View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15157_high_10 (Length: 289)
Name: NF15157_high_10
Description: NF15157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15157_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 48284997 - 48285269
Alignment:
| Q |
1 |
tacataatactagttcatcaatcaataaaagcaaacaagaattattgaagtatgcagcctcgttgaacagtttattttctctctctttaaatcccgactc |
100 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
48284997 |
tacataaaactagttcatcaatcaataaaagcaaacaagaattattgaagtatgcagcctcgttgaacagtttattctctctctctttaaatcccgactc |
48285096 |
T |
|
| Q |
101 |
agtttgcaaatcaagggaagaatggttttagttttctttatttctttttgaaaagaaagtgtgcaaccatccattcttcaccattattgtatccaaaaag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48285097 |
ggtttgcaaatcaagggaagaatggttttagttttctttatttctttttgaaaagaaagtgtgcaaccatccattcttcaccattattgtatccaaaaag |
48285196 |
T |
|
| Q |
201 |
ttctgccacagctatgaaaaatgttctccagtagacagtccatttggtagctgaatctttgccatatgttgat |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48285197 |
ttctgccacagctatgaaaaatgttctccagtagacagtccatttggtagctgaatctttgccatatgttgat |
48285269 |
T |
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