcttcaattttca 50571965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 16178610 - 16178681
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    ||||||||||| |||||||||||| | ||  |||||||||||||||| |||||||||| ||| ||||| ||||    
T  16178610 cactctctctagcactcactcttt-attgagtgaaatcaatgtatgtcccaccactttatgtgggttccattt 16178681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 27654501 - 27654560
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||||||||||||||||| ||| ||| ||||| |||  ||||||||| ||||||||||    
T  27654501 aacactctctctaacactcattctcttattggataaaactaatgtatgtcccaccacttt 27654560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 37451078 - 37451023
Alignment:
Q  191 caatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtg 246  Q
    |||||||||||| ||| || | ||||||||||||||| |||||| |||||||||||    
T  37451078 caatgatttaaaccaataaaagagtgagtattagagaaggtgtttaaaagagagtg 37451023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 41153351 - 41153280
Alignment:
Q  106 actctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    ||||||| || |||| ||||||||| ||||||||||  ||| |||| |||||||||||||| ||||| ||||    
T  41153351 actctctttatcacttactcttttattggatgaaattcatgcatgtcccaccactttgtgtaggttctattt 41153280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 43124654 - 43124607
Alignment:
Q  119 ctcactcttttactggatgaaatcaatgtatgtgccaccactttgtgt 166  Q
    ||||||| |||| |||||||||||||||||||| |||||| |||||||    
T  43124654 ctcactcatttaatggatgaaatcaatgtatgtcccaccattttgtgt 43124607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 51206200 - 51206157
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||    
T  51206200 cactctctctagcactcactcttttattgggtgaaatcaatgta 51206157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 249
Target Start/End: Original strand, 5545714 - 5545752
Alignment:
Q  211 aaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  5545714 aaagtaagtattagagagagtgttcaaaagagagtgttg 5545752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 249
Target Start/End: Original strand, 38636375 - 38636508
Alignment:
Q  117 cactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaa 213  Q
    |||||||||||||| | ||| ||||||||||||||  ||| ||||| ||| |||  |||||| |   |||||| | ||||||||||| ||||| ||||||    
T  38636375 cactcactcttttatttgataaaatcaatgtatgtctcactactttatgtgggtctaatttttaaagtgtagatccacaatgatttatatcaataagaaa 38636474  T
Q  214 gtgagtattagagagggtgttcaaaagagagtgttg 249  Q
     | | |||||||||  ||| |||||| |||||||||    
T  38636475 ataaatattagaga--gtggtcaaaaaagagtgttg 38636508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 145
Target Start/End: Original strand, 40812061 - 40812103
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaat 145  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||    
T  40812061 aacactctctctagcactcactcttttattgggtgaaatcaat 40812103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 18421984 - 18421922
Alignment:
Q  102 taacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgt 166  Q
    ||||||| ||||||||||  ||| ||||| | |||||||||||||||||| |||||||| |||||    
T  18421984 taacactttctctaacac--acttttttattagatgaaatcaatgtatgtcccaccactgtgtgt 18421922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 30111787 - 30111828
Alignment:
Q  99 ttctaacactctctctaacactcactcttttactggatgaaa 140  Q
    |||||||||||||||||||||||||| | ||| |||||||||    
T  30111787 ttctaacactctctctaacactcactttcttattggatgaaa 30111828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 37422921 - 37422958
Alignment:
Q  99 ttctaacactctctctaacactcactcttttactggat 136  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  37422921 ttctaacactctctctaatactcactcttttattggat 37422958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 38537577 - 38537520
Alignment:
Q  192 aatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||||||||||||||| || | | ||| |||||||||| |||||||||||| |||||||    
T  38537577 aatgatttaaatcaataaaagaatgattattagagagagtgttcaaaagaaagtgttg 38537520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 2187967 - 2187899
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttca 173  Q
    ||||||||||| |  || |||||||| ||| ||||||||||| |||| |||||||||| ||| ||||||    
T  2187967 cactctctctagctttcgctcttttattgggtgaaatcaatgaatgtcccaccactttatgtgggttca 2187899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 48608115 - 48608163
Alignment:
Q  114 taacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||| ||||||||||| ||||| |||| ||||||||| ||||||||||    
T  48608115 taacattcactcttttattggataaaattaatgtatgtcccaccacttt 48608163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 53871034 - 53870998
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcact 124  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  53871034 caacactcactttccaacactctctctaacactcact 53870998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 3e-42; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 22189963 - 22190112
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||||||||| |||||||||||||   ||||||||  |||||||||    
T  22189963 aacactctctctagcactcactcttttattggatgaaatcaatgtatggcccaccactttgtgtgggttcaattttcaaagtgtagacccgcaatgattt 22190062  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| ||| ||   |||||||||||||||||||||||||||||||||||||    
T  22190063 aaaccaataaacgagtgagtattagagagggtgttcaaaagagagtgttg 22190112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 107 - 249
Target Start/End: Original strand, 11824099 - 11824242
Alignment:
Q  107 ctctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaat 203  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| |||||| ||||||| | |||||||||||   |||| ||| ||||||||||||||    
T  11824099 ctctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaattttcaaagtgtaaacccacaatgatttaaat 11824198  T
Q  204 caacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| ||||||||||||||||||||  ||||||||||||||||||||    
T  11824199 caataagaaagtgagtattagaga--gtgttcaaaagagagtgttg 11824242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 27949282 - 27949446
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| || |||||||||||||||||||||||||| || |||||||||||||  ||||| | |||| |||||||  |||||| |||||   ||||    
T  27949282 caacactcactttttaacactctctctaacactcactcttgtattggatgaaatcaagttatgtcctaccattttgtgtgagttcaaatttcaaagtgta 27949381  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| |||||||||||||  || |||| |||||||||||||||| ||||||||||||||||||||    
T  27949382 gacccacaatgatttaaactaataagagagtgagtattagagagagtgttcaaaagagagtgttg 27949446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 27888291 - 27888455
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  | ||||||||||||||||||| || | | ||||| |||||||||||||| |||||||||||||| ||||||||||| |   ||||    
T  27888291 caacactcacttttgagcactctctctaacactcaccctctcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgta 27888390  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||||||||||| ||| |||| ||||||| |||||||| ||| ||||||||||||||||    
T  27888391 gacccacaatgatttaaaccaataagagagtgagtgttagagagagtgctcaaaagagagtgttg 27888455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 109 - 249
Target Start/End: Original strand, 11692209 - 11692352
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatca 205  Q
    |||||||| | ||||||||||| |||||||||||||||||||| | |||||||||||| |||||||||||||   |||| ||  ||| |||||||||  |    
T  11692209 ctctctaatattcactcttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgtaaactcacagtgatttaaacta 11692308  T
Q  206 acaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    | | || |||||||||||||||| ||||||||||||||||||||    
T  11692309 atatgagagtgagtattagagagtgtgttcaaaagagagtgttg 11692352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 32213039 - 32212877
Alignment:
Q  89 aacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaatttt---catgtag 185  Q
    ||||||||| || |||||||||||||| |||||  ||||||| ||||||||||||||||||||  ||| ||||||| |  ||||||||||    ||||||    
T  32213039 aacactcactttttaacactctctctagcactctatcttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag 32212940  T
Q  186 acctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
     || ||||||||||||| ||| |||| ||||||||||| | |||||||||||||||||||||||    
T  32212939 -cccacaatgatttaaaccaataagagagtgagtattatatagggtgttcaaaagagagtgttg 32212877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 32205088 - 32205249
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||||||||||||   |||||||||||| |||||||||||||||||||| | |||| ||||||| ||||||||||| |   | ||    
T  32205088 caacactcacttttgaacactctctcta---ctcactcttttattggatgaaatcaatgtatgtcctaccattttgtgtgggttcaatttttaaagtata 32205184  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |  |||||||||||||||  || |||| ||||||||||||||||| ||||||||||| |||||||    
T  32205185 ggtctacaatgatttaaactaataagagagtgagtattagagaggatgttcaaaagaaagtgttg 32205249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 33008113 - 33008274
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||||| |||||| |||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||| |||| ||   ||||    
T  33008113 caacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgtatgtcccaccactttgtgtgggttctatttccaatgtgta 33008212  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||||||||||| ||| || | || ||||||||   || ||||||||||||||||||||    
T  33008213 gacccacaatgatttaaaccaataaaagagagagtatta---agagtgttcaaaagagagtgttg 33008274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 7775024 - 7775172
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||||| || |||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||||||   ||| |||| | ||||||||    
T  7775024 aacactctctatagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgtggacc-agaatgattt 7775122  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||  || |||  ||||| |||||||||| |||||||||||||| |||||    
T  7775123 aaacaaataagtgagtgaatattagagagagtgttcaaaagagaatgttg 7775172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 39254107 - 39254256
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaatttt---catgtagacctacaatgattt 199  Q
    |||| ||||| || |||||||||||||| || || |||| |||||||||  |||||||||||||||||||||||||    ||||||||| ||||| ||||    
T  39254107 aacattctctatagcactcactcttttattgaataaaattaatgtatgtttcaccactttgtgttggttcaatttttaaaatgtagacccacaataattt 39254206  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||||||| |||| ||||||| ||| |||| |||||||||||||| |||||    
T  39254207 aaatcaataagagagtgagtgttaaagagagtgttcaaaagagaatgttg 39254256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 103 - 249
Target Start/End: Complemental strand, 44350958 - 44350809
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||| |||||||||  |||| ||||| ||||| ||||||||||||||  |  |||||||| | |||||||||||||   |||||||  ||||||||||    
T  44350958 aacactttctctaacatccacttttttattggatcaaatcaatgtatgtctcgtcactttgtttaggttcaattttcaaagtgtagactcacaatgattt 44350859  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| |||||| | ||||||||||||||| |||||||||||||||||||||    
T  44350858 aaaccaacaaaagagtgagtattagagatggtgttcaaaagagagtgttg 44350809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 46517302 - 46517464
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| || |||||||||||  | ||||||||| |||| ||||| |||||||||||| | |||||| | ||||  |||||||||||||   ||||    
T  46517302 caacactcactttttaacactctct--agcactcactcatttattggataaaatcaatgtatatcccaccattctgtgggggttcaattttcaaagtgta 46517399  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||  ||||||||||||| ||| |||| | ||||||||||||||| |||||||||||||||||||    
T  46517400 gactcacaatgatttaaaccaataagagaatgagtattagagaggctgttcaaaagagagtgttg 46517464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 103 - 234
Target Start/End: Complemental strand, 12263592 - 12263458
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    ||||||||||||| ||  ||||||||||  ||||| ||||||||||||| ||| |||||||||| || ||||||||||   |||||||| ||||||||||    
T  12263592 aacactctctctatcatccactcttttatcggatggaatcaatgtatgtcccatcactttgtgtaggatcaattttcaaagtgtagacccacaatgattt 12263493  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgtt 234  Q
    ||| ||| |||| |||||||||||||||| |||||    
T  12263492 aaaccaataagatagtgagtattagagagagtgtt 12263458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 6442189 - 6442338
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    ||||||||||||| |||||| || |||| || ||||||||||||||||| |||||| ||||||  | |||||||||||   |||||||| ||||||||||    
T  6442189 aacactctctctatcactcagtcatttattgtatgaaatcaatgtatgttccaccattttgtggggattcaattttcaaagtgtagacccacaatgattt 6442288  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| ||| || | ||||||||||| |||  |||||||||||| |||||||    
T  6442289 aaaccaataaaagagtgagtattaaagatagtgttcaaaagaaagtgttg 6442338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 14795140 - 14795297
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  ||||||||||||| || ||||| ||||| |||||||||||||||||||| |||||| ||| ||||||||||||||| |   ||||    
T  14795140 caacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagtgta 14795239  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagag 242  Q
     | | | |||||||||||  || |||| ||||||||| |||||| |||||||||||||    
T  14795240 tatccataatgatttaaactaataagagagtgagtataagagagagtgttcaaaagag 14795297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 242
Target Start/End: Original strand, 15242132 - 15242289
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  ||||||||||||| || ||||| ||||| |||||||||||||||||||| |||||| ||| ||||||||||||||| |   ||||    
T  15242132 caacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagtgta 15242231  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagag 242  Q
     | | | |||||||||||  || |||| ||||||||| |||||| |||||||||||||    
T  15242232 tatccataatgatttaaactaataagagagtgagtataagagagagtgttcaaaagag 15242289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 88 - 216
Target Start/End: Complemental strand, 31502635 - 31502504
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||| ||||||||||||||||||||||| ||||||||||||| |||||| |||||| |||||||  ||||||||||||   ||||    
T  31502635 caacactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaaggtatgtcccaccattttgtgtgcgttcaattttcaaagtgta 31502536  T
Q  185 gacctacaatgatttaaatcaacaagaaagtg 216  Q
    |||  ||||||||||||| ||| |||| ||||    
T  31502535 gactcacaatgatttaaaccaataagagagtg 31502504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 249
Target Start/End: Complemental strand, 6580120 - 6580009
Alignment:
Q  141 tcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaa 237  Q
    |||||||||||  ||| ||||||||| |||||||||||||   | | |||| ||||| ||||||| ||| |||| |||||||||||||||| ||||||||    
