View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15157_low_26 (Length: 226)
Name: NF15157_low_26
Description: NF15157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15157_low_26 |
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Alignment Details
Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 41538040 - 41537887
Alignment:
| Q |
7 |
agaggagaagcaaaggtcaactaagaactgagaaccacaaagaaagtcaaacgcaagagatgcatcagaggaatttcatggtgaggagatagcggaccat |
106 |
Q |
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| T |
41538040 |
agagaagaaacaaaagtcaactaagaactgagaaccacaaagaaagtcaaacgcaagagatgcatcagaggaatttcatggtgaggagatagcggaccat |
41537941 |
T |
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| Q |
107 |
gagtataatagtgagtgctaaaacaatgatgttaatgttaaaataacaaaggat |
160 |
Q |
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| T |
41537940 |
aagtataatagtgagtgctaaaacaatgatgttaatgttaaaataacaaaggat |
41537887 |
T |
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