T  6580120 tcaatgtatgtctcactactttgtgtaggttcaattttcaaaatatggacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaa 6580021  T
Q  238 aagagagtgttg 249  Q
    ||||||||||||    
T  6580020 aagagagtgttg 6580009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 17354681 - 17354609
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| ||| ||||| ||||    
T  17354681 cactctctctaacactcattcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttctattt 17354609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 134 - 249
Target Start/End: Complemental strand, 25686960 - 25686842
Alignment:
Q  134 gatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagaggg 230  Q
    ||||||||||||||||||   |||||||| | | |||||||||||||   |||||||| ||||||||||||| ||| |||| | ||||||||||| ||      
T  25686960 gatgaaatcaatgtatgtcataccactttttatgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagataatgagtattagaaagaa 25686861  T
Q  231 tgttcaaaagagagtgttg 249  Q
    |||||||||||||||||||    
T  25686860 tgttcaaaagagagtgttg 25686842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 249
Target Start/End: Complemental strand, 24539278 - 24539129
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgta-gacctacaatgattt 199  Q
    ||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||| | | | ||| |||| |   ||||| |||| ||| ||||||    
T  24539278 acactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtatgacccacattgattt 24539179  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||  |||  ||| ||||||| |||||||| |||| |||||||||||||||    
T  24539178 aacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttg 24539129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 240
Target Start/End: Complemental strand, 19423005 - 19422850
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgta 184  Q
    |||||||||| ||  ||||||||||||| |||||||||||| | |||||||||||||||||||| ||||| | |||| |||   | ||||||    ||||    
T  19423005 caacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatgtatgtcccaccccattgtattgtcactattttcgaagtgta 19422906  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaag 240  Q
    || | ||||||||||||| ||| || | ||||||||| |||||  |||||||||||    
T  19422905 gatccacaatgatttaaaccaataaaagagtgagtatcagagatagtgttcaaaag 19422850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 30742616 - 30742547
Alignment:
Q  180 atgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||||||||||||||||||||||||||| |||||| ||| |||||||| | |||||||||| |||||||||    
T  30742616 atgtagacctacaatgatttaaatcaataagaaaatgaatattagagtgagtgttcaaaatagagtgttg 30742547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 249
Target Start/End: Complemental strand, 48374589 - 48374446
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatca 205  Q
    |||||||  ||||||||||||| || ||| |||  ||| |||| |||||||||| | | ||||| |||| ||   |||| ||  ||||| ||||||| ||    
T  48374589 ctctctagtactcactcttttattgaatggaattcatgcatgtcccaccactttctatgggttctatttccaaagtgtatactcacaataatttaaacca 48374490  T
Q  206 acaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  48374489 acaagagagtgagtattagagagagtgttcaaaagagagtgttg 48374446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 8073430 - 8073366
Alignment:
Q  117 cactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttcat 181  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  8073430 cactcactcttttatcggatgaaatcaatgtatgtcccaccactttgtgtaagttcaattttcat 8073366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 104 - 249
Target Start/End: Original strand, 17749719 - 17749868
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgta-gacctacaatgattt 199  Q
    ||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||| | | | ||  |||| |   ||||| |||| ||| ||||||    
T  17749719 acactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggatttcatttccaaaatgtatgacccacattgattt 17749818  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||  |||  ||| ||||||| |||||||| |||| |||||||||||||||    
T  17749819 aacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttg 17749868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 249
Target Start/End: Original strand, 27320448 - 27320547
Alignment:
Q  153 ccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||||| ||||||| ||||||||||| |   |||||||| ||||| |||||||| || ||||||||||||| ||||||| || ||||||||||| |||||    
T  27320448 ccaccattttgtgtaggttcaatttttaaagtgtagacccacaattatttaaatgaataagaaagtgagtagtagagagagtattcaaaagagaatgttg 27320547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 44511092 - 44511015
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||||||||  || |||||||| |  ||||||||||||    
T  44511092 aacactctctctagcactcacttttttattggatgaaatcaatgtatgtctcatcactttgtctgtgttcaattttca 44511015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 13919806 - 13919881
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||||||||| ||||| ||| |||| ||| |||||||||||||||| |||||||||| ||| ||||| |||||||    
T  13919806 cactctctctagcactcgctcatttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttca 13919881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 19494480 - 19494418
Alignment:
Q  118 actcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||||||||||| ||| |||||||||||||||| |||||||||| ||| ||||| |||||||    
T  19494480 actcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttca 19494418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 26703591 - 26703522
Alignment:
Q  108 tctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||  ||||||||| ||| ||||| ||||    
T  26703591 tctctctagcactcactcttttattgggtgaaatcaatgtatgtctcaccactttatgtgggttccattt 26703522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 32178953 - 32178823
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatca 205  Q
    ||||||| |||| ||| ||||| |||||||||| ||||||||| |||||||| ||| ||  |||||||||||   |||| ||  ||||||||||||||||    
T  32178953 ctctctagcacttactattttattggatgaaattaatgtatgttccaccactctgtttta-ttcaattttcaaagtgtatacacacaatgatttaaatca 32178855  T
Q  206 acaagaaagtgagtattagagagggtgttcaa 237  Q
    | |||| ||||| ||| ||||||  |||||||    
T  32178854 ataagagagtgattatcagagagattgttcaa 32178823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 43930129 - 43930078
Alignment:
Q  90 acactcaccttctaacactctctctaacactcactcttttactggatgaaat 141  Q
    |||||| | |||||||||||||||||||||||||||||||| ||| ||||||    
T  43930129 acactctctttctaacactctctctaacactcactcttttattgggtgaaat 43930078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 249
Target Start/End: Original strand, 45909481 - 45909630
Alignment:
Q  105 cactctctctaacactcactctttt-actggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta-gacctacaatgattt 199  Q
    ||||||| ||| || |||||||||| | ||| |||||||||||||||| |||||||||| ||| ||||| |||| ||   |||| | |||||| ||||||    
T  45909481 cactctccctagcattcactctttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaattgtaggtcctacattgattt 45909580  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
     |  ||| || | ||||||| |||||||| || |||||||||||||||||    
T  45909581 tacccaataaaagagtgagtgttagagagagtattcaaaagagagtgttg 45909630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 238
Target Start/End: Original strand, 7459353 - 7459505
Alignment:
Q  89 aacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgtag 185  Q
    ||||||||| || ||||| ||||| ||| ||||| ||||||| | ||| |||||||||||| | |||||||||| |||  | |||||||||   || |||    
T  7459353 aacactcactttttaacattctctataatactcattcttttattcgataaaatcaatgtatattccaccactttatgtgagctcaattttcaaaatatag 7459452  T
Q  186 acctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaa 238  Q
    | | ||||| ||||||| ||| || | ||||||||||| |||| || ||||||    
T  7459453 atccacaataatttaaaccaataaaagagtgagtattaaagagagtattcaaa 7459505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 12271010 - 12271086
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    |||||||||| || ||  ||||||||||   |||||||||||||||||| ||||||||||||| |||||| |||||||    
T  12271010 aacactctctatagcatccactcttttatcagatgaaatcaatgtatgtcccaccactttgtg-tggttctattttca 12271086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 10477278 - 10477338
Alignment:
Q  120 tcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||| ||||| |||||||||||| |||||||  ||||| ||||||| |||||||||||||    
T  10477278 tcactattttattggatgaaatcagtgtatgtttcaccattttgtgtaggttcaattttca 10477338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 22786177 - 22786249
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    ||||||||||| |||||||| ||||| | | ||||||||||||||||  ||||||||| ||| ||||| ||||    
T  22786177 cactctctctagcactcacttttttattaggtgaaatcaatgtatgtctcaccactttatgtgggttccattt 22786249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 22155970 - 22155939
Alignment:
Q  99 ttctaacactctctctaacactcactctttta 130  Q
    ||||||||||||||||||||||||||||||||    
T  22155970 ttctaacactctctctaacactcactctttta 22155939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 22211885 - 22211854
Alignment:
Q  99 ttctaacactctctctaacactcactctttta 130  Q
    ||||||||||||||||||||||||||||||||    
T  22211885 ttctaacactctctctaacactcactctttta 22211854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 32055600 - 32055659
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||| ||||||||||| |||| |||| |||||||||||| | ||||| ||||||||||    
T  32055600 aacactatctctaacactaactcatttattggatgaaatcattttatgtcccaccacttt 32055659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 38065388 - 38065333
Alignment:
Q  194 tgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||||||||| ||| ||||||||||||||| ||||| ||||| || |||||||||||    
T  38065388 tgatttaaaccaataagaaagtgagtatttgagagagtgttgaagagagagtgttg 38065333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 46067973 - 46068036
Alignment:
Q  114 taacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    ||||||||||||  ||| ||| |||||||||||||||| |||||||||| ||| ||||| ||||    
T  46067973 taacactcactcccttattggttgaaatcaatgtatgttccaccactttatgtgggttccattt 46068036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 12167315 - 12167365
Alignment:
Q  184 agacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgtt 234  Q
    ||||| ||||||||||||| ||| |||||||||||||||| |||| |||||    
T  12167315 agacccacaatgatttaaaccaataagaaagtgagtattaaagagagtgtt 12167365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 25980769 - 25980811
Alignment:
Q  99 ttctaacactctctctaacactcactcttttactggatgaaat 141  Q
    |||||||||||||||||| |||||||||| || ||||||||||    
T  25980769 ttctaacactctctctaaaactcactcttctattggatgaaat 25980811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 31874061 - 31874103
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgt 151  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||    
T  31874061 ctctctagcactcacttttttattggatgaaatcaatgtatgt 31874103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 45909612 - 45909570
Alignment:
Q  106 actctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    ||||||||||||||||||||||||| ||| | |||||||||||    
T  45909612 actctctctaacactcactcttttattgggtaaaatcaatgta 45909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 2520657 - 2520698
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaa 144  Q
    ||||||||||| |||||||||||||||| ||| |||||||||    
T  2520657 aacactctctccaacactcactcttttattgggtgaaatcaa 2520698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 25428620 - 25428567
Alignment:
Q  118 actcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggtt 171  Q
    ||||||||||||| ||  |||||||||||||||| |||||||||| ||| ||||    
T  25428620 actcactcttttattgtgtgaaatcaatgtatgtcccaccactttatgtgggtt 25428567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 27320249 - 27320294
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    ||||||||||| |||||||||||||||| || || |||||||||||    
T  27320249 aacactctctccaacactcactcttttattgaataaaatcaatgta 27320294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 36845567 - 36845498
Alignment:
Q  180 atgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||||||||| ||||||||||||| ||| |||| ||||| ||||  |||| || ||||||| |||||||||    
T  36845567 atgtagacccacaatgatttaaaccaataagagagtgaatattctagagagtattcaaaatagagtgttg 36845498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 36845661 - 36845567
Alignment:
Q  119 ctcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaaga 211  Q
    |||||||||||| || ||||||||||| ||| |  ||||| ||||||| |||||||||||||   | |||||| ||||||||||||| ||| ||||    
T  36845661 ctcactcttttattgaatgaaatcaatatat-tctcaccaatttgtgtgggttcaattttcaaagtatagacccacaatgatttaaaccaataaga 36845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 47821990 - 47822047
Alignment:
Q  90 acactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgt 147  Q
    |||||| | ||||| ||||||||||||||||||||||| || ||| ||||||| ||||    
T  47821990 acactctctttctagcactctctctaacactcactcttatattgggtgaaatccatgt 47822047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 14759670 - 14759726
Alignment:
Q  106 actctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||| ||| |||||||||||||| ||  |||||||||| ||||| ||||||||||    
T  14759670 actctccctagcactcactcttttattgagtgaaatcaatttatgtcccaccacttt 14759726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 19840908 - 19840948
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaat 145  Q
    ||||||||||| |||||||||||||| ||| ||||||||||    
T  19840908 cactctctctagcactcactcttttattgggtgaaatcaat 19840948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 49160410 - 49160366
Alignment:
Q  98 cttctaacactctctctaacactcactcttttactggatgaaatc 142  Q
    ||||||||||||||||||||||| ||| | ||| |||||||||||    
T  49160410 cttctaacactctctctaacacttactttattattggatgaaatc 49160366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 8e-40; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 107 - 249
Target Start/End: Original strand, 9470109 - 9470253
Alignment:
Q  107 ctctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaat 203  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| | |||||||||||||   |||||||| |||||||||||||     
T  9470109 ctctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacccacaatgatttaaac 9470208  T
Q  204 caacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| |||| ||||| ||||||||||||| |||| ||||||||||||    
T  9470209 caataagagagtgaatattagagagggt-ttcagaagagagtgttg 9470253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 26767932 - 26767768
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||| |||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||   ||||    
T  26767932 caacactcacttttcaacattctctctagcacttactcttttactggatgaaatcaatgtatgtcccaccactttgtgagggttcaattttcaaattgta 26767833  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||  ||||||||||||| ||| || | ||||||||||||| || |||||||||||| |||||||    
T  26767832 gactcacaatgatttaaaccaataaaagagtgagtattagatagagtgttcaaaagaaagtgttg 26767768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 45554576 - 45554732
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgta 184  Q
    |||||||||| ||  ||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||        ||||||||    ||||    
T  45554576 caacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactttg--------caattttccaagtgta 45554667  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||  |||||||||||||||||||    
T  45554668 gacccacaatgatttaaaccaataagaaagtgagtattagagagaatgttcaaaagagagtgttg 45554732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 103 - 249
Target Start/End: Complemental strand, 6980276 - 6980127
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||||| | ||||||||||||  ||||||||||||   | |||||| ||||||||||    
T  6980276 aacactctctctagcactcactcttttattggatgaaatcaaggtatgttctaccactttgtgtgagttcaattttcaaagtatagacccacaatgattt 6980177  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
     ||  || |||| |||||||||||||||  ||||||||||||||||||||    
T  6980176 caactaataagagagtgagtattagagaaagtgttcaaaagagagtgttg 6980127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 12989200 - 12989364
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||||||||| |  |||||||||||| | |||||||||||||||||||| |||||||||||| | | ||| |||| |    ||||    
T  12989200 caacactcacttttcaacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgtatggattctatttccgaagtgta 12989299  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||||||||||| ||| |||| |||||||||||||||| ||||||||||||||||||||    
T  12989300 gacccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttg 12989364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 103 - 245
Target Start/End: Original strand, 38464187 - 38464332
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||||||| ||| | ||| ||||| || |||||||||||||||||  || ||||||| || |||||||||||||   |||||||| ||||||||||    
T  38464187 aacactctctctgacaattacttttttattgtatgaaatcaatgtatgtctcatcactttgcgtgggttcaattttcaaagtgtagacccacaatgattt 38464286  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagt 245  Q
    ||| ||| |||| ||| |||||||||||| ||||||||||||||||    
T  38464287 aaaccaataagagagtaagtattagagagagtgttcaaaagagagt 38464332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 105 - 249
Target Start/End: Original strand, 44274260 - 44274407
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaa 201  Q
    |||||||||||||| ||||||||| | ||||| |||||||||||||| |||||||||||||| ||||||| |||||   |||||| | ||||||||||||    
T  44274260 cactctctctaacattcactctttcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaactttcaaagtgtagatccacaatgatttaa 44274359  T
Q  202 atcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    | ||| || | ||||||| ||||||||  | || ||||||||||||||    
T  44274360 accaataacagagtgagtgttagagagaatatttaaaagagagtgttg 44274407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 10981542 - 10981677
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||||||||||||||||| || || || ||||||  ||||||||| |||||||||||||| ||||| |||| ||   |||||||| ||||||||||    
T  10981542 aacactctctctaacactcacttttctattgaatgaaaaaaatgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacccacaatgattt 10981641  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttc 235  Q
    ||| ||| |||| |||||||||||||| | ||||||    
T  10981642 aaaccaataagagagtgagtattagagggagtgttc 10981677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 18511380 - 18511263
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| || |||||||||| ||| |||||||||||||| ||||| |||||||||||||| |||| | ||| ||| |||||||||||||   || |    
T  18511380 caacactcactttttaacactctcactatcactcactcttttattggataaaatcaatgtatgtcccactattttatgtgggttcaattttcaaagtgaa 18511281  T
Q  185 gacctacaatgatttaaa 202  Q
    ||||||||||| ||||||    
T  18511280 gacctacaatgttttaaa 18511263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 35316542 - 35316409
Alignment:
Q  118 actcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaag 214  Q
    ||||||||||||| | ||| |||| ||||||||| |||||| ||| ||||| ||||||||| |   |||||||| ||||||||||||||||| |||| ||    
T  35316542 actcactcttttattagataaaattaatgtatgtcccaccattttatgttgattcaatttttaaattgtagacccacaatgatttaaatcaataagagag 35316443  T
Q  215 tgagtattagagagggtgttcaaaagagagtgtt 248  Q
    ||||||| | | || ||| |||||||||||||||    
T  35316442 tgagtatcataaagagtgctcaaaagagagtgtt 35316409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 104 - 244
Target Start/End: Original strand, 15884458 - 15884597
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattta 200  Q
    |||||||||  |||||| ||||||||| |||| |||||||||||     |||||||||||||| |||||||||||||   |||||||| ||||| |||||    
T  15884458 acactctcttcaacacttactcttttattggacgaaatcaatgtc----ccaccactttgtgtgggttcaattttcaaaatgtagacccacaattattta 15884553  T
Q  201 aatcaacaagaaagtgagtattagagagggtgttcaaaagagag 244  Q
    || ||| |||| | |||||||||||||  ||| |||||||||||    
T  15884554 aaccaataagataatgagtattagagattgtggtcaaaagagag 15884597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 248
Target Start/End: Original strand, 11539447 - 11539598
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatca--atgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaa-tga 196  Q
    |||||||| |||| |||||||||||||| ||||||||||||  |||||||| ||| ||||||||||  |||| |||||||   |||||| | | || |||    
T  11539447 aacactctttctagcactcactcttttattggatgaaatcaatatgtatgttccatcactttgtgtgagttctattttcaaagtgtagatccagaattga 11539546  T
Q  197 tttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgtt 248  Q
    |||||| ||| |||| |||||||||||||||| ||||  |||||||| ||||    
T  11539547 tttaaaccaataagagagtgagtattagagagagtgtgtaaaagagaatgtt 11539598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 19639107 - 19639258
Alignment:
Q  93 ctcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacct 189  Q
    ||||| || |||||||||||| | || ||||| ||||| | ||||||||||||||||||  || ||| | ||||  ||||||||||||   || ||||||    
T  19639107 ctcactttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgcagacct 19639206  T
Q  190 acaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaaga 241  Q
    ||||||||||||| ||| |||| ||||| ||||| ||||| | |||||||||    
T  19639207 acaatgatttaaaccaataagagagtgaatattatagaggctattcaaaaga 19639258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 241
Target Start/End: Original strand, 19837700 - 19837851
Alignment:
Q  93 ctcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacct 189  Q
    ||||| || |||||||||||| | || ||||| ||||| | ||||||||||||||||||  || ||| | ||||  ||||||||||||   || ||||||    
T  19837700 ctcactttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgcagacct 19837799  T
Q  190 acaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaaga 241  Q
    ||||||||||||| ||| |||| ||||| ||||| ||||| | |||||||||    
T  19837800 acaatgatttaaaccaataagagagtgaatattatagaggctattcaaaaga 19837851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 117 - 249
Target Start/End: Complemental strand, 32856277 - 32856142
Alignment:
Q  117 cactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaa 213  Q
    |||| |||||||||  ||||||||| ||| |||||  ||||||||||||| |||| ||||||||   |||||| | | | ||||||||| ||| |||| |    
T  32856277 cactgactcttttatcggatgaaattaatatatgtttcaccactttgtgtgggttgaattttcaaagtgtagatccatagtgatttaaaccaataagaga 32856178  T
Q  214 gtgagtattagagagggtgttcaaaagagagtgttg 249  Q
     ||||||||||| ||||||||||||| |||||||||    
T  32856177 ttgagtattagaaagggtgttcaaaatagagtgttg 32856142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 228
Target Start/End: Complemental strand, 36472008 - 36471866
Alignment:
Q  89 aacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgtag 185  Q
    ||||||||| ||  |||||||||||| ||||||| ||| ||| ||||||||||||| ||||||  ||||||||| | | | ||||||||||   |||||     
T  36472008 aacactcacttttcaacactctctctgacactcaatctcttattggatgaaatcaaagtatgtctcaccactttttatggattcaattttcaaaatgtaa 36471909  T
Q  186 acctacaatgatttaaatcaacaagaaagtgagtattagagag 228  Q
    ||  ||||||||||||| ||| || | ||||||||||||||||    
T  36471908 actcacaatgatttaaaccaataaaagagtgagtattagagag 36471866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 42182915 - 42182987
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||||| |||||||||| ||| ||||| ||||    
T  42182915 cactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 42182987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 28898191 - 28898125
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggtt 171  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||||| |||||||||| ||| ||||    
T  28898191 cactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtt 28898125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 1110227 - 1110296
Alignment:
Q  108 tctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    ||||||||||||||||||||||| ||  |||||||||||||||| |||||||||| ||| ||||| ||||    
T  1110227 tctctctaacactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtgggttccattt 1110296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 180
Target Start/End: Original strand, 3804595 - 3804686
Alignment:
Q  90 acactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgt-gccaccactttgtgttggttcaattttca 180  Q
    |||||||| ||  |||||||||| ||||| ||||||||||| ||||||||||||||||||||  ||| |||||| ||| |||| ||||||||    
T  3804595 acactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatgtccccatcactttatgtaggtttaattttca 3804686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 15508938 - 15509012
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    |||||||| ||||||||||||||||||| ||  |||||||||||||||| |||||| ||| ||| ||||| ||||    
T  15508938 aacactctttctaacactcactcttttattgagtgaaatcaatgtatgtcccaccattttttgtgggttccattt 15509012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 30718499 - 30718340
Alignment:
Q  86 atcaacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tg 182  Q
    |||||||||||  ||  |||| ||||||||  ||||||||||||| ||||||||||| || ||||| ||| || ||||||| | ||  |||||||   ||    
T  30718499 atcaacactcaattttaaacattctctctagtactcactcttttattggatgaaatcgatatatgt-ccatcattttgtgtggattgtattttcaaagtg 30718401  T
Q  183 tagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagaga 243  Q
    |||||  ||||||||||||| ||| || ||||||| |||||||||| ||||  ||||||||    
T  30718400 tagactcacaatgatttaaaccaataaaaaagtgaatattagagagagtgtctaaaagaga 30718340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 41805931 - 41805873
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||| ||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  41805931 acactttctttaacactcactcttttattggataaaatcaatgtatgtcccaccacttt 41805873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 1107064 - 1107121
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||||| ||| |||||||||| ||| |||||||||||||||| ||||||||||    
T  1107064 cactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccacttt 1107121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 4964826 - 4964770
Alignment:
Q  106 actctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||||||| |||||||| ||||| ||| |||||||||||||||| ||||||||||    
T  4964826 actctctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccacttt 4964770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 6315697 - 6315741
Alignment:
Q  118 actcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||    
T  6315697 actcacttttttactggatgaaatcaatgtatgttccaccacttt 6315741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 88 - 243
Target Start/End: Complemental strand, 37652416 - 37652258
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||||| | | || |||| ||| ||||| | |||||||||||||||||| ||||| ||||||||  ||||||||| ||   ||||    
T  37652416 caacactcacatttcaacactttttttagcacttacttttttattagatgaaatcaatgtatgttccacccctttgtgtatgttcaatttccaacgtgta 37652317  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagaga 243  Q
    ||   ||||||||||||| ||| || ||||||| ||| ||||||  |||||||| ||||    
T  37652316 gattcacaatgatttaaaccaataaaaaagtgaatataagagagaatgttcaaatgaga 37652258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 249
Target Start/End: Complemental strand, 34142295 - 34142146
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||| |||||| |||| ||||| ||||| ||||||||||  ||||||||  ||| ||||||||| |||||||||||||   ||||||   |||||| |||    
T  34142295 aacaatctctcaaacattcacttttttattggatgaaattcatgtatgtctcactactttgtgtgggttcaattttcaaagtgtagagtcacaatggttt 34142196  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| ||| |||| ||||| ||||| |||   | ||| |||||||||||||    
T  34142195 aaaccaataagagagtgaatattaaagaaaatattctaaagagagtgttg 34142146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 42579813 - 42579771
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaat 145  Q
    ||||||||||| |||||||||||||||| ||||||||||||||    
T  42579813 aacactctctcaaacactcactcttttattggatgaaatcaat 42579771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 2476565 - 2476659
Alignment:
Q  110 tctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgtagacctacaatgatttaa 201  Q
    |||||| |||| ||||||||| | ||| |||||||||||||| |||| |||||||||   ||||||||||   |||||||| || ||||||||||    
T  2476565 tctctagcacttactcttttattagataaaatcaatgtatgtcccactactttgtgtaacttcaattttcaaaatgtagacttataatgatttaa 2476659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 223
Target Start/End: Complemental strand, 16719601 - 16719463
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgta 184  Q
    |||||||||| ||  |||||| ||| || |||  ||||||||| | |||||||||||||||| | |||||| ||  ||| ||||||||||||   |||||    
T  16719601 caacactcacttttcaacactgtctttagcacatactcttttattagatgaaatcaatgtatatcccaccatttcatgtaggttcaattttcaaaatgta 16719502  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtatta 223  Q
    ||||  |||||||||||| ||| |  ||| |||||||||    
T  16719501 gacccgcaatgatttaaaccaatacaaaaatgagtatta 16719463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 17188092 - 17188152
Alignment:
Q  106 actctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgt 166  Q
    |||||||||| |||||||| ||||| |||||||||||||||| | |  |||||||||||||    
T  17188092 actctctctatcactcactattttattggatgaaatcaatgtgtatctcaccactttgtgt 17188152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 25666749 - 25666701
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgt 151  Q
    ||||||||||| |||| |||||||||||  |||||||||||||||||||    
T  25666749 aacactctctcaaacattcactcttttatcggatgaaatcaatgtatgt 25666701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 37228524 - 37228592
Alignment:
Q  105 cactctctctaacactcactcttttactggatg-aaatcaatgtatgtgccaccactttgtgttggttc 172  Q
    ||||||||||| |||||||||||||| ||| || |||| ||||||||| |||||||||| ||| |||||    
T  37228524 cactctctctagcactcactcttttattgggtgaaaattaatgtatgtcccaccactttatgtgggttc 37228592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 4603008 - 4602890
Alignment:
Q  118 actcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaac-aagaaa 213  Q
    ||||||||||||| |||||||||||||| ||||| ||| |||||  |||| |||||||||| |   || ||||||| ||||||||||| |  | |||| |    
T  4603008 actcactcttttattggatgaaatcaatatatgttccatcactt--tgtttgttcaatttttaaagtgcagacctataatgatttaaaccgccaaagaga 4602911  T
Q  214 gtgagtattagagagggtgtt 234  Q
    |||| |||||||||| |||||    
T  4602910 gtgactattagagagagtgtt 4602890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 37719860 - 37719903
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    |||||| |||| |||||||||||||| |||||||||||||||||    
T  37719860 cactctttctagcactcactcttttattggatgaaatcaatgta 37719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 43400157 - 43400216
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||||||||||||||||||| | ||| |||||||||  | ||||||| ||||||||||    
T  43400157 aacactctctctaacactcactttcttattggatgaaactagtgtatgtcccaccacttt 43400216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 11775913 - 11775859
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccacca 158  Q
    ||||||||||||||||| | | ||||| ||||| ||||||||| |||||||||||    
T  11775913 acactctctctaacacttattgttttattggataaaatcaatgaatgtgccacca 11775859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 23403852 - 23403802
Alignment:
Q  97 ccttctaacactctctctaacactcactcttttactggatgaaatcaatgt 147  Q
    |||||||||||||| |||||| |||||||| ||||||| ||||||| ||||    
T  23403852 ccttctaacactctttctaaccctcactctcttactgggtgaaatccatgt 23403802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 28898061 - 28898103
Alignment:
Q  106 actctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    ||||||| || |||||||||||||| |||||||||||||||||    
T  28898061 actctctttagcactcactcttttattggatgaaatcaatgta 28898103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 8009567 - 8009522
Alignment:
Q  204 caacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||||| ||||||||| ||||| || ||||||||||||||||||||    
T  8009567 caacaaaaaagtgagtgttagaaagagtgttcaaaagagagtgttg 8009522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 249
Target Start/End: Complemental strand, 25238399 - 25238284
Alignment:
Q  138 aaatcaatgtatgtgccaccactt-tgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgt 233  Q
    ||||||||||||||  || ||||| | ||| ||||| |||||||   |||||| | ||||||||||||| ||| || |||||||||  ||||||  ||||    
T  25238399 aaatcaatgtatgtctcatcacttctttgtgggttctattttcaaagtgtagatccacaatgatttaaaccaataaaaaagtgagtgctagagaaagtgt 25238300  T
Q  234 tcaaaagagagtgttg 249  Q
    | ||||||||||||||    
T  25238299 ttaaaagagagtgttg 25238284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 30706390 - 30706443
Alignment:
Q  196 atttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||||||| |||||| ||||||||| || ||||| ||||| ||||||||||||||    
T  30706390 atttaaaccaacaataaagtgagtgtttgagagagtgttgaaaagagagtgttg 30706443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 31395599 - 31395542
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||||| || ||||||||| |||| ||| |||||||||||||||| || |||||||    
T  31395599 cactctctttagcactcactcctttattgggtgaaatcaatgtatgtccctccacttt 31395542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 31494236 - 31494289
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||||||||||||||| ||| |||||||||  ||||||||| |||| |||||    
T  31494236 ctctctaacactcactctcttattggatgaaaataatgtatgtcccactacttt 31494289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 2122804 - 2122880
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgt 164  Q
    |||||||||| ||  || ||| |||||| || ||||||||| |  |||||||||||||||||||  |||||||||||    
T  2122804 caacactcacttttcaatactttctctatcaatcactctttcataggatgaaatcaatgtatgtatcaccactttgt 2122880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 4552915 - 4552847
Alignment:
Q  181 tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||||||| ||||||||||||| ||| |||| ||||||||| ||| |   |||||||||| ||||||||    
T  4552915 tgtagacccacaatgatttaaaccaataagagagtgagtatcagaaaaaatgttcaaaagtgagtgttg 4552847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 24895416 - 24895368
Alignment:
Q  110 tctctaacactcactcttttactggatgaaatcaatgtatgtgccacca 158  Q
    ||||||| ||||||||||||| ||||| |||||||||||| | ||||||    
T  24895416 tctctaatactcactcttttaatggataaaatcaatgtatattccacca 24895368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 32701513 - 32701569
Alignment:
Q  122 actcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaatttt 178  Q
    ||||||||| ||||| |||||||||||| | |||||||||| |||  ||||||||||    
T  32701513 actcttttattggataaaatcaatgtatatcccaccactttatgtatgttcaatttt 32701569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 249
Target Start/End: Complemental strand, 34861337 - 34861199
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttcatgtagacctacaatgatttaaatcaaca 208  Q
    ||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||   || || ||||| ||||||| ||| |    
T  34861337 ctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaattttca--aagtcccacaataatttaaaccaata 34861240  T
Q  209 agaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| |||||||||||| ||||||||||||||||||||||||    
T  34861239 agagagtgagtattagggagggtgttcaaaagagagtgttg 34861199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 92 - 248
Target Start/End: Complemental strand, 1977340 - 1977181
Alignment:
Q  92 actcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacc 188  Q
    |||||| || |||||||||||||| ||||||||||| |  |||||||||||||||||||| | |||||||||||| |||||||||||||   |||||| |    
T  1977340 actcactttttaacactctctctagcactcactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaattttcaaagtgtagatc 1977241  T
Q  189 tacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgtt 248  Q
     ||||||||||||| ||| || | |||||||||||||||| ||||||||||||| |||||    
T  1977240 cacaatgatttaaaccaataaaagagtgagtattagagagtgtgttcaaaagagtgtgtt 1977181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 17499389 - 17499247
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    ||||||||||||| |||||  ||||||| |||||||||||||| ||||| |||||| |||||||||||||||||||||   |||||| | ||||||||||    
T  17499389 aacactctctctagcactctatcttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatccacaatgattt 17499290  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagag 242  Q
    ||| ||| |||| |||||||||||||||| ||  |||||||||    
T  17499289 aaaccaataagagagtgagtattagagagagttgtcaaaagag 17499247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 8903876 - 8904025
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||||||||  |||||||  |||| | |||||||||||||||||| |||||||||||||| |||||||||||||   |||||||| ||||||||||    
T  8903876 aacactctctctagtactcacttgtttatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaattttcaaagtgtagacccacaatgattt 8903975  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| ||| |||| ||| |||| |||| | | |||||||||||||||||||    
T  8903976 aaaccaataagagagtaagtaatagaaaagatgttcaaaagagagtgttg 8904025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 16983403 - 16983567
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||||||| |||| ||||||||  |||| ||||| |||||| | ||||| ||| |||||||||  |||||||||||||   ||||    
T  16983403 caacactcacttttcaacactctatctagcactcactgatttattggataaaatcattttatgtcccatcactttgtgggggttcaattttcaaagtgta 16983502  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||  ||||||||||||| ||| |||| |||||||||||||||| ||||||||||||||||||||    
T  16983503 gactcacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttg 16983567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 32072121 - 32072255
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    ||||||||||||| |||||||||||||| |||||||||| ||||||||| |||||||||||||| ||||||||||| |   |||||||| ||||| ||||    
T  32072121 aacactctctctagcactcactcttttattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaattattt 32072220  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgtt 234  Q
    ||||||| |||| | || | ||||||||| |||||    
T  32072221 aaatcaataagagaatgggcattagagagagtgtt 32072255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 88 - 254
Target Start/End: Complemental strand, 24056096 - 24055927
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  ||| |||||| || ||||| ||||||||   |||||||| ||||||||| ||||||||||||||  ||||||||||||   ||||    
T  24056096 caacactcacttttcaacgctctctttagcactcgctcttttatcagatgaaattaatgtatgtcccaccactttgtgtaagttcaattttcaaagtgta 24055997  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttgatatg 254  Q
    |||| ||||| ||||||| ||| |||| ||||||| |||||||  |||||||||||||||||||| ||||    
T  24055996 gacccacaattatttaaaccaataagagagtgagtgttagagaaagtgttcaaaagagagtgttgttatg 24055927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 249
Target Start/End: Complemental strand, 9952913 - 9952765
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    ||||||||||||| |||||| | ||||| ||||||||||||||| |||| ||||||||||||||  ||||||||||||   |||| ||| ||||||||||    
T  9952913 aacactctctctagcactcatttttttattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaattttcaaagtgtaaacccacaatgattt 9952814  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| ||| |||| | ||||||||  |||| |||||| |||||||||||||    
T  9952813 aaaccaataagataatgagtatttaagagagtgttc-aaagagagtgttg 9952765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 5979904 - 5980052
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||||||||  |  ||||||| || ||||||| |||||||||||| |||||||||||||| |||||||||||||   |||  ||  |||||| |||    
T  5979904 aacactctctctagtagacactcttctattggatgagatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtgaactcacaatggttt 5980003  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
     || ||| |||| |||||||||||||||| ||||||||||||||||||||    
T  5980004 -aaccaataagagagtgagtattagagagagtgttcaaaagagagtgttg 5980052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 103 - 249
Target Start/End: Complemental strand, 36804995 - 36804846
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgtagacctacaatgattt 199  Q
    |||||||||||||| ||| ||| | ||| |||||| ||||||||||||| |||||| ||||||| ||||||||||||   || || | | ||||| ||||    
T  36804995 aacactctctctaatactaactatattattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaaatatacatccacaataattt 36804896  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||||||| |||| ||| ||||||||||||  |||| ||||||||||||||    
T  36804895 aaatcaataagagagtaagtattagagagaatgttgaaaagagagtgttg 36804846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 8914799 - 8914911
Alignment:
Q  107 ctctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaat 203  Q
    |||||||||||||||||||||| | ||||| ||| |||||||||| |||||||||||||| |||||| ||||||   |||||||| |||||||||||||     
T  8914799 ctctctctaacactcactctttcattggataaaaccaatgtatgtcccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaac 8914898  T
Q  204 caacaagaaagtg 216  Q
    ||| |||| ||||    
T  8914899 caataagagagtg 8914911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 245
Target Start/End: Complemental strand, 28414040 - 28413881
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  ||||||||||||| | |||||| ||||| | |||||||||||||||||| ||||||||||||||  ||||||||||||   | ||    
T  28414040 caacactcacttttcaacactctctctagcgctcacttttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtata 28413941  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagt 245  Q
    |||| | ||||||||||| ||| || | | |||||||||| | | ||||||||||||||||    
T  28413940 gacccataatgatttaaaccaataaaagaatgagtattag-gcgagtgttcaaaagagagt 28413881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 35151900 - 35151736
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| || ||||||||| | || || | ||||||||| |||||||||||||||||||| |||||| ||||||  | ||||||||| |   ||||    
T  35151900 caacactcactttttaacactctttttagcatttactcttttattggatgaaatcaatgtatgtcccaccattttgtggggattcaatttttaaagtgta 35151801  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||| ||| |||  || |||||||||| ||||| | || ||||||||||||||||||||    
T  35151800 gacccacaataattcaaactaataagaaagtgaatattaaatagagtgttcaaaagagagtgttg 35151736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 102 - 249
Target Start/End: Complemental strand, 6098932 - 6098784
Alignment:
Q  102 taacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatt 198  Q
    ||||||||||||||||||||||  |||||  ||||||||| |  |||| | |||||||||||||   ||||||||||||   |||||| | ||||| |||    
T  6098932 taacactctctctaacactcacatttttataggatgaaatta--gtatatcccaccactttgtgcatgttcaattttcaaagtgtagatccacaataatt 6098835  T
Q  199 taaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||||||| |||| ||||||||||||||||  |||| ||||||||||||||    
T  6098834 taaatcaataagagagtgagtattagagagaatgtttaaaagagagtgttg 6098784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 109 - 228
Target Start/End: Original strand, 43506566 - 43506687
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatca 205  Q
    |||||||||||||||| ||||| |||||  ||||||||||||| |||||||||||||| ||||| | |||||   |||||||| ||||||||||||  ||    
T  43506566 ctctctaacactcact-ttttattggatataatcaatgtatgttccaccactttgtgtgggttctactttcaatgtgtagacccacaatgatttaagcca 43506664  T
Q  206 acaagaaagtgagtattagagag 228  Q
    | |||| ||||||||||||||||    
T  43506665 ataagagagtgagtattagagag 43506687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 249
Target Start/End: Complemental strand, 13407479 - 13407330
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta-gacctacaatgattt 199  Q
    ||||||||||||||||| ||| ||||| ||||| |||||||||||||| |||||| |||  || ||||| |||||||   |||| |||| ||| ||||||    
T  13407479 acactctctctaacactaacttttttattggataaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtgtatgacccacattgattt 13407380  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||  |||  ||| | ||||| |||||||| ||||||||||||||||||||    
T  13407379 aacccaatgagagaatgagtgttagagagagtgttcaaaagagagtgttg 13407330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 234
Target Start/End: Original strand, 41727439 - 41727588
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||||||||| || || ||||||||||  | ||| |||||||||||||| ||||| |||||||| |||||  |||| |   ||||    
T  41727439 caacactcacttttgaacactctctttagcaatcactcttttgttagataaaatcaatgtatgtcccaccgctttgtgtaggttctgtttttaatgtgta 41727538  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgtt 234  Q
    |||  | ||||||||||| |||||||| |||||||||||||||| |||||    
T  41727539 gactcataatgatttaaaccaacaagagagtgagtattagagagagtgtt 41727588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 104 - 252
Target Start/End: Original strand, 45246459 - 45246610
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattta 200  Q
    ||||||||| || |||||||| ||||| ||||| ||||||||||||||  ||||||||| ||   |||| |||| ||   |||||| || ||||||||||    
T  45246459 acactctctttagcactcactattttattggataaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgattta 45246558  T
Q  201 aatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttgata 252  Q
    |||||| |||| || | ||||  ||||| || ||||||||||||||||||||    
T  45246559 aatcaataagagagggggtataggagagagtattcaaaagagagtgttgata 45246610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 31301153 - 31301216
Alignment:
Q  117 cactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||  |||| |||||||    
T  31301153 cactcactcttttattggatgaaatcaatgtatgttccaccactttgtgtgagttctattttca 31301216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 35689506 - 35689581
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||| |||  |||| |||||||    
T  35689506 cactctctctagcactcacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttca 35689581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 228
Target Start/End: Complemental strand, 17741686 - 17741555
Alignment:
Q  100 tctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatga 196  Q
    |||||||||||||||| |||  | |  |||| |||||||||||||||||||| |||||| ||||||   ||||||||||||   |||||||||| ||||     
T  17741686 tctaacactctctctagcacgtaattgtttattggatgaaatcaatgtatgtcccaccattttgtgagagttcaattttcaaagtgtagacctataatgg 17741587  T
Q  197 tttaaatcaacaagaaagtgagtattagagag 228  Q
    |||||| ||| ||  || ||||||||||||||    
T  17741586 tttaaaccaataaagaaatgagtattagagag 17741555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 6387591 - 6387659
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    |||||||||||||||||||||| ||||| |||||||||||||| |||||| ||| ||| ||||| ||||    
T  6387591 ctctctaacactcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccattt 6387659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 245
Target Start/End: Complemental strand, 7493503 - 7493353
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaa----tgtatgtgccaccactttgtgttgg-ttcaattttca---tgtagacctacaat 194  Q
    |||||||||||||||||| | | ||||| ||||||||||||     ||| |||   ||||||||||||||| ||| |||||||   |||||||  |||||    
T  7493503 aacactctctctaacacttatttttttattggatgaaatcatatattgtgtgtcttaccactttgtgttgggttctattttcaaagtgtagactcacaat 7493404  T
Q  195 gatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagt 245  Q
    |||||||| ||| |||| ||||||||||||| || ||||||| ||||||||    
T  7493403 gatttaaaccaataagagagtgagtattagaaagagtgttcataagagagt 7493353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 110 - 211
Target Start/End: Original strand, 35797426 - 35797530
Alignment:
Q  110 tctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaa 206  Q
    |||||| || ||||||||||| ||||| |||||||||||||| |||||||||||||   |||||||||| |   |||| | | |||||||||||||||||    
T  35797426 tctctagcattcactcttttattggataaaatcaatgtatgttccaccactttgtgcgagttcaatttttaaagtgtaaatccacaatgatttaaatcaa 35797525  T
Q  207 caaga 211  Q
     ||||    
T  35797526 taaga 35797530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 13856551 - 13856506
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||    
T  13856551 aacactctctctaacacccactcttttattggatgaaatcaatgta 13856506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 5727335 - 5727403
Alignment:
Q  180 atgtagac-ctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgt 247  Q
    |||||||| ||||||||||||||| ||| || |||||||||| ||||||||||||| |||||| |||||    
T  5727335 atgtagactctacaatgatttaaaccaataaaaaagtgagtactagagagggtgtttaaaagaaagtgt 5727403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 14236362 - 14236496
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||| | |||| |||||| | ||||| |||| ||||| ||  ||||| ||||||||||||||  |||||||||| |   ||||| |  ||||| ||||    
T  14236362 aacactttttctaccactcatttttttattggaagaaattaaaatatgtcccaccactttgtgtaagttcaattttgaaagtgtaggcgcacaataattt 14236461  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgtt 234  Q
    ||| |||||||| |||||||||||||||| |||||    
T  14236462 aaaccaacaagagagtgagtattagagagagtgtt 14236496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 16441963 - 16441919
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgt 147  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||    
T  16441963 aacactatctataacactcactcttttactggatgaaatcaatgt 16441919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 17915840 - 17915985
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttcatgtag-acctacaatgatttaa 201  Q
    |||| ||| ||||||||| ||||||||| | ||| |||  || | |||| | |||| |||||||||||| ||||||||   || || |||||||||||||    
T  17915840 aacattctatctaacacttactcttttattagataaaaataacgaatgtcctaccattttgtgttggtttaattttcaa--agtacttacaatgatttaa 17915937  T
Q  202 atcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |  || || |||||||||||||||||| ||||| |||| |||||||||    
T  17915938 actaataataaagtgagtattagagagagtgtttaaaaaagagtgttg 17915985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 16314431 - 16314372
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||| ||||||| ||||||||||||||| ||||| |||| ||||||||| ||||||||||    
T  16314431 aacattctctcttacactcactcttttattggataaaattaatgtatgttccaccacttt 16314372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 5095826 - 5095768
Alignment:
Q  190 acaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgtt 248  Q
    ||||||||||||| ||| |||| ||||||||||||||||| |||| ||||| |||||||    
T  5095826 acaatgatttaaaccaataagagagtgagtattagagaggatgtttaaaagtgagtgtt 5095768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 206
Target Start/End: Original strand, 17716881 - 17716981
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatca 205  Q
    |||| ||||||||||  ||||| |||||||||||||| ||||| |||| | ||| ||| |||| ||||||||   |||||||| ||||||| ||||||||    
T  17716881 ctctttaacactcacagttttattggatgaaatcaatatatgtcccactattttatgtgggtttaattttcaaagtgtagacccacaatgagttaaatca 17716980  T
Q  206 a 206  Q
    |    
T  17716981 a 17716981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 23685156 - 23685214
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||||||  | |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  23685156 acactctcttaagcactcactattttattggatgaaatcaatgtatgtcccaccacttt 23685214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 1961310 - 1961383
Alignment:
Q  107 ctctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||||||| |||| | ||||||| ||||| ||||||| ||| || ||||||||||| || |||||||||||||    
T  1961310 ctctctctaccacttaatcttttattggataaaatcaaggtacgtcccaccactttgcgtgggttcaattttca 1961383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 7599578 - 7599509
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttc 172  Q
    ||||||||||||| |||  ||||||||| |||||||||||||||||| | ||| |||||| ||| |||||    
T  7599578 aacactctctctagcacctactcttttattggatgaaatcaatgtatatcccagcactttatgtgggttc 7599509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 242
Target Start/End: Complemental strand, 11962850 - 11962696
Alignment:
Q  90 acactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtaga 186  Q
    |||||||| ||  ||||| |||| ||| ||||||||||||| || || ||||||| |||| | |||||| ||| ||| |||||||||||||   ||||||    
T  11962850 acactcacttttcaacacgctctttaatactcactcttttattgaataaaatcaaagtatatcccaccattttatgtaggttcaattttcaaagtgtaga 11962751  T
Q  187 cctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagag 242  Q
     | | ||||||||||| ||| || |||| ||||||||   || |||||||||||||    
T  11962750 tcca-aatgatttaaaccaataaaaaagcgagtattaacaagagtgttcaaaagag 11962696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 45218667 - 45218614
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||||||| |||||||| |||||||||||||||  ||| ||||||||||    
T  45218667 ctctctaacactcgctcttttattggatgaaatcaatgcgtgtcccaccacttt 45218614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 249
Target Start/End: Original strand, 9193421 - 9193555
Alignment:
Q  118 actcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaag 214  Q
    ||||| ||||||| | |||||||| | |||||||  ||| |||||||||  ||||||||||||   |||||||||||||| ||| ||| ||| || |||     
T  9193421 actcattcttttatttgatgaaattagtgtatgtctcactactttgtgtaagttcaattttcaaagtgtagacctacaataattaaaaccaataaaaaaa 9193520  T
Q  215 tgagtattagagagggtgttcaaaagagagtgttg 249  Q
    || ||||||  ||  |||| |||||||||||||||    
T  9193521 tgtgtattaatgatcgtgtacaaaagagagtgttg 9193555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 44709296 - 44709340
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||    
T  44709296 acactctctctaacactcactcttttattgtgtgaaatcaatgta 44709340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 9192025 - 9192100
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaatttt 178  Q
    ||||||| || ||| ||| ||||||| |  |||| |||||||||||| | |||||||||||||| |||||||||||    
T  9192025 aacactcactttaatacttactctttcatcggataaaatcaatgtatatcccaccactttgtgtgggttcaatttt 9192100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 29011079 - 29011137
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttg 163  Q
    |||||||||||||||||| ||| ||| |||||||||  ||||||||| | |||||||||    
T  29011079 cactctctctaacactcattctcttaatggatgaaactaatgtatgtcctaccactttg 29011137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 249
Target Start/End: Original strand, 34952504 - 34952616
Alignment:
Q  140 atcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttca 236  Q
    |||||||||||| |||||| ||||||    |||||||||||   ||||||||  |||||||||||| ||| |  ||| | |||||||||||| |||||||    
T  34952504 atcaatgtatgtcccaccattttgtgggatttcaattttcaatatgtagacccgcaatgatttaaaccaagagaaaaataagtattagagagagtgttca 34952603  T
Q  237 aaagagagtgttg 249  Q
    ||| | |||||||    
T  34952604 aaaaatagtgttg 34952616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 39023439 - 39023509
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccacca 158  Q
    |||||||||| || ||||  |||||||| |||||| |  |||| |||||||||||||||||||| ||||||    
T  39023439 caacactcacgttttaacggtctctctagcactcatttatttattggatgaaatcaatgtatgtcccacca 39023509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 14195225 - 14195266
Alignment:
Q  99 ttctaacactctctctaacactcactcttttactggatgaaa 140  Q
    |||||||||||||||||||||||| ||| ||| |||||||||    
T  14195225 ttctaacactctctctaacactcattctcttattggatgaaa 14195266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 16441828 - 16441873
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    |||||||||||||||||||||||||||| ||  ||||||| |||||    
T  16441828 aacactctctctaacactcactcttttattgagtgaaatctatgta 16441873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 9905839 - 9905879
Alignment:
Q  107 ctctctctaacactcactcttttactggatgaaatcaatgt 147  Q
    |||| |||||||  |||||||||||||||||||||||||||    
T  9905839 ctctttctaacatccactcttttactggatgaaatcaatgt 9905879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 249
Target Start/End: Original strand, 13214542 - 13214668
Alignment:
Q  126 ttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtatt 222  Q
    ||||| |||||| ||| ||||||||| ||| || ||||||| | |||||||||||   |||||||| |||||  | ||||  || |||| || |||||||    
T  13214542 ttttattggatggaattaatgtatgtcccatcattttgtgtagattcaattttcaaagtgtagacccacaatattataaactaataagagagcgagtatt 13214641  T
Q  223 agagagggtgttcaaaagagagtgttg 249  Q
    || ||| |||||||||| ||| |||||    
T  13214642 agggagagtgttcaaaatagaatgttg 13214668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 28700564 - 28700600
Alignment:
Q  90 acactcaccttctaacactctctctaacactcactct 126  Q
    |||||| | ||||||||||||||||||||||||||||    
T  28700564 acactctctttctaacactctctctaacactcactct 28700600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 26980433 - 26980269
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgta 184  Q
    |||||||||| ||  |||||||||||||| ||||||||| ||| |||||||||||||||||||| |||||| |||||||  |||||||||||   || ||    
T  26980433 caacactcacttttcaacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtgagttcaattttcaaaatata 26980334  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
     | | ||||||||||||||||| |||| ||||||||||| |||| ||||| ||||||||||||||    
T  26980333 catccacaatgatttaaatcaataagagagtgagtattatagagagtgttgaaaagagagtgttg 26980269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 104 - 245
Target Start/End: Complemental strand, 19101756 - 19101612
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattta 200  Q
    ||||||||| || |||||||| ||||| |||||||||||||||||||| |||||||||| ||   |||| |||||||   |||||| || ||||||||||    
T  19101756 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctattttcaaagtgtagatctgcaatgattta 19101657  T
Q  201 aatcaacaagaaagtgagtattagagagggtgttcaaaagagagt 245  Q
    || ||| ||||||||||||||||||||| ||||||||||||||||    
T  19101656 aaccaataagaaagtgagtattagagagagtgttcaaaagagagt 19101612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 102 - 243
Target Start/End: Complemental strand, 41948303 - 41948159
Alignment:
Q  102 taacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatt 198  Q
    ||||||| | ||||| ||||||||||||| ||||| |||||||||||| | | ||||||||||||||||||||||||||   |||| | | |||||||||    
T  41948303 taacactatttctaatactcactcttttattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatccacaatgatt 41948204  T
Q  199 taaatcaacaagaaagtgagtattagagagggtgttcaaaagaga 243  Q
    |||||||| |||| ||||||| |||||||| ||||||||||||||    
T  41948203 taaatcaataagagagtgagtgttagagagagtgttcaaaagaga 41948159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 6133795 - 6133632
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||| |||||||| ||||||| |||||| |||||||||||||| ||||| ||||||  |||||| |||||||||||||   | ||    
T  6133795 caacactcacttttcaacaatctctctagcactcacccttttattggatgaaatcaatatatgtcccaccatattgtgtgggttcaattttcaaagtcta 6133696  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
     ||| ||||||| ||||| ||| |||| ||||||||||||||||| |||||||||||||||||||    
T  6133695 cacccacaatga-ttaaaccaataagagagtgagtattagagaggatgttcaaaagagagtgttg 6133632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 109 - 248
Target Start/End: Original strand, 2225254 - 2225396
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatca 205  Q
    ||||||| ||| |||||||||| |||||||||||||||||||| |||||||||||||| |||||  ||| ||   |||||||| ||| ||||||||| ||    
T  2225254 ctctctagcacccactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcggtttacaaagtgtagaccgacagtgatttaaacca 2225353  T
Q  206 acaagaaagtgagtattagagagggtgttcaaaagagagtgtt 248  Q
    | |||||||||||||| | | || |||||||||||||||||||    
T  2225354 ataagaaagtgagtatcacaaagcgtgttcaaaagagagtgtt 2225396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 33193073 - 33193212
Alignment:
Q  102 taacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatt 198  Q
    ||||| ||||| ||| |||||||  |||| ||||||||||||||||||||||||||| ||||||  |||||||||||||   |||||||| |||||||||    
T  33193073 taacattctctataatactcacttatttattggatgaaatcaatgtatgtgccaccattttgtgagggttcaattttcaaagtgtagacccacaatgatt 33193172  T
Q  199 taaatcaacaagaaagtgagtattagagagggtgttcaaa 238  Q
    |||| ||| |||| | |||||||||||||  |||||||||    
T  33193173 taaaccaataagagaatgagtattagagaaagtgttcaaa 33193212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 29673499 - 29673633
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||||||||||||||| | ||||| ||||| |||||||| ||||| |||||| ||||||| | |||||||||||   |||||| ||||||| ||||    
T  29673499 aacactctctctaacactcattattttattggataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtagaactacaattattt 29673598  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgtt 234  Q
    ||| ||| || |||||||||||||||||| |||||    
T  29673599 aaaccaataaaaaagtgagtattagagagagtgtt 29673633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 248
Target Start/End: Original strand, 25543349 - 25543511
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttcatgt--ag 185  Q
    |||||||||| ||  |||||||||||||||||| ||||||||| | |||||||||||| ||||| |||||||||||||| |||  | |    ||||  ||    
T  25543349 caacactcacttttaaacactctctctaacacttactcttttatttgatgaaatcaatatatgtcccaccactttgtgtaggtatattcccaatgtgcag 25543448  T
Q  186 acctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgtt 248  Q
     |  ||||||||||||| ||| |||| |||||||||||||||| |||||||||||||||||||    
T  25543449 cctcacaatgatttaaaccaataagatagtgagtattagagagagtgttcaaaagagagtgtt 25543511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 119 - 249
Target Start/End: Complemental strand, 30679051 - 30678918
Alignment:
Q  119 ctcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagt 215  Q
    |||||||||| | ||||| |||||||||||||| |||||||||||||| |||||||||||||   |||||||  ||||||||||||  ||| |||| |||    
T  30679051 ctcactctttcaatggataaaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtagactcacaatgatttaagccaataagagagt 30678952  T
Q  216 gagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| |||||||| ||| |||||| |||||||||    
T  30678951 gagtgttagagagagtgctcaaaaaagagtgttg 30678918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 107 - 249
Target Start/End: Complemental strand, 28218200 - 28218053
Alignment:
Q  107 ctctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaat 203  Q
    |||||| || || ||||||||||| ||||||||||||||||||||  ||||||||||||| | |||||||||||   |||||| | ||| | ||||||||    
T  28218200 ctctctttagcattcactcttttattggatgaaatcaatgtatgtctcaccactttgtgtggattcaattttcaaagtgtagaaccacagtaatttaaat 28218101  T
Q  204 caacaagaaagtgagtattagagagg--gtgttcaaaagagagtgttg 249  Q
     || |||| |||||||||||||| ||  ||||||||||||||||||||    
T  28218100 taataagatagtgagtattagagcgggagtgttcaaaagagagtgttg 28218053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 88 - 241
Target Start/End: Complemental strand, 10659940 - 10659784
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactgg-atgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgt 183  Q
    |||||||||| ||  || ||||||||||||||||||| ||||  ||| |||||||||||| |||| | |||||||||||| |||||||||||||   |||    
T  10659940 caacactcacttttcaatactctctctaacactcactttttttatgggatgaaatcaatggatgtccgaccactttgtgtaggttcaattttcaaagtgt 10659841  T
Q  184 agacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaaga 241  Q
    ||||| || |||||||||| ||| |||| |||| ||||||||||  ||||||||||||    
T  10659840 agacccacgatgatttaaaccaataagagagtg-gtattagagaaagtgttcaaaaga 10659784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 103 - 249
Target Start/End: Complemental strand, 32211940 - 32211791
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    ||||||||||| | |||||||||||||| | |||||||||||||||||| | || |||||||||  |||||||||| |   |||||||| ||||||||||    
T  32211940 aacactctctccagcactcactcttttattagatgaaatcaatgtatgtccaactactttgtgtgagttcaatttttaaggtgtagacccacaatgattt 32211841  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| ||| |||| |||||  |||| |||  ||||| ||||||||||||||    
T  32211840 aaaccaataagagagtgatcattaaagaaagtgttgaaaagagagtgttg 32211791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 11987635 - 11987799
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  ||||||||||| |||| | | || |||| |||||||||| ||||||||| ||||||||| |||  |||||||||||||   ||||    
T  11987635 caacactcacttttcaacactctctccaacatttattcatttattggatgaaattaatgtatgttccaccacttagtgcgggttcaattttcaaagtgta 11987734  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| ||||||||||||| ||  |||| ||||  ||||||| || ||||| ||||||||||||||    
T  11987735 gacccacaatgatttaaaccattaagagagtggatattagaaagagtgtttaaaagagagtgttg 11987799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 41958121 - 41958241
Alignment:
Q  117 cactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaa 213  Q
    ||||||||| |||| |||||||||||||||||||| |||||| ||||||  |||||||||||||   |||||||| ||| ||||||||| ||| |||| |    
T  41958121 cactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgggggttcaattttcaaagtgtagacccacagtgatttaaaccaataagaga 41958220  T
Q  214 gtgagtattagagagggtgtt 234  Q
    |||||||||||| || |||||    
T  41958221 gtgagtattagaaagagtgtt 41958241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 103 - 234
Target Start/End: Original strand, 44271942 - 44272076
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||||| || |||| ||| ||||| || ||||||||||||||||| |||||| ||| ||| |||||||||||||   |||||| | ||||||||||    
T  44271942 aacactctctttagcacttactattttattgaatgaaatcaatgtatgttccaccattttttgtaggttcaattttcaaagtgtagaacaacaatgattt 44272041  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgtt 234  Q
    ||||||| || ||| ||||||||||| || |||||    
T  44272042 aaatcaataaaaaaatgagtattagaaagagtgtt 44272076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 249
Target Start/End: Original strand, 8899023 - 8899187
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  |||| || ||||||||||  || ||| | | |||||||| || |||||| ||||| |||||||| |||||||||||||   ||||    
T  8899023 caacactcacttttcaacattccctctaacacttgctatttaattagatgaaataaaggtatgtcccacccctttgtgtgggttcaattttcaaagtgta 8899122  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |  | ||||| ||||||| ||| |||| |||||||||||||||| |||||||||||||| |||||    
T  8899123 ggtccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagagattgttg 8899187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 15928579 - 15928726
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    ||||||||||||| ||| |||||||||| | |||| |||  ||||||||  ||||| |||||||  |||| |||||||   ||||||| |||| ||||||    
T  15928579 aacactctctctagcacccactcttttatttgatggaattcatgtatgtctcaccattttgtgtgagttctattttcaaggtgtagacttacagtgattt 15928678  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| ||| || | |||||||||||||||  ||||||||||||||||||||    
T  15928679 aaaccaataaaagagtgagtattagaga--gtgttcaaaagagagtgttg 15928726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 120 - 249
Target Start/End: Complemental strand, 8741362 - 8741230
Alignment:
Q  120 tcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtg 216  Q
    ||||| ||||| ||||||||||||||||||||  ||| | ||||||| |||||||||||||   | || ||  |||||||||||||  || |||| ||||    
T  8741362 tcacttttttattggatgaaatcaatgtatgtctcactaatttgtgtgggttcaattttcaaagtataaacacacaatgatttaaactaataagagagtg 8741263  T
Q  217 agtattagagagggtgttcaaaagagagtgttg 249  Q
    |||||||||||   |||||||||||||||||||    
T  8741262 agtattagagaaattgttcaaaagagagtgttg 8741230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 103 - 249
Target Start/End: Complemental strand, 14094157 - 14094007
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta-gacctacaatgatt 198  Q
    ||||||||||| | |||||||| ||||| ||| |||||||||||||||| |||||||||| ||| ||||| |||| ||   |||| | |||||| |||||    
T  14094157 aacactctctccagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatt 14094058  T
Q  199 taaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    | | ||||  | ||||||||| ||| | || ||||||||||||||||||||    
T  14094057 tcactcaatcaaaaagtgagtgttacaaagagtgttcaaaagagagtgttg 14094007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 103 - 245
Target Start/End: Complemental strand, 37553105 - 37552962
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    ||||||||||||| |||| ||| | ||| |||||||||| ||||| ||| ||| ||||||  || ||||  |||||||   |||||| | ||||||||||    
T  37553105 aacactctctctagcacttactttcttattggatgaaattaatgtttgtcccatcacttttagtgggttttattttcaaagtgtagatccacaatgattt 37553006  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagt 245  Q
    ||||||| |||| ||||||||||| |||  ||||||||||||||||    
T  37553005 aaatcaataagagagtgagtattaaaga--gtgttcaaaagagagt 37552962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 50539160 - 50539224
Alignment:
Q  115 aacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc 179  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||||| ||| ||||||||||||    
T  50539160 aacactcactcttttattggatgaaatcaaagtatgttccaccactttatgtgggttcaattttc 50539224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 27570233 - 27570398
Alignment:
Q  87 tcaacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgt 183  Q
    |||||| |||| || ||||||||||||| ||||||| ||||||| ||| |||||| ||  ||||| |||||| |||||||  ||| |||||| |   |||    
T  27570233 tcaacagtcactttttaacactctctctgacactcattcttttattggttgaaattaagatatgtcccaccaatttgtgtgagtttaatttttaaagtgt 27570332  T
Q  184 agacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    | ||| |||||||||| ||  || |||||||||| | | |||||| |||||||||||||| |||||    
T  27570333 aaacccacaatgatttgaactaataagaaagtgaatttgagagagagtgttcaaaagagaatgttg 27570398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 249
Target Start/End: Complemental strand, 41095763 - 41095615
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta-gacctacaatgattta 200  Q
    ||||||||||| ||||||||| |||| ||| |||||||||||||||| ||| |||| ||||| ||||| |||||||   |||| | |||||| ||||||     
T  41095763 cactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccatcactctgtgtgggttccattttcaaagtgtaggtcctacattgatttc 41095664  T
Q  201 aatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |  ||| ||  ||||||||  ||||||| ||| ||||||||||||||||    
T  41095663 acccaataaataagtgagtgctagagagagtgctcaaaagagagtgttg 41095615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 50773263 - 50773193
Alignment:
Q  107 ctctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||| ||| ||||| ||||    
T  50773263 ctctctctaacactcactcttttattggataaaatcaatatatgttccaccactttatgtgggttccattt 50773193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 32848739 - 32848662
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||||||||||| |||||||||||||| ||| |||||||| ||||||| |||||||||| ||| | ||| |||||||    
T  32848739 aacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccaccactttatgtggattccattttca 32848662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 11135765 - 11135837
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    ||||||||||| |||||||| ||||| ||| |||||||||||||||| |||||||||| ||| ||||| ||||    
T  11135765 cactctctctagcactcactattttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 11135837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 11430467 - 11430539
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    |||||| |||| |||||||||||||| ||| |||||||||||||||| |||||||||| ||| ||||| ||||    
T  11430467 cactctttctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 11430539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 49730888 - 49730990
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||||| ||||||||||||||||| | ||| |||  ||| |||||  ||| ||||||||| |||||||||||||   |||||||| ||||||||||    
T  49730888 aacactctctataacactcactcttttattagattaaactaatatatgtcacactactttgtgtgggttcaattttcaaagtgtagacccacaatgattt 49730987  T
Q  200 aaa 202  Q
    |||    
T  49730988 aaa 49730990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 249
Target Start/End: Complemental strand, 13114825 - 13114676
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgta-gacctacaatgattt 199  Q
    ||||||||||||||||||||||||||| | ||| |||||||| ||||| |||||||||| | | | ||| |||| |   |||||  ||| ||| ||||||    
T  13114825 acactctctctaacactcactcttttattagataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtataacccacattgattt 13114726  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||  |||  ||| ||||||| |||||||| |||| |||||||||||||||    
T  13114725 aacccaatgagatagtgagtgttagagagagtgtccaaaagagagtgttg 13114676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 18157062 - 18157121
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||||||||||| |||| ||||| |||||||||| ||||||||| ||||||||||    
T  18157062 aacactctctctaacacccacttttttattggatgaaattaatgtatgtcccaccacttt 18157121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 35336896 - 35337018
Alignment:
Q  111 ctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgtagacctacaatgatttaaatcaac 207  Q
    ||||| |||||| | ||||| |||||||||||||||| |    ||||||||||||| ||||||||||||   ||||||||  ||||||||||||| |||     
T  35336896 ctctagcactcattattttattggatgaaatcaatgtct----caccactttgtgtgggttcaattttcttaatgtagacacacaatgatttaaaccaat 35336991  T
Q  208 aagaaagtgagtattagagagggtgtt 234  Q
    |||| |  ||||||||||||| |||||    
T  35336992 aagagaacgagtattagagagagtgtt 35337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 41918025 - 41918096
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||||| |||||||||||||| ||| |||||||||||||||| |||||||||| ||| | ||| |||||||    
T  41918025 ctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccattttca 41918096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 115 - 244
Target Start/End: Original strand, 15468256 - 15468388
Alignment:
Q  115 aacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttcat---gtagacctacaatgatttaaatcaacaaga 211  Q
    |||||||||||||||| |  ||  |||||||||||||  ||  ||||||||| ||||||||||||||   ||||||| ||||| |||||||| || || |    
T  15468256 aacactcactcttttattaaatagaatcaatgtatgtctcattactttgtgtgggttcaattttcatagtgtagacccacaataatttaaattaataaaa 15468355  T
Q  212 aagtgagtattagagagggtgttcaaaagagag 244  Q
     ||| |||||| ||||  |||||||||||||||    
T  15468356 gagtaagtatttgagatagtgttcaaaagagag 15468388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 15523235 - 15523293
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||| || |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  15523235 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccacttt 15523293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 15531229 - 15531287
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||| || |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  15531229 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccacttt 15531287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 21466680 - 21466630
Alignment:
Q  196 atttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtg 246  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||||||||    
T  21466680 atttaaatcaataagaaagtgaatattagagagagtgttcaaaagagagtg 21466630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 22540393 - 22540451
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||| || |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  22540393 acactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccacttt 22540451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 115 - 228
Target Start/End: Complemental strand, 45179390 - 45179274
Alignment:
Q  115 aacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaaga 211  Q
    |||||||| || |||| || || |||||||||||||| ||| |||||||||  |||||||||||||   |||| ||| ||||| | |||||| || ||||    
T  45179390 aacactcattcatttattgaataaaatcaatgtatgttccatcactttgtgagggttcaattttcaaagtgtaaacccacaataacttaaattaataaga 45179291  T
Q  212 aagtgagtattagagag 228  Q
    || ||||||||||||||    
T  45179290 aaatgagtattagagag 45179274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 4578727 - 4578674
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||||||||||||||||||| ||| ||||||||||||| || ||||||||||    
T  4578727 ctctctaacactcactcttttattgggtgaaatcaatgtaggtcccaccacttt 4578674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 39974267 - 39974207
Alignment:
Q  189 tacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||||||||||||| ||| |||| ||||||||||||| ||  |||||||||||||||||||    
T  39974267 tacaatgatttaaaccaataagagagtgagtattagaaagaatgttcaaaagagagtgttg 39974207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 198
Target Start/End: Complemental strand, 3872804 - 3872692
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  ||||||||||||| ||||||||||| || |  || |||||||| |||||  ||||||||||||| |||||||||| ||   ||||    
T  3872804 caacactcacttttcaacactctctctagcactcactcttctattaaat-aaatcaatatatgtcacaccactttgtgtaggttcaatttccaaagtgta 3872706  T
Q  185 gacctacaatgatt 198  Q
    |||| |||||||||    
T  3872705 gacccacaatgatt 3872692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 16948595 - 16948536
Alignment:
Q  190 acaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||||||||||||||||| |||| |||||||||||||||   ||||||| |||||||||||    
T  16948595 acaatgatttaaatcaataagagagtgagtattagagaaaatgttcaacagagagtgttg 16948536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 225
Target Start/End: Original strand, 931383 - 931523
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---atgta 184  Q
    |||||||||| ||  ||| || ||||||| ||||||||||||| || ||| || |||||||||| ||| || ||| ||| ||||||||||||   || ||    
T  931383 caacactcacttttcaactctatctctaatactcactcttttattgaatggaagcaatgtatgtcccatcattttttgtgggttcaattttcaaaatata 931482  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattaga 225  Q
     ||| ||||||||||||| ||| || | ||||| |||||||    
T  931483 cacccacaatgatttaaaccaataaaagagtgaatattaga 931523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 13388361 - 13388403
Alignment:
Q  106 actctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  13388361 actctctctaacactcacttttttattggatgaaatcaatgta 13388403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 24886057 - 24886099
Alignment:
Q  99 ttctaacactctctctaacactcactcttttactggatgaaat 141  Q
    |||||||||||||||||||||||||||||||| ||| ||||||    
T  24886057 ttctaacactctctctaacactcactcttttattgggtgaaat 24886099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 37525560 - 37525655
Alignment:
Q  110 tctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaa 202  Q
    ||||||||| ||||||||| | ||||| ||| | |||||||| |||||| ||| ||| |||||||||||||   | |||| |||||||||||||||    
T  37525560 tctctaacattcactctttcattggataaaacccatgtatgttccaccattttatgtgggttcaattttcaaagtctagatctacaatgatttaaa 37525655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 43851185 - 43851113
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttcat 181  Q
    |||||||  |||||||| |||| ||| |||||||||||||||| |||||||||| | | ||||| ||||||||    
T  43851185 ctctctagtactcactcatttattgggtgaaatcaatgtatgtcccaccactttatatgggttccattttcat 43851113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 12767392 - 12767341
Alignment:
Q  192 aatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagaga 243  Q
    ||||||||||| ||| || | ||||||||||||||||||| |||||||||||    
T  12767392 aatgatttaaaccaataaaagagtgagtattagagagggttttcaaaagaga 12767341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 14341077 - 14341018
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||||||||||||||||| | ||||| |||||||||  ||| ||||| ||||||||||    
T  14341077 aacactctctctaacactcatttttttattggatgaaactaatatatgtcccaccacttt 14341018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 15660929 - 15660976
Alignment:
Q  115 aacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||||||||||||| ||||| ||||||||| |||| ||||||||||    
T  15660929 aacactcactcttttattggataaaatcaatgcatgtcccaccacttt 15660976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 248
Target Start/End: Original strand, 28109894 - 28110040
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca--tgtaga-cctacaatgatttaa 201  Q
    |||| |||||| |||||||| ||||| ||| ||||||||||| |||| |||||| ||| ||| ||||| ||||  |  |||||| |||| |||||||| |    
T  28109894 cactttctctagcactcacttttttattgggtgaaatcaatgcatgttccaccattttatgtgggttccatttcaaagtgtagatcctagaatgatttca 28109993  T
Q  202 atcaacaagaaagtgagtattagagagggtgttcaaaagagagtgtt 248  Q
      ||| || |||||||||||||||||  ||  | |||||||||||||    
T  28109994 tccaataaaaaagtgagtattagagaaagtacttaaaagagagtgtt 28110040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 44739142 - 44739201
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||||||| |||||||||||||  ||  |||||| ||||||||| ||||||||||    
T  44739142 aacactctctctagcactcactcttttcttgagtgaaattaatgtatgtcccaccacttt 44739201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 106 - 145
Target Start/End: Complemental strand, 50425019 - 50424980
Alignment:
Q  106 actctctctaacactcactcttttactggatgaaatcaat 145  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  50425019 actctctctaacactcactcttttattggataaaatcaat 50424980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 11135895 - 11135853
Alignment:
Q  106 actctctctaacactcactcttttactggatgaaatcaatgta 148  Q
    |||||||||| |||||||||||||| ||| |||||||||||||    
T  11135895 actctctctagcactcactcttttattgggtgaaatcaatgta 11135853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 31074722 - 31074838
Alignment:
Q  85 tatcaacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttc---at 181  Q
    ||||||||||||  ||  ||||||||| |||||| | ||||||||| | ||||||||||||  |||| | | |||||| ||||| ||| ||||||   ||    
T  31074722 tatcaacactcatgtttgaacactctccctaacatttactcttttatttgatgaaatcaatacatgtcctaacactttatgttgattctattttcaaaat 31074821  T
Q  182 gtagacctacaatgatt 198  Q
    ||||||| |||||||||    
T  31074822 gtagacccacaatgatt 31074838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 9165340 - 9165385
Alignment:
Q  117 cactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||||||||||| ||| |||||||||||||||| | ||||||||    
T  9165340 cactcactcttttattgggtgaaatcaatgtatgtcctaccacttt 9165385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 13388481 - 13388436
Alignment:
Q  117 cactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||||||||||| ||| ||||||||||||||||  |||||||||    
T  13388481 cactcactcttttattgggtgaaatcaatgtatgtctcaccacttt 13388436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 19078931 - 19078972
Alignment:
Q  99 ttctaacactctctctaacactcactcttttactggatgaaa 140  Q
    |||||||||||||||||||||||||||| ||| ||| |||||    
T  19078931 ttctaacactctctctaacactcactctcttattgggtgaaa 19078972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 19126819 - 19126860
Alignment:
Q  99 ttctaacactctctctaacactcactcttttactggatgaaa 140  Q
    |||||||||||||||||||||||||||| ||| ||| |||||    
T  19126819 ttctaacactctctctaacactcactctcttattgggtgaaa 19126860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 28274810 - 28274847
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaa 140  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  28274810 aacactctctctaacactcactctcttattggatgaaa 28274847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 5602709 - 5602657
Alignment:
Q  110 tctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||||| ||||| ||| |||||||||| ||| ||||| ||||||||||    
T  5602709 tctctaacacttactctcttattggatgaaattaatatatgtcccaccacttt 5602657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 36566925 - 36566997
Alignment:
Q  108 tctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    ||||| ||||||| ||| ||||| ||||||||||||||||||||  || |||||| | | ||||| |||||||    
T  36566925 tctctttaacacttactattttattggatgaaatcaatgtatgtctcatcactttatttgggttctattttca 36566997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 36567027 - 36567059
Alignment:
Q  213 agtgagtattagagagggtgttcaaaagagagt 245  Q
    |||||||||||||||| ||||||||||||||||    
T  36567027 agtgagtattagagagtgtgttcaaaagagagt 36567059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 39019704 - 39019740
Alignment:
Q  213 agtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||||||||||||||  ||||||||||||||||||||    
T  39019704 agtgagtattagagaaagtgttcaaaagagagtgttg 39019740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 39039526 - 39039470
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaa 144  Q
    |||||||||| ||  |||||||| | || |||||||||||||| |||||||||||||    
T  39039526 caacactcacttttcaacactctttttagcactcactcttttattggatgaaatcaa 39039470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 243
Target Start/End: Original strand, 39499433 - 39499564
Alignment:
Q  117 cactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaa 213  Q
    |||||||||||| | | ||| ||||||||||||||   | |||||| |||  ||||||||||||   |||||| | |||||||||||| |||| ||||||    
T  39499433 cactcactcttt-attagataaaatcaatgtatgtcatatcactttttgtgagttcaattttcaaaatgtagatccacaatgatttaattcaataagaaa 39499531  T
Q  214 gtg---agtattagagagggtgttcaaaagaga 243  Q
    |||   | ||||||||| | |||||||||||||    
T  39499532 gtgaatactattagagaagatgttcaaaagaga 39499564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 106 - 249
Target Start/End: Complemental strand, 28490875 - 28490729
Alignment:
Q  106 actctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaa 202  Q
    |||||||||| || ||||| ||||| ||||||||||||| |||||| ||||||||||||||  |||||||||| |   |||||||| ||||| |||||||    
T  28490875 actctctctagcattcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaattttgaaagtgtagacccacaataatttaaa 28490776  T
Q  203 tcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
     ||| |||| |||||||||||||||| ||||||||||||||||||||    
T  28490775 ccaataagagagtgagtattagagagagtgttcaaaagagagtgttg 28490729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 10142118 - 10141998
Alignment:
Q  117 cactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaa 213  Q
    |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||   |||||||| ||||| ||||||||||| |||| |    
T  10142118 cactcactcttttattggataaaatcaatgtatgtcccaccactttgtgttggttccattttcaaagtgtagaccaacaattatttaaatcaataagaga 10142019  T
Q  214 gtgagtattagagagggtgtt 234  Q
    |||||| |||||||| |||||    
T  10142018 gtgagtgttagagagagtgtt 10141998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 118 - 249
Target Start/End: Complemental strand, 5413878 - 5413741
Alignment:
Q  118 actcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaag 214  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| ||   |||||||| | ||||||||||| ||| || ||||    
T  5413878 actcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtagacccataatgatttaaaccaataaaaaag 5413779  T
Q  215 tgagtatta---gagagggtgttcaaaagagagtgttg 249  Q
    |||||||||    |||| ||||||||||||||||||||    
T  5413778 tgagtattatagtagagagtgttcaaaagagagtgttg 5413741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 34368384 - 34368533
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||| ||||||||||||||||||| | ||||| ||| |||||||||| |||||||||||||| |||||| ||||||   |||||||| ||||||||||    
T  34368384 aacactttctctaacactcactctttcattggataaaaccaatgtatgttccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgattt 34368483  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| ||| |||| |||| ||   |||||| ||| ||||||||||||||||    
T  34368484 aaaccaataagagagtgggtgacagagagagtgctcaaaagagagtgttg 34368533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 28434972 - 28434846
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||||||||||||| | ||||||| ||||| |||||||| ||||| |||||||  |||||||||||||||||||   | |||||| ||||||||||    
T  28434972 aacactctctctaacactaattcttttattggataaaatcaatatatgtcccaccac--tgtgttggttcaattttcaaagtttagacccacaatgattt 28434875  T
Q  200 aaatcaacaagaaagtgagtattagagag 228  Q
    ||| ||| |||||| ||||||||||||||    
T  28434874 aaaccaataagaaaatgagtattagagag 28434846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 249
Target Start/End: Complemental strand, 41105726 - 41105577
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||||| ||| ||| ||||||||| ||||||||||||| | |||| |||| ||||||||| |||||||||||||   || | ||| ||| ||||||    
T  41105726 aacactctctataaaacttactcttttattggatgaaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtgcatacccacagtgattt 41105627  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    ||| ||| |||| || ||||||||||||| ||| ||||||||||||||||    
T  41105626 aaaccaataagagagcgagtattagagagagtgctcaaaagagagtgttg 41105577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 104 - 247
Target Start/End: Complemental strand, 30326029 - 30325883
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattta 200  Q
    ||||||||| || |||||||| ||||| ||||||||||||||||||||  ||||||||| ||   |||| || | ||   |||||| |  ||||||||||    
T  30326029 acactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctccaaagtgtagatccgcaatgattta 30325930  T
Q  201 aatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgt 247  Q
    || ||| ||||||||||||||||||||| ||||||||||||||||||    
T  30325929 aaccaataagaaagtgagtattagagagagtgttcaaaagagagtgt 30325883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 37455359 - 37455525
Alignment:
Q  89 aacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtag 185  Q
    ||||||||  || |||||||||||||| ||| ||||| |||| | ||| |||||||||||||| |||||| ||||||  |||||||||||||   |||||    
T  37455359 aacactcattttttaacactctctctagcacacactcatttattcgataaaatcaatgtatgttccaccattttgtgggggttcaattttcaaagtgtag 37455458  T
Q  186 acctacaatgatttaaatcaacaagaaagtgagtattaga----gagggtgttcaaaagagagtgttg 249  Q
    ||  ||||| | ||||| ||| |||| |||||||||||||    ||||||||||||||||||||||||    
T  37455459 actcacaat-aattaaaccaataagagagtgagtattagagagggagggtgttcaaaagagagtgttg 37455525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 17537258 - 17537130
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    ||||||||||||| |||||||||||||| | ||| |||||||||||||| |||||| ||| |||||||| ||||||||   |||||| | | ||||||||    
T  17537258 aacactctctctatcactcactcttttatttgatcaaatcaatgtatgtcccaccaatttttgttggtttaattttcaaagtgtagatccataatgattt 17537159  T
Q  200 aaatcaacaagaaagtgagtattagagag 228  Q
    ||| ||| |||| ||||| ||| ||||||    
T  17537158 aaaccaataagagagtgaatataagagag 17537130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 41330531 - 41330407
Alignment:
Q  121 cactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtga 217  Q
    |||||||||| | |||||||| ||||||||| ||| |||||||||| |||||||||||||   |||||||  ||||||||||||| ||| ||||||   |    
T  41330531 cactcttttattagatgaaattaatgtatgtcccatcactttgtgtaggttcaattttcaaagtgtagactcacaatgatttaaaccaataagaaatgta 41330432  T
Q  218 gtattagagagggtgttcaaaagag 242  Q
    |||||| |||| |||||||||||||    
T  41330431 gtattaaagagtgtgttcaaaagag 41330407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 246
Target Start/End: Complemental strand, 34384862 - 34384701
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||| ||||| || ||| ||| ||| ||||||||| ||||||| ||| |||||||||||||||| |||| | |||||||  ||||||||||||   | ||    
T  34384862 caacgctcactttttaatactttctttaacactcattcttttattgggtgaaatcaatgtatgtcccactattttgtgtgagttcaattttcaaattata 34384763  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtg 246  Q
    |||  ||||||||||| | | | || | ||||||||||| |||| |||||||||||||||||    
T  34384762 gactcacaatgatttagaccgataaaagagtgagtattaaagagagtgttcaaaagagagtg 34384701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 104 - 252
Target Start/End: Complemental strand, 27592607 - 27592456
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattta 200  Q
    ||||||||| || |||||||| ||||| ||||||||||||||||||||  ||||||||| ||   |||| |||| ||   |||||| || ||||||||||    
T  27592607 acactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgattta 27592508  T
Q  201 aatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttgata 252  Q
    || ||| |||| |||| |||   ||||| || ||||||||||||||||||||    
T  27592507 aaccaataagagagtgggtacaggagagagtattcaaaagagagtgttgata 27592456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 43405431 - 43405543
Alignment:
Q  117 cactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaa 213  Q
    |||||||||||||| || |||||||||||||||||  ||||||||||| |  |||| |||| ||   |||||||| ||||||||||||||||| |||| |    
T  43405431 cactcactcttttattgaatgaaatcaatgtatgtctcaccactttgtatatgttctatttccaaagtgtagacccacaatgatttaaatcaataagaga 43405530  T
Q  214 gtgagtattagag 226  Q
    |||| ||| ||||    
T  43405531 gtgaatatcagag 43405543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 42224745 - 42224673
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattt 177  Q
    ||||||||||| |||||||||||||| | | |||||||||||||||| |||||||||| ||| ||||| ||||    
T  42224745 cactctctctagcactcactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttccattt 42224673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 219
Target Start/End: Complemental strand, 10253232 - 10253124
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttcatgtagacctacaatgatttaaatcaaca 208  Q
    ||||||||||||||||||| || |||||||||| ||||||||| |||||||||| |||  |||| |||| ||  ||  || |||| |||||||| ||| |    
T  10253232 ctctctaacactcactcttctattggatgaaattaatgtatgtcccaccactttatgtgagttctatttcca--taatcccacaacgatttaaaccaata 10253135  T
Q  209 agaaagtgagt 219  Q
    |||||||||||    
T  10253134 agaaagtgagt 10253124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 28223947 - 28223783
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  ||||||  || ||||||| | ||||||| || ||||||| | ||||||| |  | | ||||||| || ||||||||||   | ||    
T  28223947 caacactcacttttcaacactacctttaacacttattcttttattgaatgaaattattgtatgttcaccaattttgtgtgggctcaattttcaaagtata 28223848  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||| | ||||||||||| ||| || | ||||||||||||||||| |||||||||||| ||||||    
T  28223847 gacccataatgatttaaaccaataaaagagtgagtattagagaggatgttcaaaagagggtgttg 28223783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 249
Target Start/End: Complemental strand, 28611949 - 28611785
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgta 184  Q
    |||||||||| ||  | |||||||||||||| ||||||||| | |||||  || || ||||||| ||| |||||||| |  |||| ||||| |   ||||    
T  28611949 caacactcacttttgagcactctctctaacattcactctttcattggatataaccagtgtatgtcccatcactttgtatgagttccatttttaaagtgta 28611850  T
Q  185 gacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||  ||||||||||||||||| || | |||  || |||||||| ||| ||||||||||||||||    
T  28611849 gacgcacaatgatttaaatcaataaaagagttggtgttagagagagtgctcaaaagagagtgttg 28611785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 39246638 - 39246750
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatca 205  Q
    |||||||||| ||||| | ||| ||||| |||||||||||||| ||||||||||||||  ||||| ||||||   |||||||| |||||  |||||| ||    
T  39246638 ctctctaacaatcactttcttattggataaaatcaatgtatgtcccaccactttgtgtgagttcagttttcaaagtgtagacccacaatactttaaacca 39246737  T
Q  206 acaagaaagtgag 218  Q
    | |||| ||||||    
T  39246738 ataagagagtgag 39246750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 25564090 - 25564033
Alignment:
Q  115 aacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttc 172  Q
    ||||||||| |||||| |||||||||| ||||||||| |||||||||||||| |||||    
T  25564090 aacactcacccttttattggatgaaataaatgtatgttccaccactttgtgtgggttc 25564033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 40971607 - 40971550
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||||| |||||||||||||| ||  |||||||||||||||| ||||||||||    
T  40971607 cactctctctagcactcactcttttattgagtgaaatcaatgtatgtcccaccacttt 40971550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 234
Target Start/End: Complemental strand, 25710628 - 25710494
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgattt 199  Q
    |||||||||| || |||||||||||||| ||  |||||||||||||||| | ||||||| || |  |||| |||||||   |||||||| ||||| ||||    
T  25710628 aacactctctttatcactcactcttttattgtgtgaaatcaatgtatgtcctaccacttcgtatgagttctattttcaaagtgtagacccacaataattt 25710529  T
Q  200 aaatcaacaagaaagtgagtattagagagggtgtt 234  Q
    ||| ||| |||| | ||| ||||| |||| |||||    
T  25710528 aaaccaataagagaatgaatattaaagagagtgtt 25710494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 249
Target Start/End: Complemental strand, 1923668 - 1923559
Alignment:
Q  143 aatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagagggtgttcaaaa 239  Q
    |||||||||  |||||||||||||  |||||||||| |   |||||   |||||||||||||| ||| |||| | ||||||||||||| | |||||||||    
T  1923668 aatgtatgtcacaccactttgtgtgagttcaatttttaaagtgtagttttacaatgatttaaaccaataagataatgagtattagagatgatgttcaaaa 1923569  T
Q  240 gagagtgttg 249  Q
     |||||||||    
T  1923568 aagagtgttg 1923559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 166
Target Start/End: Original strand, 2525583 - 2525661
Alignment:
Q  88 caacactcaccttctaacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgt 166  Q
    |||||||||  || ||||||||||| ||||||||  | ||||| |||||||||||||||||| |  |||||||||||||    
T  2525583 caacactcattttttaacactctctttaacactcgtttttttattggatgaaatcaatgtatctatcaccactttgtgt 2525661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 14553573 - 14553664
Alignment:
Q  140 atcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagag 228  Q
    |||||||||||| | |||| |||  |||||||||||||| |   |||||||| ||||| | ||||| |||||||| ||||||||||||||||    
T  14553573 atcaatgtatgtcctaccattttacgttggttcaatttttaaagtgtagacccacaataaattaaaccaacaagagagtgagtattagagag 14553664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 249
Target Start/End: Original strand, 25919266 - 25919384
Alignment:
Q  134 gatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaagtgagtattagagaggg 230  Q
    |||||||||||| |||||  ||||| ||||||| || ||||||||||   |||||||  ||||||||||||| ||| || ||| ||| ||||| |||  |    
T  25919266 gatgaaatcaatatatgtctcaccattttgtgtgggatcaattttcaaagtgtagactcacaatgatttaaaccaataaaaaaatgaatattaaagaaag 25919365  T
Q  231 tgttcaaaagagagtgttg 249  Q
    | ||||||||||| |||||    
T  25919366 tattcaaaagagaatgttg 25919384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 1649574 - 1649621
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatg 150  Q
    |||||||||||||||||||||| | ||| |||||||||| ||||||||    
T  1649574 aacactctctctaacactcactatcttattggatgaaattaatgtatg 1649621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 13456315 - 13456244
Alignment:
Q  109 ctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    |||||||  |||||||||||||  ||||||||||||||||| | |||||| ||| ||| ||||| |||||||    
T  13456315 ctctctattactcactcttttatcggatgaaatcaatgtatttcccaccattttatgtgggttccattttca 13456244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 4959304 - 4959350
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgt 151  Q
    |||||||||||| || |||||||||| ||| ||||||||||||||||    
T  4959304 cactctctctaatacccactcttttattgggtgaaatcaatgtatgt 4959350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 6263909 - 6263966
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    ||||||||||| ||||||||| |||| ||| | |||||||| ||||| ||||||||||    
T  6263909 cactctctctatcactcactcctttattgggtaaaatcaatatatgtcccaccacttt 6263966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 43541875 - 43541952
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    |||||||||| ||| |||  |||||||| || || ||||||||||||||  || ||||||||||  ||||||||||||    
T  43541875 aacactctctttaatacttcctcttttattgaataaaatcaatgtatgtctcatcactttgtgtgagttcaattttca 43541952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 4959435 - 4959391
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtat 149  Q
    ||||||||||| |||||||||||||| |||  |||||||||||||    
T  4959435 cactctctctagcactcactcttttattgggggaaatcaatgtat 4959391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 140
Target Start/End: Original strand, 7584863 - 7584899
Alignment:
Q  104 acactctctctaacactcactcttttactggatgaaa 140  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  7584863 acactctctctaacactcattcttttattggatgaaa 7584899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 16875425 - 16875377
Alignment:
Q  99 ttctaacactctctctaacactcactcttttactggatgaaatcaatgt 147  Q
    |||||||||| ||||||||||||||||| ||| ||| | ||||||||||    
T  16875425 ttctaacactttctctaacactcactctcttattgggtaaaatcaatgt 16875377  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 17568855 - 17568799
Alignment:
Q  106 actctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccacttt 162  Q
    |||||| ||| |||||||||||||| ||  |||||||||| ||||| ||||||||||    
T  17568855 actctccctagcactcactcttttattgagtgaaatcaatttatgtcccaccacttt 17568799  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 31885963 - 31885885
Alignment:
Q  127 tttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaa 202  Q
    |||| ||||||||| ||||| |||| |||||| ||| ||  |||||||||||||   |||||| |||||||||||||||    
T  31885963 tttattggatgaaaacaatggatgtcccaccattttctggaggttcaattttcaaagtgtagatctacaatgatttaaa 31885885  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 32050461 - 32050413
Alignment:
Q  108 tctctctaacactcactcttttactggatgaaatcaatgtatgtgccac 156  Q
    |||||||| |||||||| ||||| ||| |||||||||||||||| ||||    
T  32050461 tctctctagcactcacttttttattgggtgaaatcaatgtatgttccac 32050413  T

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Target: scaffold0018 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 117 - 249
Target Start/End: Original strand, 27850 - 27985
Alignment:
Q  117 cactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca---tgtagacctacaatgatttaaatcaacaagaaa 213  Q
    ||||||| |||||| |||||| ||||||||||||| |||||||||||||| ||||| |||| ||   |||||||| ||||||||||||| ||| |||| |    
T  27850 cactcacgcttttattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagacccacaatgatttaaaccaataagaga 27949  T
Q  214 gtgagtattagagagggtgttcaaaagagagtgttg 249  Q
    |||||||||| |||| ||||||||||||| ||||||    
T  27950 gtgagtattaaagagagtgttcaaaagagggtgttg 27985  T

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Target: scaffold0543 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 9688 - 9763
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaatttt 178  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||| | |||||| ||||||| |||||||||||    
T  9688 aacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaatttt 9763  T

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Target: scaffold0492 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 11234 - 11309
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaatttt 178  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||| | |||||| ||||||| |||||||||||    
T  11234 aacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaatttt 11309  T

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Target: scaffold0204 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 27016 - 26941
Alignment:
Q  105 cactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgttggttcaattttca 180  Q
    |||||||| ||||||||||||| ||| ||||  |||||||||||||| |||||||||||||| |||||||||||||    
T  27016 cactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttca 26941  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 296860 - 296916
Alignment:
Q  103 aacactctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccac 159  Q
    |||||||||||||||||||||||| ||| |||||||||  | ||||||| |||||||    
T  296860 aacactctctctaacactcactctcttattggatgaaactagtgtatgtcccaccac 296916  T

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Target: scaffold0838 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 2251 - 2309
Alignment:
Q  108 tctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgt 166  Q
    |||||||| ||||||||||||||   ||||||||||||||||||  ||| |||||||||    
T  2251 tctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgtgt 2309  T

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Target: scaffold0832 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 2282 - 2340
Alignment:
Q  108 tctctctaacactcactcttttactggatgaaatcaatgtatgtgccaccactttgtgt 166  Q
    |||||||| ||||||||||||||   ||||||||||||||||||  ||| |||||||||    
T  2282 tctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgtgt 2340  T

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